Prupe.6G049600_v2.0.a1

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000228
Physical Location & Seq
Reverse (-)
3525821 .. 3527789
1969 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G049600.1

Sequence Viewer

Length: 1326 bp
ATGAAATCGGACATGGATTCCACCAGAGAATTAGAACCACCACCAACCAGTGTCTGCCACGTCGTGGCTCTGCCCTATCCTGGCAGAGGCCATATCAACCCCATGATGAACCTCTGCAAACTACTGTCTTCAAAGAAACCCGACATCCTCATCACCTTCGTCGTCACCGAAGAGTGGCACGGCTTCATGGGCTCCGACCAGAAACCCCATAACATCCGGTTTGCCACTGTACCAAACCTCATACCCTCCGAGCTTGTTCGTGCAAACGACATTCTTGGATTCGTGGAAGCTGTGAACACCAAATTGGAAGCTCCGGTTGAGCAGCTACTGGACCGGCTTGAGCAGCCGGTGAGCGCCATAGTTGCTGATCTCGGCGTTGTTTGGGCTACGAGGGTTGCAAGCCGAAGAAATATTCCGGTGGCTTCACTCTGGCCCATGTCGGCGTCGGTGATCTCAGAGTGGGAAAATTATGAGGTAATAGCAGATCTAGAACTTCCCACGGAGTTGAATGGAGACGGTTTGAAAATGTTGAAGATAAAACTGGAAATTGTGCGTAGCATATATAAAGCACAATATCTTGTGTCCTCTTCAGTCTACGAGCTTGAGCCCGAAGTGTTTGACAACCTAAAAGCCAAATTTGATTTGCCTATCTACCCTTTTGGTCCAAGCATACCTTACTTTGAGCTTTCAAAAAGTCCTCCCACAAATCACAATTACCTCTATAATTGGTTAGATTCTCAACCTAGACACTCAGTCTTATACATCTCTCTGGGAAGCTTCCTCTCAGTTTCAAAAGCCCAGATGGATGAAATCGTTGCCGGGGTGCAAAACAGTGGTGCTAGGTTCTTGTGGGTGGCTCGTGGGGATGCCTTTAAGTTGAAAGATGGTGTTGGTGATAAGGGTTTGGTAGTGTCTTGGTGTGACCAATTGAGGGTGTTGTGCCATGATTCTATTGGTGGGTTTTGGTCACATTGTGGTTGGAATTCAACCCTAGAAGCTGTTTATGCTGGTGTTCCAATTCTCACTTGCCCTATATTAGGGGATCAAATCCCCAACGCTAAGAAAATTGTGGAAGATTGGAAGATTGGATACAGGGTGCTGAAGAAGAAGGTGGGGGCTACTGAACATGAACATTTGGTGACCAGAGAGGAGATTGCAGAACTTGTGCAGAGGATTATGGATCTTGAAAGCAAGGAGGGGAAAGAGATGAGGAAAAGAGCGAAACAACTTCAGGAGACTTGTCACAGAGCAATTGCTAAAGGTGGCTCATCTGACAAGAACCTTGATGCTTTTATTGAGGATATTTCACGAGGCCATCACCACTAA

Protein Analysis

442

Amino Acids

49.46

Weight (kDa)

6.08

Isoelectric Point (pI)

