Rroxscaffold_1G00009780

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000228
Physical Location & Seq
Reverse (-)
12301506 .. 12304674
3169 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00009780.1

Sequence Viewer

Length: 1383 bp
ATGGGAACGGTAAAGCTCGGGCCAATCGCTCCTTGCCACCTGGTGGCGCTGCCGTACCCCGGCCGAGGCCACATCAACCCCATGATGAACCTCTGCAAGCTTCTCGCTTCTAAAAAACACGACCTCCTCATCACCTTCGTCGTCACCGAAGAGTGGCACGGCTTCATCGGATCCTACCCGAAACCTGACAACATCCGGTTCGCCACGGTGCCCAACGTTATACCCTCCGAACTCGGCCGGGCCAAGGACTTTCCGGGATTCTTGGAGGCCGTGAGCACCAAGCTGCAAGAGCCGTTCGAGCTGCTTCTGGACCGGCTCGAGCCGGAGATAAGCCTTATAGTTGCGGATCCATTTGTGGTTTGGGCAGTGAGGGTTGGGAATAAGAGGAATATTGCGGTGGCTTCGCTTTGGCCGATGTCGGCATCTGTGTTCTCGACGTTACGCCACTTCGAGCTGCTCAAAGAAAATGGCCACTTCCCTGCTGATGTGTCAGTCCGTGGAGATGAAGTAATAGATTACATCCCCGGAATCTCCACCACCCGCCTGGCAGATCTTCTTCCCACTGTATTCTACGACGACGTTCAACAAATCCTCAACAGAGCCCTTGAAGCTGTTTCCAGCACATACAAAGCACAATACCTCATATCAACTTCATTCTACGAGCTTGAGCCCCATGCCTTTGACACATTGAGAGCCAAACTGTCTTCGCCGGTCTACCCTATTGGCCCAAGCATCCCACACTTCGAGCTTTCAAAAAGTGCTCATGACAATAATGACCTAAACTATCTGCACTGGCTAGACTCTCAACCTAAAAGTTCTGTCATGTATGTCTCACTGGGGAGCTTCTTGTCTGTTTCGAATGCCCAGATGGATGAAATCATTGCCGGGGTGAAAAACAGCGGTGTTAGGTTCTTGTGGGTGTCGCGTGGGGATGCTTCTAAGCTCAAAGATGGCGTTGGTGACATGGGTTTGGTGGTGCCTTGGTGTGACCAATTGAGGGTGTTGTGTCACTCTTCCATTGGAGGGTTTTGGTCGCATTGTGGTTGGAACTCAACTCAAGAAGCTGTTTATGCTGGTCTTCCGGTTCTTACTTTCCCTATAGTTTTTGACCAAATCCCAAATGGGAAGCAAATTGTTGAGGATTGGAAGATCGGGTATAGGGTGAAGAAGAAGAAAGTTGGAGGTGGAGACATAGTGACCAGAGAGGAGATTGCAGAGCTTGTGCAGAGGTTTATGGATGTCGAAAGCAATGAGGGGAAGGAGGTTAGGAAAAGAGCAAAACAACTTCAAGAGACTTGTCAAGGAGCAATTGCAAAGGGTGGTTCTTCTGACTCCAACCTTGATGCTTTTATTAAGAATATTTCACAAGGTTATAGCCCTTAA

Protein Analysis

460

Amino Acids

50.99

Weight (kDa)

6.2

Isoelectric Point (pI)

