pycom11g05220

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
4019356 .. 4019943
588 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g05220.1

Sequence Viewer

Length: 588 bp
ATGGGCATGGTGGCAGTTGAGCCAATCACAGTCTGCCATGTGGTGGCTTTGGCCTCTCCTGGAAGAGGCCACATCAACCCCATGATGAACCTTTGCAAGCTACTATCTTCAAAAAACCCTCAACTCCTCATCACCTTCGTCGTCACCGAAGAGTGGCACGGGCTGATCGAAATAGACCCAAAACCTGACAACATCCGATTAGCCACCATACCTAACGTCATACCCTCAGAGCACGGTCGTGCGAACCACTTTGCCGCGTTTGTGGAAGCTGTGTGGACCAAGATGGAAGCTCCGGTTGAGCAACTTATGGATGGGCTGGAGCAGCCGGTGACCGCCATAGTTGCTGATACCTTCCTTGTTTGGGCTTTGAGGATCGGGAACAGGAGGAATATTCCGGTGGCTTCGCTTTGGACTCAGTCGCCGACGATGTTATCATTGTTGCATCACTTTGAGCTGTTCAAAGAAAATGGCCACTTCCCTCTCGATGGCTCAGGTGCGTGTACACTTACCACGTTCATTATTGGAGTATTTTCTAAAGTTACTTTAGAATGTCTTATAATTCAAAATTTTCCGTTATTAAATATTTAA

Protein Analysis

196

Amino Acids

21.57

Weight (kDa)

5.86

Isoelectric Point (pI)

