MD11G1062000.v1.1

UDP-glycosyltransferase 87A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000228
Physical Location & Seq
Reverse (-)
5388994 .. 5392568
3575 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1062000.v1.1.491

Sequence Viewer

Length: 1368 bp
ATGAACTCCACCAAAGACCAGACAGGCCCTATCTGCCACGTGGTGGCCGTGCCGTATCCCGGTCGGGGCCACATCAACCCGATGATGAACCTCTGCAAGCTACTGACTTCACAAAAGACTGACATCCTCATCACCTTCGTCGTCACGGAGGAGTGGTCCGGTTTCATTGGATCCGAAGTCACCCCGGACAACATCCGACTCACCACGATTCCCAACGTTGTCCCGTCGGAGCTGGTCCGCGCCGCCGACATGTACAGCTTCATCGAAGCCATCATGACCAAGATGGAGGCCCCATTCGAGCGGCTCATGGATCGCCTCGAGCCTCCGCCGAGCCTGATCGTGGCCGACACTTTCCTGCCTTGGGCGGTCCGTGTTGGGAACCGGAGGAGTATCCCGGCGGCGTCGTTTTGGCCGATGCCGGCGTCCTTTTTCTCCTTTTTCCAACATTTTCATCTTTTAGCAGACAACGGGCATTTCCCGGTTGACTTGTTAGAGAGGGGAAATGAACGTGTGGACTACATCCCAGGTGTTTCTTCAACACGACTAGCAGACCTGCCCTTCATTAGTGAAATCTTCCCAAACATTCTCCACCACATCCTTGAAGATTTCTCATGGGTGCCTAGAGCACAATATCTCTTATTCCCCTCCATCTATGAGCTTGAACCCCAAGTCATCGACGTTTTAAGATCAATATTCTCACTACCCATTTACACAATTGGTCCATTAATACCCTACATCAAATCCAACGATCACCCGAGTTCTGGAATCAACTATCTACAATGGCTAGATTCTCAACCTTTCAGCTCTGTTCTGTACATCTCCATGGGAAGTTTTCTTTCATTTTCAGGTGCCCAAATGGATGAGATTGCAGGCGGTTTGCGCTTGAGTAGGGTTCGGTTCATATGGGTGGCCCGTGGGGAAACGGACAGGTTAAAAAATGCTTGTGGCGACATGGGTTTGGTAGTGCCTTGGTGTGAACAATTGAGGGTTTTGTGCCATTCTAGTGTTGGTGGGTTTTTGACACATTGCGGTTGGAACTCGGTTAGGGAAGGTGTTTTTGCTGGTGTCCCGTTTCTGACCTTTCCGTTACGTATGGATCAAGGCATGGTTAGTAAGATGATTGTGGAGGATTGGAAAGTTGGGTGGAGGTTGAGGAAGGCTGAGGACAAAATCGACCATTTGGTGACTAGCGAGGAGATTGCTGTGCTGGCGCAGAAGTTTATGGATTTGGAGGACGATGAAGGGAGAGAAATGAGAAGAAGGGCCAGAGAACTTAAACAGATATGTCATGATGCTATTGAAGAAGGCGGATCATCTCAAACGAACATCAATGCCTTCATTGTAGACATTTTTCAAGGCCATGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

456

Amino Acids

51.48

Weight (kDa)

5.42

Isoelectric Point (pI)

49.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 267 - 378 3e-15 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 561
AccB1I GGYRCC 2 cut(s) 616, 848
AccB7I CCANNNNNTGG 1 cut(s) 43
AccBSI CCGCTC 1 cut(s) 301
AccI GTMKAC 1 cut(s) 1344
AccII CGCG 1 cut(s) 240
AciI CCGC 9 cut(s) 238, 243, 301, 326, 365, 398, 873, 1029, 1308
AclI AACGTT 1 cut(s) 216
AclWI GGATC 5 cut(s) 165, 178, 318, 1104, 1318
AcoI YGGCCR 3 cut(s) 45, 342, 410
