MD11G1062700.v1.1

UDP-glycosyltransferase 87A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000228
Physical Location & Seq
Reverse (-)
5439330 .. 5441342
2013 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1062700.v1.1.491

Sequence Viewer

Length: 1416 bp
ATGGACTTCCTAAATTCCTCTCAAACCATTACACACCATGTGGTCGCGCTGCCGATACCCAGCCGCGGCCACATCAACCCAATGATGTGCCTCTGCAACTCCATCGCTTCCCTCAACGCCGCCGATGGCAACATCAACCTCCTTGTAACCTTAATAGTCACCGAGGAGTGGCTTGGATTCATAGGGTCGGATCCGAAACCCGACAACGTAGTCTTCGCCACCATTCCCAACGTCATCCCCTCCGAGATCGGCCGAGGCGCCGACTCACCCAGTTTCTACGAAACTGTCTTGAGAAAAATAAGAGCCCCGGTCGAAGACCTCCTCGACCGGCTCGAGCCGCCTGTTACTGCCTTGATTGCGGACACACACATTGTGTGGTCGATTGAGATAGGGAACCTGAGGAATATTCCGGTGGGTTCTCTTTGGACCATGTCCGCTTCAGTCTACTCCGTCTTTCATTTCTTCGATCTCCTCGTCCAGCATCGACATTTCCCGGTAAATTTGGCAGAAAGAGAAAAAGAGCACGTAGACTACATCCCTGGACTTCCTTCTACACGTGTGGCAGACCTTCCCACGTGTTTCTATGGCAAAGGGATTAACATCTTGGATCGAATACTAGAAGCAATTTCAAGTCTGCCCAAAGCACGTTGGCTTCTGCTGCCTTCGGTGTACGAGCTTGAAGCCCAAGTTATCGACGCTTTGAGAGAGAAACTTTCGATTCCTGTTTACCACATTGGGCCCTTAATACCTCATTTCAAGGTGAAGGCCCAAATAAGGCCCATTGAGGCCCAACCTAAGCCCAACGAGTCCCAATATTTTGATTGGTTAGATAAGCAACCAAGAGGGTCGGTTTTGTACATATCGCAAGGGAGTTTGCATTCAGCTTCCAAAGCCCAAATGGAGGAAATCGCACGTGGCTTGAGAGAGAGTGGGGTCCGATTCTTTTGGGCGGCACGTGCTGAAGCTTTGGAGTTGCAAGAGAAGTGTGGTGAGATGGGGATTGTGGTGCCTTGGTGTGACCAATTGAGAGTGTTGTGTCACTCTTGTATTGGAGGGTTTTGGTCTCATTGTGGTTGGAATTCGACCTCGGAAGCTGTTTTTGCCGGCCTTCCGATGTTGACCTTTCCTATTTATTGGGACCAAGTGCCCAATAGTAAGATGATTGTGGAGGATTGGAAGATAGGGTGGAAGGTGAAGAAGGGTATGGGAGAAGAAGAAATTTTGGTGACTAGAGAGGAAATTAAAGGAATTGTTAAAAGGTTTATGGATTTGGAAAGTGAGGAAGGGAAAGACATTAGGAGGCAAGCAAGAGAGATTCGGGATATTTGTCGGCAAGCAGTTCGAAAGGGTGGCTCGTCTTATTCCAATATTGAAGCATTTATAAGTGACCTATCAAGCTATGAGAAGCATTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

472

Amino Acids

53.11

Weight (kDa)

5.91

Isoelectric Point (pI)

49.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 247 - 407 1.7e-16 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1382
AasI GACNNNNNNGTC 1 cut(s) 209
AccB1I GGYRCC 2 cut(s) 257, 1006
AccI GTMKAC 2 cut(s) 444, 528
AccII CGCG 2 cut(s) 47, 66
AciI CCGC 7 cut(s) 64, 66, 120, 338, 359, 435, 950
AclWI GGATC 3 cut(s) 185, 198, 615
AcoI YGGCCR 2 cut(s) 67, 250
AcsI RAATTY 4 cut(s) 13, 499, 1078, 1218
AcuI CTGAAG 2 cut(s) 423, 981
AcvI CACGTG 4 cut(s) 557, 576, 914, 956
AcyI GRCGYC 1 cut(s) 258
AdeI CACNNNGTG 2 cut(s) 40, 373
