MD03G1059700.v1.1

UDP-glycosyltransferase 87A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000228
Physical Location & Seq
Reverse (-)
4818713 .. 4819887
1175 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1059700.v1.1.491

Sequence Viewer

Length: 939 bp
ATGATAACAAGAGGCCTTGCTACTTACGATAACCACTTTACATTGTTAACAGAGAAAGGAAACGAACGTGTGGACTACATTCCAGGAGTTTCTCCGACACGACTAGCGGACCTCCTCCAGTTTGTTTATGAAAGCAACCAAAAGATTCTAGGCCTTTTGTTAAACTCCTTATCTTGGGTACCTAAAGCACAATACATGTTATTCCCTGCCACCTTCCATGAACTTGAAACCCTAACCATCGACGTTTTACGATCAGAATTATCACTACCCATTTACACTATGGGCCCACCAATACCCTACTCCAAGGAAAATGACCTCCCTACCCCAGTTCCTAGTGATGATAGCTACTTCCAATGGTTAGACTCTCAACCTTGTAGCTCAGTTTTGTACATCGGCATGGGAAGTTTCCTTTCATTTTCTAGCGCCCAAATTGATGAGATCGCTGCCGGTTTGCGCAACAGCGGCGTTCGGTTCATTTGGGCGGCTCGCGGAGAATCCGAAAGGTTAAAGGAGGCTTGTGGGGACATGGGGTTGGTAGTGCCTTGGTGTGACCAATTGAGGGTTTTGCGCCATTCTAGTATTGGGGGGTTTTTGAGTCACTGTGGTTGGAACTCGGTTATGGAAGGTGTTTCTGCTGGTGTTATTTTTCTTACCTTACCTATACTTTACGATCAAGGAATGAATAGTAACCAGATTGTGGAGGAATGGAAGGTTGGGTGGAGGGTGAGGAAGATTGAGGACAAAATTGACCATTTGGTGACAAAAGAGGAGATTGCAGGCTTAATGAAGAAGTTTATGGATTTGGAGGATGATGAAGGGAAGGAAATGAGGAGGAGAGCTAGAGAACTTAAGCAGTTATGTCATGATGCCATTGCAGAAGGTGGATCATCCCATACCAACATCAAGGCCTTCATTAGAGATATTTCTCATAGGGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

313

Amino Acids

35.2

Weight (kDa)

5.44

Isoelectric Point (pI)

