Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0000377

Physical Location & Seq

Genomic Coordinates Reverse (-)

11030265 .. 11033222

Gene Structure 2958 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1080300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGGCATCCGATTCCCATTCCAGCTATTTGTACTCACCGTGGTCTCAATCCGATCAAACTTTGCTGACCTTCATCTCCGCCACTTTCCTCGTCTTTCTGTACCTCTGGCTGGTCAAAAAATCCAACAACCCGATCCCGCCTCTGCCACCGGGTCCGCAGGCCCTGCCCTTGGTTGGGAACCTCCTCTCCCTCGACCCAGAACTCCACTCCTACTTCGCGGGCCTGGCCCAATCGCACGGCCCAATCTTCAAACTCCGCCTCGGCAACACCGTCGGCGTCGTGGTTACCTCCCCTTCCTCCGCTCGCGAGATTCTCAAGGACCATGACGCCACCTGCGCCAACCGCGACGTCCCCGCCGCGGCTCGGGCCGCGACGTACGGGGGAATCGACATCGTGTGGACTCCGTACGGACCGGAGTGGCGGATGTTGAGGAAAGTCTGCGTGCTGAAAATGCTCAGCAACACCACTGTCGACTCGGTGTATGCGCTCCGGCGGAAAGAGCTCCGACAGACCGTCGGGAATTTCTACGATAGGATCGGGTCGCGGGTCAACGTGGGGGAGCAGATGTTCCTGAACGTGCTGAATGTTATTACGAACATGCTGTGGGGCGGAACCGTGGAGGGAGACGAGAGGGCGGGGCTCGGGGCGGAGTTTCGAGAAGTGGTGTCGGAGATGACGGAGCTTTTGGGGAAGCCGAATGTTTCGGACTTTTATCCGGGTTTGGCCCGGTTTGATTTGCAGGGGGTGGTGAAACAGATGAGCAGGTTGGTCCGGAGGTTTGATGGGATATTTGAGAAGATAATAGATCAACGGCTGAGGCTTGACAAGGAAGGAGAGAAGGAGGAGAACAATAAGGATTTTTTGACGTTTTTGTTGAAGTTGAAGGAGGAGGGAGGAGATTCCAAGGCGCCTTTCACCATGTCTCATCTCAAAGCTTTGCTTATGGATATGGTGGTGGGTGGGACTGACACTTCCTCCAACACAACTGAGTTTGCACTAGCTGAAATCATGAACAAGCCAGAGATGATGGAAAAAGCCCAGAAAGAGTTAGAAGATGTAGTTGGCAGACACAACATTGTAGAAGAGTCCCACATCGACAAATTGCCATACTTACAAGCTGTGATGAAAGAAACTTTGCGCTTGCATCCAGCCCTGCCTCTGTTAGTCCCTCATTGCCCAAGTGAAAATTGCATTGTGGGAGGCTACACCATTCCCAAAGGATCTCGGATTTTTGTCAACGTTTGGGCTATACACAGAGACCCTTCAATTTGGGAAAACCCGTTGGAGTTCAAGCCGGAGAGGTTCTTGGATAGCAGATGGGACTACAGTGGGAAAAACTTCAACTATTTTCCATTTGGGTCAGGTAGAAGAATATGTGCTGGGATTGCAATGGCTGAGAGGATGGTGATGCATTCACTTGCTACACTTTTGCATTCTTTTGACTGGAAATTGCCAGAGGGAGAGAAGTTGGATCTTTCTGAGAAGTTTGGGATTGTGTTGAAGAAGAAGATTCCTTTGGTTGCCATCCCAACTCCAAGGTTATCAGATCTAGCACTCTATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0016020 GO:0019748 GO:0042221 GO:0044550 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934

Pfam Domains

Protein Families

p450

Protein Analysis

522

Amino Acids

58.62

Weight (kDa)

6.49

Isoelectric Point (pI)