40.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 255 - 383 1.6e-15 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 208, 976
AccB7I CCANNNNNTGG 1 cut(s) 43
AccI GTMKAC 1 cut(s) 714
AccII CGCG 1 cut(s) 925
AciI CCGC 4 cut(s) 344, 395, 541, 900
AclI AACGTT 1 cut(s) 216
AclWI GGATC 4 cut(s) 165, 178, 341, 354
AcoI YGGCCR 4 cut(s) 61, 235, 410, 469
AdeI CACNNNGTG 1 cut(s) 43
AfaI GTAC 1 cut(s) 56
AfiI CCNNNNNNNGG 7 cut(s) 43, 59, 65, 153, 244, 997, 1023
AgsI TTSAA 4 cut(s) 584, 608, 753, 1289
AjnI CCWGG 2 cut(s) 39, 543
Alw21I GWGCWC 2 cut(s) 278, 763
Alw26I GTCTC 3 cut(s) 835, 1182, 1286
AlwI GGATC 4 cut(s) 165, 178, 341, 354
Ama87I CYCGRG 2 cut(s) 17, 317
AoxI GGCC 9 cut(s) 20, 61, 67, 235, 240, 267, 410, 469, 724
ApeKI GCWGC 4 cut(s) 49, 283, 301, 454
AspLEI GCGC 1 cut(s) 49
AspS9I GGNCC 4 cut(s) 20, 240, 310, 725
AsuC2I CCSGG 5 cut(s) 60, 239, 255, 525, 886
AsuHPI GGTGA 5 cut(s) 124, 136, 901, 971, 1174
AsuII TTCGAA 1 cut(s) 857
AvaI CYCGRG 2 cut(s) 17, 317
AvaII GGWCC 1 cut(s) 310
BaeGI GKGCMC 1 cut(s) 213
BalI TGGCCA 1 cut(s) 471
BamHI GGATCC 2 cut(s) 170, 346
BanI GGYRCC 2 cut(s) 208, 976
BanII GRGCYC 2 cut(s) 604, 672
BbsI GAAGAC 2 cut(s) 696, 1070
Bbv12I GWGCWC 2 cut(s) 278, 763
BbvI GCAGC 4 cut(s) 36, 270, 288, 441
BccI CCATC 2 cut(s) 862, 944
BceAI ACGGC 4 cut(s) 37, 175, 254, 277
BcgI CGANNNNNNTGC 2 cut(s) 85, 119
BciT130I CCWGG 2 cut(s) 41, 545
BcnI CCSGG 5 cut(s) 60, 239, 255, 525, 886
BcoDI GTCTC 3 cut(s) 835, 1182, 1286
BfaI CTAG 1 cut(s) 797
BfmI CTRYAG 1 cut(s) 1098
BfoI RGCGCY 1 cut(s) 50
BglII AGATCT 1 cut(s) 550
BisI GCNGC 4 cut(s) 50, 284, 302, 455
BlsI GCNGC 4 cut(s) 51, 285, 303, 456
Bme1390I CCNGG 7 cut(s) 41, 60, 239, 255, 525, 545, 886
Bme18I GGWCC 1 cut(s) 310
BmeT110I CYCGRG 2 cut(s) 17, 317
BmgT120I GGNCC 4 cut(s) 20, 240, 310, 725
BmiI GGNNCC 4 cut(s) 172, 210, 348, 978
BmrFI CCNGG 7 cut(s) 41, 60, 239, 255, 525, 545, 886
BmrI ACTGGG 1 cut(s) 845
BmsI GCATC 4 cut(s) 431, 741, 922, 1333
BmuI ACTGGG 1 cut(s) 845
BpiI GAAGAC 2 cut(s) 696, 1070
Bpu14I TTCGAA 1 cut(s) 857
BpuEI CTTGAG 2 cut(s) 686, 1041
BpuMI CCSGG 5 cut(s) 60, 239, 255, 525, 886
