Rh5BG487700

UDP-glycosyltransferase 87A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000228
Physical Location & Seq
Reverse (-)
77748488 .. 77752503
4016 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG487700.1

Sequence Viewer

Length: 1476 bp
ATGGATGGGCGGAAGTATAGGGCATTTTTTTTTCGGTCTGATGAGGTATACAAAATAAGGCCCCAACTGCACGTTCGTTCTCTATTAAATCTCTATCCGATTTCATCAAACAATTCCGATATGGATTCCGGCCGCAAAGAACCAACCACCGTCTGCCACGTAGTGGCCATGCCCTATCCCGGCCGGGGCCACGTCAACCCCATGATGAACCTCTGCAAGTTACTAGCTTCACAAAACAGCAACGTTCTCATCACCTTCGTCGTCACAGAAGAGTGGCTCGGCTTCATCGGTTCGGAACCAAAGCCGGACAACGTTGTCTTCGCCACAATCCCCAACGTTATCCCATCGGAGCTGGTCCGCGCAGCCCACATGGTTGCCTTCTTCGAAGCTCTCATGACCAAAATGGAATCTCCGTTTGATCTGCTCGTGGATCGGCTGGAGCCGCCGCCGAGTTTGATTCTGGGTGACACTTACCTGCCTTGGGCAGTTCGTGTCGGCAACCGGAGGAGGATCCCGGCGGCGTCGTTTTGGCCGATGTCGGCGTCCGTTTTCTCGGTGTTCCAACATTTTCATCTTCTAAAGGAAAATGGTCATTTCGCTGTTGACTTGTCGGAGAAGGGCAATGACCGTGTGGATTACATCCCTGGAGTTTCTTCTACACCAATCCAAGACTTTCCCCCTTTGATGCATGGAAAAAACCCAACTATACTCCGTGTCGTTCTTGAAGCATTTTCCTGGGTACCTAAAGCACAATACCTCTTATTCTCATCCATCTATGAGCTTGAAACCGAAGTCATTGACGTTTTAAGATCAGAATTCTCACTACCAATTTACACAGTTGGCCCATTAATACCTTACTTCAAAGCTAATGACCACCTGAGTAATGTTGACCATTCACAATGGCTAGATTCTCAACCTTGTAGCTCGGTCTTGTACATCTCCATGGGAAGCTTTTTGTCAGTTTCTAGTGCCCAAATGGATGAGATTGCAGCTGGTTTGCACAAAAGCGGTGTCCGGTTCTTCTGGGTAACTCGTGGTGATACCGGTAGGTTACGAGAGGTTTGTGGTGATAAGGGGTTAGTAGTGCCGTGGTGTGACCAATTGAGTTTGTTGAACCATTCTTGCATAGGGGGTTTCTTGACACATTGTGGGTGGAACTCAGTTAAAGAAGGTGTTTCCGCCGGTATTCCTTTTCTTACCTTTCCATTAAATATAGATCAAGGTATGAATGGGAAGGCGATTGTGGAGGATTGGAAGATTGGGTGGAGGGTGAAGAGTACTGAGGCTAAAATAGATCATTTGGTGACGAGCGAGGAAATTGCAGGGTTGGTGAAGAAATTTATGGATTTGGAGGACGGGGAAGGGAAAGACATGAGGAGAAGAGCCAGAGTGTTTCAGCAGATATGTCATGGTGCAATTGCAGAGGGTGGATCATCTGAAAGTAACATTAGCACCTTCATTAGTGACATTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

491

Amino Acids

54.92

Weight (kDa)

6.02

Isoelectric Point (pI)

39.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 303 - 419 1.1e-18 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 314
Acc36I ACCTGC 1 cut(s) 483
Acc65I GGTACC 1 cut(s) 739
AccB1I GGYRCC 1 cut(s) 739
AccB7I CCANNNNNTGG 1 cut(s) 163
AccI GTMKAC 1 cut(s) 48
AccII CGCG 1 cut(s) 360
AciI CCGC 8 cut(s) 10, 133, 358, 443, 446, 518, 1008, 1179
AclI AACGTT 3 cut(s) 243, 312, 336
AclWI GGATC 4 cut(s) 438, 505, 518, 1438
