RchiOBHm_Chr5g0071471

UDP-glycosyltransferase 87A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000228
Physical Location & Seq
Reverse (-)
77292267 .. 77294753
2487 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34655

Sequence Viewer

Length: 1479 bp
ATGGATGGGCGGAAGTATATAGGCCATTTTTTTTTTCGGTCTGATGAGGTATACAAAATAAGGCCCCAACTGCACGTTCGTTCTCTATTAAATCTCTATCCGATTTCATCAAACAATTCCGACATGGATTCCGGCCGCAAAGAACCAACCACCGTCTGCCACGTAGTGGCCATACCCTATCCCGGCCGGGGCCACGTCAACCCCATGATGAACCTCTGCAAGTTACTAGCTTCACAAAACAGCAACGTTCTCATCACCTTCGTCGTCACAGAAGAGTGGCTCGGCTTCATCGGTTCGGAACCAAAGCCGGACAACGTTGTCTTCGCCACAATCCCCAACGTTATCCCATCGGAGCTGGTCCGCGCAGCCCACATGGTTGCCTTCTTCGAAGCTCTCATGACCAAAATGGAAGCTCCGTTTGATCTGCTCGTGGATCGGCTGGAGCCGCCGCCGAGTTTGATACTGGGTGACACTTACCTGCCTTGGGCAGTTCGTGTCGGCAACCGGAGGAGGATCCCGGCGGCGTCGTTTTGGCCGATGTCGGCGTCCGTTTTCTCGGTGTTCCAACATTTTCATCTTCTAAAGGAAAATGGTCATTTCCCTATTGACTTGTCGGAGAAGGGCAATGACCGTGTCGATTACATCCCTGGAGTTTCTTCTACACCAATCCAAGACTTTCCCCCTTTGATGCATGGAAAAACCCCAACTATACTCCGTGTCGTTCTTGAAGCATTTTCCTGGGTACCTAAAGCACAATACCTCTTATTCTCATCCATCTATGAGCTTGAAACCGAAGTCATTGACGTTTTAAGATCAGAATTCTCACTACCAATTTACACAGTTGGCCCATTAATACCTTACTTCAAAGCTAATGACCACCTGAGTAATGTTGACCATTCACAATGGCTAGATTCTCAACCTTGTAGCTCGGTCTTGTACATCTCCATGGGAAGCTTTTTGTCAGTTTCTAGTGCCCAAATGGATGAGATTGCAGCTGGTTTTCACAAAAGCGGTGTCCGGTTCTTCTGGGTAGCTCGTGGTGATACCGGTAGGTTACAAGAGGTTTGTGGTGATAAGGGGTTAGTAGTGCCGTGGTGTGACCAATTGAGTTTGTTGAACCATTCTTGCATAGGGGGTTTCTTGACACATTGTGGGTGGAACTCAGTTAAAGAAGGTGTTTCCGCCGGTATTCCTTTTCTTACCTTTCCATTAAATATAGATCAAGGTATGAATGGGAAGGCGATTGTGGAGGATTGGAAGATTGGGTGGAGGGTGAAGAGTACTGAGGCTAAAATAGATCATTTGGTGACGAGCGAGGAAATTGCAGGGTTGGTGAAGAAATTTATGGATTTGGAGGACGGGGAAGGGAAAGACATGAGGAGAAGAGCCAGAGAGTTTCAGCAGATATGTCATGGTGCAATTGCAGAGGGTGGATCATCTGAAAGTAACATTAGCACCTTCATTAGTGACATTTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

492

Amino Acids

55.0

Weight (kDa)

5.82

Isoelectric Point (pI)

39.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 304 - 420 3.4e-18 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 317
Acc36I ACCTGC 1 cut(s) 486
Acc65I GGTACC 1 cut(s) 742
AccB1I GGYRCC 1 cut(s) 742
AccB7I CCANNNNNTGG 1 cut(s) 166
AccI GTMKAC 1 cut(s) 51
AccII CGCG 1 cut(s) 363
AciI CCGC 8 cut(s) 10, 136, 361, 446, 449, 521, 1011, 1182
AclI AACGTT 3 cut(s) 246, 315, 339
AclWI GGATC 4 cut(s) 441, 508, 521, 1441