BsaJI CCNNGG 8 cut(s) 58, 64, 204, 243, 496, 523, 885, 980
BsaWI WCCGGW 2 cut(s) 195, 1081
BsaXI ACNNNNNCTCC 6 cut(s) 108, 138, 492, 522, 1179, 1209
Bsc4I CCNNNNNNNGG 7 cut(s) 43, 59, 65, 153, 244, 997, 1023
Bse118I RCCGGY 2 cut(s) 312, 709
Bse1I ACTGG 2 cut(s) 797, 840
Bse3DI GCAATG 2 cut(s) 879, 1255
BseBI CCWGG 2 cut(s) 41, 545
BseDI CCNNGG 8 cut(s) 58, 64, 204, 243, 496, 523, 885, 980
BseGI GGATG 6 cut(s) 192, 519, 732, 877, 937, 1243
BseLI CCNNNNNNNGG 7 cut(s) 43, 59, 65, 153, 244, 997, 1023
BseMI GCAATG 2 cut(s) 879, 1255
BseNI ACTGG 2 cut(s) 797, 840
BseRI GAGGAG 2 cut(s) 116, 1220
BseSI GKGCMC 1 cut(s) 213
BseX3I CGGCCG 2 cut(s) 61, 235
BseXI GCAGC 4 cut(s) 36, 270, 288, 441
BsgI GTGCAG 2 cut(s) 773, 1244
Bsh1236I CGCG 1 cut(s) 925
Bsh1285I CGRYCG 2 cut(s) 64, 238
BshFI GGCC 9 cut(s) 22, 63, 69, 237, 242, 269, 412, 471, 726
BshNI GGYRCC 2 cut(s) 208, 976
BsiEI CGRYCG 2 cut(s) 64, 238
BsiHKAI GWGCWC 2 cut(s) 278, 763
BsiHKCI CYCGRG 2 cut(s) 17, 317
BslI CCNNNNNNNGG 7 cut(s) 43, 59, 65, 153, 244, 997, 1023
BsmAI GTCTC 3 cut(s) 835, 1182, 1286
BsmI GAATGC 1 cut(s) 865
BsnI GGCC 9 cut(s) 22, 63, 69, 237, 242, 269, 412, 471, 726
BsoBI CYCGRG 2 cut(s) 17, 317
Bsp119I TTCGAA 1 cut(s) 857
Bsp1286I GDGCHC 5 cut(s) 213, 278, 604, 672, 763
Bsp143I GATC 4 cut(s) 170, 346, 550, 1149
BspACI CCGC 4 cut(s) 344, 395, 541, 900
BspANI GGCC 9 cut(s) 22, 63, 69, 237, 242, 269, 412, 471, 726
BspFNI CGCG 1 cut(s) 925
BspHI TCATGA 1 cut(s) 763
BspLI GGNNCC 4 cut(s) 172, 210, 348, 978
BspPI GGATC 4 cut(s) 165, 178, 341, 354
BspT104I TTCGAA 1 cut(s) 857
BspT107I GGYRCC 2 cut(s) 208, 976
BsrDI GCAATG 2 cut(s) 879, 1255
BsrFI RCCGGY 2 cut(s) 312, 709
BsrI ACTGG 2 cut(s) 797, 840
BssAI RCCGGY 2 cut(s) 312, 709
BssECI CCNNGG 8 cut(s) 58, 64, 204, 243, 496, 523, 885, 980
BssMI GATC 4 cut(s) 170, 346, 550, 1149
BssT1I CCWWGG 2 cut(s) 243, 980
Bst2UI CCWGG 2 cut(s) 41, 545
Bst4CI ACNGT 4 cut(s) 10, 208, 565, 702
Bst6I CTCTTC 2 cut(s) 144, 1018
BstBI TTCGAA 1 cut(s) 857
BstC8I GCNNGC 1 cut(s) 98
BstDEI CTNAG 1 cut(s) 939
BstDSI CCRYGG 2 cut(s) 204, 496