AcoI YGGCCR 4 cut(s) 130, 165, 181, 530
AcsI RAATTY 2 cut(s) 815, 1337
AcyI GRCGYC 2 cut(s) 521, 542
AdeI CACNNNGTG 2 cut(s) 163, 1148
AfaI GTAC 3 cut(s) 741, 935, 1279
AfiI CCNNNNNNNGG 4 cut(s) 163, 179, 185, 481
AgeI ACCGGT 1 cut(s) 1043
AgsI TTSAA 4 cut(s) 725, 785, 862, 1114
AjiI CACGTC 1 cut(s) 193
AjnI CCWGG 2 cut(s) 643, 734
AjuI GAANNNNNNNTTGG 2 cut(s) 57, 89
AluBI AGCT 8 cut(s) 227, 352, 389, 781, 866, 924, 951, 992
AluI AGCT 8 cut(s) 227, 352, 389, 781, 866, 924, 951, 992
AlwI GGATC 4 cut(s) 438, 505, 518, 1438
AoxI GGCC 7 cut(s) 59, 130, 165, 181, 187, 530, 841
ApeKI GCWGC 2 cut(s) 362, 989
ApoI RAATTY 2 cut(s) 815, 1337
ArsI GACNNNNNNTTYG 2 cut(s) 996, 1028
AseI ATTAAT 1 cut(s) 848
AsiGI ACCGGT 1 cut(s) 1043
Asp718I GGTACC 1 cut(s) 739
AspLEI GCGC 1 cut(s) 362
AspS9I GGNCC 4 cut(s) 60, 187, 355, 842
AsuC2I CCSGG 3 cut(s) 180, 185, 515
AsuHPI GGTGA 7 cut(s) 244, 476, 1049, 1079, 1282, 1315, 1342
AsuII TTCGAA 1 cut(s) 384
AvaII GGWCC 1 cut(s) 355
BaeGI GKGCMC 1 cut(s) 973
BalI TGGCCA 1 cut(s) 167
BamHI GGATCC 1 cut(s) 510
BanI GGYRCC 1 cut(s) 739
BauI CACGAG 2 cut(s) 425, 1032
BbsI GAAGAC 1 cut(s) 310
BbvI GCAGC 2 cut(s) 374, 1001
BccI CCATC 2 cut(s) 352, 779
BceAI ACGGC 1 cut(s) 1072
BcgI CGANNNNNNTGC 2 cut(s) 1301, 1335
BciT130I CCWGG 2 cut(s) 645, 736
BcnI CCSGG 3 cut(s) 180, 185, 515
BfaI CTAG 3 cut(s) 224, 905, 966
BfuAI ACCTGC 1 cut(s) 483
BisI GCNGC 6 cut(s) 133, 363, 443, 446, 519, 990
BlsI GCNGC 6 cut(s) 134, 364, 444, 447, 520, 991
BmcAI AGTACT 1 cut(s) 1279
Bme1390I CCNGG 5 cut(s) 180, 185, 515, 645, 736
Bme18I GGWCC 1 cut(s) 355
BmgBI CACGTC 1 cut(s) 193
BmgT120I GGNCC 4 cut(s) 60, 187, 355, 842
BmiI GGNNCC 6 cut(s) 62, 188, 297, 441, 512, 741
BmrFI CCNGG 5 cut(s) 180, 185, 515, 645, 736
BmsI GCATC 1 cut(s) 675
BpiI GAAGAC 1 cut(s) 310
BpmI CTGGAG 2 cut(s) 458, 666
Bpu14I TTCGAA 1 cut(s) 384
BpuMI CCSGG 3 cut(s) 180, 185, 515
BsaAI YACGTR 1 cut(s) 160
BsaHI GRCGYC 2 cut(s) 521, 542
BsaJI CCNNGG 6 cut(s) 184, 479, 643, 735, 942, 1088
BsaWI WCCGGW 3 cut(s) 501, 1014, 1043
Bsc4I CCNNNNNNNGG 4 cut(s) 163, 179, 185, 481
Bse118I RCCGGY 2 cut(s) 1043, 1181
Bse3DI GCAATG 1 cut(s) 628
BseBI CCWGG 2 cut(s) 645, 736
BseDI CCNNGG 6 cut(s) 184, 479, 643, 735, 942, 1088
BseGI GGATG 4 cut(s) 10, 639, 767, 985
