Rh5CG511100

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
71382011 .. 71382814
804 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG511100.1

Sequence Viewer

Length: 804 bp
ATGAAGCTTGCTCTGGAATGCATTGAAATGGTTCCAAAAGCACATTACCTTCTATTCACTTCAGTGTATGAGCTTGAACCCAAAATCTTTAACTCTTTGCAAGCTGAATTTGCTTTCCCTGTGTACCCAATTGGTCCTGCCATACCTTATTTAGAGCTAGAATATGATTCAAGTAGTGACAATGGCCTTGACTATCTAAAATGGCTAGATTCCCAACCAAAACGCTCTGTCTTGTACATTTCACTGGGGAGTTTTCTTTCGGTTTCGAGTGCCCAAATGGATGAAATTGCTGCCGGGTTGCGAGATAGTGGGATTCGGTTCATTTGGGTTGCGAGGGGAGAGAGTTCTAGGTTGAAAGAGAGCTGTGGTGATATGGGGTTGGTGGTGCCATGGTGTGAGCAATTGAAGGTTTTGTCTCATTCTTCTGTTGGGGGGTTTTGGACTCATTGTGGGTGGAACTCAACTCTTGAAGCTGTTTTTGGTGATGTTCCAATGCTTACTTTCCCTCTGTTCTTGGATCAAGTGCCCAACAGTAGGCAAATTGTTGAAGACTGGAGGATTGGAAAGAGGGTTAGAGAGGTACAAGGCGATGAGAGTTTGATGACAAGGGACAAAGTTGCCGAGCTGGTGCAGAGATTTATGGATCTTGAAAGCGGCGATGGAAAGGAACTGAGGAAGAAAGCGAAAGAACTCGGGGATTTGTGTCACCAAGCAATTGCAGAAGGTGGTTCATCTGATAAGAACCTTGATGGTTTGATCAGGGATATAACCAAAGTTGCAGCCATCAAGACTCAAGAGGACTGA

Protein Analysis

267

Amino Acids

29.92

Weight (kDa)

4.96

Isoelectric Point (pI)