40.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 64
AccI GTMKAC 1 cut(s) 594
AclWI GGATC 2 cut(s) 1050, 1188
AcsI RAATTY 2 cut(s) 635, 982
AcuI CTGAAG 3 cut(s) 573, 1121, 1214
AcyI GRCGYC 1 cut(s) 443
AdeI CACNNNGTG 2 cut(s) 64, 974
AfaI GTAC 1 cut(s) 231
AfiI CCNNNNNNNGG 6 cut(s) 64, 80, 86, 174, 931, 1037
AgsI TTSAA 9 cut(s) 132, 508, 523, 532, 690, 792, 880, 987, 1187
AhdI GACNNNNNGTC 1 cut(s) 752
AjiI CACGTC 1 cut(s) 61
AjnI CCWGG 1 cut(s) 79
AjuI GAANNNNNNNTTGG 2 cut(s) 287, 319
AluBI AGCT 8 cut(s) 253, 290, 311, 325, 601, 685, 777, 998
AluI AGCT 8 cut(s) 253, 290, 311, 325, 601, 685, 777, 998
Alw26I GTCTC 2 cut(s) 507, 1229
AlwI GGATC 2 cut(s) 1050, 1188
AlwNI CAGNNNCTG 2 cut(s) 54, 328
AoxI GGCC 3 cut(s) 88, 431, 1312
ApeKI GCWGC 2 cut(s) 322, 343
ApoI RAATTY 2 cut(s) 635, 982
AspLEI GCGC 1 cut(s) 356
AspS9I GGNCC 3 cut(s) 331, 432, 662
AsuC2I CCSGG 1 cut(s) 820
AsuHPI GGTGA 7 cut(s) 145, 157, 361, 460, 905, 1150, 1310
AvaII GGWCC 2 cut(s) 331, 662
BanII GRGCYC 2 cut(s) 194, 609
BarI GAAGNNNNNNTAC 2 cut(s) 1073, 1105
BauI CACGAG 2 cut(s) 858, 1308
BbsI GAAGAC 1 cut(s) 120
BbvI GCAGC 2 cut(s) 334, 355
BccI CCATC 3 cut(s) 796, 878, 1323
BceAI ACGGC 1 cut(s) 196
BciT130I CCWGG 1 cut(s) 81
BciVI GTATCC 1 cut(s) 1082
BcnI CCSGG 1 cut(s) 820
BcoDI GTCTC 2 cut(s) 507, 1229
BfaI CTAG 4 cut(s) 488, 744, 840, 992
BfoI RGCGCY 1 cut(s) 357
BfuI GTATCC 1 cut(s) 1082
BglII AGATCT 1 cut(s) 484
BisI GCNGC 2 cut(s) 323, 344
BlsI GCNGC 2 cut(s) 324, 345
Bme1390I CCNGG 2 cut(s) 81, 820
Bme18I GGWCC 2 cut(s) 331, 662
BmeRI GACNNNNNGTC 1 cut(s) 752
BmgBI CACGTC 1 cut(s) 61
BmgT120I GGNCC 3 cut(s) 331, 432, 662
BmiI GGNNCC 1 cut(s) 193
BmrFI CCNGG 2 cut(s) 81, 820
BmsI GCATC 2 cut(s) 856, 1276
BpiI GAAGAC 1 cut(s) 120
BpuEI CTTGAG 2 cut(s) 359, 623
BpuMI CCSGG 1 cut(s) 820
BsaHI GRCGYC 1 cut(s) 443
BsaJI CCNNGG 2 cut(s) 498, 819
BsaWI WCCGGW 3 cut(s) 216, 313, 415
Bsc4I CCNNNNNNNGG 6 cut(s) 64, 80, 86, 174, 931, 1037
Bse118I RCCGGY 2 cut(s) 333, 346
Bse1I ACTGG 3 cut(s) 48, 333, 546
BseBI CCWGG 1 cut(s) 81
BseDI CCNNGG 2 cut(s) 498, 819
BseGI GGATG 4 cut(s) 144, 213, 811, 871
BseLI CCNNNNNNNGG 6 cut(s) 64, 80, 86, 174, 931, 1037
