MD11G1062300.v1.1

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000228
Physical Location & Seq
Reverse (-)
5409873 .. 5413005
3133 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1062300.v1.1.491

Sequence Viewer

Length: 1878 bp
ATGGACGCCACCTCCAAAGTCTGCCATGTGGTGGCGATGCCGTATCCCGGCAGAGGCCACGTCAACCCCATGATCAACCTCTGCAAATTACTAGCCGCAAAGAAAAACGACATTCTAATCACCGTCGTCGTCACCGAAGAGTGGCTTGGATTCATAGGACCCGAACCGAAACCCGATAACATCCGCTTTAGCACCATCCCCAACGTCCTTCCGTCCGAGCTAGTCCGCGGCGCTAACTATCCCGCTTTCTACGACGCCGTAATGACAAAGATGGGAGCTCCGTTTGAACGATTACTCGATCGAATTCAGCCTCCAGTGGCCACCATTATAGCCGACATCGAGCTTCTTTGGGCGGTTCCCGCCGGCCGCCGGAGAGATATTCCGGTGGCTTCACTTTCGACTCCATCGGCATCGTTTTTTCATCTCCTCTTCCGGAATAGGGAGCTGAATCTGTTAGAACATCTAATGGATCACTTCAACGTTGACTCAACTACCGTCGGCCATGTGGCGGCGATGCCGTTCCCCGGCCGAGGCCACATCAACCCCATGATGAACCTCTGCAAGTTACTAGCTTCCAAAAACCCTCAACTCCTTGTCACCTTCATCATCACCGAAGAGTGGCTGAGCTTCATCGGCTCCGACCCAAAACCCGACAACATCCGATTCTCCACCATCCCAAACGTCATCCCCGCCGAGCGGCTAAAAGCCGCCGACTTCCCTGGCTTCTACGAAGCTGTCATGACCAAGATGGAAGCTCCCTTCGAGCTCCTCCTCAGCCAGCTCGACCCGCCGGCCACAGCCGTCATAGCTGATATAGAGGTCCGGTGGGGAGTCGGGGTTGGGATTCGGAGGAATATTCCGGTGGCCTTGCTGTGGACTATGCCAGCCACCTTCTTGTCAATGCTGCACCGTTTCAATATTTTCTCACAAAACAAGGACATCCCACTTGAATGTTTTGATTCTGGAGACCAAATTCCAGGGATTTCTTCATCTGATTTAGCAGACCTTGGAGAAGTGTTTCGAAGAACCGACCCGAAAGTCATGAAGCTTGCTGTGGAATGCATTTCATGGGTTCCAAAAGCTCAGTGTCTTCTGTTCACTTCATTTCATGAGCTCGAACCTGAAACCTTCCACTCTTTACAGGCGGAATTCCCATTCCCTGTGTACCCCATTGGTCCTGCCATACCTTACTTGGAGCTTGGAAAGAATTCCTCTGTGTCAGTTGGTGACAATGGCATTGACTATATGAAATGGCTTGATTCCCAACCAATAGCCTCTGTCTTGTACATCTCATTGGGGAGTTTTCTTTCGGTTTCAAACATGCAGATGGATGAAATCGCAGCCGGGCTGAAGCGTAGCGGGGTTCGGTTCTTGTGGGTTGCGCGGGGAGAGGCGGCTCGATTGAGTGAGAGCTACAGTGGTAGTGATGGTACGGGGTTGGTGGTGCCATGGTGTGAGCAACTTAAAGTGTTGTGCCATTCTTCTGTGGGTGGTTTTTGGTCACATTGTGGATGGAATTCGACTTTAGAAGCTGTTTTCGCCGGTGTCCCAATGCTTACTTTTCCTCTTTTTCTCGATCAAATTCCAAACAGCCGGCAAATAGTTGAAGGGTGGAAGATTGGCAGTAGGGTTAAATCAGAGGTACATGATGAAAAGTTGATGACAAGAGAAGAGGTTGCTGAGCTTGTGAAGAGATTTATGGATCCTGAAAGCAGTGATGGGATTGAAATGAGGAGAAGAGCGAAAGAGCTCGGAGATTTGTGTCACCGAGCGATTGCAAAAGGAGGTTCATCTGATACAAATCTTGATGATTTTATCAGGGATATTGGCAAAGCTACCTGCAATCTTCAAACGGAGACACAAGTTCCTTATCCATGA

Protein Analysis

626

Amino Acids

69.41

Weight (kDa)

5.55

Isoelectric Point (pI)