41.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 57 - 188 4.2e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 385
AciI CCGC 1 cut(s) 654
AclWI GGATC 2 cut(s) 525, 651
AcsI RAATTY 1 cut(s) 107
AcuI CTGAAG 1 cut(s) 45
AfaI GTAC 3 cut(s) 125, 236, 582
AfiI CCNNNNNNNGG 1 cut(s) 534
AgsI TTSAA 8 cut(s) 26, 77, 171, 355, 406, 470, 548, 650
AjuI GAANNNNNNNTTGG 2 cut(s) 462, 494
AleI CACNNNNGTG 1 cut(s) 62
AluBI AGCT 7 cut(s) 7, 73, 104, 157, 363, 473, 625
AluI AGCT 7 cut(s) 7, 73, 104, 157, 363, 473, 625
Alw26I GTCTC 1 cut(s) 420
AlwI GGATC 2 cut(s) 525, 651
Ama87I CYCGRG 1 cut(s) 692
AoxI GGCC 1 cut(s) 184
ApeKI GCWGC 2 cut(s) 290, 779
ApoI RAATTY 1 cut(s) 107
Asp700I GAANNNNTTC 1 cut(s) 30
AspS9I GGNCC 1 cut(s) 134
AsuC2I CCSGG 1 cut(s) 295
AsuHPI GGTGA 3 cut(s) 380, 494, 698
AvaI CYCGRG 1 cut(s) 692
AvaII GGWCC 1 cut(s) 134
BaeGI GKGCMC 2 cut(s) 274, 528
BanI GGYRCC 1 cut(s) 385
BbsI GAAGAC 1 cut(s) 555
BbvI GCAGC 2 cut(s) 277, 791
BccI CCATC 3 cut(s) 653, 743, 791
BclI TGATCA 1 cut(s) 756
BcnI CCSGG 1 cut(s) 295
BcoDI GTCTC 1 cut(s) 420
BfaI CTAG 3 cut(s) 158, 206, 348
BisI GCNGC 3 cut(s) 291, 655, 780
BlsI GCNGC 3 cut(s) 292, 656, 781
Bme1390I CCNGG 1 cut(s) 295
Bme18I GGWCC 1 cut(s) 134
BmeT110I CYCGRG 1 cut(s) 692
BmgT120I GGNCC 1 cut(s) 134
BmiI GGNNCC 2 cut(s) 33, 387
BmrFI CCNGG 1 cut(s) 295
BmrI ACTGGG 1 cut(s) 254
BmuI ACTGGG 1 cut(s) 254
BpiI GAAGAC 1 cut(s) 555
BpmI CTGGAG 1 cut(s) 574
BpuEI CTTGAG 1 cut(s) 777
BpuMI CCSGG 1 cut(s) 295
BsaJI CCNNGG 1 cut(s) 389
Bsc4I CCNNNNNNNGG 1 cut(s) 534
Bse1I ACTGG 2 cut(s) 249, 557
BseDI CCNNGG 1 cut(s) 389
BseGI GGATG 1 cut(s) 286
BseLI CCNNNNNNNGG 1 cut(s) 534
BseMII CTCAG 1 cut(s) 662
BseNI ACTGG 2 cut(s) 249, 557
BseSI GKGCMC 2 cut(s) 274, 528
BseXI GCAGC 2 cut(s) 277, 791
BsgI GTGCAG 1 cut(s) 650
BshFI GGCC 1 cut(s) 186
BshNI GGYRCC 1 cut(s) 385
BsiHKCI CYCGRG 1 cut(s) 692
BsiSI CCGG 1 cut(s) 294
BslFI GGGAC 1 cut(s) 623
BslI CCNNNNNNNGG 1 cut(s) 534
BsmAI GTCTC 1 cut(s) 420
BsmFI GGGAC 1 cut(s) 623
BsmI GAATGC 1 cut(s) 23
BsnI GGCC 1 cut(s) 186
BsoBI CYCGRG 1 cut(s) 692
Bsp1286I GDGCHC 2 cut(s) 274, 528
Bsp1407I TGTACA 1 cut(s) 234
Bsp143I GATC 3 cut(s) 517, 643, 756
Bsp19I CCATGG 1 cut(s) 389
BspACI CCGC 1 cut(s) 654
BspANI GGCC 1 cut(s) 186
BspCNI CTCAG 1 cut(s) 663
BspLI GGNNCC 2 cut(s) 33, 387
BspPI GGATC 2 cut(s) 525, 651
BspT107I GGYRCC 1 cut(s) 385
BsrGI TGTACA 1 cut(s) 234
BsrI ACTGG 2 cut(s) 249, 557
BssECI CCNNGG 1 cut(s) 389
BssMI GATC 3 cut(s) 517, 643, 756
BssT1I CCWWGG 1 cut(s) 389
Bst4CI ACNGT 1 cut(s) 533
BstAUI TGTACA 1 cut(s) 234
BstC8I GCNNGC 2 cut(s) 9, 102
BstDEI CTNAG 1 cut(s) 671
BstDSI CCRYGG 1 cut(s) 389
BstF5I GGATG 1 cut(s) 286
BstKTI GATC 3 cut(s) 520, 646, 759
BstMAI GTCTC 1 cut(s) 420
BstMBI GATC 3 cut(s) 517, 643, 756
BstMWI GCNNNNNNNGC 1 cut(s) 110
BstSCI CCNGG 1 cut(s) 293
BstSLI GKGCMC 2 cut(s) 274, 528
BstV1I GCAGC 2 cut(s) 277, 791
BstV2I GAAGAC 1 cut(s) 555
BstX2I RGATCY 1 cut(s) 643
BstYI RGATCY 1 cut(s) 643
BsuRI GGCC 1 cut(s) 186
BtgI CCRYGG 1 cut(s) 389
BtgZI GCGATG 2 cut(s) 603, 672
BtsCI GGATG 1 cut(s) 286
BtsIMutI CAGTG 2 cut(s) 69, 242
Cac8I GCNNGC 2 cut(s) 9, 102
Cfr13I GGNCC 1 cut(s) 134
Csp6I GTAC 3 cut(s) 124, 235, 581
CviAII CATG 1 cut(s) 390
CviQI GTAC 3 cut(s) 124, 235, 581
DdeI CTNAG 1 cut(s) 671
DpnI GATC 3 cut(s) 519, 645, 758
DpnII GATC 3 cut(s) 517, 643, 756
Eco130I CCWWGG 1 cut(s) 389
Eco47I GGWCC 1 cut(s) 134
Eco57I CTGAAG 1 cut(s) 45