BseMII CTCAG 3 cut(s) 468, 765, 798
BseNI ACTGG 3 cut(s) 48, 333, 546
BseRI GAGGAG 1 cut(s) 1163
BseXI GCAGC 2 cut(s) 334, 355
BsgI GTGCAG 1 cut(s) 1187
BshFI GGCC 3 cut(s) 90, 433, 1314
BsiSI CCGG 6 cut(s) 217, 314, 334, 347, 416, 819
BslI CCNNNNNNNGG 6 cut(s) 64, 80, 86, 174, 931, 1037
BsmAI GTCTC 2 cut(s) 507, 1229
BsmBI CGTCTC 1 cut(s) 507
BsnI GGCC 3 cut(s) 90, 433, 1314
Bsp1286I GDGCHC 2 cut(s) 194, 609
Bsp143I GATC 5 cut(s) 367, 450, 484, 1042, 1180
BspANI GGCC 3 cut(s) 90, 433, 1314
BspCNI CTCAG 3 cut(s) 467, 764, 797
BspLI GGNNCC 1 cut(s) 193
BspPI GGATC 2 cut(s) 1050, 1188
BsrFI RCCGGY 2 cut(s) 333, 346
BsrI ACTGG 3 cut(s) 48, 333, 546
BssAI RCCGGY 2 cut(s) 333, 346
BssECI CCNNGG 2 cut(s) 498, 819
BssMI GATC 5 cut(s) 367, 450, 484, 1042, 1180
BssNI GRCGYC 1 cut(s) 443
BssSI CACGAG 2 cut(s) 858, 1308
Bst2BI CACGAG 2 cut(s) 858, 1308
Bst2UI CCWGG 1 cut(s) 81
Bst4CI ACNGT 4 cut(s) 126, 229, 518, 833
Bst6I CTCTTC 2 cut(s) 165, 592
BstACI GRCGYC 1 cut(s) 443
BstC8I GCNNGC 1 cut(s) 400
BstDEI CTNAG 4 cut(s) 454, 751, 784, 1059
BstDSI CCRYGG 1 cut(s) 498
BstEII GGTNACC 1 cut(s) 1138
BstENI CCTNNNNNAGG 2 cut(s) 84, 1035
BstF5I GGATG 4 cut(s) 144, 213, 811, 871
BstH2I RGCGCY 1 cut(s) 357
BstHHI GCGC 1 cut(s) 356
BstKTI GATC 5 cut(s) 370, 453, 487, 1045, 1183
BstMAI GTCTC 2 cut(s) 507, 1229
BstMBI GATC 5 cut(s) 367, 450, 484, 1042, 1180
BstMWI GCNNNNNNNGC 4 cut(s) 189, 343, 362, 1004
BstNI CCWGG 1 cut(s) 81
BstPI GGTNACC 1 cut(s) 1138
BstSCI CCNGG 2 cut(s) 79, 818
BstV1I GCAGC 2 cut(s) 334, 355
BstV2I GAAGAC 1 cut(s) 120
BstX2I RGATCY 2 cut(s) 484, 1180
BstYI RGATCY 2 cut(s) 484, 1180
BsuI GTATCC 1 cut(s) 1082
BsuRI GGCC 3 cut(s) 90, 433, 1314
BtgI CCRYGG 1 cut(s) 498
BtrI CACGTC 1 cut(s) 61
BtsCI GGATG 4 cut(s) 144, 213, 811, 871
BtsIMutI CAGTG 3 cut(s) 55, 225, 838
Cac8I GCNNGC 1 cut(s) 400
CaiI CAGNNNCTG 2 cut(s) 54, 328
CfoI GCGC 1 cut(s) 356
Cfr10I RCCGGY 2 cut(s) 333, 346
Cfr13I GGNCC 3 cut(s) 331, 432, 662
CseI GACGC 1 cut(s) 432
Csp6I GTAC 1 cut(s) 230
CviAII CATG 6 cut(s) 13, 103, 187, 436, 944, 1127
CviQI GTAC 1 cut(s) 230
DdeI CTNAG 4 cut(s) 454, 751, 784, 1059
DpnI GATC 5 cut(s) 369, 452, 486, 1044, 1182
DpnII GATC 5 cut(s) 367, 450, 484, 1042, 1180