41.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	49 - 503	5.7e-105	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca	FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica	MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica	Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis	pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis	RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata	RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora	Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii	Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa	Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha	Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana	Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	341
AatII	GACGTC	1 cut(s)	351
Acc36I	ACCTGC	2 cut(s)	341, 753
AccB1I	GGYRCC	1 cut(s)	907
AccBSI	CCGCTC	1 cut(s)	302
AccI	GTMKAC	1 cut(s)	471
AccII	CGCG	6 cut(s)	218, 306, 345, 359, 371, 544
AccIII	TCCGGA	1 cut(s)	771
AclI	AACGTT	1 cut(s)	1239
AclWI	GGATC	4 cut(s)	127, 542, 1228, 1479
AcsI	RAATTY	1 cut(s)	520
AcyI	GRCGYC	4 cut(s)	276, 327, 348, 908
AfaI	GTAC	4 cut(s)	32, 101, 377, 407
AfiI	CCNNNNNNNGG	6 cut(s)	109, 169, 173, 174, 358, 363
AgsI	TTSAA	7 cut(s)	250, 877, 883, 1266, 1291, 1342, 1501
AhdI	GACNNNNNGTC	1 cut(s)	512
AjnI	CCWGG	1 cut(s)	222
AjuI	GAANNNNNNNTTGG	6 cut(s)	896, 928, 1044, 1076, 1499, 1531
AloI	GAACNNNNNNTCC	4 cut(s)	170, 202, 551, 583
AluBI	AGCT	6 cut(s)	24, 502, 682, 935, 1001, 1118
AluI	AGCT	6 cut(s)	24, 502, 682, 935, 1001, 1118
Alw21I	GWGCWC	1 cut(s)	504
Alw26I	GTCTC	4 cut(s)	48, 618, 927, 1251
AlwI	GGATC	4 cut(s)	127, 542, 1228, 1479
AlwNI	CAGNNNCTG	1 cut(s)	163
Ama87I	CYCGRG	2 cut(s)	363, 641
Aor13HI	TCCGGA	1 cut(s)	771
AoxI	GGCC	6 cut(s)	159, 220, 225, 238, 366, 723
ApoI	RAATTY	1 cut(s)	520
ArsI	GACNNNNNNTTYG	2 cut(s)	667, 699
Asp700I	GAANNNNTTC	1 cut(s)	1337
AspLEI	GCGC	4 cut(s)	338, 487, 910, 1140
AsuC2I	CCSGG	3 cut(s)	150, 717, 727
AsuHPI	GGTGA	4 cut(s)	27, 760, 907, 1417
AvaI	CYCGRG	2 cut(s)	363, 641
AvaII	GGWCC	4 cut(s)	152, 319, 410, 769
BanI	GGYRCC	1 cut(s)	907
BanII	GRGCYC	2 cut(s)	504, 642
Bbv12I	GWGCWC	1 cut(s)	504
BbvCI	CCTCAGC	1 cut(s)	815
BccI	CCATC	5 cut(s)	776, 1021, 1311, 1396, 1532
