Rmu_sc0009988.1_g000008

UDP-glycosyltransferase 87A1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009988.1
Physical Location & Seq
Reverse (-)
29438 .. 29857
420 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009988.1_g000008.1.cds

Sequence Viewer

Length: 420 bp
atggggttagttgttccctggtgtgaccagtttagagtgttgtgccattcttctgttggtgggtattggtcacattgtggatggaactcagttagagaaggtgtttttggaggtgttccttttcttacctttaccataactttcgatcaaggtacaaatagtaaggtggttgtggaggattggaaaattgggtggagggtgaagagtactgaggtgaaaatcgaccatttggtgacaagtgaggaaattgcagtgttagtgaaaaaatttatggatttggaggatgatgaagggaaagaattgagaaggagaacaagtcaactccaacagatatggaaaggtgccattgcagaaggcggttcaactaaaactgacatcaatgcgttcattagagacatttcacagagccttgagggttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

139

Amino Acids

15.67

Weight (kDa)

5.6

Isoelectric Point (pI)

46.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 341
AciI CCGC 1 cut(s) 357
AcsI RAATTY 1 cut(s) 266
AdeI CACNNNGTG 1 cut(s) 77
AfaI GTAC 2 cut(s) 154, 208
AgsI TTSAA 1 cut(s) 363
AjnI CCWGG 1 cut(s) 17
AjuI GAANNNNNNNTTGG 2 cut(s) 90, 122
Alw26I GTCTC 1 cut(s) 387
ApoI RAATTY 1 cut(s) 266
AsuHPI GGTGA 3 cut(s) 211, 226, 244
BanI GGYRCC 1 cut(s) 341
BccI CCATC 1 cut(s) 75
BciT130I CCWGG 1 cut(s) 19
BcoDI GTCTC 1 cut(s) 387
BmcAI AGTACT 1 cut(s) 208
Bme1390I CCNGG 1 cut(s) 19
BmiI GGNNCC 1 cut(s) 343
BmrFI CCNGG 1 cut(s) 19
BsaJI CCNNGG 1 cut(s) 17
BsaXI ACNNNNNCTCC 2 cut(s) 301, 331
Bse1I ACTGG 1 cut(s) 28
Bse3DI GCAATG 1 cut(s) 345
BseBI CCWGG 1 cut(s) 19
BseDI CCNNGG 1 cut(s) 17
BseGI GGATG 2 cut(s) 86, 289
BseMI GCAATG 1 cut(s) 345
BseMII CTCAG 2 cut(s) 102, 201
BseNI ACTGG 1 cut(s) 28
BshNI GGYRCC 1 cut(s) 341
BsmAI GTCTC 1 cut(s) 387
Bsp143I GATC 1 cut(s) 145
BspACI CCGC 1 cut(s) 357
BspCNI CTCAG 2 cut(s) 101, 202
BspLI GGNNCC 1 cut(s) 343
BspT107I GGYRCC 1 cut(s) 341
BsrDI GCAATG 1 cut(s) 345
BsrI ACTGG 1 cut(s) 28
BssECI CCNNGG 1 cut(s) 17
BssMI GATC 1 cut(s) 145
Bst2UI CCWGG 1 cut(s) 19
Bst6I CTCTTC 1 cut(s) 197
BstDEI CTNAG 2 cut(s) 88, 210
BstF5I GGATG 2 cut(s) 86, 289
BstKTI GATC 1 cut(s) 148
BstMAI GTCTC 1 cut(s) 387
BstMBI GATC 1 cut(s) 145
BstNI CCWGG 1 cut(s) 19
BstSCI CCNGG 1 cut(s) 17
BtsCI GGATG 2 cut(s) 86, 289
BtsI GCAGTG 1 cut(s) 258
BtsIMutI CAGTG 1 cut(s) 258
Csp6I GTAC 2 cut(s) 153, 207
CviJI RGCY 1 cut(s) 408
CviKI_1 RGCY 1 cut(s) 408
CviQI GTAC 2 cut(s) 153, 207
DdeI CTNAG 2 cut(s) 88, 210
DpnI GATC 1 cut(s) 147
DpnII GATC 1 cut(s) 145
DraIII CACNNNGTG 1 cut(s) 77
Eam1104I CTCTTC 1 cut(s) 197
EarI CTCTTC 1 cut(s) 197
EcoRII CCWGG 1 cut(s) 17
FaiI YATR 3 cut(s) 137, 272, 334
FokI GGATG 2 cut(s) 93, 296
HincII GTYRAC 1 cut(s) 320
HindII GTYRAC 1 cut(s) 320
HphI GGTGA 3 cut(s) 211, 226, 244
Hpy166II GTNNAC 1 cut(s) 320
Hpy8I GTNNAC 1 cut(s) 320
HpyAV CCTTC 4 cut(s) 92, 284, 300, 347
HpyCH4V TGCA 2 cut(s) 251, 350
HpyF3I CTNAG 2 cut(s) 88, 210
Kzo9I GATC 1 cut(s) 145
LpnPI CCDG 3 cut(s) 4, 31, 41
MaeIII GTNAC 3 cut(s) 23, 69, 232
MalI GATC 1 cut(s) 147
MboI GATC 1 cut(s) 145
MboII GAAGA 2 cut(s) 42, 214
MluCI AATT 4 cut(s) 186, 246, 266, 299
MmeI TCCRAC 1 cut(s) 349
MnlI CCTC 7 cut(s) 104, 169, 189, 205, 235, 274, 406
MseI TTAA 1 cut(s) 418
MspR9I CCNGG 1 cut(s) 19
MvaI CCWGG 1 cut(s) 19
NdeII GATC 1 cut(s) 145
NlaIV GGNNCC 1 cut(s) 343
NmuCI GTSAC 3 cut(s) 23, 69, 232
Psp6I CCWGG 1 cut(s) 17
PspGI CCWGG 1 cut(s) 17
PspN4I GGNNCC 1 cut(s) 343
RsaI GTAC 2 cut(s) 154, 208
RsaNI GTAC 2 cut(s) 153, 207
SaqAI TTAA 1 cut(s) 418
Sau3AI GATC 1 cut(s) 145
ScaI AGTACT 1 cut(s) 208
ScrFI CCNGG 1 cut(s) 19
SetI ASST 7 cut(s) 103, 115, 131, 154, 168, 216, 343
SgeI CNNG 6 cut(s) 30, 31, 40, 161, 249, 327
SmlI CTYRAG 1 cut(s) 410
SmoI CTYRAG 1 cut(s) 410
Sse9I AATT 4 cut(s) 186, 246, 266, 299
SsiI CCGC 1 cut(s) 357
StyD4I CCNGG 1 cut(s) 17
TaqI TCGA 2 cut(s) 144, 222
TasI AATT 4 cut(s) 186, 246, 266, 299
TatI WGTACW 1 cut(s) 206
Tru1I TTAA 1 cut(s) 418
Tru9I TTAA 1 cut(s) 418
TscAI CASTG 1 cut(s) 258
TseFI GTSAC 3 cut(s) 23, 69, 232
Tsp45I GTSAC 3 cut(s) 23, 69, 232
TspDTI ATGAA 2 cut(s) 303, 376
TspRI CASTG 1 cut(s) 258
XapI RAATTY 1 cut(s) 266
XcmI CCANNNNNNNNNTGG 1 cut(s) 53
ZrmI AGTACT 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.