AcoI YGGCCR 4 cut(s) 133, 168, 184, 533
AcsI RAATTY 2 cut(s) 818, 1340
AcyI GRCGYC 2 cut(s) 524, 545
AdeI CACNNNGTG 2 cut(s) 166, 1151
AfaI GTAC 3 cut(s) 744, 938, 1282
AfiI CCNNNNNNNGG 4 cut(s) 166, 182, 188, 484
AgeI ACCGGT 1 cut(s) 1046
AgsI TTSAA 4 cut(s) 728, 788, 865, 1117
AjiI CACGTC 1 cut(s) 196
AjnI CCWGG 2 cut(s) 646, 737
AjuI GAANNNNNNNTTGG 2 cut(s) 60, 92
AlwI GGATC 4 cut(s) 441, 508, 521, 1441
AoxI GGCC 8 cut(s) 22, 62, 133, 168, 184, 190, 533, 844
ApeKI GCWGC 2 cut(s) 365, 992
ApoI RAATTY 2 cut(s) 818, 1340
ArsI GACNNNNNNTTYG 2 cut(s) 999, 1031
AseI ATTAAT 1 cut(s) 851
AsiGI ACCGGT 1 cut(s) 1046
Asp718I GGTACC 1 cut(s) 742
AspLEI GCGC 1 cut(s) 365
AspS9I GGNCC 4 cut(s) 63, 190, 358, 845
AsuC2I CCSGG 3 cut(s) 183, 188, 518
AsuHPI GGTGA 7 cut(s) 247, 479, 1052, 1082, 1285, 1318, 1345
AsuII TTCGAA 1 cut(s) 387
AvaII GGWCC 1 cut(s) 358
BaeGI GKGCMC 1 cut(s) 976
BalI TGGCCA 1 cut(s) 170
BamHI GGATCC 1 cut(s) 513
BanI GGYRCC 1 cut(s) 742
BauI CACGAG 2 cut(s) 428, 1035
BbsI GAAGAC 1 cut(s) 313
BbvI GCAGC 2 cut(s) 377, 1004
BccI CCATC 2 cut(s) 355, 782
BceAI ACGGC 1 cut(s) 1075
BcgI CGANNNNNNTGC 2 cut(s) 1304, 1338
BciT130I CCWGG 2 cut(s) 648, 739
BcnI CCSGG 3 cut(s) 183, 188, 518
BfaI CTAG 3 cut(s) 227, 908, 969
BfuAI ACCTGC 1 cut(s) 486
BisI GCNGC 6 cut(s) 136, 366, 446, 449, 522, 993
BlsI GCNGC 6 cut(s) 137, 367, 447, 450, 523, 994
BmcAI AGTACT 1 cut(s) 1282
Bme1390I CCNGG 5 cut(s) 183, 188, 518, 648, 739
Bme18I GGWCC 1 cut(s) 358
BmgBI CACGTC 1 cut(s) 196
BmgT120I GGNCC 4 cut(s) 63, 190, 358, 845
BmiI GGNNCC 6 cut(s) 65, 191, 300, 444, 515, 744
BmrFI CCNGG 5 cut(s) 183, 188, 518, 648, 739
BmrI ACTGGG 1 cut(s) 473
BmsI GCATC 1 cut(s) 678
BmuI ACTGGG 1 cut(s) 473
BpiI GAAGAC 1 cut(s) 313
BpmI CTGGAG 2 cut(s) 461, 669
Bpu14I TTCGAA 1 cut(s) 387
BpuMI CCSGG 3 cut(s) 183, 188, 518
BsaAI YACGTR 1 cut(s) 163
BsaHI GRCGYC 2 cut(s) 524, 545
BsaJI CCNNGG 6 cut(s) 187, 482, 646, 738, 945, 1091
BsaWI WCCGGW 3 cut(s) 504, 1017, 1046
Bsc4I CCNNNNNNNGG 4 cut(s) 166, 182, 188, 484
Bse118I RCCGGY 2 cut(s) 1046, 1184
Bse1I ACTGG 1 cut(s) 468
Bse3DI GCAATG 1 cut(s) 631
BseBI CCWGG 2 cut(s) 648, 739
BseDI CCNNGG 6 cut(s) 187, 482, 646, 738, 945, 1091
BseGI GGATG 4 cut(s) 10, 642, 770, 988
BseLI CCNNNNNNNGG 4 cut(s) 166, 182, 188, 484
