Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0000377

Physical Location & Seq

Genomic Coordinates Reverse (-)

17643537 .. 17645998

Gene Structure 2462 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G017010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGGAATCCAGTTCCTTATCCTCACTGTGGTCGGAAACCAAGAGCGAGAGTTGGGGAGTGTTCTTCACTCTCTCGGCAATTTTTGCTGCATTTTTTTACTCATGGAGTTGCATGAGAGAATCCAAGAGTAGCAGAATGTCGCCGCCGTTGCCTCCTGGTCCCCGTGGCTTCCCACTGGTTGGTAACCTTCTGTCCCTTGACTCAGAGCTCCATTCCTACTTTGCTGGCCTAGCCAAGACCTACGGCCCAATCTTTAAGCTACGACTGGGTACCAGGCTCTGCGTCGTAATAGCCTCCCCTTCCATCGCTCGAGAGGTCCTCAAGGACCATGACGCCACGTTCGCCAATCGCGGCGTCAATGTTGCAGCTGGGGACGTCGCACTCTACGGCGGGGCAGATATAGTTTTTGCCCCTTACGGGCCGGAGTGGCGAATGATGAGGAAAGTGTGCGCGCTCAAGATGCTTAGCAACACCGCCTTGGACTCGGTTCAAGAACTGCGCCACAAGCAAGTCCGAAAAGCTGTGGGTTACTTCTATAGTAGGGTCGGGTCCCCCGTCGACGTTGGTGAGCAACTTTTCGTGGCCATTCTCAATCTTACCACCAACATGTTATGGGGTGGCACCATGGAGGAGGAGGGGGTCGGGGCTGGGGTTTTGGCCGAGTTTAGGGAAGCAATGCGGGACATCGCGGAGCTTTCTGGGAAACCCAATATTTCGGAACTTTATCCGGGTTTGGCCCGGTTTGATAGGATTTTTGAGAAAGTTATCAATCAAAGGTTGACGATGCAGAAAGAAGGCGCGAAAGAGAGCAATGATTTCTTGACATTTCTATTGCGATCTATAGATGAAGGAGGAGACGGCAAAACTCCTCTGACCATGACTCATCTCAAAGCCATGCTCTTGGATATGGTTGTGGGTAGTACTGACACATCCGCCACCACAATTGAGTTTGCAATGGCTGAAATTATGAACAAACCAGTGGTGTTACAGAAAGCCCTGAAAGAATTAGACGTTGTAGTTGGGAAAGACAGTATTGTACAAGAGTCTCATATTCACAAACTACCATACCTGGATGCTGTGATGAAAGAAACTCTGCGCTTGCACCCAGCCCTGCCTGTATTAATTCCACACTGTCCAAGTGAAACATGCACTGTGGGAGGTTATACCATTCCAAAGGGGTCTAGGATTTTTGTTAATGTGTGGGATATCCATAGAGACTCTTCTAACTGGAAAAACCCATTAGAGTTTAATCCAGAGAGGTTCTTGAATGGTAAGTATGACTACACTGGAAGTGACTTCAACTATTTTCCATTTGGGAGTGGAAAAAGAATATGTCCAGGGATAGCAACGGCAGAGAGGCTTGTCATGCATTTACTTGCATCACTGTTGCATTCTTTTGACTGGAAACTACCACAAGGAGAGACGAAGTTAGATGTTTCCGAGAAGTTTGGCCTTGTGATGAAGAAGAAGGTACCTATGGTTGCCATCCCAACTCCAAGGTTATTGGATTCAGAACTTTATCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0016020 GO:0019748 GO:0042221 GO:0044550 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934

Pfam Domains

Protein Families

p450

Protein Analysis

508

Amino Acids

56.45

Weight (kDa)

7.17

Isoelectric Point (pI)