49.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 417 - 570 1.8e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1037
Acc36I ACCTGC 1 cut(s) 1847
AccB1I GGYRCC 1 cut(s) 1444
AccB7I CCANNNNNTGG 1 cut(s) 31
AccBSI CCGCTC 1 cut(s) 697
AccII CGCG 2 cut(s) 228, 1384
AccIII TCCGGA 1 cut(s) 432
AclI AACGTT 1 cut(s) 480
AclWI GGATC 3 cut(s) 477, 1697, 1710
AcoI YGGCCR 5 cut(s) 318, 364, 499, 526, 792
AcsI RAATTY 6 cut(s) 303, 972, 1148, 1207, 1516, 1581
AcuI CTGAAG 1 cut(s) 1370
AcyI GRCGYC 2 cut(s) 6, 255
AdeI CACNNNGTG 1 cut(s) 1508
AfaI GTAC 4 cut(s) 1166, 1286, 1432, 1644
AgsI TTSAA 8 cut(s) 287, 478, 916, 950, 1317, 1607, 1727, 1850
AjiI CACGTC 1 cut(s) 61
AjnI CCWGG 2 cut(s) 718, 976
AjuI GAANNNNNNNTTGG 2 cut(s) 129, 161
Alw21I GWGCWC 4 cut(s) 280, 768, 1116, 1752
Alw26I GTCTC 2 cut(s) 960, 1850
AlwI GGATC 3 cut(s) 477, 1697, 1710
Aor13HI TCCGGA 1 cut(s) 432
AoxI GGCC 8 cut(s) 55, 318, 364, 499, 526, 532, 792, 864
ApeKI GCWGC 2 cut(s) 904, 1340
ApoI RAATTY 6 cut(s) 303, 972, 1148, 1207, 1516, 1581
Asp700I GAANNNNTTC 2 cut(s) 1017, 1207
AspLEI GCGC 2 cut(s) 233, 1384
AspS9I GGNCC 3 cut(s) 158, 820, 1175
AsuC2I CCSGG 3 cut(s) 48, 525, 1345
AsuHPI GGTGA 6 cut(s) 112, 124, 589, 601, 1238, 1757
AsuII TTCGAA 1 cut(s) 1021
AvaII GGWCC 3 cut(s) 158, 820, 1175
BalI TGGCCA 1 cut(s) 320
BamHI GGATCC 1 cut(s) 1702
BanI GGYRCC 1 cut(s) 1444
BanII GRGCYC 4 cut(s) 280, 768, 1116, 1752
BbsI GAAGAC 1 cut(s) 1082
Bbv12I GWGCWC 4 cut(s) 280, 768, 1116, 1752
BbvCI CCTCAGC 1 cut(s) 773
BbvI GCAGC 2 cut(s) 891, 1352
BccI CCATC 9 cut(s) 203, 265, 412, 680, 742, 1321, 1421, 1506, 1712
BceAI ACGGC 4 cut(s) 25, 242, 502, 785
BciT130I CCWGG 2 cut(s) 720, 978
BciVI GTATCC 1 cut(s) 54
BclI TGATCA 1 cut(s) 72
BcnI CCSGG 3 cut(s) 48, 525, 1345
BcoDI GTCTC 2 cut(s) 960, 1850
BfaI CTAG 3 cut(s) 92, 221, 569
BfmI CTRYAG 1 cut(s) 1414
BfoI RGCGCY 1 cut(s) 234
BfuAI ACCTGC 1 cut(s) 1847
BfuI GTATCC 1 cut(s) 54
BisI GCNGC 9 cut(s) 96, 229, 367, 510, 698, 708, 905, 1341, 1395
BlpI GCTNAGC 2 cut(s) 623, 1680
BlsI GCNGC 9 cut(s) 97, 230, 368, 511, 699, 709, 906, 1342, 1396
Bme1390I CCNGG 5 cut(s) 48, 525, 720, 978, 1345
Bme18I GGWCC 3 cut(s) 158, 820, 1175
BmgBI CACGTC 1 cut(s) 61
BmgT120I GGNCC 3 cut(s) 158, 820, 1175
BmiI GGNNCC 6 cut(s) 160, 357, 637, 1074, 1446, 1704