BstF5I GGATG 6 cut(s) 192, 519, 732, 877, 937, 1243
BstFNI CGCG 1 cut(s) 925
BstH2I RGCGCY 1 cut(s) 50
BstHHI GCGC 1 cut(s) 49
BstKTI GATC 4 cut(s) 173, 349, 553, 1152
BstMAI GTCTC 3 cut(s) 835, 1182, 1286
BstMBI GATC 4 cut(s) 170, 346, 550, 1149
BstMCI CGRYCG 2 cut(s) 64, 238
BstMWI GCNNNNNNNGC 4 cut(s) 289, 298, 608, 1070
BstNI CCWGG 2 cut(s) 41, 545
BstSCI CCNGG 7 cut(s) 39, 58, 237, 253, 523, 543, 884
BstSFI CTRYAG 1 cut(s) 1098
BstSLI GKGCMC 1 cut(s) 213
BstUI CGCG 1 cut(s) 925
BstV1I GCAGC 4 cut(s) 36, 270, 288, 441
BstV2I GAAGAC 2 cut(s) 696, 1070
BstX2I RGATCY 3 cut(s) 170, 346, 550
BstXI CCANNNNNNTGG 1 cut(s) 544
BstYI RGATCY 3 cut(s) 170, 346, 550
BstZI CGGCCG 2 cut(s) 61, 235
BsuRI GGCC 9 cut(s) 22, 63, 69, 237, 242, 269, 412, 471, 726
BtgI CCRYGG 2 cut(s) 204, 496
BtsCI GGATG 6 cut(s) 192, 519, 732, 877, 937, 1243
BtsI GCAGTG 1 cut(s) 372
BtsIMutI CAGTG 4 cut(s) 372, 561, 790, 833
Cac8I GCNNGC 1 cut(s) 98
CciI TCATGA 1 cut(s) 763
CfoI GCGC 1 cut(s) 49
Cfr10I RCCGGY 2 cut(s) 312, 709
Cfr13I GGNCC 4 cut(s) 20, 240, 310, 725
CsiI ACCWGGT 1 cut(s) 39
Csp6I GTAC 1 cut(s) 55
CviAII CATG 5 cut(s) 82, 674, 764, 823, 964
CviQI GTAC 1 cut(s) 55
DdeI CTNAG 1 cut(s) 939
DpnI GATC 4 cut(s) 172, 348, 552, 1151
DpnII GATC 4 cut(s) 170, 346, 550, 1149
DraIII CACNNNGTG 1 cut(s) 43
EaeI YGGCCR 4 cut(s) 61, 235, 410, 469
EagI CGGCCG 2 cut(s) 61, 235
Eam1104I CTCTTC 2 cut(s) 144, 1018
EarI CTCTTC 2 cut(s) 144, 1018
EclXI CGGCCG 2 cut(s) 61, 235
Eco130I CCWWGG 2 cut(s) 243, 980
Eco24I GRGCYC 2 cut(s) 604, 672
Eco47I GGWCC 1 cut(s) 310
Eco52I CGGCCG 2 cut(s) 61, 235
Eco88I CYCGRG 2 cut(s) 17, 317
EcoRII CCWGG 2 cut(s) 39, 543
EcoT14I CCWWGG 2 cut(s) 243, 980
EcoT38I GRGCYC 2 cut(s) 604, 672
ErhI CCWWGG 2 cut(s) 243, 980
FaeI CATG 5 cut(s) 85, 677, 767, 826, 967
FatI CATG 5 cut(s) 81, 673, 763, 822, 963
FauI CCCGC 1 cut(s) 548
FblI GTMKAC 1 cut(s) 714
Fnu4HI GCNGC 4 cut(s) 50, 284, 302, 455
FokI GGATG 6 cut(s) 179, 506, 719, 884, 944, 1250
FriOI GRGCYC 2 cut(s) 604, 672
Fsp4HI GCNGC 4 cut(s) 50, 284, 302, 455
FspBI CTAG 1 cut(s) 797
GlaI GCGC 1 cut(s) 48
GluI GCNGC 4 cut(s) 50, 284, 302, 455
