Rh7DG199900

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
18842415 .. 18843674
1260 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG199900.1

Sequence Viewer

Length: 1014 bp
ATGGCATCCACTTATGAATTCTTCATGGAATCCAATTCCTTATCCTCACTGTGGTCGGAAAACAACAGCGGGAGTTGGGGAGTGTTGTTCACTATCTCCGCAATTTTTGCAGCAATTGTTTACGCATGGAGTTGCCTGAAGAGTAGCAGAATCTCGCCGCCGTTGCCTCCCGGTCCACGCGGCCTCCCGCTGGTTGGTAATCTTCTGTCCGTTGACCCACAGCTCCACACCTACTTTGCGGGCCTATCCAAAACTTACGGCCCAATCTATAAGCTCCGACTGGGTACCAGGCTCTGTGTCGTAATAGCCTCCCCTTCCGCCGCTCGAGAGGTGCTCAAGGAGAATGACCTCACGTTCTCCAGTCGCGGCGTCAATTGTGCAGCTGGGGATGTAGCACTCTACGGCGGGGCAGGTATAGTTTGTACCCCGTACGGGCCGGAGTGGCGAATGTTGAGGAAAGTGTGCGTGCTCAAGATGCTTAGCAACACCGCCTTGGACTCGGTTCACCAACTGCGCCACTCGCAGGTCCGAAAAGCTGTGCGTTACTTCTATAGTCAGGTTGGATCGCCCGTCAACATTGGTGAGCAACTTTTCGTTGCCACGCTCAACCTTACCACCAACATGTTATGGGGTGGCACCATGCTGGAGGAGGAGGCTGGGGCTGAGGTTTTGGCGGAGTTTAGGGAAGCGATGGTCGACATCGCGGTGCTTTCTGGGAAGCCTAATATTTCGGAGCTTTATCCGTTTTTGACCAGGTTTGATGTGCAAGGCATAAGGAAGCAGATGAAGGCTGTGGAGCTCAAGTTTGATAGCATTTTTGAGAAAGTTATTGAACAACGGTTGAAAATGGACAAACAAGGCGCGCAAGAGAGCAAGGATTTTTTGACATTTATGTTGCGATATAAAGATGAAGGAGGAGATGCCAAAACTCCTCTCACCATGACACATCTCAAAGCCTTGCTCTTGGTACGTTTTTTAAAAACTCCATACAAGCATTTCTACAATTTTTTTTAG

Protein Analysis

337

Amino Acids

37.65

Weight (kDa)

9.05

Isoelectric Point (pI)