AfaI GTAC 2 cut(s) 671, 857
AfiI CCNNNNNNNGG 4 cut(s) 65, 168, 774, 901
AflIII ACRYGT 3 cut(s) 554, 556, 575
AgsI TTSAA 4 cut(s) 630, 680, 757, 1373
AjnI CCWGG 1 cut(s) 538
AluBI AGCT 5 cut(s) 676, 884, 965, 1094, 1398
AluI AGCT 5 cut(s) 676, 884, 965, 1094, 1398
Alw21I GWGCWC 1 cut(s) 525
Alw26I GTCTC 1 cut(s) 1068
AlwI GGATC 3 cut(s) 185, 198, 615
Ama87I CYCGRG 1 cut(s) 332
AoxI GGCC 7 cut(s) 67, 250, 737, 765, 776, 786, 1105
ApaI GGGCCC 1 cut(s) 741
ApeKI GCWGC 2 cut(s) 49, 658
ApoI RAATTY 4 cut(s) 13, 499, 1078, 1218
AspLEI GCGC 2 cut(s) 49, 260
AspS9I GGNCC 8 cut(s) 426, 737, 738, 766, 777, 787, 934, 1138
AsuC2I CCSGG 2 cut(s) 308, 494
AsuHPI GGTGA 6 cut(s) 151, 258, 772, 1001, 1204, 1237
AsuII TTCGAA 1 cut(s) 1342
AvaI CYCGRG 1 cut(s) 332
AvaII GGWCC 3 cut(s) 426, 934, 1138
AxyI CCTNAGG 1 cut(s) 398
BaeGI GKGCMC 2 cut(s) 741, 1149
BamHI GGATCC 1 cut(s) 190
BanI GGYRCC 2 cut(s) 257, 1006
BanII GRGCYC 2 cut(s) 307, 741
BbrPI CACGTG 4 cut(s) 557, 576, 914, 956
BbsI GAAGAC 2 cut(s) 205, 321
Bbv12I GWGCWC 1 cut(s) 525
BbvI GCAGC 2 cut(s) 36, 645
BccI CCATC 3 cut(s) 110, 119, 988
BcgI CGANNNNNNTGC 4 cut(s) 85, 119, 1322, 1356
BciT130I CCWGG 1 cut(s) 540
BcnI CCSGG 2 cut(s) 308, 494
BcoDI GTCTC 1 cut(s) 1068
BfaI CTAG 2 cut(s) 617, 1230
BfoI RGCGCY 1 cut(s) 261
BisI GCNGC 7 cut(s) 50, 64, 67, 120, 338, 659, 951
BlsI GCNGC 7 cut(s) 51, 65, 68, 121, 339, 660, 952
Bme1390I CCNGG 3 cut(s) 308, 494, 540
Bme18I GGWCC 3 cut(s) 426, 934, 1138
BmeT110I CYCGRG 1 cut(s) 332
BmgT120I GGNCC 8 cut(s) 426, 737, 738, 766, 777, 787, 934, 1138
BmiI GGNNCC 7 cut(s) 192, 259, 395, 739, 935, 1008, 1139
BmrFI CCNGG 3 cut(s) 308, 494, 540
BmrI ACTGGG 1 cut(s) 264
BmsI GCATC 1 cut(s) 490
BmuI ACTGGG 1 cut(s) 264
BpiI GAAGAC 2 cut(s) 205, 321
Bpu10I CCTNAGC 1 cut(s) 795
Bpu14I TTCGAA 1 cut(s) 1342
BpuEI CTTGAG 2 cut(s) 310, 940
BpuMI CCSGG 2 cut(s) 308, 494
BsaAI YACGTR 5 cut(s) 526, 557, 576, 914, 956
BsaBI GATNNNNATC 1 cut(s) 599
BsaHI GRCGYC 1 cut(s) 258
BsaI GGTCTC 1 cut(s) 1068
BsaJI CCNNGG 7 cut(s) 64, 162, 253, 306, 538, 1010, 1086
BsaWI WCCGGW 1 cut(s) 409
Bsc4I CCNNNNNNNGG 4 cut(s) 65, 168, 774, 901
Bse118I RCCGGY 2 cut(s) 327, 1103
Bse1I ACTGG 1 cut(s) 270
Bse21I CCTNAGG 1 cut(s) 398
Bse8I GATNNNNATC 1 cut(s) 599
BseBI CCWGG 1 cut(s) 540
BseDI CCNNGG 7 cut(s) 64, 162, 253, 306, 538, 1010, 1086
BseGI GGATG 2 cut(s) 234, 534