BceAI	ACGGC	2 cut(s)	253, 827
BcgI	CGANNNNNNTGC	2 cut(s)	253, 287
BciT130I	CCWGG	1 cut(s)	224
BcnI	CCSGG	3 cut(s)	150, 717, 727
BcoDI	GTCTC	4 cut(s)	48, 618, 927, 1251
BfaI	CTAG	2 cut(s)	998, 1550
BfmI	CTRYAG	1 cut(s)	1324
BfoI	RGCGCY	1 cut(s)	911
BfuAI	ACCTGC	2 cut(s)	341, 753
BglII	AGATCT	1 cut(s)	1546
BisI	GCNGC	3 cut(s)	357, 360, 369
BlpI	GCTNAGC	1 cut(s)	455
BlsI	GCNGC	3 cut(s)	358, 361, 370
Bme1390I	CCNGG	4 cut(s)	150, 224, 717, 727
Bme18I	GGWCC	4 cut(s)	152, 319, 410, 769
BmeRI	GACNNNNNGTC	1 cut(s)	512
BmeT110I	CYCGRG	2 cut(s)	363, 641
BmiI	GGNNCC	4 cut(s)	153, 179, 613, 909
BmrFI	CCNGG	4 cut(s)	150, 224, 717, 727
BmsI	GCATC	3 cut(s)	14, 1153, 1398
Bpu10I	CCTNAGC	1 cut(s)	815
Bpu1102I	GCTNAGC	1 cut(s)	455
BpuEI	CTTGAG	1 cut(s)	299
BpuMI	CCSGG	3 cut(s)	150, 717, 727
BsaHI	GRCGYC	4 cut(s)	276, 327, 348, 908
BsaI	GGTCTC	2 cut(s)	48, 1251
BsaJI	CCNNGG	7 cut(s)	38, 168, 259, 357, 615, 903, 1535
BsaWI	WCCGGW	2 cut(s)	412, 771
BsaXI	ACNNNNNCTCC	6 cut(s)	170, 200, 551, 581, 959, 989
Bsc4I	CCNNNNNNNGG	6 cut(s)	109, 169, 173, 174, 358, 363
Bse1I	ACTGG	1 cut(s)	1448
Bse3DI	GCAATG	2 cut(s)	1171, 1395
BseAI	TCCGGA	1 cut(s)	771
BseBI	CCWGG	1 cut(s)	224
BseDI	CCNNGG	7 cut(s)	38, 168, 259, 357, 615, 903, 1535
BseGI	GGATG	5 cut(s)	5, 429, 1144, 1407, 1524
BseLI	CCNNNNNNNGG	6 cut(s)	109, 169, 173, 174, 358, 363
BseMI	GCAATG	2 cut(s)	1171, 1395
BseMII	CTCAG	5 cut(s)	469, 806, 978, 1386, 1470
BseNI	ACTGG	1 cut(s)	1448
BseRI	GAGGAG	4 cut(s)	173, 857, 902, 909
BseYI	CCCAGC	1 cut(s)	1379
Bsh1236I	CGCG	6 cut(s)	218, 306, 345, 359, 371, 544
BshFI	GGCC	6 cut(s)	161, 222, 227, 240, 368, 725
BshNI	GGYRCC	1 cut(s)	907
BsiHKAI	GWGCWC	1 cut(s)	504
BsiHKCI	CYCGRG	2 cut(s)	363, 641
BsiSI	CCGG	7 cut(s)	149, 413, 490, 716, 727, 772, 1295
BsiWI	CGTACG	2 cut(s)	375, 405
BslFI	GGGAC	5 cut(s)	335, 976, 1072, 1151, 1334
BslI	CCNNNNNNNGG	6 cut(s)	109, 169, 173, 174, 358, 363
BsmAI	GTCTC	4 cut(s)	48, 618, 927, 1251
BsmBI	CGTCTC	1 cut(s)	618
BsmFI	GGGAC	5 cut(s)	335, 976, 1072, 1151, 1334
BsmI	GAATGC	2 cut(s)	1411, 1432
BsnI	GGCC	6 cut(s)	161, 222, 227, 240, 368, 725
Bso31I	GGTCTC	2 cut(s)	48, 1251
BsoBI	CYCGRG	2 cut(s)	363, 641
Bsp1286I	GDGCHC	2 cut(s)	504, 642
Bsp13I	TCCGGA	1 cut(s)	771