39.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	51 - 491	4.9e-94	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca	FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica	MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica	Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis	pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis	RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata	RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora	Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii	Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa	Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha	Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana	Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	378
Acc65I	GGTACC	2 cut(s)	269, 1471
AccB1I	GGYRCC	3 cut(s)	269, 620, 1471
AccB7I	CCANNNNNTGG	1 cut(s)	179
AccI	GTMKAC	1 cut(s)	558
AccII	CGCG	4 cut(s)	351, 452, 689, 800
AciI	CCGC	7 cut(s)	143, 351, 390, 474, 679, 689, 933
AcoI	YGGCCR	2 cut(s)	582, 657
AcyI	GRCGYC	3 cut(s)	333, 354, 375
AfaI	GTAC	4 cut(s)	271, 922, 1038, 1473
AfiI	CCNNNNNNNGG	4 cut(s)	27, 179, 417, 666
AflIII	ACRYGT	1 cut(s)	606
AgsI	TTSAA	3 cut(s)	491, 1267, 1300
AjnI	CCWGG	4 cut(s)	154, 272, 1068, 1336
AluBI	AGCT	5 cut(s)	208, 259, 368, 521, 694
AluI	AGCT	5 cut(s)	208, 259, 368, 521, 694
Alw21I	GWGCWC	1 cut(s)	210
Alw26I	GTCTC	4 cut(s)	849, 1050, 1209, 1415
AlwNI	CAGNNNCTG	1 cut(s)	279
Ama87I	CYCGRG	1 cut(s)	309
AoxI	GGCC	7 cut(s)	226, 244, 419, 582, 657, 735, 1450
ApeKI	GCWGC	2 cut(s)	86, 365
ArsI	GACNNNNNNTTYG	2 cut(s)	323, 355
AseI	ATTAAT	1 cut(s)	1121
Asp718I	GGTACC	2 cut(s)	269, 1471
AspLEI	GCGC	5 cut(s)	452, 454, 501, 800, 1098
AspS9I	GGNCC	7 cut(s)	158, 245, 316, 325, 419, 549, 736
AsuC2I	CCSGG	2 cut(s)	729, 739
AsuHPI	GGTGA	1 cut(s)	578
AvaI	CYCGRG	1 cut(s)	309
AvaII	GGWCC	4 cut(s)	158, 316, 325, 549
BalI	TGGCCA	1 cut(s)	584
BanI	GGYRCC	3 cut(s)	269, 620, 1471
BanII	GRGCYC	1 cut(s)	210
Bbv12I	GWGCWC	1 cut(s)	210
BbvI	GCAGC	2 cut(s)	73, 377
BccI	CCATC	2 cut(s)	311, 1493
BceAI	ACGGC	5 cut(s)	130, 259, 403, 874, 1365
BciT130I	CCWGG	4 cut(s)	156, 274, 1070, 1338
BcnI	CCSGG	2 cut(s)	729, 739
BcoDI	GTCTC	4 cut(s)	849, 1050, 1209, 1415