BseJI GATNNNNATC 1 cut(s) 599
BseLI CCNNNNNNNGG 4 cut(s) 65, 168, 774, 901
BseMII CTCAG 1 cut(s) 389
BseNI ACTGG 1 cut(s) 270
BseRI GAGGAG 3 cut(s) 179, 311, 461
BseSI GKGCMC 2 cut(s) 741, 1149
BseX3I CGGCCG 1 cut(s) 250
BseXI GCAGC 2 cut(s) 36, 645
BseYI CCCAGC 1 cut(s) 59
Bsh1236I CGCG 2 cut(s) 47, 66
Bsh1285I CGRYCG 3 cut(s) 253, 312, 328
BshFI GGCC 7 cut(s) 69, 252, 739, 767, 778, 788, 1107
BshNI GGYRCC 2 cut(s) 257, 1006
BsiEI CGRYCG 3 cut(s) 253, 312, 328
BsiHKAI GWGCWC 1 cut(s) 525
BsiHKCI CYCGRG 1 cut(s) 332
BsiSI CCGG 5 cut(s) 308, 328, 410, 494, 1104
BslFI GGGAC 2 cut(s) 793, 1151
BslI CCNNNNNNNGG 4 cut(s) 65, 168, 774, 901
BsmAI GTCTC 1 cut(s) 1068
BsmFI GGGAC 2 cut(s) 793, 1151
BsmI GAATGC 1 cut(s) 877
BsnI GGCC 7 cut(s) 69, 252, 739, 767, 778, 788, 1107
Bso31I GGTCTC 1 cut(s) 1068
BsoBI CYCGRG 1 cut(s) 332
Bsp119I TTCGAA 1 cut(s) 1342
Bsp120I GGGCCC 1 cut(s) 737
Bsp1286I GDGCHC 4 cut(s) 307, 525, 741, 1149
Bsp1407I TGTACA 1 cut(s) 855
Bsp143I GATC 4 cut(s) 190, 246, 466, 607
BspACI CCGC 7 cut(s) 64, 66, 120, 338, 359, 435, 950
BspANI GGCC 7 cut(s) 69, 252, 739, 767, 778, 788, 1107
BspCNI CTCAG 1 cut(s) 390
BspFNI CGCG 2 cut(s) 47, 66
BspLI GGNNCC 7 cut(s) 192, 259, 395, 739, 935, 1008, 1139
BspPI GGATC 3 cut(s) 185, 198, 615
BspT104I TTCGAA 1 cut(s) 1342
BspT107I GGYRCC 2 cut(s) 257, 1006
BspTNI GGTCTC 1 cut(s) 1068
BsrFI RCCGGY 2 cut(s) 327, 1103
BsrGI TGTACA 1 cut(s) 855
BsrI ACTGG 1 cut(s) 270
BssAI RCCGGY 2 cut(s) 327, 1103
BssECI CCNNGG 7 cut(s) 64, 162, 253, 306, 538, 1010, 1086
BssMI GATC 4 cut(s) 190, 246, 466, 607
BssNI GRCGYC 1 cut(s) 258
BssT1I CCWWGG 1 cut(s) 1010
Bst2UI CCWGG 1 cut(s) 540
Bst4CI ACNGT 1 cut(s) 286
BstACI GRCGYC 1 cut(s) 258
BstAUI TGTACA 1 cut(s) 855
BstBAI YACGTR 5 cut(s) 526, 557, 576, 914, 956
BstBI TTCGAA 1 cut(s) 1342
BstC8I GCNNGC 3 cut(s) 1105, 1305, 1335
BstDEI CTNAG 2 cut(s) 398, 795
BstDSI CCRYGG 1 cut(s) 64
BstF5I GGATG 2 cut(s) 234, 534
BstFNI CGCG 2 cut(s) 47, 66
BstH2I RGCGCY 1 cut(s) 261
BstHHI GCGC 2 cut(s) 49, 260
BstKTI GATC 4 cut(s) 193, 249, 469, 610
BstMAI GTCTC 1 cut(s) 1068
BstMBI GATC 4 cut(s) 190, 246, 466, 607
BstMCI CGRYCG 3 cut(s) 253, 312, 328
BstMWI GCNNNNNNNGC 6 cut(s) 337, 356, 658, 890, 956, 1100
BstNI CCWGG 1 cut(s) 540
BstSCI CCNGG 3 cut(s) 306, 492, 538
BstSLI GKGCMC 2 cut(s) 741, 1149
BstUI CGCG 2 cut(s) 47, 66