43.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 123 - 237 7.4e-17 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 455
Acc65I GGTACC 1 cut(s) 178
AccB1I GGYRCC 1 cut(s) 178
AccB7I CCANNNNNTGG 1 cut(s) 697
AccII CGCG 1 cut(s) 489
AciI CCGC 4 cut(s) 107, 462, 482, 489
AclWI GGATC 1 cut(s) 892
AfaI GTAC 2 cut(s) 180, 389
AfiI CCNNNNNNNGG 3 cut(s) 174, 559, 697
AflII CTTAAG 1 cut(s) 848
AflIII ACRYGT 2 cut(s) 67, 195
AgsI TTSAA 1 cut(s) 227
AjnI CCWGG 1 cut(s) 82
AjuI GAANNNNNNNTTGG 2 cut(s) 696, 728
AluBI AGCT 3 cut(s) 345, 378, 839
AluI AGCT 3 cut(s) 345, 378, 839
AlwI GGATC 1 cut(s) 892
AoxI GGCC 4 cut(s) 13, 151, 283, 906
ApaI GGGCCC 1 cut(s) 287
ApeKI GCWGC 1 cut(s) 443
Asp718I GGTACC 1 cut(s) 178
AspLEI GCGC 3 cut(s) 425, 456, 570
AspS9I GGNCC 3 cut(s) 109, 283, 284
AsuHPI GGTGA 2 cut(s) 736, 769
AvaII GGWCC 1 cut(s) 109
BaeGI GKGCMC 1 cut(s) 287
BanI GGYRCC 1 cut(s) 178
BanII GRGCYC 1 cut(s) 287
BbvI GCAGC 1 cut(s) 430
BccI CCATC 1 cut(s) 245
BciT130I CCWGG 1 cut(s) 84
BfaI CTAG 6 cut(s) 104, 149, 333, 420, 576, 840
BfoI RGCGCY 1 cut(s) 426
BfrI CTTAAG 1 cut(s) 848
BisI GCNGC 3 cut(s) 444, 463, 483
BlsI GCNGC 3 cut(s) 445, 464, 484
Bme1390I CCNGG 1 cut(s) 84
Bme18I GGWCC 1 cut(s) 109
BmgT120I GGNCC 3 cut(s) 109, 283, 284
BmiI GGNNCC 2 cut(s) 180, 285
BmrFI CCNGG 1 cut(s) 84
BmrI ACTGGG 1 cut(s) 320
BmsI GCATC 1 cut(s) 856
BmuI ACTGGG 1 cut(s) 320
BpmI CTGGAG 1 cut(s) 101
BsaJI CCNNGG 2 cut(s) 303, 542
Bsc4I CCNNNNNNNGG 3 cut(s) 174, 559, 697
Bse118I RCCGGY 1 cut(s) 446
Bse1I ACTGG 2 cut(s) 118, 326
Bse3DI GCAATG 1 cut(s) 870
BseBI CCWGG 1 cut(s) 84
BseDI CCNNGG 2 cut(s) 303, 542
BseGI GGATG 2 cut(s) 814, 887
BseLI CCNNNNNNNGG 3 cut(s) 174, 559, 697
BseMI GCAATG 1 cut(s) 870
BseMII CTCAG 1 cut(s) 393
BseNI ACTGG 2 cut(s) 118, 326
BseRI GAGGAG 4 cut(s) 104, 782, 844, 847
BseSI GKGCMC 1 cut(s) 287
BseXI GCAGC 1 cut(s) 430
Bsh1236I CGCG 1 cut(s) 489
BshFI GGCC 4 cut(s) 15, 153, 285, 908
BshNI GGYRCC 1 cut(s) 178
BsiSI CCGG 1 cut(s) 447
BslFI GGGAC 1 cut(s) 536
BslI CCNNNNNNNGG 3 cut(s) 174, 559, 697
BsmFI GGGAC 1 cut(s) 536
BsnI GGCC 4 cut(s) 15, 153, 285, 908
Bsp120I GGGCCC 1 cut(s) 283
Bsp1286I GDGCHC 1 cut(s) 287
Bsp1407I TGTACA 1 cut(s) 387
Bsp143I GATC 4 cut(s) 251, 438, 670, 884
BspACI CCGC 4 cut(s) 107, 462, 482, 489
BspANI GGCC 4 cut(s) 15, 153, 285, 908
BspCNI CTCAG 1 cut(s) 392
BspFNI CGCG 1 cut(s) 489
BspHI TCATGA 1 cut(s) 862
BspLI GGNNCC 2 cut(s) 180, 285
BspPI GGATC 1 cut(s) 892
BspT107I GGYRCC 1 cut(s) 178
BspTI CTTAAG 1 cut(s) 848
BsrDI GCAATG 1 cut(s) 870
BsrFI RCCGGY 1 cut(s) 446
BsrGI TGTACA 1 cut(s) 387
BsrI ACTGG 2 cut(s) 118, 326
BssAI RCCGGY 1 cut(s) 446
BssECI CCNNGG 2 cut(s) 303, 542
BssMI GATC 4 cut(s) 251, 438, 670, 884
