Rroxscaffold_3G00254970

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000377
Physical Location & Seq
Forward (+)
49263063 .. 49266464
3402 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00254970.1

Sequence Viewer

Length: 1665 bp
ATGCAGCAGGGCGCGACGGACTGGAAGCATGGATCGTGGCGGCGGGATTTGGCAGAGCTGCCTAGAAAACTGTTCACGGTGGAGATGGCAGCTGGACTTGTCTCAACCATTCCAGCTGGCCATGCGGTGGGTCTTTCTTTTGGGACTGCCCTTTTGGGCTCGGTTAATTGGACTGGGGTGCTTTGCCCTAGACCCATTCTTATTTCCTTATCCTCACTGTGGTCGGAAACGAAGAGCGGGAGTTGGGGAGTGTTCTTCACTCTCTCGGCAATTTTTGCTGCATTTTTTTACGCATGGAGTTGCATGAGAGAATCCAAGAGTAGCAGAATGTCGCCGCCGTTGCCTCCTGGTCCCCGTGGCCTCCCACTGGTTGGTAACCTTCTGTCCCTCGACCCCGAGCTCCACTCCTACTTTGCTGGCCTGGCCAAAACCTACGGCCCAATCTTTAAGCTTCGACTGGGTACCAGGCTCTGCGTTGTAATAGCCTCCCCTTCCATCGCTCGAGAGGTCCTCAAGGACCATGACGCCACATTCGCCAATCGCGGCGTCAATGTTGCAGCTGGGGACGTCGCACTCTACGGCGGGGCAGATATAGTTTTTGCCCCGTACGGGCCGGAGTGGCGAATGATGAGGAAAGTGTGCGCGCTCAAGATGCTTAGCAACACTGCCTTGGACTCGGTTCAAGAACTGCCCCACAAGCAGGTCCGAAAAGCTGTGGGTTACTTCTATACTCGGGTCGGGTCCCCCGTCGACGTTGGTGAGCAACTTTTCGTGGCCATTCTCAATCTTACCACCAACATGTTATGGGGTGGCACCATGGAGCAGGAGGGGGCCGGGGCTGGGGTTTTGGCCGAGTTTAGGGAAGCAATGCGGGACATCGCGGAGCTTTCTGGGAGACCCAATATTTCGGAGCTTTATCCAGGTTTGGCCCGGTTTGATTTGCAAGGCATAGCGAAGCAGATGAAGGCTGTGGAGCTTAGGAGGAGATGGTTAGATGGTAAAACTCCTCTGACCATGACACATCTTAAAGCCATGCTCTTGGATATGGTTGTGGGTAGTACTGACACATCCGCCACCACAATTGAGTTTGCAATGGCTGAAATTATGAACAAACCAGTGGTGTTACAGAAAGCCCAGAAAGAATTAGACGTTGTAGTTGGGAAAGACAGTATTGTACAAGAGTCTCATATTCACAAACTACCATACTTGGATGCTGTGATGAAAGAAACTCTGCGCTTGCACCCAGCCCTGCCTGTATTAATTCCACATTGTCCAAGTGAAACATGCACTGTGGGAGGTTATACCATTCCAAAGGGGTCTAGGATTTTTGTTAATGTGTGGGATATCCATAGAGACTCTTCTAACTGGAAAAACCCATTAGAGTTTAATCCAGAGAGGTTCTTGAATGGTAAGTATGACTGCACTGGAAGTGACTTCAACTATTTTCCATTTGGGAGTGGAAAAAGAATATGTCCAGGGATAGCAACGGCAGAGAGGCTTGTCATGCATTTACTTGCATCACTGTTGCATTCTTTTGACTGGAAACTACCACAAGGAGAGACGAAGTTAGATGTTTCCGAGAAGTTTGGCCTTGTGATAAAGAAGAAGGTACCTATGGTTGCCATCCCAACTCCAAGGTTATTGGATTCAGAACTTTATCAGTAA

Protein Analysis

554

Amino Acids

61.09

Weight (kDa)

8.92

Isoelectric Point (pI)

39.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 115 - 324 2.4e-25 Cytochrome P450
