pycom11g05190

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
4004262 .. 4005194
933 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g05190.1

Sequence Viewer

Length: 933 bp
ATGTTGTACAATGTAAAATTTTATAATCAATGTAAAGTGAAAATTACAGAGCATGGAGATAAGATAATAGAATACATTCCTGGAGTCAGCACCACATGCATTGCAGATCTACCCGCAAAGTTTTTTGTAGACGATCCAAAAGCCCTCCAGAAGCCCCTTGAAGCAGTTTCTCAGGTAGTAGAAGCACAGTATCTTTTGTTCAGTTCAGTCTATGAGCTTGATCCGCAAGCCTTTGAAGCCTTGAAAGCCAAGTTTGCTTTCCCTATCTACCCTATTGGCCCAAGCATACCTCACTTTGAACTTTCAAAAACACTTACCACTAATCAAAACGATATCGATTATCTGCATTGGCTAGATTCTCAACCCAAAAAGTCTGTTTTGTACATCTCCATGGGAAGTTTCCTCTCAGTTTCGAAATCCCAAATGGATGAAATTGTTGCTGGGGTGAAAAGTAGTGGTGTTAGGGCTTTTTGGGTGGCTCGTGGAGATACTTGTGAGTTGAGAGATTGTGTTGGTGATTTGTGTTTGGTGGTGCCTTGGTGTGACCAATTGAGGGTTTTGTGTCACGATTCGATTGGCGGGTTTTGGTCACATTGTGGCTGGAATTCAACTTTGGAAGCTATTTATGCTGGTCTTCCAATTCTTACTTTCCCTATTATTTGGGATCAAATTCCTAACGGTAAGCAGATTGTGGAAGATTGGAGGATTGGATACCGGGTGAAGAAGAAGGCAGGGGTCGAACTTGTTGTGAGTAGCGAGGAAATTGCAGATCTTGTGAAGAAGTTCATGGATGTGGAAAGTGAGGAGGGGAAGGATTTGAGGGAAAGAGTTAAACAACTTCAAGAGGTTTGTCGAGGTGCAATTGCTAATGGTGGCTCATCCGATACCAACCTTGATGCTTTTCTTAAGGATATTTCACAAGGACATAATTAA

Protein Analysis

311

Amino Acids

34.74

Weight (kDa)

5.25

Isoelectric Point (pI)