BfaI	CTAG	2 cut(s)	230, 1182
BfmI	CTRYAG	2 cut(s)	535, 840
BglI	GCCNNNNNGGC	1 cut(s)	427
BisI	GCNGC	4 cut(s)	87, 143, 352, 366
BlpI	GCTNAGC	1 cut(s)	464
BlsI	GCNGC	4 cut(s)	88, 144, 353, 367
BmcAI	AGTACT	1 cut(s)	922
Bme1390I	CCNGG	6 cut(s)	156, 274, 729, 739, 1070, 1338
Bme18I	GGWCC	4 cut(s)	158, 316, 325, 549
BmeT110I	CYCGRG	1 cut(s)	309
BmgT120I	GGNCC	7 cut(s)	158, 245, 316, 325, 419, 549, 736
BmiI	GGNNCC	6 cut(s)	160, 271, 550, 551, 622, 1473
BmrFI	CCNGG	6 cut(s)	156, 274, 729, 739, 1070, 1338
BmrI	ACTGGG	1 cut(s)	275
BmsI	GCATC	4 cut(s)	450, 774, 1063, 1388
BmuI	ACTGGG	1 cut(s)	275
BplI	GAGNNNNNCTC	2 cut(s)	303, 335
Bpu1102I	GCTNAGC	1 cut(s)	464
BpuEI	CTTGAG	2 cut(s)	305, 440
BpuMI	CCSGG	2 cut(s)	729, 739
BsaHI	GRCGYC	3 cut(s)	333, 354, 375
BsaJI	CCNNGG	5 cut(s)	163, 477, 624, 1337, 1496
Bsc4I	CCNNNNNNNGG	4 cut(s)	27, 179, 417, 666
Bse1I	ACTGG	7 cut(s)	9, 180, 270, 977, 1232, 1291, 1406
Bse3DI	GCAATG	3 cut(s)	681, 817, 960
BseBI	CCWGG	4 cut(s)	156, 274, 1070, 1338
BseDI	CCNNGG	5 cut(s)	163, 477, 624, 1337, 1496
BseGI	GGATG	3 cut(s)	929, 1078, 1485
BseLI	CCNNNNNNNGG	4 cut(s)	27, 179, 417, 666
BseMI	GCAATG	3 cut(s)	681, 817, 960
BseMII	CTCAG	1 cut(s)	216
BseNI	ACTGG	7 cut(s)	9, 180, 270, 977, 1232, 1291, 1406
BsePI	GCGCGC	1 cut(s)	450
BseRI	GAGGAG	4 cut(s)	644, 647, 858, 867
BseXI	GCAGC	2 cut(s)	73, 377
BseYI	CCCAGC	3 cut(s)	368, 647, 1105
Bsh1236I	CGCG	4 cut(s)	351, 452, 689, 800
BshFI	GGCC	7 cut(s)	228, 246, 421, 584, 659, 737, 1452
BshNI	GGYRCC	3 cut(s)	269, 620, 1471
BsiHKAI	GWGCWC	1 cut(s)	210
BsiHKCI	CYCGRG	1 cut(s)	309
BsiSI	CCGG	3 cut(s)	422, 728, 739
BslFI	GGGAC	5 cut(s)	144, 178, 386, 535, 695
BslI	CCNNNNNNNGG	4 cut(s)	27, 179, 417, 666
BsmAI	GTCTC	4 cut(s)	849, 1050, 1209, 1415
BsmBI	CGTCTC	2 cut(s)	849, 1415
BsmFI	GGGAC	5 cut(s)	144, 178, 386, 535, 695
BsmI	GAATGC	1 cut(s)	1390
BsnI	GGCC	7 cut(s)	228, 246, 421, 584, 659, 737, 1452
BsoBI	CYCGRG	1 cut(s)	309
Bsp1286I	GDGCHC	1 cut(s)	210
Bsp1407I	TGTACA	1 cut(s)	1036
Bsp143I	GATC	1 cut(s)	836
Bsp1720I	GCTNAGC	1 cut(s)	464
Bsp19I	CCATGG	1 cut(s)	624
BspACI	CCGC	7 cut(s)	143, 351, 390, 474, 679, 689, 933
BspANI	GGCC	7 cut(s)	228, 246, 421, 584, 659, 737, 1452