p450 PF00067 333 - 536 2.8e-64 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000377)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 570
Acc36I ACCTGC 1 cut(s) 691
Acc65I GGTACC 2 cut(s) 461, 1609
AccB1I GGYRCC 3 cut(s) 461, 812, 1609
AccB7I CCANNNNNTGG 2 cut(s) 127, 371
AccBSI CCGCTC 1 cut(s) 237
AccI GTMKAC 1 cut(s) 750
AccII CGCG 4 cut(s) 14, 543, 644, 881
AclWI GGATC 1 cut(s) 40
AcoI YGGCCR 4 cut(s) 118, 423, 774, 849
AcyI GRCGYC 3 cut(s) 525, 546, 567
AfaI GTAC 5 cut(s) 463, 608, 1060, 1176, 1611
AfiI CCNNNNNNNGG 8 cut(s) 127, 219, 367, 371, 609, 700, 840, 858
AflIII ACRYGT 1 cut(s) 798
AgsI TTSAA 3 cut(s) 683, 1405, 1438
AjnI CCWGG 5 cut(s) 346, 420, 464, 919, 1474
Alw21I GWGCWC 1 cut(s) 402
Alw26I GTCTC 5 cut(s) 106, 889, 1188, 1347, 1553
AlwI GGATC 1 cut(s) 40
AlwNI CAGNNNCTG 1 cut(s) 471
Ama87I CYCGRG 3 cut(s) 395, 501, 732
ApeKI GCWGC 5 cut(s) 4, 58, 89, 278, 557
ArsI GACNNNNNNTTYG 4 cut(s) 136, 168, 515, 547
AseI ATTAAT 1 cut(s) 1259
Asp718I GGTACC 2 cut(s) 461, 1609
AspLEI GCGC 4 cut(s) 14, 644, 646, 1236
AspS9I GGNCC 9 cut(s) 350, 437, 508, 517, 611, 703, 741, 831, 928
AsuC2I CCSGG 2 cut(s) 835, 931
AsuHPI GGTGA 1 cut(s) 770
AvaI CYCGRG 3 cut(s) 395, 501, 732
AvaII GGWCC 5 cut(s) 350, 508, 517, 703, 741
BalI TGGCCA 3 cut(s) 120, 425, 776
BanI GGYRCC 3 cut(s) 461, 812, 1609
BanII GRGCYC 2 cut(s) 161, 402
Bbv12I GWGCWC 1 cut(s) 402
BbvI GCAGC 5 cut(s) 16, 45, 101, 265, 569
BccI CCATC 5 cut(s) 79, 503, 981, 989, 1631
BceAI ACGGC 4 cut(s) 322, 451, 595, 1503
BciT130I CCWGG 5 cut(s) 348, 422, 466, 921, 1476
BcnI CCSGG 2 cut(s) 835, 931
BcoDI GTCTC 5 cut(s) 106, 889, 1188, 1347, 1553
BfaI CTAG 3 cut(s) 63, 189, 1320
BfuAI ACCTGC 1 cut(s) 691
BglI GCCNNNNNGGC 1 cut(s) 619
BisI GCNGC 8 cut(s) 5, 41, 59, 90, 279, 335, 544, 558
BlpI GCTNAGC 1 cut(s) 656
BlsI GCNGC 8 cut(s) 6, 42, 60, 91, 280, 336, 545, 559
BmcAI AGTACT 1 cut(s) 1060
Bme1390I CCNGG 7 cut(s) 348, 422, 466, 835, 921, 931, 1476
Bme18I GGWCC 5 cut(s) 350, 508, 517, 703, 741
BmeT110I CYCGRG 3 cut(s) 395, 501, 732
BmgT120I GGNCC 9 cut(s) 350, 437, 508, 517, 611, 703, 741, 831, 928
BmiI GGNNCC 7 cut(s) 352, 463, 742, 743, 814, 832, 1611
