Rroxscaffold_7G00203790

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
52724370 .. 52725104
735 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00203790.1

Sequence Viewer

Length: 324 bp
ATGGTACGGGTCAAGATTAAAATTGAAAGTTTACTGTTTGAGCCCATTCCGAGAAAACGGGCCCGTGGGATTCGGTTCTTAAGGGTTGCTAGGGGAGAAAGTGCTAGGTTGAAAGAGAGGTGTGGTGATATGGGGTTAGTGGTGCCATGGTGTGATCAATTGAAGGTGTTGTGGCGTCATTCTTCCGTTGGTGGTTTTTGGACTCATTGCGGGTGGAACTCGACTGCGGAATCCGTGTTTTCTAGTGTTCCAATGCTTACTTCCCCTTCGGCTTTTGATCAATTTCCTAACAATAGGCGAATTGTTGAAGAGGTGGAAGGTTGA

Protein Analysis

107

Amino Acids

12.25

Weight (kDa)

9.91

Isoelectric Point (pI)

46.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 44 - 102 1.5e-08 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 142
AciI CCGC 2 cut(s) 210, 227
AcyI GRCGYC 1 cut(s) 175
AfaI GTAC 1 cut(s) 6
AflII CTTAAG 1 cut(s) 79
AgsI TTSAA 4 cut(s) 26, 112, 163, 308
AjuI GAANNNNNNNTTGG 2 cut(s) 244, 276
AoxI GGCC 1 cut(s) 60
ApaI GGGCCC 1 cut(s) 64
AspS9I GGNCC 2 cut(s) 60, 61
AsuHPI GGTGA 1 cut(s) 137
BaeGI GKGCMC 1 cut(s) 64
BanI GGYRCC 1 cut(s) 142
BanII GRGCYC 2 cut(s) 45, 64
BclI TGATCA 2 cut(s) 154, 277
BfaI CTAG 3 cut(s) 90, 105, 243
BfrI CTTAAG 1 cut(s) 79
BmgT120I GGNCC 2 cut(s) 60, 61
BmiI GGNNCC 2 cut(s) 62, 144
BsaHI GRCGYC 1 cut(s) 175
BsaJI CCNNGG 2 cut(s) 64, 146
Bse3DI GCAATG 1 cut(s) 205
BseDI CCNNGG 2 cut(s) 64, 146
BseMI GCAATG 1 cut(s) 205
BseSI GKGCMC 1 cut(s) 64
BshFI GGCC 1 cut(s) 62
BshNI GGYRCC 1 cut(s) 142
BsnI GGCC 1 cut(s) 62
Bsp120I GGGCCC 1 cut(s) 60
Bsp1286I GDGCHC 2 cut(s) 45, 64
Bsp143I GATC 2 cut(s) 154, 277
Bsp19I CCATGG 1 cut(s) 146
BspACI CCGC 2 cut(s) 210, 227
BspANI GGCC 1 cut(s) 62
BspLI GGNNCC 2 cut(s) 62, 144
BspT107I GGYRCC 1 cut(s) 142
BspTI CTTAAG 1 cut(s) 79
BsrDI GCAATG 1 cut(s) 205
BssECI CCNNGG 2 cut(s) 64, 146
BssMI GATC 2 cut(s) 154, 277
BssNI GRCGYC 1 cut(s) 175
BssT1I CCWWGG 1 cut(s) 146
Bst4CI ACNGT 1 cut(s) 36
Bst6I CTCTTC 1 cut(s) 303
BstACI GRCGYC 1 cut(s) 175
BstAFI CTTAAG 1 cut(s) 79
BstDSI CCRYGG 2 cut(s) 64, 146
BstKTI GATC 2 cut(s) 157, 280
BstMBI GATC 2 cut(s) 154, 277
BstSLI GKGCMC 1 cut(s) 64
BsuRI GGCC 1 cut(s) 62
BtgI CCRYGG 2 cut(s) 64, 146
Cfr13I GGNCC 2 cut(s) 60, 61
CseI GACGC 1 cut(s) 164
Csp6I GTAC 1 cut(s) 5
CviAII CATG 1 cut(s) 147