36.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 56 - 323 8.2e-32 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000377)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 401, 514
Acc65I GGTACC 1 cut(s) 284
AccB1I GGYRCC 2 cut(s) 284, 635
AccBSI CCGCTC 1 cut(s) 323
AccI GTMKAC 1 cut(s) 696
AccII CGCG 4 cut(s) 180, 366, 704, 863
AclWI GGATC 1 cut(s) 571
AcsI RAATTY 1 cut(s) 17
AcuI CTGAAG 1 cut(s) 158
AcyI GRCGYC 1 cut(s) 369
AfaI GTAC 4 cut(s) 286, 424, 431, 969
AfiI CCNNNNNNNGG 5 cut(s) 51, 190, 194, 432, 523
AflIII ACRYGT 1 cut(s) 621
AgsI TTSAA 2 cut(s) 833, 844
AjnI CCWGG 2 cut(s) 287, 752
AluBI AGCT 6 cut(s) 223, 274, 383, 536, 736, 799
AluI AGCT 6 cut(s) 223, 274, 383, 536, 736, 799
Alw21I GWGCWC 3 cut(s) 336, 471, 801
AlwI GGATC 1 cut(s) 571
AlwNI CAGNNNCTG 1 cut(s) 294
Ama87I CYCGRG 1 cut(s) 324
AoxI GGCC 4 cut(s) 181, 241, 259, 434
ApeKI GCWGC 2 cut(s) 110, 380
ApoI RAATTY 1 cut(s) 17
Asp718I GGTACC 1 cut(s) 284
AspLEI GCGC 3 cut(s) 516, 863, 865
AspS9I GGNCC 5 cut(s) 173, 241, 260, 434, 526
AsuC2I CCSGG 1 cut(s) 171
AsuHPI GGTGA 3 cut(s) 497, 593, 928
AvaI CYCGRG 1 cut(s) 324
AvaII GGWCC 2 cut(s) 173, 526
BanI GGYRCC 2 cut(s) 284, 635
BanII GRGCYC 1 cut(s) 801
Bbv12I GWGCWC 3 cut(s) 336, 471, 801
BbvCI CCTCAGC 1 cut(s) 663
BbvI GCAGC 2 cut(s) 122, 392
BccI CCATC 1 cut(s) 685
BceAI ACGGC 3 cut(s) 145, 274, 418
BciT130I CCWGG 2 cut(s) 289, 754
BcnI CCSGG 1 cut(s) 171
BfmI CTRYAG 1 cut(s) 550
BfuAI ACCTGC 2 cut(s) 401, 514
BglI GCCNNNNNGGC 1 cut(s) 442
BisI GCNGC 6 cut(s) 111, 158, 181, 321, 367, 381
BlpI GCTNAGC 1 cut(s) 479
BlsI GCNGC 6 cut(s) 112, 159, 182, 322, 368, 382
Bme1390I CCNGG 3 cut(s) 171, 289, 754
Bme18I GGWCC 2 cut(s) 173, 526
BmeT110I CYCGRG 1 cut(s) 324
BmgT120I GGNCC 5 cut(s) 173, 241, 260, 434, 526
BmiI GGNNCC 2 cut(s) 286, 637
BmrFI CCNGG 3 cut(s) 171, 289, 754
BmrI ACTGGG 1 cut(s) 290
BmsI GCATC 3 cut(s) 14, 465, 910
BmuI ACTGGG 1 cut(s) 290
BplI GAGNNNNNCTC 2 cut(s) 318, 350
BpmI CTGGAG 2 cut(s) 343, 665
Bpu10I CCTNAGC 1 cut(s) 663
Bpu1102I GCTNAGC 1 cut(s) 479
BpuEI CTTGAG 3 cut(s) 320, 455, 785
BpuMI CCSGG 1 cut(s) 171
BsaHI GRCGYC 1 cut(s) 369
BsaJI CCNNGG 1 cut(s) 492
BsaXI ACNNNNNCTCC 4 cut(s) 168, 198, 788, 818
Bsc4I CCNNNNNNNGG 5 cut(s) 51, 190, 194, 432, 523
Bse1I ACTGG 2 cut(s) 285, 360
BseBI CCWGG 2 cut(s) 289, 754
BseDI CCNNGG 1 cut(s) 492
BseGI GGATG 2 cut(s) 5, 394