AcvI CACGTG 1 cut(s) 40
AcyI GRCGYC 2 cut(s) 401, 422
AdeI CACNNNGTG 1 cut(s) 43
AfaI GTAC 2 cut(s) 254, 815
AfiI CCNNNNNNNGG 6 cut(s) 43, 59, 65, 340, 361, 761
AflIII ACRYGT 2 cut(s) 249, 508
AgsI TTSAA 5 cut(s) 537, 602, 662, 1301, 1355
AjnI CCWGG 1 cut(s) 523
AluBI AGCT 5 cut(s) 100, 232, 258, 658, 804
AluI AGCT 5 cut(s) 100, 232, 258, 658, 804
Alw21I GWGCWC 1 cut(s) 628
AlwI GGATC 5 cut(s) 165, 178, 318, 1104, 1318
Ama87I CYCGRG 2 cut(s) 317, 754
AoxI GGCC 9 cut(s) 25, 45, 67, 288, 342, 410, 909, 1263, 1357
AseI ATTAAT 1 cut(s) 725
AspLEI GCGC 3 cut(s) 242, 882, 1213
AspS9I GGNCC 9 cut(s) 26, 67, 156, 235, 289, 367, 719, 910, 1263
AsuC2I CCSGG 4 cut(s) 60, 185, 395, 479
AsuHPI GGTGA 5 cut(s) 124, 172, 193, 743, 1195
AvaI CYCGRG 2 cut(s) 317, 754
AvaII GGWCC 4 cut(s) 156, 235, 367, 719
BaeGI GKGCMC 1 cut(s) 853
BamHI GGATCC 1 cut(s) 170
BanI GGYRCC 2 cut(s) 616, 848
BbrPI CACGTG 1 cut(s) 40
Bbv12I GWGCWC 1 cut(s) 628
BbvCI CCTCAGC 1 cut(s) 1161
BccI CCATC 3 cut(s) 277, 278, 656
BceAI ACGGC 2 cut(s) 32, 37
BcgI CGANNNNNNTGC 2 cut(s) 1181, 1215
BciT130I CCWGG 1 cut(s) 525
BciVI GTATCC 2 cut(s) 66, 401
BcnI CCSGG 4 cut(s) 60, 185, 395, 479
BfaI CTAG 5 cut(s) 545, 621, 785, 1002, 1188
BfuAI ACCTGC 1 cut(s) 561
BfuI GTATCC 2 cut(s) 66, 401
BisI GCNGC 3 cut(s) 243, 302, 399
BlsI GCNGC 3 cut(s) 244, 303, 400
Bme1390I CCNGG 5 cut(s) 60, 185, 395, 479, 525
Bme18I GGWCC 4 cut(s) 156, 235, 367, 719
BmeT110I CYCGRG 2 cut(s) 317, 754
BmgT120I GGNCC 9 cut(s) 26, 67, 156, 235, 289, 367, 719, 910, 1263
BmiI GGNNCC 6 cut(s) 68, 172, 291, 380, 618, 850
BmrFI CCNGG 5 cut(s) 60, 185, 395, 479, 525
BmsI GCATC 2 cut(s) 405, 1282
Bpu10I CCTNAGC 1 cut(s) 1161
BpuEI CTTGAG 1 cut(s) 904
BpuMI CCSGG 4 cut(s) 60, 185, 395, 479
BsaAI YACGTR 2 cut(s) 40, 1091
BsaHI GRCGYC 2 cut(s) 401, 422
BsaJI CCNNGG 6 cut(s) 183, 359, 523, 822, 913, 968
BsaWI WCCGGW 2 cut(s) 158, 381
BsaXI ACNNNNNCTCC 2 cut(s) 140, 170
Bsc4I CCNNNNNNNGG 6 cut(s) 43, 59, 65, 340, 361, 761
Bse118I RCCGGY 1 cut(s) 418
Bse3DI GCAATG 1 cut(s) 1024
BseBI CCWGG 1 cut(s) 525
BseDI CCNNGG 6 cut(s) 183, 359, 523, 822, 913, 968
BseGI GGATG 5 cut(s) 123, 192, 519, 594, 865
BseLI CCNNNNNNNGG 6 cut(s) 43, 59, 65, 340, 361, 761
