MD11G1062400.v1.1

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
5415423 .. 5415968
546 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1062400.v1.1.491

Sequence Viewer

Length: 510 bp
ATGGATGAAATTGTTGCTGGGGTGAAAAGTAGTGGTGTTAGGGTTTTTTGGGTGGCTCGTGGAGATACTTGTGAGTTGAGAGATTGTGTTGGTGATTTGGGTTTGGTGGTGCCTTGGTGTGACCAATTGAGGGTTTTGTGTCACGATTCGATTGGCGGGTTTTGGTCACATTGTGGCTGGAATTCAACTTTGGAAGCTGTTTATGCTGGTCTTCCAATTCTTACTTTCCCTATACTTTGGGATCAAATTCCTAACGGTAAGCAGATTGTGGAAGATTGGAGGATTGGATACCGGGTGAAGAAGAAGGTGGGGGTCGAACTTGTTGTGAGTAGCGAGGAAATTGCAGAACTTGTGAAGAAGTTTATGGATGTGGAAAGCGAGGAGGGGAAGGATTTGAGGGAAAGAGCTAAACAACTTCAAGAGATTTGTCGAGGTGCAATAGTCAATGGTGGCTCATCTGATAGAAACCTTGATGCTTTTCTTAAGGATATTTCACAAGGACATAATTAA

Protein Analysis

170

Amino Acids

18.86

Weight (kDa)