Bsp143I	GATC	7 cut(s)	52, 132, 534, 805, 1220, 1471, 1546
Bsp1720I	GCTNAGC	1 cut(s)	455
Bsp68I	TCGCGA	1 cut(s)	306
BspANI	GGCC	6 cut(s)	161, 222, 227, 240, 368, 725
BspCNI	CTCAG	5 cut(s)	468, 807, 979, 1387, 1471
BspEI	TCCGGA	1 cut(s)	771
BspFNI	CGCG	6 cut(s)	218, 306, 345, 359, 371, 544
BspHI	TCATGA	1 cut(s)	1008
BspLI	GGNNCC	4 cut(s)	153, 179, 613, 909
BspMI	ACCTGC	2 cut(s)	341, 753
BspPI	GGATC	4 cut(s)	127, 542, 1228, 1479
BspT107I	GGYRCC	1 cut(s)	907
BspTNI	GGTCTC	2 cut(s)	48, 1251
BsrBI	CCGCTC	1 cut(s)	302
BsrDI	GCAATG	2 cut(s)	1171, 1395
BsrI	ACTGG	1 cut(s)	1448
BssECI	CCNNGG	7 cut(s)	38, 168, 259, 357, 615, 903, 1535
BssMI	GATC	7 cut(s)	52, 132, 534, 805, 1220, 1471, 1546
BssNI	GRCGYC	4 cut(s)	276, 327, 348, 908
BssT1I	CCWWGG	3 cut(s)	168, 903, 1535
Bst2UI	CCWGG	1 cut(s)	224
Bst4CI	ACNGT	6 cut(s)	39, 271, 469, 514, 616, 1328
Bst6I	CTCTTC	1 cut(s)	1077
BstACI	GRCGYC	4 cut(s)	276, 327, 348, 908
BstAPI	GCANNNNNTGC	1 cut(s)	163
BstC8I	GCNNGC	5 cut(s)	159, 220, 304, 443, 1142
BstDEI	CTNAG	5 cut(s)	455, 815, 987, 1395, 1479
BstDSI	CCRYGG	3 cut(s)	38, 357, 615
BstEII	GGTNACC	1 cut(s)	283
BstF5I	GGATG	5 cut(s)	5, 429, 1144, 1407, 1524
BstFNI	CGCG	6 cut(s)	218, 306, 345, 359, 371, 544
BstH2I	RGCGCY	1 cut(s)	911
BstHHI	GCGC	4 cut(s)	338, 487, 910, 1140
BstKTI	GATC	7 cut(s)	55, 135, 537, 808, 1223, 1474, 1549
BstMAI	GTCTC	4 cut(s)	48, 618, 927, 1251
BstMBI	GATC	7 cut(s)	52, 132, 534, 805, 1220, 1471, 1546
BstMWI	GCNNNNNNNGC	9 cut(s)	163, 224, 335, 342, 365, 368, 451, 499, 1385
BstNI	CCWGG	1 cut(s)	224
BstNSI	RCATGY	1 cut(s)	601
BstPI	GGTNACC	1 cut(s)	283
BstSCI	CCNGG	4 cut(s)	148, 222, 715, 725
BstSFI	CTRYAG	1 cut(s)	1324
BstUI	CGCG	6 cut(s)	218, 306, 345, 359, 371, 544
BstX2I	RGATCY	3 cut(s)	1220, 1471, 1546
BstYI	RGATCY	3 cut(s)	1220, 1471, 1546
BsuRI	GGCC	6 cut(s)	161, 222, 227, 240, 368, 725
BtgI	CCRYGG	3 cut(s)	38, 357, 615
BtsCI	GGATG	5 cut(s)	5, 429, 1144, 1407, 1524
BtsIMutI	CAGTG	2 cut(s)	465, 1333
BtuMI	TCGCGA	1 cut(s)	306
BveI	ACCTGC	2 cut(s)	341, 753
Cac8I	GCNNGC	5 cut(s)	159, 220, 304, 443, 1142
CaiI	CAGNNNCTG	1 cut(s)	163
CciI	TCATGA	1 cut(s)	1008
CfoI	GCGC	4 cut(s)	338, 487, 910, 1140
Cfr42I	CCGCGG	1 cut(s)	360
CpoI	CGGWCCG	1 cut(s)	410
CseI	GACGC	2 cut(s)	265, 335