BseMI GCAATG 1 cut(s) 631
BseMII CTCAG 3 cut(s) 872, 1176, 1275
BseNI ACTGG 1 cut(s) 468
BseRI GAGGAG 2 cut(s) 523, 1393
BseSI GKGCMC 1 cut(s) 976
BseX3I CGGCCG 2 cut(s) 133, 184
BseXI GCAGC 2 cut(s) 377, 1004
BsgI GTGCAG 1 cut(s) 56
Bsh1236I CGCG 1 cut(s) 363
Bsh1285I CGRYCG 2 cut(s) 136, 187
BshFI GGCC 8 cut(s) 24, 64, 135, 170, 186, 192, 535, 846
BshNI GGYRCC 1 cut(s) 742
BshTI ACCGGT 1 cut(s) 1046
BsiEI CGRYCG 2 cut(s) 136, 187
BsiSI CCGG 9 cut(s) 132, 183, 187, 308, 505, 518, 1018, 1047, 1185
BslI CCNNNNNNNGG 4 cut(s) 166, 182, 188, 484
BsnI GGCC 8 cut(s) 24, 64, 135, 170, 186, 192, 535, 846
Bsp119I TTCGAA 1 cut(s) 387
Bsp1286I GDGCHC 1 cut(s) 976
Bsp1407I TGTACA 1 cut(s) 936
Bsp143I GATC 7 cut(s) 421, 433, 513, 812, 1219, 1297, 1433
Bsp19I CCATGG 1 cut(s) 945
BspACI CCGC 8 cut(s) 10, 136, 361, 446, 449, 521, 1011, 1182
BspANI GGCC 8 cut(s) 24, 64, 135, 170, 186, 192, 535, 846
BspCNI CTCAG 3 cut(s) 873, 1175, 1276
BspFNI CGCG 1 cut(s) 363
BspHI TCATGA 1 cut(s) 396
BspLI GGNNCC 6 cut(s) 65, 191, 300, 444, 515, 744
BspMI ACCTGC 1 cut(s) 486
BspPI GGATC 4 cut(s) 441, 508, 521, 1441
BspQI GCTCTTC 1 cut(s) 1378
BspT104I TTCGAA 1 cut(s) 387
BspT107I GGYRCC 1 cut(s) 742
BsrDI GCAATG 1 cut(s) 631
BsrFI RCCGGY 2 cut(s) 1046, 1184
BsrGI TGTACA 1 cut(s) 936
BsrI ACTGG 1 cut(s) 468
BssAI RCCGGY 2 cut(s) 1046, 1184
BssECI CCNNGG 6 cut(s) 187, 482, 646, 738, 945, 1091
BssMI GATC 7 cut(s) 421, 433, 513, 812, 1219, 1297, 1433
BssNAI GTATAC 1 cut(s) 52
BssNI GRCGYC 2 cut(s) 524, 545
BssSI CACGAG 2 cut(s) 428, 1035
BssT1I CCWWGG 2 cut(s) 482, 945
Bst1107I GTATAC 1 cut(s) 52
Bst2BI CACGAG 2 cut(s) 428, 1035
Bst2UI CCWGG 2 cut(s) 648, 739
Bst4CI ACNGT 3 cut(s) 154, 632, 841
Bst6I CTCTTC 3 cut(s) 267, 1271, 1378
BstACI GRCGYC 2 cut(s) 524, 545
BstAUI TGTACA 1 cut(s) 936
BstBAI YACGTR 1 cut(s) 163
BstBI TTCGAA 1 cut(s) 387
BstDEI CTNAG 3 cut(s) 881, 1162, 1284
BstDSI CCRYGG 2 cut(s) 945, 1091
BstF5I GGATG 4 cut(s) 10, 642, 770, 988
BstFNI CGCG 1 cut(s) 363
BstHHI GCGC 1 cut(s) 365
BstKTI GATC 7 cut(s) 424, 436, 516, 815, 1222, 1300, 1436
BstMBI GATC 7 cut(s) 421, 433, 513, 812, 1219, 1297, 1433
BstMCI CGRYCG 2 cut(s) 136, 187
BstMWI GCNNNNNNNGC 2 cut(s) 70, 445
BstNI CCWGG 2 cut(s) 648, 739
BstSCI CCNGG 5 cut(s) 181, 186, 516, 646, 737