48.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000228)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30140 AT2G30140 AT2G30150 AT2G30150
fragaria_vesca FvH4_3g39560 FvH4_3g39570 FvH4_3g39580 FvH4_3g39590 FvH4_3g39591 FvH4_3g39620 FvH4_3g39630 FvH4_3g39630 FvH4_3g39631
malus_domestica MD03G1059700.v1.1 MD11G1061800.v1.1 MD11G1061900.v1.1 MD11G1062000.v1.1 MD11G1062100.v1.1 MD11G1062200.v1.1 MD11G1062300.v1.1 MD11G1062400.v1.1 MD11G1062500.v1.1 MD11G1062600.v1.1 MD11G1062700.v1.1 MD11G1062800.v1.1
prunus_persica Prupe.6G049300_v2.0.a1 Prupe.6G049400_v2.0.a1 Prupe.6G049600_v2.0.a1 Prupe.6G049700_v2.0.a1 Prupe.6G049900_v2.0.a1 Prupe.6G050000_v2.0.a1 Prupe.6G050100_v2.0.a1 Prupe.6G050200_v2.0.a1
pyrus_communis pycom03g04800 pycom11g05140 pycom11g05170 pycom11g05180 pycom11g05190 pycom11g05220 pycom11g05230 pycom11g05240 pycom11g05260 pycom11g05270
rosa_chinensis RchiOBHm_Chr5g0071331 RchiOBHm_Chr5g0071341 RchiOBHm_Chr5g0071371 RchiOBHm_Chr5g0071381 RchiOBHm_Chr5g0071431 RchiOBHm_Chr5g0071441 RchiOBHm_Chr5g0071451 RchiOBHm_Chr5g0071461 RchiOBHm_Chr5g0071471
rosa_laevigata RLG00000036203 RLG00000036204 RLG00000036207 RLG00000036208 RLG00000036209 RLG00000036210 RLG00000036213 RLG00000036214 RLG00000036215 RLG00000036217
rosa_multiflora Rmu_co8256977.1_g000001 Rmu_co8352537.1_g000001 Rmu_sc0001567.1_g000004 Rmu_sc0004697.1_g000003 Rmu_sc0006990.1_g000003 Rmu_sc0006990.1_g000004 Rmu_sc0009988.1_g000004 Rmu_sc0009988.1_g000005 Rmu_sc0009988.1_g000006 Rmu_sc0009988.1_g000008 Rmu_sc0009988.1_g000009 Rmu_sc0009988.1_g000014 Rmu_sc0009988.1_g000020 Rmu_sc0009988.1_g000021
rosa_roxburghii Rroxscaffold_1G00009650 Rroxscaffold_1G00009670 Rroxscaffold_1G00009680 Rroxscaffold_1G00009740 Rroxscaffold_1G00009760 Rroxscaffold_1G00009780 Rroxscaffold_1G00009800 Rroxscaffold_7G00203790
rosa_rugosa Rorug05G0411400 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411500 Rorug05G0411700 Rorug05G0411700 Rorug05G0411900 Rorug05G0412000 Rorug05G0412200 Rorug05G0412300 Rorug05G0412400 Rorug05G0412500
rosa_samantha Rh1AG118000 Rh1BG088900 Rh1CG112900 Rh5AG467800 Rh5AG467900 Rh5AG468100 Rh5AG468200 Rh5AG468300 Rh5AG468400 Rh5AG468500 Rh5AG468600 Rh5BG486300 Rh5BG486400 Rh5BG486600 Rh5BG486700 Rh5BG486800 Rh5BG487100 Rh5BG487200 Rh5BG487300 Rh5BG487400 Rh5BG487500 Rh5BG487700 Rh5CG510700 Rh5CG510800 Rh5CG511000 Rh5CG511100 Rh5CG511200 Rh5CG511400 Rh5CG511500 Rh5CG511600 Rh5CG511700 Rh5CG511900 Rh5DG497500 Rh5DG497600 Rh5DG497700 Rh5DG498000 Rh5DG498300 Rh5DG498400 Rh5DG498500 Rh5DG498600 Rh5DG498700
rosa_wichuraiana Rw5G043460 Rw5G043470 Rw5G043480 Rw5G043490 Rw5G043500 Rw5G043510 Rw5G043530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 557
AccB7I CCANNNNNTGG 1 cut(s) 43
AccII CGCG 1 cut(s) 257
AciI CCGC 2 cut(s) 255, 333
AclWI GGATC 1 cut(s) 380
AcoI YGGCCR 1 cut(s) 469
AcsI RAATTY 1 cut(s) 565
AfaI GTAC 1 cut(s) 502
AfiI CCNNNNNNNGG 5 cut(s) 43, 65, 153, 361, 485
AgsI TTSAA 3 cut(s) 111, 460, 563