DraIII CACNNNGTG 2 cut(s) 64, 974
DriI GACNNNNNGTC 1 cut(s) 752
Eam1104I CTCTTC 2 cut(s) 165, 592
Eam1105I GACNNNNNGTC 1 cut(s) 752
EarI CTCTTC 2 cut(s) 165, 592
Eco24I GRGCYC 2 cut(s) 194, 609
Eco47I GGWCC 2 cut(s) 331, 662
Eco57I CTGAAG 3 cut(s) 573, 1121, 1214
Eco91I GGTNACC 1 cut(s) 1138
EcoNI CCTNNNNNAGG 2 cut(s) 84, 1035
EcoO65I GGTNACC 1 cut(s) 1138
EcoRI GAATTC 1 cut(s) 982
EcoRII CCWGG 1 cut(s) 79
EcoT38I GRGCYC 2 cut(s) 194, 609
Esp3I CGTCTC 1 cut(s) 507
FaeI CATG 6 cut(s) 16, 106, 190, 439, 947, 1130
FalI AAGNNNNNCTT 2 cut(s) 658, 690
FatI CATG 6 cut(s) 12, 102, 186, 435, 943, 1126
FblI GTMKAC 1 cut(s) 594
Fnu4HI GCNGC 2 cut(s) 323, 344
FokI GGATG 4 cut(s) 131, 200, 818, 878
FriOI GRGCYC 2 cut(s) 194, 609
Fsp4HI GCNGC 2 cut(s) 323, 344
FspBI CTAG 4 cut(s) 488, 744, 840, 992
GlaI GCGC 1 cut(s) 355
GluI GCNGC 2 cut(s) 323, 344
HaeII RGCGCY 1 cut(s) 357
HaeIII GGCC 3 cut(s) 90, 433, 1314
HapII CCGG 6 cut(s) 217, 314, 334, 347, 416, 819
HgaI GACGC 1 cut(s) 432
HhaI GCGC 1 cut(s) 356
Hin1I GRCGYC 1 cut(s) 443
Hin1II CATG 6 cut(s) 16, 106, 190, 439, 947, 1130
Hin6I GCGC 1 cut(s) 354
HinP1I GCGC 1 cut(s) 354
HindIII AAGCTT 1 cut(s) 775
HinfI GANTC 4 cut(s) 17, 279, 734, 947
HpaII CCGG 6 cut(s) 217, 314, 334, 347, 416, 819
HphI GGTGA 7 cut(s) 145, 157, 361, 460, 905, 1150, 1310
Hpy166II GTNNAC 2 cut(s) 295, 595
Hpy188I TCNGA 5 cut(s) 10, 196, 250, 457, 1273
Hpy188III TCNNGA 4 cut(s) 488, 1184, 1232, 1308
Hpy8I GTNNAC 2 cut(s) 295, 595
Hpy99I CGWCG 3 cut(s) 65, 164, 448
HpyAV CCTTC 2 cut(s) 166, 1102
HpyCH4III ACNGT 4 cut(s) 126, 229, 518, 833
HpyCH4IV ACGT 1 cut(s) 60
HpyCH4V TGCA 6 cut(s) 117, 263, 398, 826, 1157, 1168
HpyF10VI GCNNNNNNNGC 4 cut(s) 189, 343, 362, 1004
HpyF3I CTNAG 4 cut(s) 454, 751, 784, 1059
HpySE526I ACGT 1 cut(s) 60
Hsp92I GRCGYC 1 cut(s) 443
Hsp92II CATG 6 cut(s) 16, 106, 190, 439, 947, 1130
HspAI GCGC 1 cut(s) 354
Kzo9I GATC 5 cut(s) 367, 450, 484, 1042, 1180
LmnI GCTCC 2 cut(s) 197, 316
Lsp1109I GCAGC 2 cut(s) 334, 355
LweI GCATC 2 cut(s) 856, 1276
MaeI CTAG 4 cut(s) 488, 744, 840, 992
MaeII ACGT 1 cut(s) 60
MaeIII GTNAC 5 cut(s) 163, 920, 966, 1138, 1241
MalI GATC 5 cut(s) 369, 452, 486, 1044, 1182