BstSLI GKGCMC 1 cut(s) 976
BstUI CGCG 1 cut(s) 363
BstV1I GCAGC 2 cut(s) 377, 1004
BstV2I GAAGAC 1 cut(s) 313
BstX2I RGATCY 1 cut(s) 513
BstYI RGATCY 1 cut(s) 513
BstZ17I GTATAC 1 cut(s) 52
BstZI CGGCCG 2 cut(s) 133, 184
BsuRI GGCC 8 cut(s) 24, 64, 135, 170, 186, 192, 535, 846
BtgI CCRYGG 2 cut(s) 945, 1091
BtrI CACGTC 1 cut(s) 196
BtsCI GGATG 4 cut(s) 10, 642, 770, 988
BveI ACCTGC 1 cut(s) 486
CciI TCATGA 1 cut(s) 396
CfoI GCGC 1 cut(s) 365
Cfr10I RCCGGY 2 cut(s) 1046, 1184
Cfr13I GGNCC 4 cut(s) 63, 190, 358, 845
CseI GACGC 2 cut(s) 513, 534
Csp6I GTAC 3 cut(s) 743, 937, 1281
CspAI ACCGGT 1 cut(s) 1046
CviAII CATG 8 cut(s) 124, 205, 373, 397, 692, 946, 1375, 1412
CviQI GTAC 3 cut(s) 743, 937, 1281
DdeI CTNAG 3 cut(s) 881, 1162, 1284
DpnI GATC 7 cut(s) 423, 435, 515, 814, 1221, 1299, 1435
DpnII GATC 7 cut(s) 421, 433, 513, 812, 1219, 1297, 1433
DraIII CACNNNGTG 2 cut(s) 166, 1151
DrdI GACNNNNNNGTC 1 cut(s) 317
DseDI GACNNNNNNGTC 1 cut(s) 317
EaeI YGGCCR 4 cut(s) 133, 168, 184, 533
EagI CGGCCG 2 cut(s) 133, 184
Eam1104I CTCTTC 3 cut(s) 267, 1271, 1378
EarI CTCTTC 3 cut(s) 267, 1271, 1378
EciI GGCGGA 2 cut(s) 25, 1171
EclXI CGGCCG 2 cut(s) 133, 184
Eco130I CCWWGG 2 cut(s) 482, 945
Eco47I GGWCC 1 cut(s) 358
Eco52I CGGCCG 2 cut(s) 133, 184
EcoO109I RGGNCCY 1 cut(s) 63
EcoRI GAATTC 1 cut(s) 818
EcoRII CCWGG 2 cut(s) 646, 737
EcoT14I CCWWGG 2 cut(s) 482, 945
EcoT22I ATGCAT 1 cut(s) 693
ErhI CCWWGG 2 cut(s) 482, 945
FaeI CATG 8 cut(s) 127, 208, 376, 400, 695, 949, 1378, 1415
FatI CATG 8 cut(s) 123, 204, 372, 396, 691, 945, 1374, 1411
FblI GTMKAC 1 cut(s) 51
Fnu4HI GCNGC 6 cut(s) 136, 366, 446, 449, 522, 993
FokI GGATG 4 cut(s) 17, 629, 757, 995
Fsp4HI GCNGC 6 cut(s) 136, 366, 446, 449, 522, 993
FspBI CTAG 3 cut(s) 227, 908, 969
GlaI GCGC 1 cut(s) 364
GluI GCNGC 6 cut(s) 136, 366, 446, 449, 522, 993
GsuI CTGGAG 2 cut(s) 461, 669
HaeIII GGCC 8 cut(s) 24, 64, 135, 170, 186, 192, 535, 846
HapII CCGG 9 cut(s) 132, 183, 187, 308, 505, 518, 1018, 1047, 1185
HgaI GACGC 2 cut(s) 513, 534
HhaI GCGC 1 cut(s) 365
Hin1I GRCGYC 2 cut(s) 524, 545
Hin1II CATG 8 cut(s) 127, 208, 376, 400, 695, 949, 1378, 1415
Hin6I GCGC 1 cut(s) 363
HinP1I GCGC 1 cut(s) 363
HincII GTYRAC 2 cut(s) 199, 892
HindII GTYRAC 2 cut(s) 199, 892
HindIII AAGCTT 1 cut(s) 952
HinfI GANTC 2 cut(s) 128, 911