Csp6I	GTAC	4 cut(s)	31, 100, 376, 406
CspI	CGGWCCG	1 cut(s)	410
CviAII	CATG	4 cut(s)	323, 598, 919, 1009
CviQI	GTAC	4 cut(s)	31, 100, 376, 406
DdeI	CTNAG	5 cut(s)	455, 815, 987, 1395, 1479
DinI	GGCGCC	1 cut(s)	909
DpnI	GATC	7 cut(s)	54, 134, 536, 807, 1222, 1473, 1548
DpnII	GATC	7 cut(s)	52, 132, 534, 805, 1220, 1471, 1546
DriI	GACNNNNNGTC	1 cut(s)	512
Eam1104I	CTCTTC	1 cut(s)	1077
Eam1105I	GACNNNNNGTC	1 cut(s)	512
EarI	CTCTTC	1 cut(s)	1077
EciI	GGCGGA	6 cut(s)	67, 245, 436, 508, 624, 662
Ecl136II	GAGCTC	1 cut(s)	502
Eco130I	CCWWGG	3 cut(s)	168, 903, 1535
Eco24I	GRGCYC	2 cut(s)	504, 642
Eco31I	GGTCTC	2 cut(s)	48, 1251
Eco47I	GGWCC	4 cut(s)	152, 319, 410, 769
Eco53kI	GAGCTC	1 cut(s)	502
Eco88I	CYCGRG	2 cut(s)	363, 641
Eco91I	GGTNACC	1 cut(s)	283
EcoICRI	GAGCTC	1 cut(s)	502
EcoO109I	RGGNCCY	1 cut(s)	160
EcoO65I	GGTNACC	1 cut(s)	283
EcoRII	CCWGG	1 cut(s)	222
EcoT14I	CCWWGG	3 cut(s)	168, 903, 1535
EcoT22I	ATGCAT	1 cut(s)	1413
EcoT38I	GRGCYC	2 cut(s)	504, 642
EgeI	GGCGCC	1 cut(s)	909
EheI	GGCGCC	1 cut(s)	909
ErhI	CCWWGG	3 cut(s)	168, 903, 1535
Esp3I	CGTCTC	1 cut(s)	618
FaeI	CATG	4 cut(s)	326, 601, 922, 1012
FalI	AAGNNNNNCTT	2 cut(s)	924, 956
FaqI	GGGAC	5 cut(s)	335, 976, 1072, 1151, 1334
FatI	CATG	4 cut(s)	322, 597, 918, 1008
FauI	CCCGC	5 cut(s)	144, 211, 361, 537, 628
FblI	GTMKAC	1 cut(s)	471
Fnu4HI	GCNGC	3 cut(s)	357, 360, 369
FokI	GGATG	4 cut(s)	436, 1131, 1414, 1511
FriOI	GRGCYC	2 cut(s)	504, 642
Fsp4HI	GCNGC	3 cut(s)	357, 360, 369
FspBI	CTAG	2 cut(s)	998, 1550
GlaI	GCGC	4 cut(s)	337, 486, 909, 1139
GluI	GCNGC	3 cut(s)	357, 360, 369
GsaI	CCCAGC	1 cut(s)	1383
HaeII	RGCGCY	1 cut(s)	911
HaeIII	GGCC	6 cut(s)	161, 222, 227, 240, 368, 725
HapII	CCGG	7 cut(s)	149, 413, 490, 716, 727, 772, 1295
HgaI	GACGC	2 cut(s)	265, 335
HhaI	GCGC	4 cut(s)	338, 487, 910, 1140
Hin1I	GRCGYC	4 cut(s)	276, 327, 348, 908
Hin1II	CATG	4 cut(s)	326, 601, 922, 1012
Hin6I	GCGC	4 cut(s)	336, 485, 908, 1138
HinP1I	GCGC	4 cut(s)	336, 485, 908, 1138
HincII	GTYRAC	3 cut(s)	472, 550, 1237
HindII	GTYRAC	3 cut(s)	472, 550, 1237
HindIII	AAGCTT	1 cut(s)	933
HinfI	GANTC	8 cut(s)	11, 310, 384, 400, 473, 899, 1085, 1510
HpaII	CCGG	7 cut(s)	149, 413, 490, 716, 727, 772, 1295
HphI	GGTGA	4 cut(s)	27, 760, 907, 1417