5.11

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 3 - 96 2.4e-12 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 109
AciI CCGC 1 cut(s) 156
AclWI GGATC 1 cut(s) 249
AcsI RAATTY 2 cut(s) 181, 246
AdeI CACNNNGTG 1 cut(s) 173
AfiI CCNNNNNNNGG 1 cut(s) 130
AflII CTTAAG 1 cut(s) 482
AgsI TTSAA 2 cut(s) 186, 419
AjuI GAANNNNNNNTTGG 2 cut(s) 173, 205
AluBI AGCT 2 cut(s) 197, 407
AluI AGCT 2 cut(s) 197, 407
AlwI GGATC 1 cut(s) 249
ApoI RAATTY 2 cut(s) 181, 246
AsuC2I CCSGG 1 cut(s) 293
AsuHPI GGTGA 3 cut(s) 34, 104, 307
BanI GGYRCC 1 cut(s) 109
BauI CACGAG 1 cut(s) 57
BbsI GAAGAC 1 cut(s) 203
BcgI CGANNNNNNTGC 2 cut(s) 323, 357
BciVI GTATCC 1 cut(s) 281
BcnI CCSGG 1 cut(s) 293
BfrI CTTAAG 1 cut(s) 482
BfuI GTATCC 1 cut(s) 281
Bme1390I CCNGG 1 cut(s) 293
BmiI GGNNCC 1 cut(s) 111
BmrFI CCNGG 1 cut(s) 293
BmsI GCATC 1 cut(s) 463
BpiI GAAGAC 1 cut(s) 203
BpuMI CCSGG 1 cut(s) 293
BsaJI CCNNGG 1 cut(s) 113
Bsc4I CCNNNNNNNGG 1 cut(s) 130
BseDI CCNNGG 1 cut(s) 113
BseGI GGATG 2 cut(s) 10, 373
BseLI CCNNNNNNNGG 1 cut(s) 130
BseRI GAGGAG 1 cut(s) 395
BseYI CCCAGC 1 cut(s) 17
BshNI GGYRCC 1 cut(s) 109
BsiSI CCGG 1 cut(s) 292
BslI CCNNNNNNNGG 1 cut(s) 130
Bsp143I GATC 1 cut(s) 241
BspACI CCGC 1 cut(s) 156
BspLI GGNNCC 1 cut(s) 111
BspPI GGATC 1 cut(s) 249
BspT107I GGYRCC 1 cut(s) 109
BspTI CTTAAG 1 cut(s) 482
BssECI CCNNGG 1 cut(s) 113
BssMI GATC 1 cut(s) 241
BssSI CACGAG 1 cut(s) 57
BssT1I CCWWGG 1 cut(s) 113
Bst2BI CACGAG 1 cut(s) 57
Bst4CI ACNGT 1 cut(s) 257
BstAFI CTTAAG 1 cut(s) 482
BstF5I GGATG 2 cut(s) 10, 373
BstKTI GATC 1 cut(s) 244
BstMBI GATC 1 cut(s) 241
BstMWI GCNNNNNNNGC 1 cut(s) 203
BstSCI CCNGG 1 cut(s) 291
BstV2I GAAGAC 1 cut(s) 203
BsuI GTATCC 1 cut(s) 281
BtsCI GGATG 2 cut(s) 10, 373
CviJI RGCY 5 cut(s) 56, 177, 197, 407, 453
CviKI_1 RGCY 5 cut(s) 56, 177, 197, 407, 453
DpnI GATC 1 cut(s) 243
DpnII GATC 1 cut(s) 241
DraIII CACNNNGTG 1 cut(s) 173
Eco130I CCWWGG 1 cut(s) 113
EcoRI GAATTC 1 cut(s) 181
EcoT14I CCWWGG 1 cut(s) 113
ErhI CCWWGG 1 cut(s) 113
FaiI YATR 4 cut(s) 204, 233, 365, 504
FauI CCCGC 1 cut(s) 149
FokI GGATG 2 cut(s) 17, 380
GsaI CCCAGC 1 cut(s) 21
HapII CCGG 1 cut(s) 292
HinfI GANTC 1 cut(s) 146
HpaII CCGG 1 cut(s) 292
HphI GGTGA 3 cut(s) 34, 104, 307
Hpy188I TCNGA 1 cut(s) 460
Hpy188III TCNNGA 2 cut(s) 143, 419
HpyAV CCTTC 2 cut(s) 298, 382
HpyCH4III ACNGT 1 cut(s) 257
HpyCH4V TGCA 2 cut(s) 344, 437
HpyF10VI GCNNNNNNNGC 1 cut(s) 203
Kzo9I GATC 1 cut(s) 241
LpnPI CCDG 4 cut(s) 3, 163, 192, 305
LweI GCATC 1 cut(s) 463
MaeIII GTNAC 3 cut(s) 119, 140, 165
MalI GATC 1 cut(s) 243
MboI GATC 1 cut(s) 241
MboII GAAGA 5 cut(s) 203, 284, 310, 313, 367
MfeI CAATTG 1 cut(s) 125
MluCI AATT 7 cut(s) 9, 125, 181, 216, 246, 339, 505
MnlI CCTC 7 cut(s) 123, 273, 328, 373, 376, 390, 425
MseI TTAA 2 cut(s) 483, 508
MspCI CTTAAG 1 cut(s) 482
MspI CCGG 1 cut(s) 292
MspR9I CCNGG 1 cut(s) 293
MunI CAATTG 1 cut(s) 125
MwoI GCNNNNNNNGC 1 cut(s) 203
NciI CCSGG 1 cut(s) 293
NdeII GATC 1 cut(s) 241
NlaIV GGNNCC 1 cut(s) 111
NmuCI GTSAC 3 cut(s) 119, 140, 165
PfeI GAWTC 1 cut(s) 146
PspFI CCCAGC 1 cut(s) 17
PspN4I GGNNCC 1 cut(s) 111
SaqAI TTAA 2 cut(s) 483, 508
Sau3AI GATC 1 cut(s) 241
ScrFI CCNGG 1 cut(s) 293
SetI ASST 5 cut(s) 199, 309, 409, 436, 471
SfaNI GCATC 1 cut(s) 463
SmlI CTYRAG 1 cut(s) 482
SmoI CTYRAG 1 cut(s) 482
Sse9I AATT 7 cut(s) 9, 125, 181, 216, 246, 339, 505
SsiI CCGC 1 cut(s) 156
StyD4I CCNGG 1 cut(s) 291
StyI CCWWGG 1 cut(s) 113
TaaI ACNGT 1 cut(s) 257
TaqI TCGA 3 cut(s) 149, 315, 430
TasI AATT 7 cut(s) 9, 125, 181, 216, 246, 339, 505
TfiI GAWTC 1 cut(s) 146
Tru1I TTAA 2 cut(s) 483, 508
Tru9I TTAA 2 cut(s) 483, 508
TseFI GTSAC 3 cut(s) 119, 140, 165
Tsp45I GTSAC 3 cut(s) 119, 140, 165
TspDTI ATGAA 1 cut(s) 21
Vha464I CTTAAG 1 cut(s) 482
XapI RAATTY 2 cut(s) 181, 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.