HpaII CCGG 9 cut(s) 132, 183, 187, 308, 505, 518, 1018, 1047, 1185
HphI GGTGA 7 cut(s) 247, 479, 1052, 1082, 1285, 1318, 1345
Hpy166II GTNNAC 3 cut(s) 52, 199, 892
Hpy188I TCNGA 8 cut(s) 43, 102, 121, 298, 352, 616, 817, 1441
Hpy188III TCNNGA 3 cut(s) 397, 725, 1141
Hpy8I GTNNAC 3 cut(s) 52, 199, 892
Hpy99I CGWCG 2 cut(s) 266, 529
HpyAV CCTTC 7 cut(s) 268, 391, 613, 1166, 1231, 1358, 1468
HpyCH4III ACNGT 3 cut(s) 154, 632, 841
HpyCH4IV ACGT 7 cut(s) 75, 162, 195, 246, 315, 339, 804
HpyCH4V TGCA 8 cut(s) 73, 219, 691, 992, 1128, 1325, 1418, 1424
HpyF10VI GCNNNNNNNGC 2 cut(s) 70, 445
HpyF3I CTNAG 3 cut(s) 881, 1162, 1284
HpySE526I ACGT 7 cut(s) 75, 162, 195, 246, 315, 339, 804
Hsp92I GRCGYC 2 cut(s) 524, 545
Hsp92II CATG 8 cut(s) 127, 208, 376, 400, 695, 949, 1378, 1415
HspAI GCGC 1 cut(s) 363
KpnI GGTACC 1 cut(s) 746
Kzo9I GATC 7 cut(s) 421, 433, 513, 812, 1219, 1297, 1433
LguI GCTCTTC 1 cut(s) 1378
LmnI GCTCC 3 cut(s) 352, 418, 442
Lsp1109I GCAGC 2 cut(s) 377, 1004
LweI GCATC 1 cut(s) 678
MaeI CTAG 3 cut(s) 227, 908, 969
MaeII ACGT 7 cut(s) 75, 162, 195, 246, 315, 339, 804
MaeIII GTNAC 8 cut(s) 222, 265, 467, 1053, 1097, 1306, 1445, 1466
MalI GATC 7 cut(s) 423, 435, 515, 814, 1221, 1299, 1435
MboI GATC 7 cut(s) 421, 433, 513, 812, 1219, 1297, 1433
MfeI CAATTG 2 cut(s) 1103, 1419
MflI RGATCY 1 cut(s) 513
MhlI GDGCHC 1 cut(s) 976
MlsI TGGCCA 1 cut(s) 170
MluCI AATT 7 cut(s) 115, 818, 831, 1103, 1320, 1340, 1419
MluNI TGGCCA 1 cut(s) 170
MmeI TCCRAC 3 cut(s) 144, 589, 594
Mox20I TGGCCA 1 cut(s) 170
Mph1103I ATGCAT 1 cut(s) 693
MscI TGGCCA 1 cut(s) 170
MseI TTAA 6 cut(s) 89, 809, 851, 1167, 1211, 1477
MslI CAYNNNNRTG 1 cut(s) 944
Msp20I TGGCCA 1 cut(s) 170
MspA1I CMGCKG 1 cut(s) 995
MspI CCGG 9 cut(s) 132, 183, 187, 308, 505, 518, 1018, 1047, 1185
MspR9I CCNGG 5 cut(s) 183, 188, 518, 648, 739
MunI CAATTG 2 cut(s) 1103, 1419
MvaI CCWGG 2 cut(s) 648, 739
MvnI CGCG 1 cut(s) 363
MwoI GCNNNNNNNGC 2 cut(s) 70, 445
NciI CCSGG 3 cut(s) 183, 188, 518
NcoI CCATGG 1 cut(s) 945
NdeII GATC 7 cut(s) 421, 433, 513, 812, 1219, 1297, 1433
NlaIII CATG 8 cut(s) 127, 208, 376, 400, 695, 949, 1378, 1415
NlaIV GGNNCC 6 cut(s) 65, 191, 300, 444, 515, 744
NmeAIII GCCGAG 2 cut(s) 261, 477
NmuCI GTSAC 5 cut(s) 265, 467, 1097, 1306, 1466
NsiI ATGCAT 1 cut(s) 693