HaeII RGCGCY 1 cut(s) 50
HaeIII GGCC 9 cut(s) 22, 63, 69, 237, 242, 269, 412, 471, 726
HhaI GCGC 1 cut(s) 49
Hin1II CATG 5 cut(s) 85, 677, 767, 826, 967
Hin6I GCGC 1 cut(s) 47
HinP1I GCGC 1 cut(s) 47
HindIII AAGCTT 1 cut(s) 98
HinfI GANTC 4 cut(s) 258, 528, 800, 1331
HphI GGTGA 5 cut(s) 124, 136, 901, 971, 1174
Hpy166II GTNNAC 1 cut(s) 715
Hpy188I TCNGA 3 cut(s) 170, 229, 1330
Hpy188III TCNNGA 5 cut(s) 308, 433, 764, 1058, 1289
Hpy8I GTNNAC 1 cut(s) 715
Hpy99I CGWCG 4 cut(s) 143, 439, 578, 581
HpyAV CCTTC 2 cut(s) 145, 1252
HpyCH4III ACNGT 4 cut(s) 10, 208, 565, 702
HpyCH4IV ACGT 3 cut(s) 216, 437, 579
HpyCH4V TGCA 6 cut(s) 96, 286, 790, 1214, 1225, 1313
HpyF10VI GCNNNNNNNGC 4 cut(s) 289, 298, 608, 1070
HpyF3I CTNAG 1 cut(s) 939
HpySE526I ACGT 3 cut(s) 216, 437, 579
Hsp92II CATG 5 cut(s) 85, 677, 767, 826, 967
HspAI GCGC 1 cut(s) 47
Kzo9I GATC 4 cut(s) 170, 346, 550, 1149
LmnI GCTCC 3 cut(s) 34, 840, 1304
Lsp1109I GCAGC 4 cut(s) 36, 270, 288, 441
LweI GCATC 4 cut(s) 431, 741, 922, 1333
MabI ACCWGGT 1 cut(s) 39
MaeI CTAG 1 cut(s) 797
MaeII ACGT 3 cut(s) 216, 437, 579
MaeIII GTNAC 6 cut(s) 142, 438, 959, 986, 1007, 1195
MalI GATC 4 cut(s) 172, 348, 552, 1151
MboI GATC 4 cut(s) 170, 346, 550, 1149
MfeI CAATTG 2 cut(s) 992, 1308
MflI RGATCY 3 cut(s) 170, 346, 550
MhlI GDGCHC 5 cut(s) 213, 278, 604, 672, 763
MlsI TGGCCA 1 cut(s) 471
MluCI AATT 3 cut(s) 992, 1131, 1308
MluNI TGGCCA 1 cut(s) 471
MlyI GAGTC 2 cut(s) 794, 1325
MmeI TCCRAC 3 cut(s) 1025, 1159, 1359
Mox20I TGGCCA 1 cut(s) 471
MscI TGGCCA 1 cut(s) 471
MseI TTAA 2 cut(s) 1353, 1381
Msp20I TGGCCA 1 cut(s) 471
MspA1I CMGCKG 1 cut(s) 900
MspR9I CCNGG 7 cut(s) 41, 60, 239, 255, 525, 545, 886
MunI CAATTG 2 cut(s) 992, 1308
Mva1269I GAATGC 1 cut(s) 865
MvaI CCWGG 2 cut(s) 41, 545
MvnI CGCG 1 cut(s) 925
MwoI GCNNNNNNNGC 4 cut(s) 289, 298, 608, 1070
NciI CCSGG 5 cut(s) 60, 239, 255, 525, 886
NdeII GATC 4 cut(s) 170, 346, 550, 1149
NlaIII CATG 5 cut(s) 85, 677, 767, 826, 967
NlaIV GGNNCC 4 cut(s) 172, 210, 348, 978
NmeAIII GCCGAG 2 cut(s) 89, 213
NmuCI GTSAC 5 cut(s) 142, 959, 986, 1007, 1195
NspV TTCGAA 1 cut(s) 857