BspCNI	CTCAG	1 cut(s)	215
BspFNI	CGCG	4 cut(s)	351, 452, 689, 800
BspLI	GGNNCC	6 cut(s)	160, 271, 550, 551, 622, 1473
BspT107I	GGYRCC	3 cut(s)	269, 620, 1471
BsrDI	GCAATG	3 cut(s)	681, 817, 960
BsrGI	TGTACA	1 cut(s)	1036
BsrI	ACTGG	7 cut(s)	9, 180, 270, 977, 1232, 1291, 1406
BssECI	CCNNGG	5 cut(s)	163, 477, 624, 1337, 1496
BssHII	GCGCGC	1 cut(s)	450
BssMI	GATC	1 cut(s)	836
BssNI	GRCGYC	3 cut(s)	333, 354, 375
BssT1I	CCWWGG	3 cut(s)	477, 624, 1496
Bst2UI	CCWGG	4 cut(s)	156, 274, 1070, 1338
Bst4CI	ACNGT	5 cut(s)	27, 1031, 1133, 1153, 1386
Bst6I	CTCTTC	1 cut(s)	1225
BstACI	GRCGYC	3 cut(s)	333, 354, 375
BstAPI	GCANNNNNTGC	1 cut(s)	83
BstAUI	TGTACA	1 cut(s)	1036
BstC8I	GCNNGC	3 cut(s)	226, 452, 1100
BstDEI	CTNAG	2 cut(s)	202, 464
BstDSI	CCRYGG	2 cut(s)	163, 624
BstEII	GGTNACC	1 cut(s)	182
BstF5I	GGATG	3 cut(s)	929, 1078, 1485
BstFNI	CGCG	4 cut(s)	351, 452, 689, 800
BstHHI	GCGC	5 cut(s)	452, 454, 501, 800, 1098
BstKTI	GATC	1 cut(s)	839
BstMAI	GTCTC	4 cut(s)	849, 1050, 1209, 1415
BstMBI	GATC	1 cut(s)	836
BstMWI	GCNNNNNNNGC	8 cut(s)	83, 148, 230, 341, 427, 460, 505, 1366
BstNI	CCWGG	4 cut(s)	156, 274, 1070, 1338
BstNSI	RCATGY	2 cut(s)	610, 1149
BstPI	GGTNACC	1 cut(s)	182
BstSCI	CCNGG	6 cut(s)	154, 272, 727, 737, 1068, 1336
BstSFI	CTRYAG	2 cut(s)	535, 840
BstUI	CGCG	4 cut(s)	351, 452, 689, 800
BstV1I	GCAGC	2 cut(s)	73, 377
BstXI	CCANNNNNNTGG	1 cut(s)	901
BsuRI	GGCC	7 cut(s)	228, 246, 421, 584, 659, 737, 1452
BtgI	CCRYGG	2 cut(s)	163, 624
BtgZI	GCGATG	2 cut(s)	289, 670
BtsCI	GGATG	3 cut(s)	929, 1078, 1485
BtsIMutI	CAGTG	7 cut(s)	23, 173, 984, 1129, 1149, 1284, 1382
Cac8I	GCNNGC	3 cut(s)	226, 452, 1100
CaiI	CAGNNNCTG	1 cut(s)	279
CfoI	GCGC	5 cut(s)	452, 454, 501, 800, 1098
Cfr13I	GGNCC	7 cut(s)	158, 245, 316, 325, 419, 549, 736
CseI	GACGC	3 cut(s)	271, 341, 343
Csp6I	GTAC	4 cut(s)	270, 921, 1037, 1472
CspCI	CAANNNNNGTGG	2 cut(s)	925, 960
CviAII	CATG	9 cut(s)	102, 112, 329, 607, 625, 877, 895, 1146, 1366
CviQI	GTAC	4 cut(s)	270, 921, 1037, 1472
DdeI	CTNAG	2 cut(s)	202, 464
DpnI	GATC	1 cut(s)	838
DpnII	GATC	1 cut(s)	836
EaeI	YGGCCR	2 cut(s)	582, 657
Eam1104I	CTCTTC	1 cut(s)	1225
EarI	CTCTTC	1 cut(s)	1225
EciI	GGCGGA	1 cut(s)	922