BstV1I GCAGC 2 cut(s) 36, 645
BstV2I GAAGAC 2 cut(s) 205, 321
BstX2I RGATCY 1 cut(s) 190
BstYI RGATCY 1 cut(s) 190
BstZI CGGCCG 1 cut(s) 250
Bsu36I CCTNAGG 1 cut(s) 398
BsuRI GGCC 7 cut(s) 69, 252, 739, 767, 778, 788, 1107
BtgI CCRYGG 1 cut(s) 64
BtgZI GCGATG 1 cut(s) 88
BtsCI GGATG 2 cut(s) 234, 534
Cac8I GCNNGC 3 cut(s) 1105, 1305, 1335
CfoI GCGC 2 cut(s) 49, 260
Cfr10I RCCGGY 2 cut(s) 327, 1103
Cfr13I GGNCC 8 cut(s) 426, 737, 738, 766, 777, 787, 934, 1138
Cfr42I CCGCGG 1 cut(s) 67
CseI GACGC 1 cut(s) 704
Csp6I GTAC 2 cut(s) 670, 856
CviAII CATG 2 cut(s) 38, 430
CviQI GTAC 2 cut(s) 670, 856
DdeI CTNAG 2 cut(s) 398, 795
DinI GGCGCC 1 cut(s) 259
DpnI GATC 4 cut(s) 192, 248, 468, 609
DpnII GATC 4 cut(s) 190, 246, 466, 607
DraIII CACNNNGTG 2 cut(s) 40, 373
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
EaeI YGGCCR 2 cut(s) 67, 250
EagI CGGCCG 1 cut(s) 250
EclXI CGGCCG 1 cut(s) 250
Eco130I CCWWGG 1 cut(s) 1010
Eco24I GRGCYC 2 cut(s) 307, 741
Eco31I GGTCTC 1 cut(s) 1068
Eco47I GGWCC 3 cut(s) 426, 934, 1138
Eco52I CGGCCG 1 cut(s) 250
Eco57I CTGAAG 2 cut(s) 423, 981
Eco72I CACGTG 4 cut(s) 557, 576, 914, 956
Eco81I CCTNAGG 1 cut(s) 398
Eco88I CYCGRG 1 cut(s) 332
EcoO109I RGGNCCY 1 cut(s) 738
EcoRI GAATTC 1 cut(s) 1078
EcoRII CCWGG 1 cut(s) 538
EcoT14I CCWWGG 1 cut(s) 1010
EcoT38I GRGCYC 2 cut(s) 307, 741
EgeI GGCGCC 1 cut(s) 259
EheI GGCGCC 1 cut(s) 259
ErhI CCWWGG 1 cut(s) 1010
FaeI CATG 2 cut(s) 41, 433
FaiI YATR 9 cut(s) 39, 182, 431, 585, 860, 1205, 1265, 1382, 1401
FaqI GGGAC 2 cut(s) 793, 1151
FatI CATG 2 cut(s) 37, 429
FblI GTMKAC 2 cut(s) 444, 528
Fnu4HI GCNGC 7 cut(s) 50, 64, 67, 120, 338, 659, 951
FokI GGATG 2 cut(s) 221, 521
FriOI GRGCYC 2 cut(s) 307, 741
Fsp4HI GCNGC 7 cut(s) 50, 64, 67, 120, 338, 659, 951
FspBI CTAG 2 cut(s) 617, 1230
GlaI GCGC 2 cut(s) 48, 259
GluI GCNGC 7 cut(s) 50, 64, 67, 120, 338, 659, 951
GsaI CCCAGC 1 cut(s) 63
HaeII RGCGCY 1 cut(s) 261
HaeIII GGCC 7 cut(s) 69, 252, 739, 767, 778, 788, 1107
HapII CCGG 5 cut(s) 308, 328, 410, 494, 1104
HgaI GACGC 1 cut(s) 704
HhaI GCGC 2 cut(s) 49, 260
Hin1I GRCGYC 1 cut(s) 258
Hin1II CATG 2 cut(s) 41, 433
Hin6I GCGC 2 cut(s) 47, 258
HinP1I GCGC 2 cut(s) 47, 258
HincII GTYRAC 1 cut(s) 1119
HindII GTYRAC 1 cut(s) 1119
HindIII AAGCTT 1 cut(s) 963
HinfI GANTC 6 cut(s) 177, 263, 718, 806, 939, 1315
HpaII CCGG 5 cut(s) 308, 328, 410, 494, 1104