Hpy166II	GTNNAC	4 cut(s)	399, 472, 550, 1237
Hpy188I	TCNGA	8 cut(s)	10, 52, 506, 670, 706, 1227, 1480, 1546
Hpy188III	TCNNGA	6 cut(s)	305, 517, 571, 656, 772, 1009
Hpy8I	GTNNAC	4 cut(s)	399, 472, 550, 1237
Hpy99I	CGWCG	5 cut(s)	275, 281, 350, 376, 518
HpyAV	CCTTC	6 cut(s)	79, 303, 824, 832, 877, 1272
HpyCH4III	ACNGT	6 cut(s)	39, 271, 469, 514, 616, 1328
HpyCH4IV	ACGT	6 cut(s)	348, 374, 552, 576, 866, 1239
HpyCH4V	TGCA	7 cut(s)	739, 995, 1144, 1191, 1388, 1411, 1432
HpyF10VI	GCNNNNNNNGC	9 cut(s)	163, 224, 335, 342, 365, 368, 451, 499, 1385
HpyF3I	CTNAG	5 cut(s)	455, 815, 987, 1395, 1479
HpySE526I	ACGT	6 cut(s)	348, 374, 552, 576, 866, 1239
Hsp92I	GRCGYC	4 cut(s)	276, 327, 348, 908
Hsp92II	CATG	4 cut(s)	326, 601, 922, 1012
HspAI	GCGC	4 cut(s)	336, 485, 908, 1138
KasI	GGCGCC	1 cut(s)	907
Kpn2I	TCCGGA	1 cut(s)	771
KspI	CCGCGG	1 cut(s)	360
Kzo9I	GATC	7 cut(s)	52, 132, 534, 805, 1220, 1471, 1546
LmnI	GCTCC	4 cut(s)	492, 507, 559, 679
LweI	GCATC	3 cut(s)	14, 1153, 1398
MaeI	CTAG	2 cut(s)	998, 1550
MaeII	ACGT	6 cut(s)	348, 374, 552, 576, 866, 1239
MaeIII	GTNAC	1 cut(s)	283
MalI	GATC	7 cut(s)	54, 134, 536, 807, 1222, 1473, 1548
MbiI	CCGCTC	1 cut(s)	302
MboI	GATC	7 cut(s)	52, 132, 534, 805, 1220, 1471, 1546
MboII	GAAGA	8 cut(s)	238, 808, 1064, 1094, 1380, 1513, 1516, 1519
MflI	RGATCY	3 cut(s)	1220, 1471, 1546
MhlI	GDGCHC	2 cut(s)	504, 642
MluCI	AATT	5 cut(s)	520, 1100, 1186, 1266, 1448
Mly113I	GGCGCC	1 cut(s)	908
MlyI	GAGTC	3 cut(s)	394, 467, 1094
MmeI	TCCRAC	6 cut(s)	147, 529, 648, 1002, 1263, 1449
Mph1103I	ATGCAT	1 cut(s)	1413
MroI	TCCGGA	1 cut(s)	771
MroXI	GAANNNNTTC	1 cut(s)	1337
MspA1I	CMGCKG	1 cut(s)	359
MspI	CCGG	7 cut(s)	149, 413, 490, 716, 727, 772, 1295
MspR9I	CCNGG	4 cut(s)	150, 224, 717, 727
Mva1269I	GAATGC	2 cut(s)	1411, 1432
MvaI	CCWGG	1 cut(s)	224
MvnI	CGCG	6 cut(s)	218, 306, 345, 359, 371, 544
MwoI	GCNNNNNNNGC	9 cut(s)	163, 224, 335, 342, 365, 368, 451, 499, 1385
NarI	GGCGCC	1 cut(s)	908
NciI	CCSGG	3 cut(s)	150, 717, 727
NdeII	GATC	7 cut(s)	52, 132, 534, 805, 1220, 1471, 1546
NlaIII	CATG	4 cut(s)	326, 601, 922, 1012
NlaIV	GGNNCC	4 cut(s)	153, 179, 613, 909
NmeAIII	GCCGAG	1 cut(s)	240
NruI	TCGCGA	1 cut(s)	306
NsiI	ATGCAT	1 cut(s)	1413
NspI	RCATGY	1 cut(s)	601
PagI	TCATGA	1 cut(s)	1008