BseLI CCNNNNNNNGG 5 cut(s) 51, 190, 194, 432, 523
BseMII CTCAG 1 cut(s) 654
BseNI ACTGG 2 cut(s) 285, 360
BsePI GCGCGC 1 cut(s) 861
BseRI GAGGAG 4 cut(s) 662, 665, 921, 930
BseXI GCAGC 2 cut(s) 122, 392
BseYI CCCAGC 2 cut(s) 383, 656
BsgI GTGCAG 1 cut(s) 399
Bsh1236I CGCG 4 cut(s) 180, 366, 704, 863
BshFI GGCC 4 cut(s) 183, 243, 261, 436
BshNI GGYRCC 2 cut(s) 284, 635
BsiHKAI GWGCWC 3 cut(s) 336, 471, 801
BsiHKCI CYCGRG 1 cut(s) 324
BsiSI CCGG 2 cut(s) 171, 437
BsiWI CGTACG 1 cut(s) 429
BslI CCNNNNNNNGG 5 cut(s) 51, 190, 194, 432, 523
BsnI GGCC 4 cut(s) 183, 243, 261, 436
BsoBI CYCGRG 1 cut(s) 324
Bsp1286I GDGCHC 3 cut(s) 336, 471, 801
Bsp143I GATC 1 cut(s) 563
Bsp1720I GCTNAGC 1 cut(s) 479
BspANI GGCC 4 cut(s) 183, 243, 261, 436
BspCNI CTCAG 1 cut(s) 655
BspFNI CGCG 4 cut(s) 180, 366, 704, 863
BspLI GGNNCC 2 cut(s) 286, 637
BspMI ACCTGC 2 cut(s) 401, 514
BspPI GGATC 1 cut(s) 571
BspT107I GGYRCC 2 cut(s) 284, 635
BsrBI CCGCTC 1 cut(s) 323
BsrI ACTGG 2 cut(s) 285, 360
BssECI CCNNGG 1 cut(s) 492
BssHII GCGCGC 1 cut(s) 861
BssMI GATC 1 cut(s) 563
BssNI GRCGYC 1 cut(s) 369
BssT1I CCWWGG 1 cut(s) 492
Bst2UI CCWGG 2 cut(s) 289, 754
Bst4CI ACNGT 2 cut(s) 51, 840
Bst6I CTCTTC 1 cut(s) 134
BstACI GRCGYC 1 cut(s) 369
BstAPI GCANNNNNTGC 1 cut(s) 107
BstC8I GCNNGC 3 cut(s) 241, 467, 863
BstDEI CTNAG 2 cut(s) 479, 663
BstF5I GGATG 2 cut(s) 5, 394
BstFNI CGCG 4 cut(s) 180, 366, 704, 863
BstHHI GCGC 3 cut(s) 516, 863, 865
BstKTI GATC 1 cut(s) 566
BstMBI GATC 1 cut(s) 563
BstMWI GCNNNNNNNGC 5 cut(s) 107, 163, 442, 475, 520
BstNI CCWGG 2 cut(s) 289, 754
BstNSI RCATGY 1 cut(s) 625
BstSCI CCNGG 3 cut(s) 169, 287, 752
BstSFI CTRYAG 1 cut(s) 550
BstUI CGCG 4 cut(s) 180, 366, 704, 863
BstV1I GCAGC 2 cut(s) 122, 392
BsuRI GGCC 4 cut(s) 183, 243, 261, 436
BtgZI GCGATG 2 cut(s) 685, 704
BtsCI GGATG 2 cut(s) 5, 394
BtsIMutI CAGTG 1 cut(s) 47
BveI ACCTGC 2 cut(s) 401, 514
Cac8I GCNNGC 3 cut(s) 241, 467, 863
CaiI CAGNNNCTG 1 cut(s) 294
CfoI GCGC 3 cut(s) 516, 863, 865
Cfr13I GGNCC 5 cut(s) 173, 241, 260, 434, 526
CseI GACGC 1 cut(s) 358
CsiI ACCWGGT 1 cut(s) 752
Csp6I GTAC 4 cut(s) 285, 423, 430, 968
CviAII CATG 5 cut(s) 25, 126, 622, 640, 940
CviQI GTAC 4 cut(s) 285, 423, 430, 968
DdeI CTNAG 2 cut(s) 479, 663
DpnI GATC 1 cut(s) 565
DpnII GATC 1 cut(s) 563
DraI TTTAAA 1 cut(s) 978
Eam1104I CTCTTC 1 cut(s) 134
EarI CTCTTC 1 cut(s) 134
EciI GGCGGA 2 cut(s) 307, 689