BmrFI CCNGG 5 cut(s) 48, 525, 720, 978, 1345
BmsI GCATC 3 cut(s) 27, 419, 504
BpiI GAAGAC 1 cut(s) 1082
BpmI CTGGAG 2 cut(s) 297, 984
Bpu10I CCTNAGC 1 cut(s) 773
Bpu1102I GCTNAGC 2 cut(s) 623, 1680
Bpu14I TTCGAA 1 cut(s) 1021
BpuMI CCSGG 3 cut(s) 48, 525, 1345
BsaBI GATNNNNATC 1 cut(s) 1800
BsaHI GRCGYC 2 cut(s) 6, 255
BsaI GGTCTC 1 cut(s) 960
BsaJI CCNNGG 7 cut(s) 226, 523, 529, 718, 977, 1006, 1448
BsaWI WCCGGW 4 cut(s) 382, 432, 822, 859
BsaXI ACNNNNNCTCC 3 cut(s) 26, 822, 852
Bse118I RCCGGY 4 cut(s) 362, 790, 1541, 1593
Bse1I ACTGG 1 cut(s) 314
Bse8I GATNNNNATC 1 cut(s) 1800
BseAI TCCGGA 1 cut(s) 432
BseBI CCWGG 2 cut(s) 720, 978
BseDI CCNNGG 7 cut(s) 226, 523, 529, 718, 977, 1006, 1448
BseGI GGATG 8 cut(s) 180, 195, 657, 672, 684, 939, 1336, 1517
BseJI GATNNNNATC 1 cut(s) 1800
BseMII CTCAG 4 cut(s) 614, 787, 1097, 1671
BseNI ACTGG 1 cut(s) 314
BseRI GAGGAG 4 cut(s) 416, 758, 761, 1747
BseX3I CGGCCG 2 cut(s) 364, 526
BseXI GCAGC 2 cut(s) 891, 1352
BsgI GTGCAG 1 cut(s) 890
Bsh1236I CGCG 2 cut(s) 228, 1384
Bsh1285I CGRYCG 3 cut(s) 301, 367, 529
BshFI GGCC 8 cut(s) 57, 320, 366, 501, 528, 534, 794, 866
BshNI GGYRCC 1 cut(s) 1444
BsiEI CGRYCG 3 cut(s) 301, 367, 529
BsiHKAI GWGCWC 4 cut(s) 280, 768, 1116, 1752
BslFI GGGAC 1 cut(s) 1532
BsmAI GTCTC 2 cut(s) 960, 1850
BsmFI GGGAC 1 cut(s) 1532
BsmI GAATGC 1 cut(s) 1064
BsnI GGCC 8 cut(s) 57, 320, 366, 501, 528, 534, 794, 866
Bso31I GGTCTC 1 cut(s) 960
Bsp119I TTCGAA 1 cut(s) 1021
Bsp1286I GDGCHC 4 cut(s) 280, 768, 1116, 1752
Bsp13I TCCGGA 1 cut(s) 432
Bsp1407I TGTACA 1 cut(s) 1284
Bsp143I GATC 5 cut(s) 72, 298, 469, 1576, 1702
Bsp1720I GCTNAGC 2 cut(s) 623, 1680
Bsp19I CCATGG 1 cut(s) 1448
BspANI GGCC 8 cut(s) 57, 320, 366, 501, 528, 534, 794, 866
BspCNI CTCAG 4 cut(s) 615, 786, 1096, 1672
BspEI TCCGGA 1 cut(s) 432
BspFNI CGCG 2 cut(s) 228, 1384
BspHI TCATGA 3 cut(s) 738, 1041, 1108
BspLI GGNNCC 6 cut(s) 160, 357, 637, 1074, 1446, 1704
BspMI ACCTGC 1 cut(s) 1847
BspPI GGATC 3 cut(s) 477, 1697, 1710
BspQI GCTCTTC 1 cut(s) 1732
BspT104I TTCGAA 1 cut(s) 1021
BspT107I GGYRCC 1 cut(s) 1444
BspTNI GGTCTC 1 cut(s) 960
BsrBI CCGCTC 1 cut(s) 697
BsrFI RCCGGY 4 cut(s) 362, 790, 1541, 1593
BsrGI TGTACA 1 cut(s) 1284
BsrI ACTGG 1 cut(s) 314