BmrFI CCNGG 7 cut(s) 348, 422, 466, 835, 921, 931, 1476
BmrI ACTGGG 2 cut(s) 183, 467
BmsI GCATC 3 cut(s) 642, 1201, 1526
BmuI ACTGGG 2 cut(s) 183, 467
BplI GAGNNNNNCTC 4 cut(s) 389, 421, 495, 527
Bpu10I CCTNAGC 1 cut(s) 977
Bpu1102I GCTNAGC 1 cut(s) 656
BpuEI CTTGAG 2 cut(s) 497, 632
BpuMI CCSGG 2 cut(s) 835, 931
BsaHI GRCGYC 3 cut(s) 525, 546, 567
BsaI GGTCTC 1 cut(s) 889
BsaJI CCNNGG 6 cut(s) 355, 669, 816, 834, 1475, 1634
Bsc4I CCNNNNNNNGG 8 cut(s) 127, 219, 367, 371, 609, 700, 840, 858
Bse1I ACTGG 8 cut(s) 26, 178, 372, 462, 1115, 1370, 1429, 1544
Bse3DI GCAATG 2 cut(s) 873, 1098
BseBI CCWGG 5 cut(s) 348, 422, 466, 921, 1476
BseDI CCNNGG 6 cut(s) 355, 669, 816, 834, 1475, 1634
BseGI GGATG 3 cut(s) 1067, 1216, 1623
BseLI CCNNNNNNNGG 8 cut(s) 127, 219, 367, 371, 609, 700, 840, 858
BseMI GCAATG 2 cut(s) 873, 1098
BseNI ACTGG 8 cut(s) 26, 178, 372, 462, 1115, 1370, 1429, 1544
BsePI GCGCGC 1 cut(s) 642
BseRI GAGGAG 2 cut(s) 996, 997
BseXI GCAGC 5 cut(s) 16, 45, 101, 265, 569
BseYI CCCAGC 3 cut(s) 560, 839, 1243
BsgI GTGCAG 1 cut(s) 1405
Bsh1236I CGCG 4 cut(s) 14, 543, 644, 881
BshNI GGYRCC 3 cut(s) 461, 812, 1609
BsiHKAI GWGCWC 1 cut(s) 402
BsiHKCI CYCGRG 3 cut(s) 395, 501, 732
BsiSI CCGG 3 cut(s) 614, 834, 931
BsiWI CGTACG 1 cut(s) 606
BslFI GGGAC 6 cut(s) 157, 336, 370, 578, 727, 887
BslI CCNNNNNNNGG 8 cut(s) 127, 219, 367, 371, 609, 700, 840, 858
BsmAI GTCTC 5 cut(s) 106, 889, 1188, 1347, 1553
BsmBI CGTCTC 1 cut(s) 1553
BsmFI GGGAC 6 cut(s) 157, 336, 370, 578, 727, 887
BsmI GAATGC 1 cut(s) 1528
Bso31I GGTCTC 1 cut(s) 889
BsoBI CYCGRG 3 cut(s) 395, 501, 732
Bsp1286I GDGCHC 2 cut(s) 161, 402
Bsp1407I TGTACA 1 cut(s) 1174
Bsp143I GATC 1 cut(s) 32
Bsp1720I GCTNAGC 1 cut(s) 656
Bsp19I CCATGG 1 cut(s) 816
BspFNI CGCG 4 cut(s) 14, 543, 644, 881
BspLI GGNNCC 7 cut(s) 352, 463, 742, 743, 814, 832, 1611
BspMI ACCTGC 1 cut(s) 691
BspPI GGATC 1 cut(s) 40
BspQI GCTCTTC 1 cut(s) 227
BspT107I GGYRCC 3 cut(s) 461, 812, 1609
BspTNI GGTCTC 1 cut(s) 889
BsrBI CCGCTC 1 cut(s) 237
BsrDI GCAATG 2 cut(s) 873, 1098
BsrGI TGTACA 1 cut(s) 1174