BseLI CCNNNNNNNGG 4 cut(s) 163, 179, 185, 481
BseMI GCAATG 1 cut(s) 628
BseMII CTCAG 3 cut(s) 869, 1173, 1272
BseRI GAGGAG 2 cut(s) 520, 1390
BseSI GKGCMC 1 cut(s) 973
BseX3I CGGCCG 2 cut(s) 130, 181
BseXI GCAGC 2 cut(s) 374, 1001
BsgI GTGCAG 1 cut(s) 53
Bsh1236I CGCG 1 cut(s) 360
Bsh1285I CGRYCG 2 cut(s) 133, 184
BshFI GGCC 7 cut(s) 61, 132, 167, 183, 189, 532, 843
BshNI GGYRCC 1 cut(s) 739
BshTI ACCGGT 1 cut(s) 1043
BsiEI CGRYCG 2 cut(s) 133, 184
BsiSI CCGG 9 cut(s) 129, 180, 184, 305, 502, 515, 1015, 1044, 1182
BslI CCNNNNNNNGG 4 cut(s) 163, 179, 185, 481
BsnI GGCC 7 cut(s) 61, 132, 167, 183, 189, 532, 843
Bsp119I TTCGAA 1 cut(s) 384
Bsp1286I GDGCHC 1 cut(s) 973
Bsp1407I TGTACA 1 cut(s) 933
Bsp143I GATC 7 cut(s) 418, 430, 510, 809, 1216, 1294, 1430
Bsp19I CCATGG 1 cut(s) 942
BspACI CCGC 8 cut(s) 10, 133, 358, 443, 446, 518, 1008, 1179
BspANI GGCC 7 cut(s) 61, 132, 167, 183, 189, 532, 843
BspCNI CTCAG 3 cut(s) 870, 1172, 1273
BspFNI CGCG 1 cut(s) 360
BspHI TCATGA 1 cut(s) 393
BspLI GGNNCC 6 cut(s) 62, 188, 297, 441, 512, 741
BspMI ACCTGC 1 cut(s) 483
BspPI GGATC 4 cut(s) 438, 505, 518, 1438
BspQI GCTCTTC 1 cut(s) 1375
BspT104I TTCGAA 1 cut(s) 384
BspT107I GGYRCC 1 cut(s) 739
BsrDI GCAATG 1 cut(s) 628
BsrFI RCCGGY 2 cut(s) 1043, 1181
BsrGI TGTACA 1 cut(s) 933
BssAI RCCGGY 2 cut(s) 1043, 1181
BssECI CCNNGG 6 cut(s) 184, 479, 643, 735, 942, 1088
BssMI GATC 7 cut(s) 418, 430, 510, 809, 1216, 1294, 1430
BssNAI GTATAC 1 cut(s) 49
BssNI GRCGYC 2 cut(s) 521, 542
BssSI CACGAG 2 cut(s) 425, 1032
BssT1I CCWWGG 2 cut(s) 479, 942
Bst1107I GTATAC 1 cut(s) 49
Bst2BI CACGAG 2 cut(s) 425, 1032
Bst2UI CCWGG 2 cut(s) 645, 736
Bst4CI ACNGT 3 cut(s) 151, 629, 838
Bst6I CTCTTC 3 cut(s) 264, 1268, 1375
BstACI GRCGYC 2 cut(s) 521, 542
BstAUI TGTACA 1 cut(s) 933
BstBAI YACGTR 1 cut(s) 160
BstBI TTCGAA 1 cut(s) 384
BstDEI CTNAG 3 cut(s) 878, 1159, 1281
BstDSI CCRYGG 2 cut(s) 942, 1088
BstF5I GGATG 4 cut(s) 10, 639, 767, 985
BstFNI CGCG 1 cut(s) 360
BstHHI GCGC 1 cut(s) 362
BstKTI GATC 7 cut(s) 421, 433, 513, 812, 1219, 1297, 1433
BstMBI GATC 7 cut(s) 418, 430, 510, 809, 1216, 1294, 1430
BstMCI CGRYCG 2 cut(s) 133, 184
BstMWI GCNNNNNNNGC 2 cut(s) 67, 442
BstNI CCWGG 2 cut(s) 645, 736
BstSCI CCNGG 5 cut(s) 178, 183, 513, 643, 734