AjnI CCWGG 1 cut(s) 58
AleI CACNNNNGTG 1 cut(s) 237
AluBI AGCT 4 cut(s) 100, 269, 290, 454
AluI AGCT 4 cut(s) 100, 269, 290, 454
Alw21I GWGCWC 1 cut(s) 234
AlwI GGATC 1 cut(s) 380
AoxI GGCC 3 cut(s) 51, 67, 469
ApeKI GCWGC 1 cut(s) 322
ApoI RAATTY 1 cut(s) 565
AspS9I GGNCC 1 cut(s) 276
AsuHPI GGTGA 3 cut(s) 124, 136, 340
AvaII GGWCC 1 cut(s) 276
BalI TGGCCA 1 cut(s) 471
Bbv12I GWGCWC 1 cut(s) 234
BbvI GCAGC 1 cut(s) 334
BccI CCATC 3 cut(s) 277, 305, 479
BciT130I CCWGG 1 cut(s) 60
BisI GCNGC 2 cut(s) 255, 323
BlsI GCNGC 2 cut(s) 256, 324
Bme1390I CCNGG 1 cut(s) 60
Bme18I GGWCC 1 cut(s) 276
BmgT120I GGNCC 1 cut(s) 276
BmrFI CCNGG 1 cut(s) 60
BmsI GCATC 1 cut(s) 451
BpmI CTGGAG 1 cut(s) 338
Bpu10I CCTNAGC 1 cut(s) 490
BsaWI WCCGGW 2 cut(s) 292, 394
Bsc4I CCNNNNNNNGG 5 cut(s) 43, 65, 153, 361, 485
Bse118I RCCGGY 1 cut(s) 325
BseBI CCWGG 1 cut(s) 60
BseGI GGATG 2 cut(s) 192, 316
BseLI CCNNNNNNNGG 5 cut(s) 43, 65, 153, 361, 485
BseMII CTCAG 3 cut(s) 240, 428, 504
BseRI GAGGAG 1 cut(s) 116
BseXI GCAGC 1 cut(s) 334
Bsh1236I CGCG 1 cut(s) 257
Bsh1285I CGRYCG 1 cut(s) 238
BshFI GGCC 3 cut(s) 53, 69, 471
BsiEI CGRYCG 1 cut(s) 238
BsiHKAI GWGCWC 1 cut(s) 234
BsiSI CCGG 3 cut(s) 293, 326, 395
BslI CCNNNNNNNGG 5 cut(s) 43, 65, 153, 361, 485
BsnI GGCC 3 cut(s) 53, 69, 471
Bsp1286I GDGCHC 1 cut(s) 234
Bsp1407I TGTACA 1 cut(s) 500
Bsp143I GATC 2 cut(s) 165, 372
BspACI CCGC 2 cut(s) 255, 333
BspANI GGCC 3 cut(s) 53, 69, 471
BspCNI CTCAG 3 cut(s) 239, 427, 503
BspFNI CGCG 1 cut(s) 257
BspPI GGATC 1 cut(s) 380
BsrFI RCCGGY 1 cut(s) 325
BsrGI TGTACA 1 cut(s) 500
BssAI RCCGGY 1 cut(s) 325
BssMI GATC 2 cut(s) 165, 372
Bst2UI CCWGG 1 cut(s) 60
Bst4CI ACNGT 2 cut(s) 31, 236
Bst6I CTCTTC 2 cut(s) 58, 144
BstAUI TGTACA 1 cut(s) 500
BstC8I GCNNGC 1 cut(s) 98
BstDEI CTNAG 3 cut(s) 226, 414, 490
BstEII GGTNACC 1 cut(s) 328
BstENI CCTNNNNNAGG 1 cut(s) 63
BstF5I GGATG 2 cut(s) 192, 316
BstFNI CGCG 1 cut(s) 257
BstKTI GATC 2 cut(s) 168, 375
BstMBI GATC 2 cut(s) 165, 372
BstMCI CGRYCG 1 cut(s) 238
BstMWI GCNNNNNNNGC 2 cut(s) 322, 341
BstNI CCWGG 1 cut(s) 60
BstPI GGTNACC 1 cut(s) 328
BstSCI CCNGG 1 cut(s) 58
BstUI CGCG 1 cut(s) 257
BstV1I GCAGC 1 cut(s) 334
BsuRI GGCC 3 cut(s) 53, 69, 471
BtsCI GGATG 2 cut(s) 192, 316
Cac8I GCNNGC 1 cut(s) 98
Cfr10I RCCGGY 1 cut(s) 325
Cfr13I GGNCC 1 cut(s) 276
Csp6I GTAC 1 cut(s) 501
CviAII CATG 3 cut(s) 7, 38, 82
CviQI GTAC 1 cut(s) 501
DdeI CTNAG 3 cut(s) 226, 414, 490
DpnI GATC 2 cut(s) 167, 374
DpnII GATC 2 cut(s) 165, 372
EaeI YGGCCR 1 cut(s) 469
Eam1104I CTCTTC 2 cut(s) 58, 144
EarI CTCTTC 2 cut(s) 58, 144
Eco47I GGWCC 1 cut(s) 276
Eco91I GGTNACC 1 cut(s) 328
EcoNI CCTNNNNNAGG 1 cut(s) 63
EcoO65I GGTNACC 1 cut(s) 328
EcoRII CCWGG 1 cut(s) 58
FaeI CATG 3 cut(s) 10, 41, 85
FaiI YATR 8 cut(s) 8, 39, 83, 209, 221, 308, 338, 557
FatI CATG 3 cut(s) 6, 37, 81
Fnu4HI GCNGC 2 cut(s) 255, 323
FokI GGATG 2 cut(s) 179, 323
Fsp4HI GCNGC 2 cut(s) 255, 323
GluI GCNGC 2 cut(s) 255, 323