BsrI ACTGG 8 cut(s) 26, 178, 372, 462, 1115, 1370, 1429, 1544
BssECI CCNNGG 6 cut(s) 355, 669, 816, 834, 1475, 1634
BssHII GCGCGC 1 cut(s) 642
BssMI GATC 1 cut(s) 32
BssNI GRCGYC 3 cut(s) 525, 546, 567
BssT1I CCWWGG 3 cut(s) 669, 816, 1634
Bst2UI CCWGG 5 cut(s) 348, 422, 466, 921, 1476
Bst4CI ACNGT 6 cut(s) 72, 79, 219, 1169, 1291, 1524
Bst6I CTCTTC 2 cut(s) 227, 1363
BstACI GRCGYC 3 cut(s) 525, 546, 567
BstAPI GCANNNNNTGC 1 cut(s) 275
BstAUI TGTACA 1 cut(s) 1174
BstC8I GCNNGC 4 cut(s) 118, 418, 644, 1238
BstDEI CTNAG 2 cut(s) 656, 977
BstDSI CCRYGG 2 cut(s) 355, 816
BstEII GGTNACC 1 cut(s) 374
BstF5I GGATG 3 cut(s) 1067, 1216, 1623
BstFNI CGCG 4 cut(s) 14, 543, 644, 881
BstHHI GCGC 4 cut(s) 14, 644, 646, 1236
BstKTI GATC 1 cut(s) 35
BstMAI GTCTC 5 cut(s) 106, 889, 1188, 1347, 1553
BstMBI GATC 1 cut(s) 32
BstMWI GCNNNNNNNGC 9 cut(s) 122, 275, 340, 422, 533, 619, 652, 697, 1504
BstNI CCWGG 5 cut(s) 348, 422, 466, 921, 1476
BstNSI RCATGY 2 cut(s) 802, 1287
BstPI GGTNACC 1 cut(s) 374
BstSCI CCNGG 7 cut(s) 346, 420, 464, 833, 919, 929, 1474
BstUI CGCG 4 cut(s) 14, 543, 644, 881
BstV1I GCAGC 5 cut(s) 16, 45, 101, 265, 569
BstXI CCANNNNNNTGG 1 cut(s) 1039
BtgI CCRYGG 2 cut(s) 355, 816
BtgZI GCGATG 2 cut(s) 481, 862
BtsCI GGATG 3 cut(s) 1067, 1216, 1623
BtsI GCAGTG 1 cut(s) 663
BtsIMutI CAGTG 7 cut(s) 215, 365, 663, 1122, 1287, 1422, 1520
BveI ACCTGC 1 cut(s) 691
Cac8I GCNNGC 4 cut(s) 118, 418, 644, 1238
CaiI CAGNNNCTG 1 cut(s) 471
CfoI GCGC 4 cut(s) 14, 644, 646, 1236
Cfr13I GGNCC 9 cut(s) 350, 437, 508, 517, 611, 703, 741, 831, 928
CseI GACGC 2 cut(s) 533, 535
Csp6I GTAC 5 cut(s) 462, 607, 1059, 1175, 1610
CspCI CAANNNNNGTGG 2 cut(s) 1063, 1098
CviQI GTAC 5 cut(s) 462, 607, 1059, 1175, 1610
DdeI CTNAG 2 cut(s) 656, 977
DpnI GATC 1 cut(s) 34
DpnII GATC 1 cut(s) 32
EaeI YGGCCR 4 cut(s) 118, 423, 774, 849
Eam1104I CTCTTC 2 cut(s) 227, 1363
EarI CTCTTC 2 cut(s) 227, 1363
EciI GGCGGA 1 cut(s) 1060
Ecl136II GAGCTC 1 cut(s) 400
Eco130I CCWWGG 3 cut(s) 669, 816, 1634
Eco24I GRGCYC 2 cut(s) 161, 402
Eco31I GGTCTC 1 cut(s) 889
Eco32I GATATC 1 cut(s) 1345
Eco47I GGWCC 5 cut(s) 350, 508, 517, 703, 741
Eco53kI GAGCTC 1 cut(s) 400