BstSLI GKGCMC 1 cut(s) 973
BstUI CGCG 1 cut(s) 360
BstV1I GCAGC 2 cut(s) 374, 1001
BstV2I GAAGAC 1 cut(s) 310
BstX2I RGATCY 1 cut(s) 510
BstYI RGATCY 1 cut(s) 510
BstZ17I GTATAC 1 cut(s) 49
BstZI CGGCCG 2 cut(s) 130, 181
BsuRI GGCC 7 cut(s) 61, 132, 167, 183, 189, 532, 843
BtgI CCRYGG 2 cut(s) 942, 1088
BtrI CACGTC 1 cut(s) 193
BtsCI GGATG 4 cut(s) 10, 639, 767, 985
BveI ACCTGC 1 cut(s) 483
CciI TCATGA 1 cut(s) 393
CfoI GCGC 1 cut(s) 362
Cfr10I RCCGGY 2 cut(s) 1043, 1181
Cfr13I GGNCC 4 cut(s) 60, 187, 355, 842
CseI GACGC 2 cut(s) 510, 531
Csp6I GTAC 3 cut(s) 740, 934, 1278
CspAI ACCGGT 1 cut(s) 1043
CviAII CATG 8 cut(s) 169, 202, 370, 394, 689, 943, 1372, 1409
CviQI GTAC 3 cut(s) 740, 934, 1278
DdeI CTNAG 3 cut(s) 878, 1159, 1281
DpnI GATC 7 cut(s) 420, 432, 512, 811, 1218, 1296, 1432
DpnII GATC 7 cut(s) 418, 430, 510, 809, 1216, 1294, 1430
DraIII CACNNNGTG 2 cut(s) 163, 1148
DrdI GACNNNNNNGTC 1 cut(s) 314
DseDI GACNNNNNNGTC 1 cut(s) 314
EaeI YGGCCR 4 cut(s) 130, 165, 181, 530
EagI CGGCCG 2 cut(s) 130, 181
Eam1104I CTCTTC 3 cut(s) 264, 1268, 1375
EarI CTCTTC 3 cut(s) 264, 1268, 1375
EciI GGCGGA 2 cut(s) 25, 1168
EclXI CGGCCG 2 cut(s) 130, 181
Eco130I CCWWGG 2 cut(s) 479, 942
Eco47I GGWCC 1 cut(s) 355
Eco52I CGGCCG 2 cut(s) 130, 181
EcoO109I RGGNCCY 1 cut(s) 60
EcoRI GAATTC 1 cut(s) 815
EcoRII CCWGG 2 cut(s) 643, 734
EcoT14I CCWWGG 2 cut(s) 479, 942
EcoT22I ATGCAT 1 cut(s) 690
ErhI CCWWGG 2 cut(s) 479, 942
FaeI CATG 8 cut(s) 172, 205, 373, 397, 692, 946, 1375, 1412
FatI CATG 8 cut(s) 168, 201, 369, 393, 688, 942, 1371, 1408
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 6 cut(s) 133, 363, 443, 446, 519, 990
FokI GGATG 4 cut(s) 17, 626, 754, 992
Fsp4HI GCNGC 6 cut(s) 133, 363, 443, 446, 519, 990
FspBI CTAG 3 cut(s) 224, 905, 966
GlaI GCGC 1 cut(s) 361
GluI GCNGC 6 cut(s) 133, 363, 443, 446, 519, 990
GsuI CTGGAG 2 cut(s) 458, 666
HaeIII GGCC 7 cut(s) 61, 132, 167, 183, 189, 532, 843
HapII CCGG 9 cut(s) 129, 180, 184, 305, 502, 515, 1015, 1044, 1182
HgaI GACGC 2 cut(s) 510, 531
HhaI GCGC 1 cut(s) 362
Hin1I GRCGYC 2 cut(s) 521, 542
Hin1II CATG 8 cut(s) 172, 205, 373, 397, 692, 946, 1375, 1412
Hin6I GCGC 1 cut(s) 360
HinP1I GCGC 1 cut(s) 360
HincII GTYRAC 3 cut(s) 196, 604, 889
HindII GTYRAC 3 cut(s) 196, 604, 889
HindIII AAGCTT 1 cut(s) 949