HphI GGTGA 6 cut(s) 151, 258, 772, 1001, 1204, 1237
Hpy166II GTNNAC 5 cut(s) 445, 529, 670, 727, 1119
Hpy188I TCNGA 6 cut(s) 190, 195, 244, 938, 1090, 1113
Hpy188III TCNNGA 2 cut(s) 289, 1319
Hpy8I GTNNAC 5 cut(s) 445, 529, 670, 727, 1119
Hpy99I CGWCG 1 cut(s) 698
HpyAV CCTTC 8 cut(s) 558, 578, 672, 757, 1118, 1183, 1192, 1277
HpyCH4III ACNGT 1 cut(s) 286
HpyCH4IV ACGT 8 cut(s) 207, 231, 525, 556, 575, 646, 913, 955
HpyCH4V TGCA 3 cut(s) 96, 877, 976
HpyF10VI GCNNNNNNNGC 6 cut(s) 337, 356, 658, 890, 956, 1100
HpyF3I CTNAG 2 cut(s) 398, 795
HpySE526I ACGT 8 cut(s) 207, 231, 525, 556, 575, 646, 913, 955
Hsp92I GRCGYC 1 cut(s) 258
Hsp92II CATG 2 cut(s) 41, 433
HspAI GCGC 2 cut(s) 47, 258
KasI GGCGCC 1 cut(s) 257
KroI GCCGGC 1 cut(s) 1103
KroNI GCCGGC 1 cut(s) 1105
KspI CCGCGG 1 cut(s) 67
Kzo9I GATC 4 cut(s) 190, 246, 466, 607
Lsp1109I GCAGC 2 cut(s) 36, 645
LweI GCATC 1 cut(s) 490
MaeI CTAG 2 cut(s) 617, 1230
MaeII ACGT 8 cut(s) 207, 231, 525, 556, 575, 646, 913, 955
MaeIII GTNAC 7 cut(s) 145, 157, 343, 1016, 1037, 1225, 1385
MalI GATC 4 cut(s) 192, 248, 468, 609
MboI GATC 4 cut(s) 190, 246, 466, 607
MboII GAAGA 7 cut(s) 205, 326, 454, 1189, 1207, 1223, 1226
MfeI CAATTG 1 cut(s) 1022
MflI RGATCY 1 cut(s) 190
MhlI GDGCHC 4 cut(s) 307, 525, 741, 1149
MluCI AATT 8 cut(s) 13, 499, 624, 1022, 1078, 1218, 1239, 1248
Mly113I GGCGCC 1 cut(s) 258
MlyI GAGTC 2 cut(s) 257, 815
MmeI TCCRAC 2 cut(s) 168, 1055
MroNI GCCGGC 1 cut(s) 1103
MseI TTAA 6 cut(s) 152, 597, 743, 1242, 1254, 1414
MspA1I CMGCKG 1 cut(s) 66
MspI CCGG 5 cut(s) 308, 328, 410, 494, 1104
MspR9I CCNGG 3 cut(s) 308, 494, 540
MunI CAATTG 1 cut(s) 1022
Mva1269I GAATGC 1 cut(s) 877
MvaI CCWGG 1 cut(s) 540
MvnI CGCG 2 cut(s) 47, 66
MwoI GCNNNNNNNGC 6 cut(s) 337, 356, 658, 890, 956, 1100
NaeI GCCGGC 1 cut(s) 1105
NarI GGCGCC 1 cut(s) 258
NciI CCSGG 2 cut(s) 308, 494
NdeII GATC 4 cut(s) 190, 246, 466, 607
NgoMIV GCCGGC 1 cut(s) 1103
NlaIII CATG 2 cut(s) 41, 433
NlaIV GGNNCC 7 cut(s) 192, 259, 395, 739, 935, 1008, 1139
NmeAIII GCCGAG 1 cut(s) 278
NmuCI GTSAC 5 cut(s) 157, 1016, 1037, 1225, 1385
NspV TTCGAA 1 cut(s) 1342
PaeR7I CTCGAG 1 cut(s) 332
PcsI WCGNNNNNNNCGW 2 cut(s) 330, 471
PctI GAATGC 1 cut(s) 877
PdiI GCCGGC 1 cut(s) 1105
PfeI GAWTC 4 cut(s) 177, 718, 939, 1315
PflFI GACNNNGTC 1 cut(s) 430
PkrI GCNGC 7 cut(s) 51, 65, 68, 121, 339, 660, 952