Ecl136II GAGCTC 1 cut(s) 799
Eco130I CCWWGG 1 cut(s) 492
Eco24I GRGCYC 1 cut(s) 801
Eco47I GGWCC 2 cut(s) 173, 526
Eco53kI GAGCTC 1 cut(s) 799
Eco57I CTGAAG 1 cut(s) 158
Eco88I CYCGRG 1 cut(s) 324
EcoICRI GAGCTC 1 cut(s) 799
EcoRI GAATTC 1 cut(s) 17
EcoRII CCWGG 2 cut(s) 287, 752
EcoT14I CCWWGG 1 cut(s) 492
EcoT38I GRGCYC 1 cut(s) 801
ErhI CCWWGG 1 cut(s) 492
FaeI CATG 5 cut(s) 28, 129, 625, 643, 943
FatI CATG 5 cut(s) 24, 125, 621, 639, 939
FauI CCCGC 4 cut(s) 62, 195, 232, 398
FblI GTMKAC 1 cut(s) 696
Fnu4HI GCNGC 6 cut(s) 111, 158, 181, 321, 367, 381
FokI GGATG 1 cut(s) 401
FriOI GRGCYC 1 cut(s) 801
Fsp4HI GCNGC 6 cut(s) 111, 158, 181, 321, 367, 381
GlaI GCGC 3 cut(s) 515, 862, 864
GluI GCNGC 6 cut(s) 111, 158, 181, 321, 367, 381
GsaI CCCAGC 2 cut(s) 387, 660
GsuI CTGGAG 2 cut(s) 343, 665
HaeIII GGCC 4 cut(s) 183, 243, 261, 436
HapII CCGG 2 cut(s) 171, 437
HgaI GACGC 1 cut(s) 358
HhaI GCGC 3 cut(s) 516, 863, 865
Hin1I GRCGYC 1 cut(s) 369
Hin1II CATG 5 cut(s) 28, 129, 625, 643, 943
Hin6I GCGC 3 cut(s) 514, 861, 863
HinP1I GCGC 3 cut(s) 514, 861, 863
HincII GTYRAC 3 cut(s) 214, 574, 697
HindII GTYRAC 3 cut(s) 214, 574, 697
HinfI GANTC 3 cut(s) 29, 150, 497
HpaII CCGG 2 cut(s) 171, 437
HphI GGTGA 3 cut(s) 497, 593, 928
Hpy166II GTNNAC 7 cut(s) 90, 121, 176, 214, 505, 574, 697
Hpy188I TCNGA 4 cut(s) 58, 278, 530, 733
Hpy188III TCNNGA 2 cut(s) 326, 472
Hpy8I GTNNAC 7 cut(s) 90, 121, 176, 214, 505, 574, 697
HpyAV CCTTC 3 cut(s) 324, 781, 905
HpyCH4III ACNGT 2 cut(s) 51, 840
HpyCH4IV ACGT 2 cut(s) 353, 970
HpyCH4V TGCA 3 cut(s) 110, 380, 766
HpyF10VI GCNNNNNNNGC 5 cut(s) 107, 163, 442, 475, 520
HpyF3I CTNAG 2 cut(s) 479, 663
HpySE526I ACGT 2 cut(s) 353, 970
Hsp92I GRCGYC 1 cut(s) 369
Hsp92II CATG 5 cut(s) 28, 129, 625, 643, 943
HspAI GCGC 3 cut(s) 514, 861, 863
KpnI GGTACC 1 cut(s) 288
Kzo9I GATC 1 cut(s) 563
LmnI GCTCC 4 cut(s) 228, 279, 733, 796
Lsp1109I GCAGC 2 cut(s) 122, 392
LweI GCATC 3 cut(s) 14, 465, 910
MabI ACCWGGT 1 cut(s) 752
MaeII ACGT 2 cut(s) 353, 970
MaeIII GTNAC 1 cut(s) 542
MalI GATC 1 cut(s) 565
MbiI CCGCTC 1 cut(s) 323
MboI GATC 1 cut(s) 563
MboII GAAGA 3 cut(s) 13, 151, 194
MfeI CAATTG 2 cut(s) 114, 373
MhlI GDGCHC 3 cut(s) 336, 471, 801
MluCI AATT 6 cut(s) 17, 34, 102, 114, 373, 1003
MlyI GAGTC 1 cut(s) 491
MmeI TCCRAC 3 cut(s) 36, 301, 541
MseI TTAA 1 cut(s) 977
MslI CAYNNNNRTG 2 cut(s) 620, 704