Ecl136II	GAGCTC	1 cut(s)	208
Eco130I	CCWWGG	3 cut(s)	477, 624, 1496
Eco24I	GRGCYC	1 cut(s)	210
Eco32I	GATATC	1 cut(s)	1207
Eco47I	GGWCC	4 cut(s)	158, 316, 325, 549
Eco53kI	GAGCTC	1 cut(s)	208
Eco88I	CYCGRG	1 cut(s)	309
Eco91I	GGTNACC	1 cut(s)	182
EcoICRI	GAGCTC	1 cut(s)	208
EcoO109I	RGGNCCY	2 cut(s)	316, 549
EcoO65I	GGTNACC	1 cut(s)	182
EcoRII	CCWGG	4 cut(s)	154, 272, 1068, 1336
EcoRV	GATATC	1 cut(s)	1207
EcoT14I	CCWWGG	3 cut(s)	477, 624, 1496
EcoT22I	ATGCAT	1 cut(s)	1371
EcoT38I	GRGCYC	1 cut(s)	210
ErhI	CCWWGG	3 cut(s)	477, 624, 1496
Esp3I	CGTCTC	2 cut(s)	849, 1415
FaeI	CATG	9 cut(s)	105, 115, 332, 610, 628, 880, 898, 1149, 1369
FaqI	GGGAC	5 cut(s)	144, 178, 386, 535, 695
FatI	CATG	9 cut(s)	101, 111, 328, 606, 624, 876, 894, 1145, 1365
FauI	CCCGC	2 cut(s)	383, 672
FblI	GTMKAC	1 cut(s)	558
Fnu4HI	GCNGC	4 cut(s)	87, 143, 352, 366
FokI	GGATG	3 cut(s)	916, 1085, 1472
FriOI	GRGCYC	1 cut(s)	210
Fsp4HI	GCNGC	4 cut(s)	87, 143, 352, 366
FspBI	CTAG	2 cut(s)	230, 1182
GlaI	GCGC	5 cut(s)	451, 453, 500, 799, 1097
GluI	GCNGC	4 cut(s)	87, 143, 352, 366
GsaI	CCCAGC	3 cut(s)	372, 651, 1109
HaeIII	GGCC	7 cut(s)	228, 246, 421, 584, 659, 737, 1452
HapII	CCGG	3 cut(s)	422, 728, 739
HgaI	GACGC	3 cut(s)	271, 341, 343
HhaI	GCGC	5 cut(s)	452, 454, 501, 800, 1098
Hin1I	GRCGYC	3 cut(s)	333, 354, 375
Hin1II	CATG	9 cut(s)	105, 115, 332, 610, 628, 880, 898, 1149, 1369
Hin6I	GCGC	5 cut(s)	450, 452, 499, 798, 1096
HinP1I	GCGC	5 cut(s)	450, 452, 499, 798, 1096
HincII	GTYRAC	2 cut(s)	559, 780
HindII	GTYRAC	2 cut(s)	559, 780
HinfI	GANTC	8 cut(s)	5, 119, 200, 482, 880, 1043, 1217, 1508
HpaII	CCGG	3 cut(s)	422, 728, 739
HphI	GGTGA	1 cut(s)	578
Hpy166II	GTNNAC	2 cut(s)	559, 780
Hpy188I	TCNGA	7 cut(s)	34, 205, 515, 718, 873, 1441, 1513
Hpy188III	TCNNGA	6 cut(s)	311, 457, 491, 820, 1253, 1264
Hpy8I	GTNNAC	2 cut(s)	559, 780
Hpy99I	CGWCG	4 cut(s)	287, 380, 560, 563
HpyAV	CCTTC	5 cut(s)	197, 309, 788, 842, 1462
HpyCH4III	ACNGT	5 cut(s)	27, 1031, 1133, 1153, 1386
HpyCH4IV	ACGT	4 cut(s)	338, 375, 561, 1011
HpyF10VI	GCNNNNNNNGC	8 cut(s)	83, 148, 230, 341, 427, 460, 505, 1366
HpyF3I	CTNAG	2 cut(s)	202, 464
HpySE526I	ACGT	4 cut(s)	338, 375, 561, 1011