GsuI CTGGAG 1 cut(s) 338
HaeIII GGCC 3 cut(s) 53, 69, 471
HapII CCGG 3 cut(s) 293, 326, 395
Hin1II CATG 3 cut(s) 10, 41, 85
HinfI GANTC 1 cut(s) 412
HpaII CCGG 3 cut(s) 293, 326, 395
HphI GGTGA 3 cut(s) 124, 136, 340
Hpy166II GTNNAC 3 cut(s) 276, 501, 503
Hpy188I TCNGA 2 cut(s) 197, 229
Hpy188III TCNNGA 2 cut(s) 376, 482
Hpy8I GTNNAC 3 cut(s) 276, 501, 503
Hpy99I CGWCG 2 cut(s) 143, 427
HpyAV CCTTC 2 cut(s) 145, 361
HpyCH4III ACNGT 2 cut(s) 31, 236
HpyCH4IV ACGT 2 cut(s) 216, 512
HpyCH4V TGCA 2 cut(s) 96, 442
HpyF10VI GCNNNNNNNGC 2 cut(s) 322, 341
HpyF3I CTNAG 3 cut(s) 226, 414, 490
HpySE526I ACGT 2 cut(s) 216, 512
Hsp92II CATG 3 cut(s) 10, 41, 85
Kzo9I GATC 2 cut(s) 165, 372
LmnI GCTCC 2 cut(s) 295, 319
LpnPI CCDG 9 cut(s) 45, 72, 198, 302, 306, 339, 367, 408, 477
Lsp1109I GCAGC 1 cut(s) 334
LweI GCATC 1 cut(s) 451
MaeII ACGT 2 cut(s) 216, 512
MaeIII GTNAC 3 cut(s) 142, 328, 538
MalI GATC 2 cut(s) 167, 374
MboI GATC 2 cut(s) 165, 372
MboII GAAGA 3 cut(s) 75, 99, 161
MhlI GDGCHC 1 cut(s) 234
MlsI TGGCCA 1 cut(s) 471
MluCI AATT 2 cut(s) 558, 565
MluNI TGGCCA 1 cut(s) 471
MlyI GAGTC 1 cut(s) 406
MnlI CCTC 8 cut(s) 59, 64, 129, 137, 235, 363, 378, 489
Mox20I TGGCCA 1 cut(s) 471
MscI TGGCCA 1 cut(s) 471
MseI TTAA 2 cut(s) 578, 586
MslI CAYNNNNRTG 1 cut(s) 237
Msp20I TGGCCA 1 cut(s) 471
MspI CCGG 3 cut(s) 293, 326, 395
MspR9I CCNGG 1 cut(s) 60
MvaI CCWGG 1 cut(s) 60
MvnI CGCG 1 cut(s) 257
MwoI GCNNNNNNNGC 2 cut(s) 322, 341
NdeII GATC 2 cut(s) 165, 372
NlaIII CATG 3 cut(s) 10, 41, 85
NmuCI GTSAC 2 cut(s) 142, 328
OliI CACNNNNGTG 1 cut(s) 237
PcsI WCGNNNNNNNCGW 2 cut(s) 144, 165
PflFI GACNNNGTC 1 cut(s) 415
PflMI CCANNNNNTGG 1 cut(s) 43
PfoI TCCNGGA 1 cut(s) 58
PkrI GCNGC 2 cut(s) 256, 324
PleI GAGTC 1 cut(s) 406
PpsI GAGTC 1 cut(s) 406
PsiI TTATAA 1 cut(s) 557
Psp6I CCWGG 1 cut(s) 58
PspEI GGTNACC 1 cut(s) 328
PspGI CCWGG 1 cut(s) 58
PspPI GGNCC 1 cut(s) 276
PsyI GACNNNGTC 1 cut(s) 415
RsaI GTAC 1 cut(s) 502
RsaNI GTAC 1 cut(s) 501
RseI CAYNNNNRTG 1 cut(s) 237
SaqAI TTAA 2 cut(s) 578, 586
SatI GCNGC 2 cut(s) 255, 323
Sau3AI GATC 2 cut(s) 165, 372
Sau96I GGNCC 1 cut(s) 276
SchI GAGTC 1 cut(s) 406
ScrFI CCNGG 1 cut(s) 60
SduI GDGCHC 1 cut(s) 234
SfaNI GCATC 1 cut(s) 451
SinI GGWCC 1 cut(s) 276
SmiMI CAYNNNNRTG 1 cut(s) 237
Sse9I AATT 2 cut(s) 558, 565
SsiI CCGC 2 cut(s) 255, 333
SspI AATATT 2 cut(s) 391, 583
StyD4I CCNGG 1 cut(s) 58
TaaI ACNGT 2 cut(s) 31, 236
TaiI ACGT 2 cut(s) 219, 515
TaqI TCGA 2 cut(s) 168, 483
TasI AATT 2 cut(s) 558, 565
TatI WGTACW 1 cut(s) 500
TauI GCSGC 1 cut(s) 257
Tru1I TTAA 2 cut(s) 578, 586
Tru9I TTAA 2 cut(s) 578, 586
TseFI GTSAC 2 cut(s) 142, 328
TseI GCWGC 1 cut(s) 322
Tsp45I GTSAC 2 cut(s) 142, 328
TspDTI ATGAA 2 cut(s) 101, 505
TspGWI ACGGA 1 cut(s) 561
Tth111I GACNNNGTC 1 cut(s) 415
Van91I CCANNNNNTGG 1 cut(s) 43
VpaK11BI GGWCC 1 cut(s) 276
XagI CCTNNNNNAGG 1 cut(s) 63
XapI RAATTY 1 cut(s) 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.