MspA1I CMGCKG 3 cut(s) 69, 190, 383
MspI CCGG 2 cut(s) 171, 437
MspR9I CCNGG 3 cut(s) 171, 289, 754
MunI CAATTG 2 cut(s) 114, 373
MvaI CCWGG 2 cut(s) 289, 754
MvnI CGCG 4 cut(s) 180, 366, 704, 863
MwoI GCNNNNNNNGC 5 cut(s) 107, 163, 442, 475, 520
NciI CCSGG 1 cut(s) 171
NdeII GATC 1 cut(s) 563
NlaIII CATG 5 cut(s) 28, 129, 625, 643, 943
NlaIV GGNNCC 2 cut(s) 286, 637
NspI RCATGY 1 cut(s) 625
PaeR7I CTCGAG 1 cut(s) 324
PauI GCGCGC 1 cut(s) 861
PciI ACATGT 1 cut(s) 621
PfeI GAWTC 2 cut(s) 29, 150
Pfl23II CGTACG 1 cut(s) 429
PkrI GCNGC 6 cut(s) 112, 159, 182, 322, 368, 382
PleI GAGTC 1 cut(s) 491
PpsI GAGTC 1 cut(s) 491
PscI ACATGT 1 cut(s) 621
Psp124BI GAGCTC 1 cut(s) 801
Psp6I CCWGG 2 cut(s) 287, 752
PspFI CCCAGC 2 cut(s) 383, 656
PspGI CCWGG 2 cut(s) 287, 752
PspLI CGTACG 1 cut(s) 429
PspN4I GGNNCC 2 cut(s) 286, 637
PspPI GGNCC 5 cut(s) 173, 241, 260, 434, 526
PstNI CAGNNNCTG 1 cut(s) 294
PteI GCGCGC 1 cut(s) 861
PvuII CAGCTG 1 cut(s) 383
RsaI GTAC 4 cut(s) 286, 424, 431, 969
RsaNI GTAC 4 cut(s) 285, 423, 430, 968
RseI CAYNNNNRTG 2 cut(s) 620, 704
SacI GAGCTC 1 cut(s) 801
SalI GTCGAC 1 cut(s) 695
SaqAI TTAA 1 cut(s) 977
SatI GCNGC 6 cut(s) 111, 158, 181, 321, 367, 381
Sau3AI GATC 1 cut(s) 563
Sau96I GGNCC 5 cut(s) 173, 241, 260, 434, 526
SchI GAGTC 1 cut(s) 491
ScrFI CCNGG 3 cut(s) 171, 289, 754
SduI GDGCHC 3 cut(s) 336, 471, 801
SexAI ACCWGGT 1 cut(s) 752
SfaNI GCATC 3 cut(s) 14, 465, 910
SfcI CTRYAG 1 cut(s) 550
Sfr274I CTCGAG 1 cut(s) 324
SinI GGWCC 2 cut(s) 173, 526
SlaI CTCGAG 1 cut(s) 324
SmiMI CAYNNNNRTG 2 cut(s) 620, 704
SmlI CTYRAG 4 cut(s) 324, 335, 470, 800
SmoI CTYRAG 4 cut(s) 324, 335, 470, 800
Sse9I AATT 6 cut(s) 17, 34, 102, 114, 373, 1003
SspI AATATT 1 cut(s) 727
SstI GAGCTC 1 cut(s) 801
StyD4I CCNGG 3 cut(s) 169, 287, 752
StyI CCWWGG 1 cut(s) 492
TaaI ACNGT 2 cut(s) 51, 840
TaiI ACGT 2 cut(s) 356, 973
TaqI TCGA 2 cut(s) 325, 696
TasI AATT 6 cut(s) 17, 34, 102, 114, 373, 1003
TauI GCSGC 4 cut(s) 160, 183, 323, 369
TfiI GAWTC 2 cut(s) 29, 150
Tru1I TTAA 1 cut(s) 977
Tru9I TTAA 1 cut(s) 977
TscAI CASTG 1 cut(s) 54
TseI GCWGC 2 cut(s) 110, 380
TspDTI ATGAA 4 cut(s) 13, 30, 800, 924
TspGWI ACGGA 2 cut(s) 199, 732
TspRI CASTG 1 cut(s) 54
VpaK11BI GGWCC 2 cut(s) 173, 526
XapI RAATTY 1 cut(s) 17
XceI RCATGY 1 cut(s) 625
XhoI CTCGAG 1 cut(s) 324
XmiI GTMKAC 1 cut(s) 696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.