MboI GATC 5 cut(s) 367, 450, 484, 1042, 1180
MboII GAAGA 9 cut(s) 120, 182, 417, 544, 579, 1085, 1093, 1114, 1117
MfeI CAATTG 2 cut(s) 926, 1251
MflI RGATCY 2 cut(s) 484, 1180
MhlI GDGCHC 2 cut(s) 194, 609
MmeI TCCRAC 2 cut(s) 219, 959
MseI TTAA 1 cut(s) 873
MspI CCGG 6 cut(s) 217, 314, 334, 347, 416, 819
MspR9I CCNGG 2 cut(s) 81, 820
MunI CAATTG 2 cut(s) 926, 1251
MvaI CCWGG 1 cut(s) 81
MwoI GCNNNNNNNGC 4 cut(s) 189, 343, 362, 1004
NciI CCSGG 1 cut(s) 820
NdeII GATC 5 cut(s) 367, 450, 484, 1042, 1180
NlaIII CATG 6 cut(s) 16, 106, 190, 439, 947, 1130
NlaIV GGNNCC 1 cut(s) 193
NmeAIII GCCGAG 1 cut(s) 351
NmuCI GTSAC 5 cut(s) 163, 920, 966, 1138, 1241
PcsI WCGNNNNNNNCGW 1 cut(s) 165
PfeI GAWTC 4 cut(s) 17, 279, 734, 947
PflMI CCANNNNNTGG 1 cut(s) 64
PkrI GCNGC 2 cut(s) 324, 345
Psp6I CCWGG 1 cut(s) 79
PspEI GGTNACC 1 cut(s) 1138
PspGI CCWGG 1 cut(s) 79
PspN4I GGNNCC 1 cut(s) 193
PspPI GGNCC 3 cut(s) 331, 432, 662
PstNI CAGNNNCTG 2 cut(s) 54, 328
PsuI RGATCY 2 cut(s) 484, 1180
RsaI GTAC 1 cut(s) 231
RsaNI GTAC 1 cut(s) 230
SaqAI TTAA 1 cut(s) 873
SatI GCNGC 2 cut(s) 323, 344
Sau3AI GATC 5 cut(s) 367, 450, 484, 1042, 1180
Sau96I GGNCC 3 cut(s) 331, 432, 662
ScrFI CCNGG 2 cut(s) 81, 820
SduI GDGCHC 2 cut(s) 194, 609
SfaNI GCATC 2 cut(s) 856, 1276
SinI GGWCC 2 cut(s) 331, 662
SmlI CTYRAG 2 cut(s) 338, 602
SmoI CTYRAG 2 cut(s) 338, 602
SspI AATATT 1 cut(s) 412
SspMI CTAG 4 cut(s) 488, 744, 840, 992
StyD4I CCNGG 2 cut(s) 79, 818
TaaI ACNGT 4 cut(s) 126, 229, 518, 833
TaiI ACGT 1 cut(s) 63
TfiI GAWTC 4 cut(s) 17, 279, 734, 947
Tru1I TTAA 1 cut(s) 873
Tru9I TTAA 1 cut(s) 873
TscAI CASTG 3 cut(s) 55, 232, 838
TseFI GTSAC 5 cut(s) 163, 920, 966, 1138, 1241
TseI GCWGC 2 cut(s) 322, 343
Tsp45I GTSAC 5 cut(s) 163, 920, 966, 1138, 1241
TspDTI ATGAA 5 cut(s) 17, 122, 175, 822, 1143
TspGWI ACGGA 1 cut(s) 515
TspRI CASTG 3 cut(s) 55, 232, 838
Van91I CCANNNNNTGG 1 cut(s) 64
VpaK11BI GGWCC 2 cut(s) 331, 662
XagI CCTNNNNNAGG 2 cut(s) 84, 1035
XapI RAATTY 2 cut(s) 635, 982
XbaI TCTAGA 1 cut(s) 487
XcmI CCANNNNNNNNNTGG 1 cut(s) 950
XmiI GTMKAC 1 cut(s) 594
XspI CTAG 4 cut(s) 488, 744, 840, 992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.