BssT1I CCWWGG 2 cut(s) 303, 542
Bst2UI CCWGG 1 cut(s) 84
Bst4CI ACNGT 1 cut(s) 602
BstAFI CTTAAG 1 cut(s) 848
BstAUI TGTACA 1 cut(s) 387
BstC8I GCNNGC 2 cut(s) 487, 778
BstDEI CTNAG 1 cut(s) 379
BstF5I GGATG 2 cut(s) 814, 887
BstFNI CGCG 1 cut(s) 489
BstH2I RGCGCY 1 cut(s) 426
BstHHI GCGC 3 cut(s) 425, 456, 570
BstKTI GATC 4 cut(s) 254, 441, 673, 887
BstMBI GATC 4 cut(s) 251, 438, 670, 884
BstMWI GCNNNNNNNGC 1 cut(s) 462
BstNI CCWGG 1 cut(s) 84
BstNSI RCATGY 1 cut(s) 199
BstSCI CCNGG 1 cut(s) 82
BstSLI GKGCMC 1 cut(s) 287
BstUI CGCG 1 cut(s) 489
BstV1I GCAGC 1 cut(s) 430
BsuRI GGCC 4 cut(s) 15, 153, 285, 908
BtsCI GGATG 2 cut(s) 814, 887
BtsIMutI CAGTG 1 cut(s) 598
Cac8I GCNNGC 2 cut(s) 487, 778
CciI TCATGA 1 cut(s) 862
CfoI GCGC 3 cut(s) 425, 456, 570
Cfr10I RCCGGY 1 cut(s) 446
Cfr13I GGNCC 3 cut(s) 109, 283, 284
Csp6I GTAC 2 cut(s) 179, 388
CviAII CATG 5 cut(s) 196, 218, 397, 526, 863
CviQI GTAC 2 cut(s) 179, 388
DdeI CTNAG 1 cut(s) 379
DpnI GATC 4 cut(s) 253, 440, 672, 886
DpnII GATC 4 cut(s) 251, 438, 670, 884
Eco130I CCWWGG 2 cut(s) 303, 542
Eco147I AGGCCT 3 cut(s) 15, 153, 908
Eco24I GRGCYC 1 cut(s) 287
Eco47I GGWCC 1 cut(s) 109
EcoRII CCWGG 1 cut(s) 82
EcoT14I CCWWGG 2 cut(s) 303, 542
EcoT38I GRGCYC 1 cut(s) 287
ErhI CCWWGG 2 cut(s) 303, 542
FaeI CATG 5 cut(s) 199, 221, 400, 529, 866
FaqI GGGAC 1 cut(s) 536
FatI CATG 5 cut(s) 195, 217, 396, 525, 862
Fnu4HI GCNGC 3 cut(s) 444, 463, 483
FokI GGATG 2 cut(s) 821, 874
FriOI GRGCYC 1 cut(s) 287
Fsp4HI GCNGC 3 cut(s) 444, 463, 483
FspBI CTAG 6 cut(s) 104, 149, 333, 420, 576, 840
FspI TGCGCA 1 cut(s) 455
GlaI GCGC 3 cut(s) 424, 455, 569
GluI GCNGC 3 cut(s) 444, 463, 483
GsuI CTGGAG 1 cut(s) 101
HaeII RGCGCY 1 cut(s) 426
HaeIII GGCC 4 cut(s) 15, 153, 285, 908
HapII CCGG 1 cut(s) 447
HhaI GCGC 3 cut(s) 425, 456, 570
Hin1II CATG 5 cut(s) 199, 221, 400, 529, 866
Hin6I GCGC 3 cut(s) 423, 454, 568
HinP1I GCGC 3 cut(s) 423, 454, 568
HincII GTYRAC 1 cut(s) 48
HindII GTYRAC 1 cut(s) 48
HinfI GANTC 4 cut(s) 145, 362, 494, 595
HpaI GTTAAC 1 cut(s) 48
HpaII CCGG 1 cut(s) 447
HphI GGTGA 2 cut(s) 736, 769
Hpy166II GTNNAC 2 cut(s) 48, 73
Hpy188I TCNGA 3 cut(s) 96, 256, 499
Hpy188III TCNNGA 1 cut(s) 863
Hpy8I GTNNAC 2 cut(s) 48, 73
Hpy99I CGWCG 1 cut(s) 245
HpyAV CCTTC 7 cut(s) 223, 617, 703, 809, 814, 872, 919
HpyCH4III ACNGT 1 cut(s) 602
HpyCH4IV ACGT 2 cut(s) 67, 243
HpyCH4V TGCA 2 cut(s) 776, 875
HpyF10VI GCNNNNNNNGC 1 cut(s) 462
HpyF3I CTNAG 1 cut(s) 379
HpySE526I ACGT 2 cut(s) 67, 243
Hsp92II CATG 5 cut(s) 199, 221, 400, 529, 866
HspAI GCGC 3 cut(s) 423, 454, 568
KpnI GGTACC 1 cut(s) 182
KspAI GTTAAC 1 cut(s) 48
Kzo9I GATC 4 cut(s) 251, 438, 670, 884
LpnPI CCDG 9 cut(s) 69, 96, 131, 219, 339, 460, 621, 704, 762
Lsp1109I GCAGC 1 cut(s) 430