HinfI GANTC 4 cut(s) 125, 407, 457, 908
HpaII CCGG 9 cut(s) 129, 180, 184, 305, 502, 515, 1015, 1044, 1182
HphI GGTGA 7 cut(s) 244, 476, 1049, 1079, 1282, 1315, 1342
Hpy166II GTNNAC 4 cut(s) 49, 196, 604, 889
Hpy188I TCNGA 8 cut(s) 40, 99, 118, 295, 349, 613, 814, 1438
Hpy188III TCNNGA 3 cut(s) 394, 722, 1138
Hpy8I GTNNAC 4 cut(s) 49, 196, 604, 889
Hpy99I CGWCG 2 cut(s) 263, 526
HpyAV CCTTC 7 cut(s) 265, 388, 610, 1163, 1228, 1355, 1465
HpyCH4III ACNGT 3 cut(s) 151, 629, 838
HpyCH4IV ACGT 7 cut(s) 72, 159, 192, 243, 312, 336, 801
HpyCH4V TGCA 9 cut(s) 70, 216, 688, 989, 1000, 1125, 1322, 1415, 1421
HpyF10VI GCNNNNNNNGC 2 cut(s) 67, 442
HpyF3I CTNAG 3 cut(s) 878, 1159, 1281
HpySE526I ACGT 7 cut(s) 72, 159, 192, 243, 312, 336, 801
Hsp92I GRCGYC 2 cut(s) 521, 542
Hsp92II CATG 8 cut(s) 172, 205, 373, 397, 692, 946, 1375, 1412
HspAI GCGC 1 cut(s) 360
KpnI GGTACC 1 cut(s) 743
Kzo9I GATC 7 cut(s) 418, 430, 510, 809, 1216, 1294, 1430
LguI GCTCTTC 1 cut(s) 1375
LmnI GCTCC 2 cut(s) 349, 439
Lsp1109I GCAGC 2 cut(s) 374, 1001
LweI GCATC 1 cut(s) 675
MaeI CTAG 3 cut(s) 224, 905, 966
MaeII ACGT 7 cut(s) 72, 159, 192, 243, 312, 336, 801
MaeIII GTNAC 9 cut(s) 219, 262, 464, 1027, 1050, 1094, 1303, 1442, 1463
MalI GATC 7 cut(s) 420, 432, 512, 811, 1218, 1296, 1432
MboI GATC 7 cut(s) 418, 430, 510, 809, 1216, 1294, 1430
MfeI CAATTG 2 cut(s) 1100, 1416
MflI RGATCY 1 cut(s) 510
MhlI GDGCHC 1 cut(s) 973
MlsI TGGCCA 1 cut(s) 167
MluCI AATT 7 cut(s) 112, 815, 828, 1100, 1317, 1337, 1416
MluNI TGGCCA 1 cut(s) 167
MmeI TCCRAC 2 cut(s) 586, 591
Mox20I TGGCCA 1 cut(s) 167
Mph1103I ATGCAT 1 cut(s) 690
MscI TGGCCA 1 cut(s) 167
MseI TTAA 6 cut(s) 86, 806, 848, 1164, 1208, 1474
MslI CAYNNNNRTG 1 cut(s) 941
Msp20I TGGCCA 1 cut(s) 167
MspA1I CMGCKG 1 cut(s) 992
MspI CCGG 9 cut(s) 129, 180, 184, 305, 502, 515, 1015, 1044, 1182
MspR9I CCNGG 5 cut(s) 180, 185, 515, 645, 736
MunI CAATTG 2 cut(s) 1100, 1416
MvaI CCWGG 2 cut(s) 645, 736
MvnI CGCG 1 cut(s) 360
MwoI GCNNNNNNNGC 2 cut(s) 67, 442
NciI CCSGG 3 cut(s) 180, 185, 515
NcoI CCATGG 1 cut(s) 942
NdeII GATC 7 cut(s) 418, 430, 510, 809, 1216, 1294, 1430
NlaIII CATG 8 cut(s) 172, 205, 373, 397, 692, 946, 1375, 1412
NlaIV GGNNCC 6 cut(s) 62, 188, 297, 441, 512, 741
NmeAIII GCCGAG 2 cut(s) 258, 474