Hsp92I	GRCGYC	3 cut(s)	333, 354, 375
Hsp92II	CATG	9 cut(s)	105, 115, 332, 610, 628, 880, 898, 1149, 1369
HspAI	GCGC	5 cut(s)	450, 452, 499, 798, 1096
KflI	GGGWCCC	1 cut(s)	549
KpnI	GGTACC	2 cut(s)	273, 1475
Kzo9I	GATC	1 cut(s)	836
LmnI	GCTCC	2 cut(s)	213, 691
Lsp1109I	GCAGC	2 cut(s)	73, 377
LweI	GCATC	4 cut(s)	450, 774, 1063, 1388
MaeI	CTAG	2 cut(s)	230, 1182
MaeII	ACGT	4 cut(s)	338, 375, 561, 1011
MaeIII	GTNAC	4 cut(s)	182, 527, 984, 1292
MalI	GATC	1 cut(s)	838
MboI	GATC	1 cut(s)	836
MboII	GAAGA	4 cut(s)	55, 1212, 1474, 1477
MfeI	CAATTG	1 cut(s)	942
MhlI	GDGCHC	1 cut(s)	210
MlsI	TGGCCA	1 cut(s)	584
MluCI	AATT	5 cut(s)	78, 942, 963, 1004, 1122
MluNI	TGGCCA	1 cut(s)	584
MlyI	GAGTC	5 cut(s)	194, 476, 874, 1052, 1211
MmeI	TCCRAC	1 cut(s)	12
Mox20I	TGGCCA	1 cut(s)	584
Mph1103I	ATGCAT	1 cut(s)	1371
MscI	TGGCCA	1 cut(s)	584
MseI	TTAA	4 cut(s)	255, 1121, 1194, 1248
MslI	CAYNNNNRTG	1 cut(s)	605
Msp20I	TGGCCA	1 cut(s)	584
MspA1I	CMGCKG	1 cut(s)	368
MspI	CCGG	3 cut(s)	422, 728, 739
MspR9I	CCNGG	6 cut(s)	156, 274, 729, 739, 1070, 1338
MunI	CAATTG	1 cut(s)	942
Mva1269I	GAATGC	1 cut(s)	1390
MvaI	CCWGG	4 cut(s)	156, 274, 1070, 1338
MvnI	CGCG	4 cut(s)	351, 452, 689, 800
MwoI	GCNNNNNNNGC	8 cut(s)	83, 148, 230, 341, 427, 460, 505, 1366
NciI	CCSGG	2 cut(s)	729, 739
NcoI	CCATGG	1 cut(s)	624
NdeII	GATC	1 cut(s)	836
NlaIII	CATG	9 cut(s)	105, 115, 332, 610, 628, 880, 898, 1149, 1369
NlaIV	GGNNCC	6 cut(s)	160, 271, 550, 551, 622, 1473
NmeAIII	GCCGAG	2 cut(s)	53, 685
NmuCI	GTSAC	1 cut(s)	1292
NsiI	ATGCAT	1 cut(s)	1371
NspI	RCATGY	2 cut(s)	610, 1149
PaeR7I	CTCGAG	1 cut(s)	309
PauI	GCGCGC	1 cut(s)	450
PciI	ACATGT	1 cut(s)	606
PcsI	WCGNNNNNNNCGW	1 cut(s)	552
PctI	GAATGC	1 cut(s)	1390
PfeI	GAWTC	3 cut(s)	5, 119, 1508
PflMI	CCANNNNNTGG	1 cut(s)	179
PkrI	GCNGC	4 cut(s)	88, 144, 353, 367
PleI	GAGTC	5 cut(s)	194, 476, 874, 1051, 1211
PpsI	GAGTC	5 cut(s)	194, 476, 874, 1051, 1211
PpuMI	RGGWCCY	2 cut(s)	316, 549
PscI	ACATGT	1 cut(s)	606
PshBI	ATTAAT	1 cut(s)	1121
Psp124BI	GAGCTC	1 cut(s)	210
Psp5II	RGGWCCY	2 cut(s)	316, 549
Psp6I	CCWGG	4 cut(s)	154, 272, 1068, 1336
PspEI	GGTNACC	1 cut(s)	182
PspFI	CCCAGC	3 cut(s)	368, 647, 1105
PspGI	CCWGG	4 cut(s)	154, 272, 1068, 1336