31.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 111 - 236 2.5e-15 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 24
AccB1I GGYRCC 1 cut(s) 532
AccI GTMKAC 1 cut(s) 129
AciI CCGC 3 cut(s) 114, 224, 579
AclWI GGATC 3 cut(s) 128, 215, 672
AcsI RAATTY 3 cut(s) 17, 604, 669
AdeI CACNNNGTG 1 cut(s) 596
AfaI GTAC 2 cut(s) 8, 383
AfiI CCNNNNNNNGG 1 cut(s) 553
AflII CTTAAG 1 cut(s) 905
AgsI TTSAA 7 cut(s) 161, 236, 244, 299, 306, 609, 842
AjnI CCWGG 1 cut(s) 79
AjuI GAANNNNNNNTTGG 4 cut(s) 242, 274, 596, 628
AluBI AGCT 2 cut(s) 217, 620
AluI AGCT 2 cut(s) 217, 620
AlwI GGATC 3 cut(s) 128, 215, 672
AoxI GGCC 1 cut(s) 277
ApoI RAATTY 3 cut(s) 17, 604, 669
Asp700I GAANNNNTTC 2 cut(s) 75, 782
AspS9I GGNCC 1 cut(s) 278
AsuC2I CCSGG 1 cut(s) 716
AsuHPI GGTGA 3 cut(s) 457, 527, 730
AsuII TTCGAA 1 cut(s) 413
BanI GGYRCC 1 cut(s) 532
BauI CACGAG 1 cut(s) 480
BbsI GAAGAC 1 cut(s) 626
BcgI CGANNNNNNTGC 2 cut(s) 746, 780
BciT130I CCWGG 1 cut(s) 81
BciVI GTATCC 1 cut(s) 704
BcnI CCSGG 1 cut(s) 716
BfaI CTAG 1 cut(s) 353
BfrI CTTAAG 1 cut(s) 905
BfuI GTATCC 1 cut(s) 704
BglII AGATCT 2 cut(s) 106, 769
Bme1390I CCNGG 2 cut(s) 81, 716
BmgT120I GGNCC 1 cut(s) 278
BmiI GGNNCC 1 cut(s) 534
BmrFI CCNGG 2 cut(s) 81, 716
BmsI GCATC 1 cut(s) 886
BpiI GAAGAC 1 cut(s) 626
BpmI CTGGAG 2 cut(s) 102, 131
Bpu14I TTCGAA 1 cut(s) 413
BpuMI CCSGG 1 cut(s) 716
Bsa29I ATCGAT 1 cut(s) 336
BsaJI CCNNGG 2 cut(s) 390, 536
Bsc4I CCNNNNNNNGG 1 cut(s) 553
Bse3DI GCAATG 1 cut(s) 99
BseBI CCWGG 1 cut(s) 81
BseCI ATCGAT 1 cut(s) 336
BseDI CCNNGG 2 cut(s) 390, 536
BseGI GGATG 3 cut(s) 433, 796, 878
BseLI CCNNNNNNNGG 1 cut(s) 553
BseMI GCAATG 1 cut(s) 99
BseMII CTCAG 2 cut(s) 185, 420
BseRI GAGGAG 1 cut(s) 818
BseYI CCCAGC 1 cut(s) 440
BshFI GGCC 1 cut(s) 279
BshNI GGYRCC 1 cut(s) 532
BshVI ATCGAT 1 cut(s) 336
BsiSI CCGG 1 cut(s) 715
BslI CCNNNNNNNGG 1 cut(s) 553
BsnI GGCC 1 cut(s) 279
Bsp119I TTCGAA 1 cut(s) 413
Bsp1407I TGTACA 2 cut(s) 6, 381
Bsp143I GATC 5 cut(s) 106, 133, 220, 664, 769
Bsp19I CCATGG 1 cut(s) 390
BspACI CCGC 3 cut(s) 114, 224, 579
BspANI GGCC 1 cut(s) 279
BspCNI CTCAG 2 cut(s) 184, 419
BspDI ATCGAT 1 cut(s) 336
BspLI GGNNCC 1 cut(s) 534
BspPI GGATC 3 cut(s) 128, 215, 672
BspT104I TTCGAA 1 cut(s) 413
BspT107I GGYRCC 1 cut(s) 532
BspTI CTTAAG 1 cut(s) 905
BsrDI GCAATG 1 cut(s) 99
BsrGI TGTACA 2 cut(s) 6, 381
BssECI CCNNGG 2 cut(s) 390, 536