Eco88I CYCGRG 3 cut(s) 395, 501, 732
Eco91I GGTNACC 1 cut(s) 374
EcoICRI GAGCTC 1 cut(s) 400
EcoO109I RGGNCCY 2 cut(s) 508, 741
EcoO65I GGTNACC 1 cut(s) 374
EcoRII CCWGG 5 cut(s) 346, 420, 464, 919, 1474
EcoRV GATATC 1 cut(s) 1345
EcoT14I CCWWGG 3 cut(s) 669, 816, 1634
EcoT22I ATGCAT 1 cut(s) 1509
EcoT38I GRGCYC 2 cut(s) 161, 402
ErhI CCWWGG 3 cut(s) 669, 816, 1634
Esp3I CGTCTC 1 cut(s) 1553
FaqI GGGAC 6 cut(s) 157, 336, 370, 578, 727, 887
FauI CCCGC 4 cut(s) 36, 230, 575, 864
FblI GTMKAC 1 cut(s) 750
Fnu4HI GCNGC 8 cut(s) 5, 41, 59, 90, 279, 335, 544, 558
FokI GGATG 3 cut(s) 1054, 1223, 1610
FriOI GRGCYC 2 cut(s) 161, 402
Fsp4HI GCNGC 8 cut(s) 5, 41, 59, 90, 279, 335, 544, 558
FspBI CTAG 3 cut(s) 63, 189, 1320
GlaI GCGC 4 cut(s) 13, 643, 645, 1235
GluI GCNGC 8 cut(s) 5, 41, 59, 90, 279, 335, 544, 558
GsaI CCCAGC 3 cut(s) 564, 843, 1247
HapII CCGG 3 cut(s) 614, 834, 931
HgaI GACGC 2 cut(s) 533, 535
HhaI GCGC 4 cut(s) 14, 644, 646, 1236
Hin1I GRCGYC 3 cut(s) 525, 546, 567
Hin6I GCGC 4 cut(s) 12, 642, 644, 1234
HinP1I GCGC 4 cut(s) 12, 642, 644, 1234
HincII GTYRAC 1 cut(s) 751
HindII GTYRAC 1 cut(s) 751
HindIII AAGCTT 1 cut(s) 449
HinfI GANTC 5 cut(s) 311, 674, 1181, 1355, 1646
HpaII CCGG 3 cut(s) 614, 834, 931
HphI GGTGA 1 cut(s) 770
Hpy166II GTNNAC 2 cut(s) 75, 751
Hpy188I TCNGA 6 cut(s) 226, 707, 910, 1011, 1579, 1651
Hpy188III TCNNGA 5 cut(s) 503, 649, 683, 1391, 1402
Hpy8I GTNNAC 2 cut(s) 75, 751
Hpy99I CGWCG 4 cut(s) 19, 572, 752, 755
HpyAV CCTTC 4 cut(s) 389, 501, 958, 1600
HpyCH4III ACNGT 6 cut(s) 72, 79, 219, 1169, 1291, 1524
HpyCH4IV ACGT 3 cut(s) 567, 753, 1149
HpyF10VI GCNNNNNNNGC 9 cut(s) 122, 275, 340, 422, 533, 619, 652, 697, 1504
HpyF3I CTNAG 2 cut(s) 656, 977
HpySE526I ACGT 3 cut(s) 567, 753, 1149
Hsp92I GRCGYC 3 cut(s) 525, 546, 567
HspAI GCGC 4 cut(s) 12, 642, 644, 1234
KflI GGGWCCC 1 cut(s) 741
KpnI GGTACC 2 cut(s) 465, 1613
Kzo9I GATC 1 cut(s) 32
LguI GCTCTTC 1 cut(s) 227
LmnI GCTCC 5 cut(s) 405, 820, 883, 910, 973
Lsp1109I GCAGC 5 cut(s) 16, 45, 101, 265, 569
LweI GCATC 3 cut(s) 642, 1201, 1526
MaeI CTAG 3 cut(s) 63, 189, 1320