BseMI GCAATG 1 cut(s) 1024
BseMII CTCAG 1 cut(s) 1152
BseRI GAGGAG 3 cut(s) 164, 400, 1208
BseSI GKGCMC 1 cut(s) 853
Bsh1236I CGCG 1 cut(s) 240
Bsh1285I CGRYCG 1 cut(s) 64
BshFI GGCC 9 cut(s) 27, 47, 69, 290, 344, 412, 911, 1265, 1359
BshNI GGYRCC 2 cut(s) 616, 848
BsiEI CGRYCG 1 cut(s) 64
BsiHKAI GWGCWC 1 cut(s) 628
BsiHKCI CYCGRG 2 cut(s) 317, 754
BsiSI CCGG 7 cut(s) 60, 159, 185, 382, 395, 419, 479
BslFI GGGAC 2 cut(s) 206, 1052
BslI CCNNNNNNNGG 6 cut(s) 43, 59, 65, 340, 361, 761
BsmFI GGGAC 2 cut(s) 206, 1052
BsnI GGCC 9 cut(s) 27, 47, 69, 290, 344, 412, 911, 1265, 1359
BsoBI CYCGRG 2 cut(s) 317, 754
Bsp1286I GDGCHC 2 cut(s) 628, 853
Bsp1407I TGTACA 2 cut(s) 252, 813
Bsp143I GATC 7 cut(s) 170, 310, 336, 686, 748, 1096, 1310
Bsp19I CCATGG 1 cut(s) 822
BspACI CCGC 9 cut(s) 238, 243, 301, 326, 365, 398, 873, 1029, 1308
BspANI GGCC 9 cut(s) 27, 47, 69, 290, 344, 412, 911, 1265, 1359
BspCNI CTCAG 1 cut(s) 1153
BspFNI CGCG 1 cut(s) 240
BspHI TCATGA 2 cut(s) 273, 1288
BspLI GGNNCC 6 cut(s) 68, 172, 291, 380, 618, 850
BspMI ACCTGC 1 cut(s) 561
BspPI GGATC 5 cut(s) 165, 178, 318, 1104, 1318
BspT107I GGYRCC 2 cut(s) 616, 848
BsrBI CCGCTC 1 cut(s) 301
BsrDI GCAATG 1 cut(s) 1024
BsrFI RCCGGY 1 cut(s) 418
BsrGI TGTACA 2 cut(s) 252, 813
BssAI RCCGGY 1 cut(s) 418
BssECI CCNNGG 6 cut(s) 183, 359, 523, 822, 913, 968
BssMI GATC 7 cut(s) 170, 310, 336, 686, 748, 1096, 1310
BssNI GRCGYC 2 cut(s) 401, 422
BssT1I CCWWGG 3 cut(s) 359, 822, 968
Bst2UI CCWGG 1 cut(s) 525
BstACI GRCGYC 2 cut(s) 401, 422
BstAUI TGTACA 2 cut(s) 252, 813
BstBAI YACGTR 2 cut(s) 40, 1091
BstC8I GCNNGC 4 cut(s) 98, 420, 871, 1209
BstDEI CTNAG 1 cut(s) 1161
BstDSI CCRYGG 2 cut(s) 822, 913
BstF5I GGATG 5 cut(s) 123, 192, 519, 594, 865
BstFNI CGCG 1 cut(s) 240
BstHHI GCGC 3 cut(s) 242, 882, 1213
BstKTI GATC 7 cut(s) 173, 313, 339, 689, 751, 1099, 1313
BstMBI GATC 7 cut(s) 170, 310, 336, 686, 748, 1096, 1310
BstMCI CGRYCG 1 cut(s) 64
BstMWI GCNNNNNNNGC 3 cut(s) 33, 879, 1208
BstNI CCWGG 1 cut(s) 525
BstNSI RCATGY 1 cut(s) 253
BstSCI CCNGG 5 cut(s) 58, 183, 393, 477, 523
BstSLI GKGCMC 1 cut(s) 853
BstSNI TACGTA 1 cut(s) 1091
BstUI CGCG 1 cut(s) 240
BstX2I RGATCY 1 cut(s) 170
BstYI RGATCY 1 cut(s) 170