BssAI RCCGGY 4 cut(s) 362, 790, 1541, 1593
BssECI CCNNGG 7 cut(s) 226, 523, 529, 718, 977, 1006, 1448
BssMI GATC 5 cut(s) 72, 298, 469, 1576, 1702
BssNI GRCGYC 2 cut(s) 6, 255
BssT1I CCWWGG 2 cut(s) 1006, 1448
Bst2UI CCWGG 2 cut(s) 720, 978
Bst4CI ACNGT 4 cut(s) 124, 496, 911, 1418
Bst6I CTCTTC 6 cut(s) 132, 434, 609, 1665, 1685, 1732
BstACI GRCGYC 2 cut(s) 6, 255
BstAUI TGTACA 1 cut(s) 1284
BstBI TTCGAA 1 cut(s) 1021
BstC8I GCNNGC 6 cut(s) 364, 779, 792, 885, 1050, 1595
BstDEI CTNAG 4 cut(s) 623, 773, 1083, 1680
BstDSI CCRYGG 2 cut(s) 226, 1448
BstF5I GGATG 8 cut(s) 180, 195, 657, 672, 684, 939, 1336, 1517
BstFNI CGCG 2 cut(s) 228, 1384
BstH2I RGCGCY 1 cut(s) 234
BstHHI GCGC 2 cut(s) 233, 1384
BstKTI GATC 5 cut(s) 75, 301, 472, 1579, 1705
BstMAI GTCTC 2 cut(s) 960, 1850
BstMBI GATC 5 cut(s) 72, 298, 469, 1576, 1702
BstMCI CGRYCG 3 cut(s) 301, 367, 529
BstMWI GCNNNNNNNGC 5 cut(s) 359, 633, 787, 806, 1538
BstNI CCWGG 2 cut(s) 720, 978
BstNSI RCATGY 1 cut(s) 1324
BstSCI CCNGG 5 cut(s) 46, 523, 718, 976, 1343
BstSFI CTRYAG 1 cut(s) 1414
BstUI CGCG 2 cut(s) 228, 1384
BstV1I GCAGC 2 cut(s) 891, 1352
BstV2I GAAGAC 1 cut(s) 1082
BstX2I RGATCY 1 cut(s) 1702
BstYI RGATCY 1 cut(s) 1702
BstZI CGGCCG 2 cut(s) 364, 526
BsuI GTATCC 1 cut(s) 54
BsuRI GGCC 8 cut(s) 57, 320, 366, 501, 528, 534, 794, 866
BtgI CCRYGG 2 cut(s) 226, 1448
BtgZI GCGATG 2 cut(s) 50, 527
BtrI CACGTC 1 cut(s) 61
BtsCI GGATG 8 cut(s) 180, 195, 657, 672, 684, 939, 1336, 1517
BtsI GCAGTG 1 cut(s) 1720
BtsIMutI CAGTG 4 cut(s) 321, 1091, 1423, 1720
BveI ACCTGC 1 cut(s) 1847
Cac8I GCNNGC 6 cut(s) 364, 779, 792, 885, 1050, 1595
CciI TCATGA 3 cut(s) 738, 1041, 1108
CfoI GCGC 2 cut(s) 233, 1384
Cfr10I RCCGGY 4 cut(s) 362, 790, 1541, 1593
Cfr13I GGNCC 3 cut(s) 158, 820, 1175
Cfr42I CCGCGG 1 cut(s) 229
CseI GACGC 2 cut(s) 14, 263
Csp6I GTAC 4 cut(s) 1165, 1285, 1431, 1643
CviQI GTAC 4 cut(s) 1165, 1285, 1431, 1643
DdeI CTNAG 4 cut(s) 623, 773, 1083, 1680
DpnI GATC 5 cut(s) 74, 300, 471, 1578, 1704
DpnII GATC 5 cut(s) 72, 298, 469, 1576, 1702
DraIII CACNNNGTG 1 cut(s) 1508
DrdI GACNNNNNNGTC 1 cut(s) 1037
DseDI GACNNNNNNGTC 1 cut(s) 1037
EaeI YGGCCR 5 cut(s) 318, 364, 499, 526, 792
EagI CGGCCG 2 cut(s) 364, 526
Eam1104I CTCTTC 6 cut(s) 132, 434, 609, 1665, 1685, 1732