PleI GAGTC 2 cut(s) 257, 814
PluTI GGCGCC 1 cut(s) 261
PmaCI CACGTG 4 cut(s) 557, 576, 914, 956
PmlI CACGTG 4 cut(s) 557, 576, 914, 956
PpsI GAGTC 2 cut(s) 257, 814
Ppu21I YACGTR 5 cut(s) 526, 557, 576, 914, 956
PsiI TTATAA 1 cut(s) 1382
Psp6I CCWGG 1 cut(s) 538
PspCI CACGTG 4 cut(s) 557, 576, 914, 956
PspFI CCCAGC 1 cut(s) 59
PspGI CCWGG 1 cut(s) 538
PspN4I GGNNCC 7 cut(s) 192, 259, 395, 739, 935, 1008, 1139
PspOMI GGGCCC 1 cut(s) 737
PspPI GGNCC 8 cut(s) 426, 737, 738, 766, 777, 787, 934, 1138
PspXI VCTCGAGB 1 cut(s) 332
PsuI RGATCY 1 cut(s) 190
PsyI GACNNNGTC 1 cut(s) 430
RsaI GTAC 2 cut(s) 671, 857
RsaNI GTAC 2 cut(s) 670, 856
SacII CCGCGG 1 cut(s) 67
SaqAI TTAA 6 cut(s) 152, 597, 743, 1242, 1254, 1414
SatI GCNGC 7 cut(s) 50, 64, 67, 120, 338, 659, 951
Sau3AI GATC 4 cut(s) 190, 246, 466, 607
Sau96I GGNCC 8 cut(s) 426, 737, 738, 766, 777, 787, 934, 1138
SchI GAGTC 2 cut(s) 257, 815
ScrFI CCNGG 3 cut(s) 308, 494, 540
SduI GDGCHC 4 cut(s) 307, 525, 741, 1149
SfaNI GCATC 1 cut(s) 490
SfoI GGCGCC 1 cut(s) 259
Sfr274I CTCGAG 1 cut(s) 332
Sfr303I CCGCGG 1 cut(s) 67
SfuI TTCGAA 1 cut(s) 1342
SgrBI CCGCGG 1 cut(s) 67
SinI GGWCC 3 cut(s) 426, 934, 1138
SlaI CTCGAG 1 cut(s) 332
SmlI CTYRAG 3 cut(s) 289, 332, 919
SmoI CTYRAG 3 cut(s) 289, 332, 919
Sse9I AATT 8 cut(s) 13, 499, 624, 1022, 1078, 1218, 1239, 1248
SsiI CCGC 7 cut(s) 64, 66, 120, 338, 359, 435, 950
SspDI GGCGCC 1 cut(s) 257
SspI AATATT 3 cut(s) 406, 815, 1369
SspMI CTAG 2 cut(s) 617, 1230
StyD4I CCNGG 3 cut(s) 306, 492, 538
StyI CCWWGG 1 cut(s) 1010
TaaI ACNGT 1 cut(s) 286
TaiI ACGT 8 cut(s) 210, 234, 528, 559, 578, 649, 916, 958
TasI AATT 8 cut(s) 13, 499, 624, 1022, 1078, 1218, 1239, 1248
TatI WGTACW 1 cut(s) 855
TauI GCSGC 5 cut(s) 66, 69, 122, 340, 953
TfiI GAWTC 4 cut(s) 177, 718, 939, 1315
Tru1I TTAA 6 cut(s) 152, 597, 743, 1242, 1254, 1414
Tru9I TTAA 6 cut(s) 152, 597, 743, 1242, 1254, 1414
TseFI GTSAC 5 cut(s) 157, 1016, 1037, 1225, 1385
TseI GCWGC 2 cut(s) 49, 658
Tsp45I GTSAC 5 cut(s) 157, 1016, 1037, 1225, 1385
TspDTI ATGAA 2 cut(s) 169, 446
TspGWI ACGGA 1 cut(s) 439
Tth111I GACNNNGTC 1 cut(s) 430
VpaK11BI GGWCC 3 cut(s) 426, 934, 1138
XapI RAATTY 4 cut(s) 13, 499, 1078, 1218
XcmI CCANNNNNNNNNTGG 1 cut(s) 895
XhoI CTCGAG 1 cut(s) 332
XmiI GTMKAC 2 cut(s) 444, 528
XspI CTAG 2 cut(s) 617, 1230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.