MaeII ACGT 3 cut(s) 567, 753, 1149
MaeIII GTNAC 4 cut(s) 374, 719, 1122, 1430
MalI GATC 1 cut(s) 34
MbiI CCGCTC 1 cut(s) 237
MboI GATC 1 cut(s) 32
MboII GAAGA 4 cut(s) 244, 247, 1350, 1615
MfeI CAATTG 1 cut(s) 1080
MhlI GDGCHC 2 cut(s) 161, 402
MlsI TGGCCA 3 cut(s) 120, 425, 776
MluCI AATT 6 cut(s) 166, 270, 1080, 1101, 1142, 1260
MluNI TGGCCA 3 cut(s) 120, 425, 776
MlyI GAGTC 3 cut(s) 668, 1190, 1349
MmeI TCCRAC 1 cut(s) 204
Mox20I TGGCCA 3 cut(s) 120, 425, 776
Mph1103I ATGCAT 1 cut(s) 1509
MscI TGGCCA 3 cut(s) 120, 425, 776
MseI TTAA 6 cut(s) 165, 447, 1026, 1259, 1332, 1386
MslI CAYNNNNRTG 1 cut(s) 797
Msp20I TGGCCA 3 cut(s) 120, 425, 776
MspA1I CMGCKG 3 cut(s) 92, 116, 560
MspI CCGG 3 cut(s) 614, 834, 931
MspR9I CCNGG 7 cut(s) 348, 422, 466, 835, 921, 931, 1476
MunI CAATTG 1 cut(s) 1080
Mva1269I GAATGC 1 cut(s) 1528
MvaI CCWGG 5 cut(s) 348, 422, 466, 921, 1476
MvnI CGCG 4 cut(s) 14, 543, 644, 881
MwoI GCNNNNNNNGC 9 cut(s) 122, 275, 340, 422, 533, 619, 652, 697, 1504
NciI CCSGG 2 cut(s) 835, 931
NcoI CCATGG 1 cut(s) 816
NdeII GATC 1 cut(s) 32
NlaIV GGNNCC 7 cut(s) 352, 463, 742, 743, 814, 832, 1611
NmeAIII GCCGAG 2 cut(s) 245, 877
NmuCI GTSAC 1 cut(s) 1430
NsiI ATGCAT 1 cut(s) 1509
NspI RCATGY 2 cut(s) 802, 1287
PaeR7I CTCGAG 1 cut(s) 501
PauI GCGCGC 1 cut(s) 642
PciI ACATGT 1 cut(s) 798
PciSI GCTCTTC 1 cut(s) 227
PcsI WCGNNNNNNNCGW 1 cut(s) 744
PctI GAATGC 1 cut(s) 1528
PfeI GAWTC 2 cut(s) 311, 1646
Pfl23II CGTACG 1 cut(s) 606
PflMI CCANNNNNTGG 2 cut(s) 127, 371
PkrI GCNGC 8 cut(s) 6, 42, 60, 91, 280, 336, 545, 559
PleI GAGTC 3 cut(s) 668, 1189, 1349
PpsI GAGTC 3 cut(s) 668, 1189, 1349
PpuMI RGGWCCY 2 cut(s) 508, 741
PscI ACATGT 1 cut(s) 798
PshBI ATTAAT 1 cut(s) 1259
Psp124BI GAGCTC 1 cut(s) 402
Psp5II RGGWCCY 2 cut(s) 508, 741
Psp6I CCWGG 5 cut(s) 346, 420, 464, 919, 1474
PspEI GGTNACC 1 cut(s) 374
PspFI CCCAGC 3 cut(s) 560, 839, 1243
PspGI CCWGG 5 cut(s) 346, 420, 464, 919, 1474
PspLI CGTACG 1 cut(s) 606
PspN4I GGNNCC 7 cut(s) 352, 463, 742, 743, 814, 832, 1611
PspPI GGNCC 9 cut(s) 350, 437, 508, 517, 611, 703, 741, 831, 928
PspPPI RGGWCCY 2 cut(s) 508, 741
PstNI CAGNNNCTG 1 cut(s) 471