EarI CTCTTC 6 cut(s) 132, 434, 609, 1665, 1685, 1732
EciI GGCGGA 1 cut(s) 1160
Ecl136II GAGCTC 4 cut(s) 278, 766, 1114, 1750
EclXI CGGCCG 2 cut(s) 364, 526
Eco130I CCWWGG 2 cut(s) 1006, 1448
Eco24I GRGCYC 4 cut(s) 280, 768, 1116, 1752
Eco31I GGTCTC 1 cut(s) 960
Eco47I GGWCC 3 cut(s) 158, 820, 1175
Eco52I CGGCCG 2 cut(s) 364, 526
Eco53kI GAGCTC 4 cut(s) 278, 766, 1114, 1750
Eco57I CTGAAG 1 cut(s) 1370
EcoICRI GAGCTC 4 cut(s) 278, 766, 1114, 1750
EcoO109I RGGNCCY 1 cut(s) 158
EcoRI GAATTC 4 cut(s) 303, 1148, 1207, 1516
EcoRII CCWGG 2 cut(s) 718, 976
EcoT14I CCWWGG 2 cut(s) 1006, 1448
EcoT22I ATGCAT 1 cut(s) 1064
EcoT38I GRGCYC 4 cut(s) 280, 768, 1116, 1752
ErhI CCWWGG 2 cut(s) 1006, 1448
FalI AAGNNNNNCTT 2 cut(s) 129, 161
FaqI GGGAC 1 cut(s) 1532
FauI CCCGC 6 cut(s) 250, 367, 697, 795, 1352, 1377
FbaI TGATCA 1 cut(s) 72
Fnu4HI GCNGC 9 cut(s) 96, 229, 367, 510, 698, 708, 905, 1341, 1395
FokI GGATG 8 cut(s) 167, 182, 644, 659, 671, 926, 1343, 1524
FriOI GRGCYC 4 cut(s) 280, 768, 1116, 1752
Fsp4HI GCNGC 9 cut(s) 96, 229, 367, 510, 698, 708, 905, 1341, 1395
FspBI CTAG 3 cut(s) 92, 221, 569
GlaI GCGC 2 cut(s) 232, 1383
GluI GCNGC 9 cut(s) 96, 229, 367, 510, 698, 708, 905, 1341, 1395
GsuI CTGGAG 2 cut(s) 297, 984
HaeII RGCGCY 1 cut(s) 234
HaeIII GGCC 8 cut(s) 57, 320, 366, 501, 528, 534, 794, 866
HgaI GACGC 2 cut(s) 14, 263
HhaI GCGC 2 cut(s) 233, 1384
Hin1I GRCGYC 2 cut(s) 6, 255
Hin6I GCGC 2 cut(s) 231, 1382
HinP1I GCGC 2 cut(s) 231, 1382
HincII GTYRAC 2 cut(s) 64, 484
HindII GTYRAC 2 cut(s) 64, 484
HindIII AAGCTT 1 cut(s) 1046
HinfI GANTC 9 cut(s) 150, 400, 448, 485, 663, 831, 844, 959, 1259
HphI GGTGA 6 cut(s) 112, 124, 589, 601, 1238, 1757
Hpy166II GTNNAC 5 cut(s) 64, 484, 876, 1098, 1165
Hpy188I TCNGA 8 cut(s) 217, 640, 662, 849, 994, 1639, 1754, 1795
Hpy188III TCNNGA 8 cut(s) 433, 739, 963, 1042, 1109, 1574, 1706, 1805
Hpy8I GTNNAC 5 cut(s) 64, 484, 876, 1098, 1165
Hpy99I CGWCG 4 cut(s) 128, 131, 257, 500
HpyAV CCTTC 6 cut(s) 218, 610, 769, 901, 1138, 1601
HpyCH4III ACNGT 4 cut(s) 124, 496, 911, 1418
HpyCH4IV ACGT 4 cut(s) 60, 204, 480, 681
HpyCH4V TGCA 7 cut(s) 84, 561, 907, 1062, 1324, 1778, 1842
HpyF10VI GCNNNNNNNGC 5 cut(s) 359, 633, 787, 806, 1538
HpyF3I CTNAG 4 cut(s) 623, 773, 1083, 1680
