Rmu_co8352537.1_g000001

UDP-glycosyltransferase 87A1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8352537.1
Physical Location & Seq
Reverse (-)
271 .. 804
534 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8352537.1_g000001.1.cds

Sequence Viewer

Length: 534 bp
atgggaagctttttgtcagtttctagtgcccaaatggatgagattgcagctggtttgcacaaaagcggtgtccggttcttctgggtaactcgtggtgataccggtaggttacgagaggtttgtggtgataaggggttagtggtgccgtggtgtgaccaattgagtttgttgaaccattcttgcatagggggtttcttgacacattgtgggtggaactcagttaaagaaggtgtttccgccggtattccttttcttacctttccattaaatatagatcaaggtatgaatgggaaggcgattgtggaggattggaagattgggtggagggtgaagagtactgaggctaaaatagatcatttggtgacgagcgaggaaattgcagggttggtgaagaaatttatggatttggaggacggggaagggaaagacatgaggagaagagccagagagtttcagcagatatgtcatggtgcaattgcagagggtggatcatctgaaagtaacattagcaccttcattagtgacatttgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

177

Amino Acids

19.38

Weight (kDa)

5.72

Isoelectric Point (pI)

39.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 142
AciI CCGC 2 cut(s) 66, 237
AclWI GGATC 1 cut(s) 496
AcsI RAATTY 1 cut(s) 395
AdeI CACNNNGTG 1 cut(s) 206
AfaI GTAC 1 cut(s) 337
AgeI ACCGGT 1 cut(s) 101
AgsI TTSAA 1 cut(s) 172
AluBI AGCT 2 cut(s) 9, 50
AluI AGCT 2 cut(s) 9, 50
AlwI GGATC 1 cut(s) 496
ApeKI GCWGC 1 cut(s) 47
ApoI RAATTY 1 cut(s) 395
ArsI GACNNNNNNTTYG 2 cut(s) 54, 86
AsiGI ACCGGT 1 cut(s) 101
AsuHPI GGTGA 5 cut(s) 107, 137, 340, 373, 400
BaeGI GKGCMC 1 cut(s) 31
BanI GGYRCC 1 cut(s) 142
BauI CACGAG 1 cut(s) 90
BbvI GCAGC 1 cut(s) 59
BceAI ACGGC 1 cut(s) 130
BcgI CGANNNNNNTGC 2 cut(s) 359, 393
BfaI CTAG 1 cut(s) 24
BisI GCNGC 1 cut(s) 48
BlsI GCNGC 1 cut(s) 49
BmcAI AGTACT 1 cut(s) 337
BmiI GGNNCC 1 cut(s) 144
BsaJI CCNNGG 1 cut(s) 146
BsaWI WCCGGW 2 cut(s) 72, 101
Bse118I RCCGGY 2 cut(s) 101, 239
BseDI CCNNGG 1 cut(s) 146
BseGI GGATG 1 cut(s) 43
BseMII CTCAG 2 cut(s) 231, 330
BseRI GAGGAG 1 cut(s) 448
BseSI GKGCMC 1 cut(s) 31
BseXI GCAGC 1 cut(s) 59
BshNI GGYRCC 1 cut(s) 142
BshTI ACCGGT 1 cut(s) 101
BsiSI CCGG 3 cut(s) 73, 102, 240
Bsp1286I GDGCHC 1 cut(s) 31
Bsp143I GATC 3 cut(s) 274, 352, 488
BspACI CCGC 2 cut(s) 66, 237
BspCNI CTCAG 2 cut(s) 230, 331
BspLI GGNNCC 1 cut(s) 144
BspPI GGATC 1 cut(s) 496
BspQI GCTCTTC 1 cut(s) 433
BspT107I GGYRCC 1 cut(s) 142
BsrFI RCCGGY 2 cut(s) 101, 239
BssAI RCCGGY 2 cut(s) 101, 239
BssECI CCNNGG 1 cut(s) 146
BssMI GATC 3 cut(s) 274, 352, 488
BssSI CACGAG 1 cut(s) 90
Bst2BI CACGAG 1 cut(s) 90
Bst6I CTCTTC 2 cut(s) 326, 433
BstDEI CTNAG 2 cut(s) 217, 339
BstDSI CCRYGG 1 cut(s) 146
BstF5I GGATG 1 cut(s) 43
BstKTI GATC 3 cut(s) 277, 355, 491
BstMBI GATC 3 cut(s) 274, 352, 488
BstSLI GKGCMC 1 cut(s) 31
BstV1I GCAGC 1 cut(s) 59