PteI GCGCGC 1 cut(s) 642
PvuII CAGCTG 3 cut(s) 92, 116, 560
RsaI GTAC 5 cut(s) 463, 608, 1060, 1176, 1611
RsaNI GTAC 5 cut(s) 462, 607, 1059, 1175, 1610
RseI CAYNNNNRTG 1 cut(s) 797
SacI GAGCTC 1 cut(s) 402
SalI GTCGAC 1 cut(s) 749
SapI GCTCTTC 1 cut(s) 227
SaqAI TTAA 6 cut(s) 165, 447, 1026, 1259, 1332, 1386
SatI GCNGC 8 cut(s) 5, 41, 59, 90, 279, 335, 544, 558
Sau3AI GATC 1 cut(s) 32
Sau96I GGNCC 9 cut(s) 350, 437, 508, 517, 611, 703, 741, 831, 928
ScaI AGTACT 1 cut(s) 1060
SchI GAGTC 3 cut(s) 668, 1190, 1349
ScrFI CCNGG 7 cut(s) 348, 422, 466, 835, 921, 931, 1476
SduI GDGCHC 2 cut(s) 161, 402
SfaNI GCATC 3 cut(s) 642, 1201, 1526
Sfr274I CTCGAG 1 cut(s) 501
SgrDI CGTCGACG 1 cut(s) 749
SinI GGWCC 5 cut(s) 350, 508, 517, 703, 741
SlaI CTCGAG 1 cut(s) 501
SmiMI CAYNNNNRTG 1 cut(s) 797
SmlI CTYRAG 3 cut(s) 501, 512, 647
SmoI CTYRAG 3 cut(s) 501, 512, 647
Sse9I AATT 6 cut(s) 166, 270, 1080, 1101, 1142, 1260
SspI AATATT 1 cut(s) 904
SspMI CTAG 3 cut(s) 63, 189, 1320
SstI GAGCTC 1 cut(s) 402
StyD4I CCNGG 7 cut(s) 346, 420, 464, 833, 919, 929, 1474
StyI CCWWGG 3 cut(s) 669, 816, 1634
TaaI ACNGT 6 cut(s) 72, 79, 219, 1169, 1291, 1524
TaiI ACGT 3 cut(s) 570, 756, 1152
TaqI TCGA 4 cut(s) 390, 454, 502, 750
TasI AATT 6 cut(s) 166, 270, 1080, 1101, 1142, 1260
TatI WGTACW 2 cut(s) 1058, 1174
TauI GCSGC 3 cut(s) 43, 337, 546
TfiI GAWTC 2 cut(s) 311, 1646
Tru1I TTAA 6 cut(s) 165, 447, 1026, 1259, 1332, 1386
Tru9I TTAA 6 cut(s) 165, 447, 1026, 1259, 1332, 1386
TscAI CASTG 7 cut(s) 222, 372, 670, 1122, 1294, 1429, 1527
TseFI GTSAC 1 cut(s) 1430
TseI GCWGC 5 cut(s) 4, 58, 89, 278, 557
Tsp45I GTSAC 1 cut(s) 1430
TspDTI ATGAA 3 cut(s) 977, 1121, 1235
TspGWI ACGGA 1 cut(s) 32
TspRI CASTG 7 cut(s) 222, 372, 670, 1122, 1294, 1429, 1527
Van91I CCANNNNNTGG 2 cut(s) 127, 371
VpaK11BI GGWCC 5 cut(s) 350, 508, 517, 703, 741
VspI ATTAAT 1 cut(s) 1259
XceI RCATGY 2 cut(s) 802, 1287
XhoI CTCGAG 1 cut(s) 501
XmiI GTMKAC 1 cut(s) 750
XspI CTAG 3 cut(s) 63, 189, 1320
ZraI GACGTC 1 cut(s) 568
ZrmI AGTACT 1 cut(s) 1060
Zsp2I ATGCAT 1 cut(s) 1509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.