NspV TTCGAA 1 cut(s) 387
PagI TCATGA 1 cut(s) 396
PciSI GCTCTTC 1 cut(s) 1378
PcsI WCGNNNNNNNCGW 1 cut(s) 533
PfeI GAWTC 2 cut(s) 128, 911
PflFI GACNNNGTC 1 cut(s) 632
PflMI CCANNNNNTGG 1 cut(s) 166
PinAI ACCGGT 1 cut(s) 1046
PkrI GCNGC 6 cut(s) 137, 367, 447, 450, 523, 994
Ppu21I YACGTR 1 cut(s) 163
PshBI ATTAAT 1 cut(s) 851
Psp1406I AACGTT 3 cut(s) 246, 315, 339
Psp6I CCWGG 2 cut(s) 646, 737
PspGI CCWGG 2 cut(s) 646, 737
PspN4I GGNNCC 6 cut(s) 65, 191, 300, 444, 515, 744
PspPI GGNCC 4 cut(s) 63, 190, 358, 845
PsuI RGATCY 1 cut(s) 513
PsyI GACNNNGTC 1 cut(s) 632
PvuII CAGCTG 1 cut(s) 995
RsaI GTAC 3 cut(s) 744, 938, 1282
RsaNI GTAC 3 cut(s) 743, 937, 1281
RseI CAYNNNNRTG 1 cut(s) 944
SapI GCTCTTC 1 cut(s) 1378
SaqAI TTAA 6 cut(s) 89, 809, 851, 1167, 1211, 1477
SatI GCNGC 6 cut(s) 136, 366, 446, 449, 522, 993
Sau3AI GATC 7 cut(s) 421, 433, 513, 812, 1219, 1297, 1433
Sau96I GGNCC 4 cut(s) 63, 190, 358, 845
ScaI AGTACT 1 cut(s) 1282
ScrFI CCNGG 5 cut(s) 183, 188, 518, 648, 739
SduI GDGCHC 1 cut(s) 976
SfaNI GCATC 1 cut(s) 678
SfuI TTCGAA 1 cut(s) 387
SinI GGWCC 1 cut(s) 358
SmiMI CAYNNNNRTG 1 cut(s) 944
Sse9I AATT 7 cut(s) 115, 818, 831, 1103, 1320, 1340, 1419
SsiI CCGC 8 cut(s) 10, 136, 361, 446, 449, 521, 1011, 1182
SspMI CTAG 3 cut(s) 227, 908, 969
StyD4I CCNGG 5 cut(s) 181, 186, 516, 646, 737
StyI CCWWGG 2 cut(s) 482, 945
TaaI ACNGT 3 cut(s) 154, 632, 841
TaiI ACGT 7 cut(s) 78, 165, 198, 249, 318, 342, 807
TaqI TCGA 2 cut(s) 387, 636
TaqII GACCGA 2 cut(s) 27, 919
TasI AATT 7 cut(s) 115, 818, 831, 1103, 1320, 1340, 1419
TatI WGTACW 2 cut(s) 936, 1280
TauI GCSGC 4 cut(s) 138, 448, 451, 524
TfiI GAWTC 2 cut(s) 128, 911
Tru1I TTAA 6 cut(s) 89, 809, 851, 1167, 1211, 1477
Tru9I TTAA 6 cut(s) 89, 809, 851, 1167, 1211, 1477
TseFI GTSAC 5 cut(s) 265, 467, 1097, 1306, 1466
TseI GCWGC 2 cut(s) 365, 992
Tsp45I GTSAC 5 cut(s) 265, 467, 1097, 1306, 1466
TspDTI ATGAA 6 cut(s) 96, 224, 277, 563, 1244, 1450
TspGWI ACGGA 3 cut(s) 405, 538, 704
Tth111I GACNNNGTC 1 cut(s) 632
Van91I CCANNNNNTGG 1 cut(s) 166
VpaK11BI GGWCC 1 cut(s) 358
VspI ATTAAT 1 cut(s) 851
XapI RAATTY 2 cut(s) 818, 1340
XmiI GTMKAC 1 cut(s) 51
XspI CTAG 3 cut(s) 227, 908, 969
ZrmI AGTACT 1 cut(s) 1282
Zsp2I ATGCAT 1 cut(s) 693
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.