BtgI CCRYGG 1 cut(s) 146
BtsCI GGATG 1 cut(s) 43
Cfr10I RCCGGY 2 cut(s) 101, 239
Csp6I GTAC 1 cut(s) 336
CspAI ACCGGT 1 cut(s) 101
CviAII CATG 2 cut(s) 430, 467
CviJI RGCY 4 cut(s) 9, 50, 344, 443
CviKI_1 RGCY 4 cut(s) 9, 50, 344, 443
CviQI GTAC 1 cut(s) 336
DdeI CTNAG 2 cut(s) 217, 339
DpnI GATC 3 cut(s) 276, 354, 490
DpnII GATC 3 cut(s) 274, 352, 488
DraIII CACNNNGTG 1 cut(s) 206
Eam1104I CTCTTC 2 cut(s) 326, 433
EarI CTCTTC 2 cut(s) 326, 433
EciI GGCGGA 1 cut(s) 226
FaeI CATG 2 cut(s) 433, 470
FaiI YATR 7 cut(s) 185, 272, 284, 401, 431, 463, 468
FatI CATG 2 cut(s) 429, 466
Fnu4HI GCNGC 1 cut(s) 48
FokI GGATG 1 cut(s) 50
Fsp4HI GCNGC 1 cut(s) 48
FspBI CTAG 1 cut(s) 24
GluI GCNGC 1 cut(s) 48
HapII CCGG 3 cut(s) 73, 102, 240
Hin1II CATG 2 cut(s) 433, 470
HindIII AAGCTT 1 cut(s) 7
HpaII CCGG 3 cut(s) 73, 102, 240
HphI GGTGA 5 cut(s) 107, 137, 340, 373, 400
Hpy188I TCNGA 1 cut(s) 496
Hpy188III TCNNGA 1 cut(s) 196
HpyAV CCTTC 4 cut(s) 221, 286, 413, 523
HpyCH4V TGCA 6 cut(s) 47, 58, 183, 380, 473, 479
HpyF3I CTNAG 2 cut(s) 217, 339
Hsp92II CATG 2 cut(s) 433, 470
Kzo9I GATC 3 cut(s) 274, 352, 488
LguI GCTCTTC 1 cut(s) 433
LpnPI CCDG 7 cut(s) 36, 67, 86, 115, 253, 366, 457
Lsp1109I GCAGC 1 cut(s) 59
MaeI CTAG 1 cut(s) 24
MaeIII GTNAC 6 cut(s) 85, 108, 152, 361, 500, 521
MalI GATC 3 cut(s) 276, 354, 490
MboI GATC 3 cut(s) 274, 352, 488
MboII GAAGA 5 cut(s) 70, 325, 343, 403, 450
MfeI CAATTG 2 cut(s) 158, 474
MhlI GDGCHC 1 cut(s) 31
MluCI AATT 4 cut(s) 158, 375, 395, 474
MnlI CCTC 8 cut(s) 109, 298, 318, 334, 364, 403, 426, 475
MseI TTAA 3 cut(s) 222, 266, 532
MspA1I CMGCKG 1 cut(s) 50
MspI CCGG 3 cut(s) 73, 102, 240
MunI CAATTG 2 cut(s) 158, 474
NdeII GATC 3 cut(s) 274, 352, 488
NlaIII CATG 2 cut(s) 433, 470
NlaIV GGNNCC 1 cut(s) 144
NmuCI GTSAC 3 cut(s) 152, 361, 521
PciSI GCTCTTC 1 cut(s) 433
PinAI ACCGGT 1 cut(s) 101
PkrI GCNGC 1 cut(s) 49
PspN4I GGNNCC 1 cut(s) 144
PvuII CAGCTG 1 cut(s) 50
RsaI GTAC 1 cut(s) 337
RsaNI GTAC 1 cut(s) 336
SapI GCTCTTC 1 cut(s) 433
SaqAI TTAA 3 cut(s) 222, 266, 532
SatI GCNGC 1 cut(s) 48
Sau3AI GATC 3 cut(s) 274, 352, 488
ScaI AGTACT 1 cut(s) 337
SduI GDGCHC 1 cut(s) 31
SetI ASST 8 cut(s) 11, 52, 110, 120, 232, 260, 283, 515
Sse9I AATT 4 cut(s) 158, 375, 395, 474
SsiI CCGC 2 cut(s) 66, 237
SspMI CTAG 1 cut(s) 24
TasI AATT 4 cut(s) 158, 375, 395, 474
TatI WGTACW 1 cut(s) 335
Tru1I TTAA 3 cut(s) 222, 266, 532
Tru9I TTAA 3 cut(s) 222, 266, 532
TseFI GTSAC 3 cut(s) 152, 361, 521
TseI GCWGC 1 cut(s) 47
Tsp45I GTSAC 3 cut(s) 152, 361, 521
TspDTI ATGAA 2 cut(s) 299, 505
XapI RAATTY 1 cut(s) 395
XspI CTAG 1 cut(s) 24
ZrmI AGTACT 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.