BsuI GTATCC 2 cut(s) 66, 401
BsuRI GGCC 9 cut(s) 27, 47, 69, 290, 344, 412, 911, 1265, 1359
BtgI CCRYGG 2 cut(s) 822, 913
BtsCI GGATG 5 cut(s) 123, 192, 519, 594, 865
BveI ACCTGC 1 cut(s) 561
Cac8I GCNNGC 4 cut(s) 98, 420, 871, 1209
CciI TCATGA 2 cut(s) 273, 1288
CfoI GCGC 3 cut(s) 242, 882, 1213
Cfr10I RCCGGY 1 cut(s) 418
Cfr13I GGNCC 9 cut(s) 26, 67, 156, 235, 289, 367, 719, 910, 1263
CpoI CGGWCCG 1 cut(s) 367
CseI GACGC 2 cut(s) 390, 411
Csp6I GTAC 2 cut(s) 253, 814
CspI CGGWCCG 1 cut(s) 367
CviAII CATG 9 cut(s) 250, 274, 307, 612, 823, 952, 1105, 1289, 1361
CviQI GTAC 2 cut(s) 253, 814
DdeI CTNAG 1 cut(s) 1161
DpnI GATC 7 cut(s) 172, 312, 338, 688, 750, 1098, 1312
DpnII GATC 7 cut(s) 170, 310, 336, 686, 748, 1096, 1310
DraIII CACNNNGTG 1 cut(s) 43
EaeI YGGCCR 3 cut(s) 45, 342, 410
EciI GGCGGA 2 cut(s) 315, 1323
Eco105I TACGTA 1 cut(s) 1091
Eco130I CCWWGG 3 cut(s) 359, 822, 968
Eco47I GGWCC 4 cut(s) 156, 235, 367, 719
Eco72I CACGTG 1 cut(s) 40
Eco88I CYCGRG 2 cut(s) 317, 754
EcoO109I RGGNCCY 2 cut(s) 26, 289
EcoRII CCWGG 1 cut(s) 523
EcoT14I CCWWGG 3 cut(s) 359, 822, 968
EcoT22I ATGCAT 1 cut(s) 1366
ErhI CCWWGG 3 cut(s) 359, 822, 968
FaeI CATG 9 cut(s) 253, 277, 310, 615, 826, 955, 1108, 1292, 1364
FaqI GGGAC 2 cut(s) 206, 1052
FatI CATG 9 cut(s) 249, 273, 306, 611, 822, 951, 1104, 1288, 1360
FauNDI CATATG 1 cut(s) 902
FblI GTMKAC 1 cut(s) 1344
Fnu4HI GCNGC 3 cut(s) 243, 302, 399
FokI GGATG 5 cut(s) 110, 179, 506, 581, 872
Fsp4HI GCNGC 3 cut(s) 243, 302, 399
FspBI CTAG 5 cut(s) 545, 621, 785, 1002, 1188
GlaI GCGC 3 cut(s) 241, 881, 1212
GluI GCNGC 3 cut(s) 243, 302, 399
HaeIII GGCC 9 cut(s) 27, 47, 69, 290, 344, 412, 911, 1265, 1359
HapII CCGG 7 cut(s) 60, 159, 185, 382, 395, 419, 479
HgaI GACGC 2 cut(s) 390, 411
HhaI GCGC 3 cut(s) 242, 882, 1213
Hin1I GRCGYC 2 cut(s) 401, 422
Hin1II CATG 9 cut(s) 253, 277, 310, 615, 826, 955, 1108, 1292, 1364
Hin6I GCGC 3 cut(s) 240, 880, 1211
HinP1I GCGC 3 cut(s) 240, 880, 1211
HincII GTYRAC 1 cut(s) 484
HindII GTYRAC 1 cut(s) 484
HinfI GANTC 4 cut(s) 198, 208, 765, 788
HpaII CCGG 7 cut(s) 60, 159, 185, 382, 395, 419, 479
HphI GGTGA 5 cut(s) 124, 172, 193, 743, 1195
Hpy166II GTNNAC 4 cut(s) 484, 514, 977, 1345