Eco88I CYCGRG 1 cut(s) 692
EcoT14I CCWWGG 1 cut(s) 389
EcoT22I ATGCAT 1 cut(s) 23
ErhI CCWWGG 1 cut(s) 389
FaeI CATG 1 cut(s) 393
FaiI YATR 7 cut(s) 69, 143, 165, 374, 391, 641, 767
FaqI GGGAC 1 cut(s) 623
FatI CATG 1 cut(s) 389
FbaI TGATCA 1 cut(s) 756
Fnu4HI GCNGC 3 cut(s) 291, 655, 780
FokI GGATG 1 cut(s) 293
Fsp4HI GCNGC 3 cut(s) 291, 655, 780
FspBI CTAG 3 cut(s) 158, 206, 348
GluI GCNGC 3 cut(s) 291, 655, 780
GsuI CTGGAG 1 cut(s) 574
HaeIII GGCC 1 cut(s) 186
HapII CCGG 1 cut(s) 294
Hin1II CATG 1 cut(s) 393
HindIII AAGCTT 1 cut(s) 5
HinfI GANTC 5 cut(s) 167, 209, 313, 442, 790
HpaII CCGG 1 cut(s) 294
HphI GGTGA 3 cut(s) 380, 494, 698
Hpy166II GTNNAC 1 cut(s) 124
Hpy188I TCNGA 1 cut(s) 736
Hpy188III TCNNGA 5 cut(s) 14, 467, 647, 787, 794
Hpy8I GTNNAC 1 cut(s) 124
HpyAV CCTTC 3 cut(s) 59, 400, 716
HpyCH4III ACNGT 1 cut(s) 533
HpyCH4V TGCA 5 cut(s) 21, 100, 631, 719, 779
HpyF10VI GCNNNNNNNGC 1 cut(s) 110
HpyF3I CTNAG 1 cut(s) 671
Hsp92II CATG 1 cut(s) 393
Ksp22I TGATCA 1 cut(s) 756
Kzo9I GATC 3 cut(s) 517, 643, 756
LpnPI CCDG 7 cut(s) 132, 150, 230, 307, 538, 611, 745
Lsp1109I GCAGC 2 cut(s) 277, 791
MaeI CTAG 3 cut(s) 158, 206, 348
MaeIII GTNAC 2 cut(s) 176, 704
MalI GATC 3 cut(s) 519, 645, 758
MboI GATC 3 cut(s) 517, 643, 756
MboII GAAGA 3 cut(s) 414, 560, 688
MfeI CAATTG 3 cut(s) 129, 401, 714
MflI RGATCY 1 cut(s) 643
MhlI GDGCHC 2 cut(s) 274, 528
MluCI AATT 6 cut(s) 107, 129, 285, 401, 540, 714
MlyI GAGTC 2 cut(s) 436, 784
MnlI CCTC 7 cut(s) 327, 516, 549, 561, 571, 666, 790
Mph1103I ATGCAT 1 cut(s) 23
MroXI GAANNNNTTC 1 cut(s) 30
MseI TTAA 1 cut(s) 90
MslI CAYNNNNRTG 2 cut(s) 26, 62
MspI CCGG 1 cut(s) 294
MspR9I CCNGG 1 cut(s) 295
MunI CAATTG 3 cut(s) 129, 401, 714
Mva1269I GAATGC 1 cut(s) 23
MwoI GCNNNNNNNGC 1 cut(s) 110
NciI CCSGG 1 cut(s) 295
NcoI CCATGG 1 cut(s) 389
NdeII GATC 3 cut(s) 517, 643, 756
NlaIII CATG 1 cut(s) 393
NlaIV GGNNCC 2 cut(s) 33, 387
NmeAIII GCCGAG 1 cut(s) 646
NmuCI GTSAC 2 cut(s) 176, 704
NsiI ATGCAT 1 cut(s) 23
OliI CACNNNNGTG 1 cut(s) 62
PctI GAATGC 1 cut(s) 23
PdmI GAANNNNTTC 1 cut(s) 30
PfeI GAWTC 3 cut(s) 167, 209, 313
PkrI GCNGC 3 cut(s) 292, 656, 781
PleI GAGTC 2 cut(s) 436, 784
PpsI GAGTC 2 cut(s) 436, 784
PspN4I GGNNCC 2 cut(s) 33, 387
PspPI GGNCC 1 cut(s) 134
PsuI RGATCY 1 cut(s) 643
RsaI GTAC 3 cut(s) 125, 236, 582
RsaNI GTAC 3 cut(s) 124, 235, 581
RseI CAYNNNNRTG 2 cut(s) 26, 62
SaqAI TTAA 1 cut(s) 90
SatI GCNGC 3 cut(s) 291, 655, 780
Sau3AI GATC 3 cut(s) 517, 643, 756
Sau96I GGNCC 1 cut(s) 134
SchI GAGTC 2 cut(s) 436, 784
ScrFI CCNGG 1 cut(s) 295
SduI GDGCHC 2 cut(s) 274, 528
SinI GGWCC 1 cut(s) 134
SmiMI CAYNNNNRTG 2 cut(s) 26, 62
SmlI CTYRAG 1 cut(s) 792
SmoI CTYRAG 1 cut(s) 792
Sse9I AATT 6 cut(s) 107, 129, 285, 401, 540, 714
SsiI CCGC 1 cut(s) 654
SspMI CTAG 3 cut(s) 158, 206, 348
StyD4I CCNGG 1 cut(s) 293
StyI CCWWGG 1 cut(s) 389
TaaI ACNGT 1 cut(s) 533
TaqI TCGA 1 cut(s) 266
TasI AATT 6 cut(s) 107, 129, 285, 401, 540, 714
TatI WGTACW 1 cut(s) 234
TauI GCSGC 1 cut(s) 657
TfiI GAWTC 3 cut(s) 167, 209, 313
Tru1I TTAA 1 cut(s) 90
Tru9I TTAA 1 cut(s) 90
TscAI CASTG 2 cut(s) 69, 249
TseFI GTSAC 2 cut(s) 176, 704
TseI GCWGC 2 cut(s) 290, 779
Tsp45I GTSAC 2 cut(s) 176, 704
TspDTI ATGAA 4 cut(s) 17, 297, 310, 720
TspRI CASTG 2 cut(s) 69, 249
VpaK11BI GGWCC 1 cut(s) 134
XapI RAATTY 1 cut(s) 107
XmnI GAANNNNTTC 1 cut(s) 30
XspI CTAG 3 cut(s) 158, 206, 348
Zsp2I ATGCAT 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.