BssMI GATC 5 cut(s) 106, 133, 220, 664, 769
BssSI CACGAG 1 cut(s) 480
BssT1I CCWWGG 2 cut(s) 390, 536
Bst2BI CACGAG 1 cut(s) 480
Bst2UI CCWGG 1 cut(s) 81
Bst4CI ACNGT 2 cut(s) 189, 680
BstAFI CTTAAG 1 cut(s) 905
BstAPI GCANNNNNTGC 1 cut(s) 96
BstAUI TGTACA 2 cut(s) 6, 381
BstBI TTCGAA 1 cut(s) 413
BstC8I GCNNGC 1 cut(s) 228
BstDEI CTNAG 2 cut(s) 171, 406
BstDSI CCRYGG 1 cut(s) 390
BstF5I GGATG 3 cut(s) 433, 796, 878
BstKTI GATC 5 cut(s) 109, 136, 223, 667, 772
BstMBI GATC 5 cut(s) 106, 133, 220, 664, 769
BstMWI GCNNNNNNNGC 6 cut(s) 96, 223, 236, 245, 254, 626
BstNI CCWGG 1 cut(s) 81
BstNSI RCATGY 1 cut(s) 99
BstSCI CCNGG 2 cut(s) 79, 714
BstV2I GAAGAC 1 cut(s) 626
BstX2I RGATCY 2 cut(s) 106, 769
BstYI RGATCY 2 cut(s) 106, 769
Bsu15I ATCGAT 1 cut(s) 336
BsuI GTATCC 1 cut(s) 704
BsuRI GGCC 1 cut(s) 279
BsuTUI ATCGAT 1 cut(s) 336
BtgI CCRYGG 1 cut(s) 390
BtsCI GGATG 3 cut(s) 433, 796, 878
Cac8I GCNNGC 1 cut(s) 228
Cfr13I GGNCC 1 cut(s) 278
ClaI ATCGAT 1 cut(s) 336
Csp6I GTAC 2 cut(s) 7, 382
CspCI CAANNNNNGTGG 2 cut(s) 82, 117
CviAII CATG 4 cut(s) 53, 96, 391, 787
CviQI GTAC 2 cut(s) 7, 382
DdeI CTNAG 2 cut(s) 171, 406
DpnI GATC 5 cut(s) 108, 135, 222, 666, 771
DpnII GATC 5 cut(s) 106, 133, 220, 664, 769
DraIII CACNNNGTG 1 cut(s) 596
Eco130I CCWWGG 2 cut(s) 390, 536
Eco32I GATATC 1 cut(s) 334
EcoRI GAATTC 1 cut(s) 604
EcoRII CCWGG 1 cut(s) 79
EcoRV GATATC 1 cut(s) 334
EcoT14I CCWWGG 2 cut(s) 390, 536
EcoT22I ATGCAT 1 cut(s) 101
ErhI CCWWGG 2 cut(s) 390, 536
FaeI CATG 4 cut(s) 56, 99, 394, 790
FaiI YATR 9 cut(s) 24, 54, 97, 213, 287, 392, 627, 788, 927
FatI CATG 4 cut(s) 52, 95, 390, 786
FauI CCCGC 2 cut(s) 121, 572
FblI GTMKAC 1 cut(s) 129
FokI GGATG 3 cut(s) 440, 803, 865
FspBI CTAG 1 cut(s) 353
GsaI CCCAGC 1 cut(s) 444
GsuI CTGGAG 2 cut(s) 102, 131
HaeIII GGCC 1 cut(s) 279
HapII CCGG 1 cut(s) 715
Hin1II CATG 4 cut(s) 56, 99, 394, 790
HinfI GANTC 3 cut(s) 84, 356, 569
HpaII CCGG 1 cut(s) 715
HphI GGTGA 3 cut(s) 457, 527, 730
Hpy166II GTNNAC 1 cut(s) 130
Hpy188I TCNGA 1 cut(s) 883
Hpy188III TCNNGA 3 cut(s) 148, 566, 842
Hpy8I GTNNAC 1 cut(s) 130
HpyAV CCTTC 2 cut(s) 721, 805
HpyCH4III ACNGT 2 cut(s) 189, 680
HpyCH4V TGCA 5 cut(s) 99, 104, 346, 767, 860
HpyF10VI GCNNNNNNNGC 6 cut(s) 96, 223, 236, 245, 254, 626
HpyF3I CTNAG 2 cut(s) 171, 406
Hsp92II CATG 4 cut(s) 56, 99, 394, 790
Kzo9I GATC 5 cut(s) 106, 133, 220, 664, 769