NmuCI GTSAC 5 cut(s) 262, 464, 1094, 1303, 1463
NsiI ATGCAT 1 cut(s) 690
NspV TTCGAA 1 cut(s) 384
PagI TCATGA 1 cut(s) 393
PciSI GCTCTTC 1 cut(s) 1375
PcsI WCGNNNNNNNCGW 1 cut(s) 530
PfeI GAWTC 4 cut(s) 125, 407, 457, 908
PflMI CCANNNNNTGG 1 cut(s) 163
PinAI ACCGGT 1 cut(s) 1043
PkrI GCNGC 6 cut(s) 134, 364, 444, 447, 520, 991
Ppu21I YACGTR 1 cut(s) 160
PshBI ATTAAT 1 cut(s) 848
Psp1406I AACGTT 3 cut(s) 243, 312, 336
Psp6I CCWGG 2 cut(s) 643, 734
PspGI CCWGG 2 cut(s) 643, 734
PspN4I GGNNCC 6 cut(s) 62, 188, 297, 441, 512, 741
PspPI GGNCC 4 cut(s) 60, 187, 355, 842
PsuI RGATCY 1 cut(s) 510
PvuII CAGCTG 1 cut(s) 992
RsaI GTAC 3 cut(s) 741, 935, 1279
RsaNI GTAC 3 cut(s) 740, 934, 1278
RseI CAYNNNNRTG 1 cut(s) 941
SapI GCTCTTC 1 cut(s) 1375
SaqAI TTAA 6 cut(s) 86, 806, 848, 1164, 1208, 1474
SatI GCNGC 6 cut(s) 133, 363, 443, 446, 519, 990
Sau3AI GATC 7 cut(s) 418, 430, 510, 809, 1216, 1294, 1430
Sau96I GGNCC 4 cut(s) 60, 187, 355, 842
ScaI AGTACT 1 cut(s) 1279
ScrFI CCNGG 5 cut(s) 180, 185, 515, 645, 736
SduI GDGCHC 1 cut(s) 973
SfaNI GCATC 1 cut(s) 675
SfuI TTCGAA 1 cut(s) 384
SinI GGWCC 1 cut(s) 355
SmiMI CAYNNNNRTG 1 cut(s) 941
Sse9I AATT 7 cut(s) 112, 815, 828, 1100, 1317, 1337, 1416
SsiI CCGC 8 cut(s) 10, 133, 358, 443, 446, 518, 1008, 1179
SspMI CTAG 3 cut(s) 224, 905, 966
StyD4I CCNGG 5 cut(s) 178, 183, 513, 643, 734
StyI CCWWGG 2 cut(s) 479, 942
TaaI ACNGT 3 cut(s) 151, 629, 838
TaiI ACGT 7 cut(s) 75, 162, 195, 246, 315, 339, 804
TaqI TCGA 1 cut(s) 384
TaqII GACCGA 2 cut(s) 24, 916
TasI AATT 7 cut(s) 112, 815, 828, 1100, 1317, 1337, 1416
TatI WGTACW 2 cut(s) 933, 1277
TauI GCSGC 4 cut(s) 135, 445, 448, 521
TfiI GAWTC 4 cut(s) 125, 407, 457, 908
Tru1I TTAA 6 cut(s) 86, 806, 848, 1164, 1208, 1474
Tru9I TTAA 6 cut(s) 86, 806, 848, 1164, 1208, 1474
TseFI GTSAC 5 cut(s) 262, 464, 1094, 1303, 1463
TseI GCWGC 2 cut(s) 362, 989
Tsp45I GTSAC 5 cut(s) 262, 464, 1094, 1303, 1463
TspDTI ATGAA 6 cut(s) 93, 221, 274, 560, 1241, 1447
TspGWI ACGGA 3 cut(s) 402, 535, 701
Van91I CCANNNNNTGG 1 cut(s) 163
VpaK11BI GGWCC 1 cut(s) 355
VspI ATTAAT 1 cut(s) 848
XapI RAATTY 2 cut(s) 815, 1337
XmiI GTMKAC 1 cut(s) 48
XspI CTAG 3 cut(s) 224, 905, 966
ZrmI AGTACT 1 cut(s) 1279
Zsp2I ATGCAT 1 cut(s) 690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.