PaeR7I CTCGAG 1 cut(s) 317
PagI TCATGA 1 cut(s) 763
PcsI WCGNNNNNNNCGW 2 cut(s) 144, 410
PctI GAATGC 1 cut(s) 865
PfeI GAWTC 2 cut(s) 258, 528
PflMI CCANNNNNTGG 1 cut(s) 43
PfoI TCCNGGA 1 cut(s) 253
PkrI GCNGC 4 cut(s) 51, 285, 303, 456
PleI GAGTC 2 cut(s) 794, 1325
PpsI GAGTC 2 cut(s) 794, 1325
Psp1406I AACGTT 1 cut(s) 216
Psp6I CCWGG 2 cut(s) 39, 543
PspGI CCWGG 2 cut(s) 39, 543
PspN4I GGNNCC 4 cut(s) 172, 210, 348, 978
PspPI GGNCC 4 cut(s) 20, 240, 310, 725
PspXI VCTCGAGB 1 cut(s) 317
PsuI RGATCY 3 cut(s) 170, 346, 550
RsaI GTAC 1 cut(s) 56
RsaNI GTAC 1 cut(s) 55
SaqAI TTAA 2 cut(s) 1353, 1381
SatI GCNGC 4 cut(s) 50, 284, 302, 455
Sau3AI GATC 4 cut(s) 170, 346, 550, 1149
Sau96I GGNCC 4 cut(s) 20, 240, 310, 725
SchI GAGTC 2 cut(s) 794, 1325
ScrFI CCNGG 7 cut(s) 41, 60, 239, 255, 525, 545, 886
SduI GDGCHC 5 cut(s) 213, 278, 604, 672, 763
SexAI ACCWGGT 1 cut(s) 39
SfaNI GCATC 4 cut(s) 431, 741, 922, 1333
SfcI CTRYAG 1 cut(s) 1098
Sfr274I CTCGAG 1 cut(s) 317
SfuI TTCGAA 1 cut(s) 857
SinI GGWCC 1 cut(s) 310
SlaI CTCGAG 1 cut(s) 317
SmlI CTYRAG 3 cut(s) 317, 665, 1056
SmoI CTYRAG 3 cut(s) 317, 665, 1056
Sse9I AATT 3 cut(s) 992, 1131, 1308
SsiI CCGC 4 cut(s) 344, 395, 541, 900
SspI AATATT 2 cut(s) 391, 1360
SspMI CTAG 1 cut(s) 797
StyD4I CCNGG 7 cut(s) 39, 58, 237, 253, 523, 543, 884
StyI CCWWGG 2 cut(s) 243, 980
TaaI ACNGT 4 cut(s) 10, 208, 565, 702
TaiI ACGT 3 cut(s) 219, 440, 582
TaqI TCGA 7 cut(s) 297, 318, 434, 450, 744, 857, 1242
TasI AATT 3 cut(s) 992, 1131, 1308
TfiI GAWTC 2 cut(s) 258, 528
Tru1I TTAA 2 cut(s) 1353, 1381
Tru9I TTAA 2 cut(s) 1353, 1381
TscAI CASTG 4 cut(s) 372, 568, 797, 840
TseFI GTSAC 5 cut(s) 142, 959, 986, 1007, 1195
TseI GCWGC 4 cut(s) 49, 283, 301, 454
Tsp45I GTSAC 5 cut(s) 142, 959, 986, 1007, 1195
TspDTI ATGAA 5 cut(s) 101, 154, 519, 642, 888
TspGWI ACGGA 1 cut(s) 485
TspRI CASTG 4 cut(s) 372, 568, 797, 840
Van91I CCANNNNNTGG 1 cut(s) 43
VpaK11BI GGWCC 1 cut(s) 310
XcmI CCANNNNNNNNNTGG 3 cut(s) 357, 541, 1118
XhoI CTCGAG 1 cut(s) 317
XmiI GTMKAC 1 cut(s) 714
XspI CTAG 1 cut(s) 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.