LpnPI CCDG 9 cut(s) 66, 93, 158, 161, 426, 586, 615, 717, 728
LweI GCATC 1 cut(s) 886
MaeI CTAG 1 cut(s) 353
MaeIII GTNAC 3 cut(s) 542, 563, 588
MalI GATC 5 cut(s) 108, 135, 222, 666, 771
MboI GATC 5 cut(s) 106, 133, 220, 664, 769
MboII GAAGA 5 cut(s) 626, 707, 733, 736, 790
MfeI CAATTG 2 cut(s) 548, 861
MflI RGATCY 2 cut(s) 106, 769
MlyI GAGTC 1 cut(s) 93
Mph1103I ATGCAT 1 cut(s) 101
MroXI GAANNNNTTC 2 cut(s) 75, 782
MseI TTAA 3 cut(s) 831, 906, 931
MslI CAYNNNNRTG 2 cut(s) 389, 791
MspCI CTTAAG 1 cut(s) 905
MspI CCGG 1 cut(s) 715
MspR9I CCNGG 2 cut(s) 81, 716
MunI CAATTG 2 cut(s) 548, 861
MvaI CCWGG 1 cut(s) 81
MwoI GCNNNNNNNGC 6 cut(s) 96, 223, 236, 245, 254, 626
NciI CCSGG 1 cut(s) 716
NcoI CCATGG 1 cut(s) 390
NdeII GATC 5 cut(s) 106, 133, 220, 664, 769
NlaIII CATG 4 cut(s) 56, 99, 394, 790
NlaIV GGNNCC 1 cut(s) 534
NmuCI GTSAC 3 cut(s) 542, 563, 588
NsiI ATGCAT 1 cut(s) 101
NspI RCATGY 1 cut(s) 99
NspV TTCGAA 1 cut(s) 413
PdmI GAANNNNTTC 2 cut(s) 75, 782
PfeI GAWTC 2 cut(s) 356, 569
PfoI TCCNGGA 1 cut(s) 79
PleI GAGTC 1 cut(s) 92
PpsI GAGTC 1 cut(s) 92
PsiI TTATAA 1 cut(s) 24
Psp6I CCWGG 1 cut(s) 79
PspFI CCCAGC 1 cut(s) 440
PspGI CCWGG 1 cut(s) 79
PspN4I GGNNCC 1 cut(s) 534
PspPI GGNCC 1 cut(s) 278
PsrI GAACNNNNNNTAC 2 cut(s) 182, 214
PsuI RGATCY 2 cut(s) 106, 769
RsaI GTAC 2 cut(s) 8, 383
RsaNI GTAC 2 cut(s) 7, 382
RseI CAYNNNNRTG 2 cut(s) 389, 791
SaqAI TTAA 3 cut(s) 831, 906, 931
Sau3AI GATC 5 cut(s) 106, 133, 220, 664, 769
Sau96I GGNCC 1 cut(s) 278
SchI GAGTC 1 cut(s) 93
ScrFI CCNGG 2 cut(s) 81, 716
SetI ASST 7 cut(s) 177, 219, 292, 622, 849, 859, 894
SfaNI GCATC 1 cut(s) 886
SfuI TTCGAA 1 cut(s) 413
SmiMI CAYNNNNRTG 2 cut(s) 389, 791
SmlI CTYRAG 1 cut(s) 905
SmoI CTYRAG 1 cut(s) 905
SsiI CCGC 3 cut(s) 114, 224, 579
SspMI CTAG 1 cut(s) 353
StyD4I CCNGG 2 cut(s) 79, 714
StyI CCWWGG 2 cut(s) 390, 536
TaaI ACNGT 2 cut(s) 189, 680
TaqI TCGA 5 cut(s) 336, 413, 572, 738, 853
TatI WGTACW 2 cut(s) 6, 381
TfiI GAWTC 2 cut(s) 356, 569
Tru1I TTAA 3 cut(s) 831, 906, 931
Tru9I TTAA 3 cut(s) 831, 906, 931
TseFI GTSAC 3 cut(s) 542, 563, 588
Tsp45I GTSAC 3 cut(s) 542, 563, 588
TspDTI ATGAA 2 cut(s) 444, 775
Vha464I CTTAAG 1 cut(s) 905
XapI RAATTY 3 cut(s) 17, 604, 669
XceI RCATGY 1 cut(s) 99
XmiI GTMKAC 1 cut(s) 129
XmnI GAANNNNTTC 2 cut(s) 75, 782
XspI CTAG 1 cut(s) 353
Zsp2I ATGCAT 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.