CviJI RGCY 3 cut(s) 43, 62, 272
CviKI_1 RGCY 3 cut(s) 43, 62, 272
CviQI GTAC 1 cut(s) 5
DpnI GATC 2 cut(s) 156, 279
DpnII GATC 2 cut(s) 154, 277
Eam1104I CTCTTC 1 cut(s) 303
EarI CTCTTC 1 cut(s) 303
Eco130I CCWWGG 1 cut(s) 146
Eco24I GRGCYC 2 cut(s) 45, 64
EcoT14I CCWWGG 1 cut(s) 146
EcoT38I GRGCYC 2 cut(s) 45, 64
ErhI CCWWGG 1 cut(s) 146
FaeI CATG 1 cut(s) 150
FaiI YATR 2 cut(s) 131, 148
FatI CATG 1 cut(s) 146
FauI CCCGC 1 cut(s) 203
FbaI TGATCA 2 cut(s) 154, 277
FriOI GRGCYC 2 cut(s) 45, 64
FspBI CTAG 3 cut(s) 90, 105, 243
HaeIII GGCC 1 cut(s) 62
HgaI GACGC 1 cut(s) 164
Hin1I GRCGYC 1 cut(s) 175
Hin1II CATG 1 cut(s) 150
HinfI GANTC 3 cut(s) 70, 202, 230
HphI GGTGA 1 cut(s) 137
Hpy166II GTNNAC 1 cut(s) 32
Hpy188I TCNGA 1 cut(s) 51
Hpy188III TCNNGA 1 cut(s) 13
Hpy8I GTNNAC 1 cut(s) 32
HpyAV CCTTC 3 cut(s) 157, 276, 311
HpyCH4III ACNGT 1 cut(s) 36
Hsp92I GRCGYC 1 cut(s) 175
Hsp92II CATG 1 cut(s) 150
Ksp22I TGATCA 2 cut(s) 154, 277
Kzo9I GATC 2 cut(s) 154, 277
MaeI CTAG 3 cut(s) 90, 105, 243
MalI GATC 2 cut(s) 156, 279
MboI GATC 2 cut(s) 154, 277
MboII GAAGA 2 cut(s) 174, 320
MfeI CAATTG 1 cut(s) 158
MhlI GDGCHC 2 cut(s) 45, 64
MluCI AATT 4 cut(s) 21, 158, 281, 300
MlyI GAGTC 1 cut(s) 196
MnlI CCTC 2 cut(s) 111, 304
MseI TTAA 2 cut(s) 18, 80
MspCI CTTAAG 1 cut(s) 79
MunI CAATTG 1 cut(s) 158
NcoI CCATGG 1 cut(s) 146
NdeII GATC 2 cut(s) 154, 277
NlaIII CATG 1 cut(s) 150
NlaIV GGNNCC 2 cut(s) 62, 144
PfeI GAWTC 2 cut(s) 70, 230
PleI GAGTC 1 cut(s) 196
PpsI GAGTC 1 cut(s) 196
PspN4I GGNNCC 2 cut(s) 62, 144
PspOMI GGGCCC 1 cut(s) 60
PspPI GGNCC 2 cut(s) 60, 61
RsaI GTAC 1 cut(s) 6
RsaNI GTAC 1 cut(s) 5
SaqAI TTAA 2 cut(s) 18, 80
Sau3AI GATC 2 cut(s) 154, 277
Sau96I GGNCC 2 cut(s) 60, 61
SchI GAGTC 1 cut(s) 196
SduI GDGCHC 2 cut(s) 45, 64
SetI ASST 5 cut(s) 110, 122, 168, 315, 322
SmlI CTYRAG 1 cut(s) 79
SmoI CTYRAG 1 cut(s) 79
Sse9I AATT 4 cut(s) 21, 158, 281, 300
SsiI CCGC 2 cut(s) 210, 227
SspMI CTAG 3 cut(s) 90, 105, 243
StyI CCWWGG 1 cut(s) 146
TaaI ACNGT 1 cut(s) 36
TaqI TCGA 1 cut(s) 221
TasI AATT 4 cut(s) 21, 158, 281, 300
TfiI GAWTC 2 cut(s) 70, 230
Tru1I TTAA 2 cut(s) 18, 80
Tru9I TTAA 2 cut(s) 18, 80
TspGWI ACGGA 2 cut(s) 175, 223
Vha464I CTTAAG 1 cut(s) 79
XspI CTAG 3 cut(s) 90, 105, 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.