LweI GCATC 1 cut(s) 856
MaeI CTAG 6 cut(s) 104, 149, 333, 420, 576, 840
MaeII ACGT 2 cut(s) 67, 243
MaeIII GTNAC 4 cut(s) 548, 596, 686, 757
MalI GATC 4 cut(s) 253, 440, 672, 886
MboI GATC 4 cut(s) 251, 438, 670, 884
MboII GAAGA 2 cut(s) 742, 799
MfeI CAATTG 1 cut(s) 554
MhlI GDGCHC 1 cut(s) 287
MluCI AATT 4 cut(s) 257, 429, 554, 744
MlyI GAGTC 2 cut(s) 356, 604
MmeI TCCRAC 2 cut(s) 119, 587
MseI TTAA 5 cut(s) 47, 161, 506, 782, 849
MslI CAYNNNNRTG 1 cut(s) 395
MspA1I CMGCKG 1 cut(s) 462
MspCI CTTAAG 1 cut(s) 848
MspI CCGG 1 cut(s) 447
MspR9I CCNGG 1 cut(s) 84
MunI CAATTG 1 cut(s) 554
MvaI CCWGG 1 cut(s) 84
MvnI CGCG 1 cut(s) 489
MwoI GCNNNNNNNGC 1 cut(s) 462
NdeII GATC 4 cut(s) 251, 438, 670, 884
NlaIII CATG 5 cut(s) 199, 221, 400, 529, 866
NlaIV GGNNCC 2 cut(s) 180, 285
NmuCI GTSAC 3 cut(s) 548, 596, 757
NsbI TGCGCA 1 cut(s) 455
NspI RCATGY 1 cut(s) 199
PagI TCATGA 1 cut(s) 862
PceI AGGCCT 3 cut(s) 15, 153, 908
PciI ACATGT 1 cut(s) 195
PfeI GAWTC 2 cut(s) 145, 494
PflMI CCANNNNNTGG 1 cut(s) 697
PfoI TCCNGGA 1 cut(s) 82
PkrI GCNGC 3 cut(s) 445, 464, 484
PleI GAGTC 2 cut(s) 356, 603
PpsI GAGTC 2 cut(s) 356, 603
PscI ACATGT 1 cut(s) 195
Psp6I CCWGG 1 cut(s) 82
PspGI CCWGG 1 cut(s) 82
PspN4I GGNNCC 2 cut(s) 180, 285
PspOMI GGGCCC 1 cut(s) 283
PspPI GGNCC 3 cut(s) 109, 283, 284
RsaI GTAC 2 cut(s) 180, 389
RsaNI GTAC 2 cut(s) 179, 388
RseI CAYNNNNRTG 1 cut(s) 395
SaqAI TTAA 5 cut(s) 47, 161, 506, 782, 849
SatI GCNGC 3 cut(s) 444, 463, 483
Sau3AI GATC 4 cut(s) 251, 438, 670, 884
Sau96I GGNCC 3 cut(s) 109, 283, 284
SchI GAGTC 2 cut(s) 356, 604
ScrFI CCNGG 1 cut(s) 84
SduI GDGCHC 1 cut(s) 287
SfaNI GCATC 1 cut(s) 856
SinI GGWCC 1 cut(s) 109
SmiMI CAYNNNNRTG 1 cut(s) 395
SmlI CTYRAG 1 cut(s) 848
SmoI CTYRAG 1 cut(s) 848
Sse9I AATT 4 cut(s) 257, 429, 554, 744
SseBI AGGCCT 3 cut(s) 15, 153, 908
SsiI CCGC 4 cut(s) 107, 462, 482, 489
SspMI CTAG 6 cut(s) 104, 149, 333, 420, 576, 840
StuI AGGCCT 3 cut(s) 15, 153, 908
StyD4I CCNGG 1 cut(s) 82
StyI CCWWGG 2 cut(s) 303, 542
TaaI ACNGT 1 cut(s) 602
TaiI ACGT 2 cut(s) 70, 246
TaqI TCGA 1 cut(s) 240
TasI AATT 4 cut(s) 257, 429, 554, 744
TatI WGTACW 1 cut(s) 387
TauI GCSGC 2 cut(s) 465, 485
TfiI GAWTC 2 cut(s) 145, 494
Tru1I TTAA 5 cut(s) 47, 161, 506, 782, 849
Tru9I TTAA 5 cut(s) 47, 161, 506, 782, 849
TscAI CASTG 1 cut(s) 605
TseFI GTSAC 3 cut(s) 548, 596, 757
TseI GCWGC 1 cut(s) 443
Tsp45I GTSAC 3 cut(s) 548, 596, 757
TspDTI ATGAA 8 cut(s) 144, 234, 402, 463, 695, 800, 828, 901
TspRI CASTG 1 cut(s) 605
Van91I CCANNNNNTGG 1 cut(s) 697
Vha464I CTTAAG 1 cut(s) 848
VpaK11BI GGWCC 1 cut(s) 109
XceI RCATGY 1 cut(s) 199
XcmI CCANNNNNNNNNTGG 2 cut(s) 277, 578
XspI CTAG 6 cut(s) 104, 149, 333, 420, 576, 840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.