HpySE526I ACGT 4 cut(s) 60, 204, 480, 681
Hsp92I GRCGYC 2 cut(s) 6, 255
HspAI GCGC 2 cut(s) 231, 1382
Kpn2I TCCGGA 1 cut(s) 432
KroI GCCGGC 3 cut(s) 362, 790, 1593
KroNI GCCGGC 3 cut(s) 364, 792, 1595
Ksp22I TGATCA 1 cut(s) 72
KspI CCGCGG 1 cut(s) 229
Kzo9I GATC 5 cut(s) 72, 298, 469, 1576, 1702
LguI GCTCTTC 1 cut(s) 1732
LmnI GCTCC 7 cut(s) 275, 283, 442, 641, 760, 771, 1195
Lsp1109I GCAGC 2 cut(s) 891, 1352
LweI GCATC 3 cut(s) 27, 419, 504
MaeI CTAG 3 cut(s) 92, 221, 569
MaeII ACGT 4 cut(s) 60, 204, 480, 681
MaeIII GTNAC 6 cut(s) 130, 564, 595, 1226, 1500, 1763
MalI GATC 5 cut(s) 74, 300, 471, 1578, 1704
MbiI CCGCTC 1 cut(s) 697
MboI GATC 5 cut(s) 72, 298, 469, 1576, 1702
MflI RGATCY 1 cut(s) 1702
MhlI GDGCHC 4 cut(s) 280, 768, 1116, 1752
MlsI TGGCCA 1 cut(s) 320
MluCI AATT 7 cut(s) 86, 303, 972, 1148, 1207, 1516, 1581
MluNI TGGCCA 1 cut(s) 320
MlyI GAGTC 3 cut(s) 394, 479, 840
MmeI TCCRAC 1 cut(s) 663
Mox20I TGGCCA 1 cut(s) 320
Mph1103I ATGCAT 1 cut(s) 1064
MroI TCCGGA 1 cut(s) 432
MroNI GCCGGC 3 cut(s) 362, 790, 1593
MroXI GAANNNNTTC 2 cut(s) 1017, 1207
MscI TGGCCA 1 cut(s) 320
MseI TTAA 2 cut(s) 1464, 1632
MslI CAYNNNNRTG 2 cut(s) 949, 1325
Msp20I TGGCCA 1 cut(s) 320
MspA1I CMGCKG 1 cut(s) 228
MspR9I CCNGG 5 cut(s) 48, 525, 720, 978, 1345
Mva1269I GAATGC 1 cut(s) 1064
MvaI CCWGG 2 cut(s) 720, 978
MvnI CGCG 2 cut(s) 228, 1384
MwoI GCNNNNNNNGC 5 cut(s) 359, 633, 787, 806, 1538
NaeI GCCGGC 3 cut(s) 364, 792, 1595
NciI CCSGG 3 cut(s) 48, 525, 1345
NcoI CCATGG 1 cut(s) 1448
NdeII GATC 5 cut(s) 72, 298, 469, 1576, 1702
NgoMIV GCCGGC 3 cut(s) 362, 790, 1593
NlaIV GGNNCC 6 cut(s) 160, 357, 637, 1074, 1446, 1704
NmeAIII GCCGAG 2 cut(s) 554, 718
NmuCI GTSAC 5 cut(s) 130, 595, 1226, 1500, 1763
NsiI ATGCAT 1 cut(s) 1064
NspI RCATGY 1 cut(s) 1324
NspV TTCGAA 1 cut(s) 1021
PagI TCATGA 3 cut(s) 738, 1041, 1108
PciSI GCTCTTC 1 cut(s) 1732
PcsI WCGNNNNNNNCGW 1 cut(s) 132
PctI GAATGC 1 cut(s) 1064
PdiI GCCGGC 3 cut(s) 364, 792, 1595
PdmI GAANNNNTTC 2 cut(s) 1017, 1207
PfeI GAWTC 6 cut(s) 150, 448, 663, 844, 959, 1259
PflMI CCANNNNNTGG 1 cut(s) 31
PkrI GCNGC 9 cut(s) 97, 230, 368, 511, 699, 709, 906, 1342, 1396
Ple19I CGATCG 1 cut(s) 301
PleI GAGTC 3 cut(s) 394, 479, 839
PpsI GAGTC 3 cut(s) 394, 479, 839
PpuMI RGGWCCY 1 cut(s) 158