Hpy188I TCNGA 4 cut(s) 175, 197, 229, 1077
Hpy188III TCNNGA 3 cut(s) 274, 762, 1289
Hpy8I GTNNAC 4 cut(s) 484, 514, 977, 1345
Hpy99I CGWCG 4 cut(s) 143, 229, 406, 680
HpyAV CCTTC 8 cut(s) 145, 568, 1043, 1150, 1235, 1254, 1298, 1345
HpyCH4IV ACGT 5 cut(s) 39, 216, 508, 678, 1090
HpyCH4V TGCA 3 cut(s) 96, 869, 1364
HpyF10VI GCNNNNNNNGC 3 cut(s) 33, 879, 1208
HpyF3I CTNAG 1 cut(s) 1161
HpySE526I ACGT 5 cut(s) 39, 216, 508, 678, 1090
Hsp92I GRCGYC 2 cut(s) 401, 422
Hsp92II CATG 9 cut(s) 253, 277, 310, 615, 826, 955, 1108, 1292, 1364
HspAI GCGC 3 cut(s) 240, 880, 1211
KroI GCCGGC 1 cut(s) 418
KroNI GCCGGC 1 cut(s) 420
Kzo9I GATC 7 cut(s) 170, 310, 336, 686, 748, 1096, 1310
LmnI GCTCC 1 cut(s) 229
LweI GCATC 2 cut(s) 405, 1282
MaeI CTAG 5 cut(s) 545, 621, 785, 1002, 1188
MaeII ACGT 5 cut(s) 39, 216, 508, 678, 1090
MaeIII GTNAC 4 cut(s) 142, 178, 1086, 1183
MalI GATC 7 cut(s) 172, 312, 338, 688, 750, 1098, 1312
MbiI CCGCTC 1 cut(s) 301
MboI GATC 7 cut(s) 170, 310, 336, 686, 748, 1096, 1310
MboII GAAGA 5 cut(s) 525, 565, 614, 1269, 1313
MfeI CAATTG 2 cut(s) 714, 980
MflI RGATCY 1 cut(s) 170
MhlI GDGCHC 2 cut(s) 628, 853
MluCI AATT 2 cut(s) 714, 980
MlyI GAGTC 1 cut(s) 192
MmeI TCCRAC 5 cut(s) 207, 220, 466, 768, 1013
Mph1103I ATGCAT 1 cut(s) 1366
MroNI GCCGGC 1 cut(s) 418
MseI TTAA 4 cut(s) 683, 725, 932, 1275
MslI CAYNNNNRTG 3 cut(s) 821, 905, 1002
MspI CCGG 7 cut(s) 60, 159, 185, 382, 395, 419, 479
MspR9I CCNGG 5 cut(s) 60, 185, 395, 479, 525
MunI CAATTG 2 cut(s) 714, 980
MvaI CCWGG 1 cut(s) 525
MvnI CGCG 1 cut(s) 240
MwoI GCNNNNNNNGC 3 cut(s) 33, 879, 1208
NaeI GCCGGC 1 cut(s) 420
NciI CCSGG 4 cut(s) 60, 185, 395, 479
NcoI CCATGG 1 cut(s) 822
NdeI CATATG 1 cut(s) 902
NdeII GATC 7 cut(s) 170, 310, 336, 686, 748, 1096, 1310
NgoMIV GCCGGC 1 cut(s) 418
NlaIII CATG 9 cut(s) 253, 277, 310, 615, 826, 955, 1108, 1292, 1364
NlaIV GGNNCC 6 cut(s) 68, 172, 291, 380, 618, 850
NmeAIII GCCGAG 1 cut(s) 354
NmuCI GTSAC 3 cut(s) 142, 178, 1183
NsiI ATGCAT 1 cut(s) 1366
NspI RCATGY 1 cut(s) 253
PaeR7I CTCGAG 1 cut(s) 317
PagI TCATGA 2 cut(s) 273, 1288
PciI ACATGT 1 cut(s) 249
PcsI WCGNNNNNNNCGW 2 cut(s) 45, 410
PdiI GCCGGC 1 cut(s) 420
PfeI GAWTC 3 cut(s) 208, 765, 788