PaqCI	CACCTGC	1 cut(s)	341
PcsI	WCGNNNNNNNCGW	2 cut(s)	267, 384
PctI	GAATGC	2 cut(s)	1411, 1432
PdmI	GAANNNNTTC	1 cut(s)	1337
PfeI	GAWTC	5 cut(s)	11, 310, 384, 899, 1510
Pfl23II	CGTACG	2 cut(s)	375, 405
PkrI	GCNGC	3 cut(s)	358, 361, 370
PleI	GAGTC	3 cut(s)	394, 467, 1093
PluTI	GGCGCC	1 cut(s)	911
PpsI	GAGTC	3 cut(s)	394, 467, 1093
Psp124BI	GAGCTC	1 cut(s)	504
Psp1406I	AACGTT	1 cut(s)	1239
Psp6I	CCWGG	1 cut(s)	222
PspEI	GGTNACC	1 cut(s)	283
PspFI	CCCAGC	1 cut(s)	1379
PspGI	CCWGG	1 cut(s)	222
PspLI	CGTACG	2 cut(s)	375, 405
PspN4I	GGNNCC	4 cut(s)	153, 179, 613, 909
PstNI	CAGNNNCTG	1 cut(s)	163
PsuI	RGATCY	3 cut(s)	1220, 1471, 1546
RruI	TCGCGA	1 cut(s)	306
RsaI	GTAC	4 cut(s)	32, 101, 377, 407
RsaNI	GTAC	4 cut(s)	31, 100, 376, 406
Rsr2I	CGGWCCG	1 cut(s)	410
RsrII	CGGWCCG	1 cut(s)	410
SacI	GAGCTC	1 cut(s)	504
SacII	CCGCGG	1 cut(s)	360
SalI	GTCGAC	1 cut(s)	470
SatI	GCNGC	3 cut(s)	357, 360, 369
Sau3AI	GATC	7 cut(s)	52, 132, 534, 805, 1220, 1471, 1546
SchI	GAGTC	3 cut(s)	394, 467, 1094
ScrFI	CCNGG	4 cut(s)	150, 224, 717, 727
SduI	GDGCHC	2 cut(s)	504, 642
SfaNI	GCATC	3 cut(s)	14, 1153, 1398
SfcI	CTRYAG	1 cut(s)	1324
SfoI	GGCGCC	1 cut(s)	909
Sfr303I	CCGCGG	1 cut(s)	360
SgrBI	CCGCGG	1 cut(s)	360
SinI	GGWCC	4 cut(s)	152, 319, 410, 769
SmlI	CTYRAG	1 cut(s)	314
SmoI	CTYRAG	1 cut(s)	314
Sse9I	AATT	5 cut(s)	520, 1100, 1186, 1266, 1448
SspDI	GGCGCC	1 cut(s)	907
SspMI	CTAG	2 cut(s)	998, 1550
SstI	GAGCTC	1 cut(s)	504
StyD4I	CCNGG	4 cut(s)	148, 222, 715, 725
StyI	CCWWGG	3 cut(s)	168, 903, 1535
TaaI	ACNGT	6 cut(s)	39, 271, 469, 514, 616, 1328
TaiI	ACGT	6 cut(s)	351, 377, 555, 579, 869, 1242
TaqI	TCGA	5 cut(s)	192, 387, 471, 655, 1095
TasI	AATT	5 cut(s)	520, 1100, 1186, 1266, 1448
TatI	WGTACW	1 cut(s)	30
TauI	GCSGC	3 cut(s)	359, 362, 371
TfiI	GAWTC	5 cut(s)	11, 310, 384, 899, 1510
TscAI	CASTG	2 cut(s)	472, 1333
TspDTI	ATGAA	3 cut(s)	61, 1025, 1139
TspGWI	ACGGA	3 cut(s)	393, 423, 692
TspRI	CASTG	2 cut(s)	472, 1333
VpaK11BI	GGWCC	4 cut(s)	152, 319, 410, 769
XapI	RAATTY	1 cut(s)	520
XceI	RCATGY	1 cut(s)	601
XmiI	GTMKAC	1 cut(s)	471
XmnI	GAANNNNTTC	1 cut(s)	1337
XspI	CTAG	2 cut(s)	998, 1550
ZraI	GACGTC	1 cut(s)	349
Zsp2I	ATGCAT	1 cut(s)	1413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.