PspN4I	GGNNCC	6 cut(s)	160, 271, 550, 551, 622, 1473
PspPI	GGNCC	7 cut(s)	158, 245, 316, 325, 419, 549, 736
PspPPI	RGGWCCY	2 cut(s)	316, 549
PstNI	CAGNNNCTG	1 cut(s)	279
PteI	GCGCGC	1 cut(s)	450
PvuII	CAGCTG	1 cut(s)	368
RsaI	GTAC	4 cut(s)	271, 922, 1038, 1473
RsaNI	GTAC	4 cut(s)	270, 921, 1037, 1472
RseI	CAYNNNNRTG	1 cut(s)	605
SacI	GAGCTC	1 cut(s)	210
SalI	GTCGAC	1 cut(s)	557
SaqAI	TTAA	4 cut(s)	255, 1121, 1194, 1248
SatI	GCNGC	4 cut(s)	87, 143, 352, 366
Sau3AI	GATC	1 cut(s)	836
Sau96I	GGNCC	7 cut(s)	158, 245, 316, 325, 419, 549, 736
ScaI	AGTACT	1 cut(s)	922
SchI	GAGTC	5 cut(s)	194, 476, 874, 1052, 1211
ScrFI	CCNGG	6 cut(s)	156, 274, 729, 739, 1070, 1338
SduI	GDGCHC	1 cut(s)	210
SfaNI	GCATC	4 cut(s)	450, 774, 1063, 1388
SfcI	CTRYAG	2 cut(s)	535, 840
Sfr274I	CTCGAG	1 cut(s)	309
SgrDI	CGTCGACG	1 cut(s)	557
SinI	GGWCC	4 cut(s)	158, 316, 325, 549
SlaI	CTCGAG	1 cut(s)	309
SmiMI	CAYNNNNRTG	1 cut(s)	605
SmlI	CTYRAG	3 cut(s)	309, 320, 455
SmoI	CTYRAG	3 cut(s)	309, 320, 455
Sse9I	AATT	5 cut(s)	78, 942, 963, 1004, 1122
SsiI	CCGC	7 cut(s)	143, 351, 390, 474, 679, 689, 933
SspI	AATATT	1 cut(s)	712
SspMI	CTAG	2 cut(s)	230, 1182
SstI	GAGCTC	1 cut(s)	210
StyD4I	CCNGG	6 cut(s)	154, 272, 727, 737, 1068, 1336
StyI	CCWWGG	3 cut(s)	477, 624, 1496
TaaI	ACNGT	5 cut(s)	27, 1031, 1133, 1153, 1386
TaiI	ACGT	4 cut(s)	341, 378, 564, 1014
TaqI	TCGA	2 cut(s)	310, 558
TasI	AATT	5 cut(s)	78, 942, 963, 1004, 1122
TatI	WGTACW	2 cut(s)	920, 1036
TauI	GCSGC	2 cut(s)	145, 354
TfiI	GAWTC	3 cut(s)	5, 119, 1508
Tru1I	TTAA	4 cut(s)	255, 1121, 1194, 1248
Tru9I	TTAA	4 cut(s)	255, 1121, 1194, 1248
TscAI	CASTG	7 cut(s)	30, 180, 984, 1136, 1156, 1291, 1389
TseFI	GTSAC	1 cut(s)	1292
TseI	GCWGC	2 cut(s)	86, 365
Tsp45I	GTSAC	1 cut(s)	1292
TspDTI	ATGAA	4 cut(s)	861, 983, 1097, 1475
TspRI	CASTG	7 cut(s)	30, 180, 984, 1136, 1156, 1291, 1389
Van91I	CCANNNNNTGG	1 cut(s)	179
VpaK11BI	GGWCC	4 cut(s)	158, 316, 325, 549
VspI	ATTAAT	1 cut(s)	1121
XceI	RCATGY	2 cut(s)	610, 1149
XhoI	CTCGAG	1 cut(s)	309
XmiI	GTMKAC	1 cut(s)	558
XspI	CTAG	2 cut(s)	230, 1182
ZraI	GACGTC	1 cut(s)	376
ZrmI	AGTACT	1 cut(s)	922
Zsp2I	ATGCAT	1 cut(s)	1371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.