Psp124BI GAGCTC 4 cut(s) 280, 768, 1116, 1752
Psp1406I AACGTT 1 cut(s) 480
Psp5II RGGWCCY 1 cut(s) 158
Psp6I CCWGG 2 cut(s) 718, 976
PspGI CCWGG 2 cut(s) 718, 976
PspN4I GGNNCC 6 cut(s) 160, 357, 637, 1074, 1446, 1704
PspPI GGNCC 3 cut(s) 158, 820, 1175
PspPPI RGGWCCY 1 cut(s) 158
PsuI RGATCY 1 cut(s) 1702
PvuI CGATCG 1 cut(s) 301
RsaI GTAC 4 cut(s) 1166, 1286, 1432, 1644
RsaNI GTAC 4 cut(s) 1165, 1285, 1431, 1643
RseI CAYNNNNRTG 2 cut(s) 949, 1325
SacI GAGCTC 4 cut(s) 280, 768, 1116, 1752
SacII CCGCGG 1 cut(s) 229
SapI GCTCTTC 1 cut(s) 1732
SaqAI TTAA 2 cut(s) 1464, 1632
SatI GCNGC 9 cut(s) 96, 229, 367, 510, 698, 708, 905, 1341, 1395
Sau3AI GATC 5 cut(s) 72, 298, 469, 1576, 1702
Sau96I GGNCC 3 cut(s) 158, 820, 1175
SchI GAGTC 3 cut(s) 394, 479, 840
ScrFI CCNGG 5 cut(s) 48, 525, 720, 978, 1345
SduI GDGCHC 4 cut(s) 280, 768, 1116, 1752
SfaNI GCATC 3 cut(s) 27, 419, 504
SfcI CTRYAG 1 cut(s) 1414
Sfr303I CCGCGG 1 cut(s) 229
SfuI TTCGAA 1 cut(s) 1021
SgrAI CRCCGGYG 1 cut(s) 1541
SgrBI CCGCGG 1 cut(s) 229
SinI GGWCC 3 cut(s) 158, 820, 1175
SmiMI CAYNNNNRTG 2 cut(s) 949, 1325
Sse9I AATT 7 cut(s) 86, 303, 972, 1148, 1207, 1516, 1581
SspI AATATT 2 cut(s) 856, 919
SspMI CTAG 3 cut(s) 92, 221, 569
SstI GAGCTC 4 cut(s) 280, 768, 1116, 1752
StyD4I CCNGG 5 cut(s) 46, 523, 718, 976, 1343
StyI CCWWGG 2 cut(s) 1006, 1448
TaaI ACNGT 4 cut(s) 124, 496, 911, 1418
TaiI ACGT 4 cut(s) 63, 207, 483, 684
TasI AATT 7 cut(s) 86, 303, 972, 1148, 1207, 1516, 1581
TatI WGTACW 1 cut(s) 1284
TauI GCSGC 7 cut(s) 98, 231, 369, 512, 700, 710, 1397
TfiI GAWTC 6 cut(s) 150, 448, 663, 844, 959, 1259
Tru1I TTAA 2 cut(s) 1464, 1632
Tru9I TTAA 2 cut(s) 1464, 1632
TscAI CASTG 4 cut(s) 321, 1091, 1423, 1720
TseFI GTSAC 5 cut(s) 130, 595, 1226, 1500, 1763
TseI GCWGC 2 cut(s) 904, 1340
Tsp45I GTSAC 5 cut(s) 130, 595, 1226, 1500, 1763
TspGWI ACGGA 3 cut(s) 201, 270, 1868
TspRI CASTG 4 cut(s) 321, 1091, 1423, 1720
Van91I CCANNNNNTGG 1 cut(s) 31
VpaK11BI GGWCC 3 cut(s) 158, 820, 1175
XapI RAATTY 6 cut(s) 303, 972, 1148, 1207, 1516, 1581
XceI RCATGY 1 cut(s) 1324
XcmI CCANNNNNNNNNTGG 1 cut(s) 1189
XmnI GAANNNNTTC 2 cut(s) 1017, 1207
XspI CTAG 3 cut(s) 92, 221, 569
Zsp2I ATGCAT 1 cut(s) 1064
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.