PflMI CCANNNNNTGG 1 cut(s) 43
PkrI GCNGC 3 cut(s) 244, 303, 400
PleI GAGTC 1 cut(s) 192
PmaCI CACGTG 1 cut(s) 40
PmlI CACGTG 1 cut(s) 40
PpsI GAGTC 1 cut(s) 192
Ppu21I YACGTR 2 cut(s) 40, 1091
PscI ACATGT 1 cut(s) 249
PshBI ATTAAT 1 cut(s) 725
Psp1406I AACGTT 1 cut(s) 216
Psp6I CCWGG 1 cut(s) 523
PspCI CACGTG 1 cut(s) 40
PspGI CCWGG 1 cut(s) 523
PspN4I GGNNCC 6 cut(s) 68, 172, 291, 380, 618, 850
PspPI GGNCC 9 cut(s) 26, 67, 156, 235, 289, 367, 719, 910, 1263
PspXI VCTCGAGB 1 cut(s) 317
PsuI RGATCY 1 cut(s) 170
RsaI GTAC 2 cut(s) 254, 815
RsaNI GTAC 2 cut(s) 253, 814
RseI CAYNNNNRTG 3 cut(s) 821, 905, 1002
Rsr2I CGGWCCG 1 cut(s) 367
RsrII CGGWCCG 1 cut(s) 367
SaqAI TTAA 4 cut(s) 683, 725, 932, 1275
SatI GCNGC 3 cut(s) 243, 302, 399
Sau3AI GATC 7 cut(s) 170, 310, 336, 686, 748, 1096, 1310
Sau96I GGNCC 9 cut(s) 26, 67, 156, 235, 289, 367, 719, 910, 1263
SchI GAGTC 1 cut(s) 192
ScrFI CCNGG 5 cut(s) 60, 185, 395, 479, 525
SduI GDGCHC 2 cut(s) 628, 853
SfaNI GCATC 2 cut(s) 405, 1282
Sfr274I CTCGAG 1 cut(s) 317
SinI GGWCC 4 cut(s) 156, 235, 367, 719
SlaI CTCGAG 1 cut(s) 317
SmiMI CAYNNNNRTG 3 cut(s) 821, 905, 1002
SmlI CTYRAG 2 cut(s) 317, 883
SmoI CTYRAG 2 cut(s) 317, 883
SnaBI TACGTA 1 cut(s) 1091
Sse9I AATT 2 cut(s) 714, 980
SsiI CCGC 9 cut(s) 238, 243, 301, 326, 365, 398, 873, 1029, 1308
SspI AATATT 1 cut(s) 693
SspMI CTAG 5 cut(s) 545, 621, 785, 1002, 1188
StyD4I CCNGG 5 cut(s) 58, 183, 393, 477, 523
StyI CCWWGG 3 cut(s) 359, 822, 968
TaiI ACGT 5 cut(s) 42, 219, 511, 681, 1093
TaqI TCGA 5 cut(s) 264, 297, 318, 675, 1173
TasI AATT 2 cut(s) 714, 980
TatI WGTACW 2 cut(s) 252, 813
TauI GCSGC 3 cut(s) 245, 304, 401
TfiI GAWTC 3 cut(s) 208, 765, 788
Tru1I TTAA 4 cut(s) 683, 725, 932, 1275
Tru9I TTAA 4 cut(s) 683, 725, 932, 1275
TseFI GTSAC 3 cut(s) 142, 178, 1183
Tsp45I GTSAC 3 cut(s) 142, 178, 1183
TspGWI ACGGA 4 cut(s) 161, 359, 938, 1074
Van91I CCANNNNNTGG 1 cut(s) 43
VpaK11BI GGWCC 4 cut(s) 156, 235, 367, 719
VspI ATTAAT 1 cut(s) 725
XceI RCATGY 1 cut(s) 253
XcmI CCANNNNNNNNNTGG 1 cut(s) 1004
XhoI CTCGAG 1 cut(s) 317
XmiI GTMKAC 1 cut(s) 1344
XspI CTAG 5 cut(s) 545, 621, 785, 1002, 1188
Zsp2I ATGCAT 1 cut(s) 1366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.