Prupe.5G077900_v2.0.a1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000377
Physical Location & Seq
Forward (+)
9172309 .. 9172641
333 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G077900.1

Sequence Viewer

Length: 333 bp
ATGCGTACGTGGGCAATACACCGGGACCCTTCCATTTGGGAAAATCCATTGGAGTTTGATCCAGAAAGGTTCTTGAACAGCAAATGGGACTATAGTGGAAATGACTTCAACTATTTCCCATTTGGATTTAGCAGAAGAATATGTGCAGGGATTGCAATGGCTGAGAGGATGGTGATGCATTCACTTGCTACACTTGTGCACTCTTTTGACTGGAAAATGCCACAAGGACAGAAGCTGGATCTTTCAGAGAAGTTTGGAGTTGTGCTGAAAAAGAAGCTGCCTTTGGTTGCTATCCCAACTCCTAGGTTATCTGATCCAGCACTCTATGAGTAG

Protein Analysis

111

Amino Acids

12.85

Weight (kDa)

7.9

Isoelectric Point (pI)

37.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000377)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 53, 246, 308
AfaI GTAC 1 cut(s) 7
AgsI TTSAA 2 cut(s) 76, 109
AjuI GAANNNNNNNTTGG 2 cut(s) 266, 298
AluBI AGCT 2 cut(s) 235, 277
AluI AGCT 2 cut(s) 235, 277
Alw21I GWGCWC 1 cut(s) 201
Alw44I GTGCAC 1 cut(s) 197
AlwI GGATC 3 cut(s) 53, 246, 308
AlwNI CAGNNNCTG 1 cut(s) 235
ApaLI GTGCAC 1 cut(s) 197
ApeKI GCWGC 1 cut(s) 277
AspA2I CCTAGG 1 cut(s) 302
AspS9I GGNCC 1 cut(s) 25
AsuC2I CCSGG 1 cut(s) 23
AsuHPI GGTGA 1 cut(s) 184
AvaII GGWCC 1 cut(s) 25
AvrII CCTAGG 1 cut(s) 302
BaeGI GKGCMC 1 cut(s) 201
Bbv12I GWGCWC 1 cut(s) 201
BbvI GCAGC 1 cut(s) 264
BccI CCATC 1 cut(s) 163
BcnI CCSGG 1 cut(s) 23
BfaI CTAG 1 cut(s) 303
BfmI CTRYAG 1 cut(s) 91
BisI GCNGC 1 cut(s) 278
BlnI CCTAGG 1 cut(s) 302
BlsI GCNGC 1 cut(s) 279
Bme1390I CCNGG 1 cut(s) 23
Bme18I GGWCC 1 cut(s) 25
BmgT120I GGNCC 1 cut(s) 25
BmiI GGNNCC 2 cut(s) 26, 27
BmrFI CCNGG 1 cut(s) 23
BmsI GCATC 1 cut(s) 165
BpuMI CCSGG 1 cut(s) 23
BsaAI YACGTR 1 cut(s) 9
BsaJI CCNNGG 1 cut(s) 302
Bse1I ACTGG 1 cut(s) 215
Bse3DI GCAATG 1 cut(s) 162
BseDI CCNNGG 1 cut(s) 302
BseGI GGATG 1 cut(s) 174
BseMI GCAATG 1 cut(s) 162
BseMII CTCAG 1 cut(s) 153
BseNI ACTGG 1 cut(s) 215
BseSI GKGCMC 1 cut(s) 201
BseXI GCAGC 1 cut(s) 264
BsgI GTGCAG 1 cut(s) 165
BsiHKAI GWGCWC 1 cut(s) 201
BsiSI CCGG 1 cut(s) 22
BsiWI CGTACG 1 cut(s) 5
BslFI GGGAC 2 cut(s) 38, 101
BsmFI GGGAC 2 cut(s) 38, 101
BsmI GAATGC 1 cut(s) 178
Bsp1286I GDGCHC 1 cut(s) 201
Bsp143I GATC 3 cut(s) 58, 238, 313
BspCNI CTCAG 1 cut(s) 154
BspLI GGNNCC 2 cut(s) 26, 27
BspPI GGATC 3 cut(s) 53, 246, 308
BsrDI GCAATG 1 cut(s) 162
BsrI ACTGG 1 cut(s) 215
BssECI CCNNGG 1 cut(s) 302
BssMI GATC 3 cut(s) 58, 238, 313
BssT1I CCWWGG 1 cut(s) 302
BstAPI GCANNNNNTGC 1 cut(s) 152
BstBAI YACGTR 1 cut(s) 9
BstDEI CTNAG 1 cut(s) 162
BstF5I GGATG 1 cut(s) 174
BstKTI GATC 3 cut(s) 61, 241, 316
BstMBI GATC 3 cut(s) 58, 238, 313
BstMWI GCNNNNNNNGC 1 cut(s) 152
BstSCI CCNGG 1 cut(s) 21
BstSFI CTRYAG 1 cut(s) 91
BstSLI GKGCMC 1 cut(s) 201
BstV1I GCAGC 1 cut(s) 264
BstX2I RGATCY 1 cut(s) 238
BstYI RGATCY 1 cut(s) 238
BtsCI GGATG 1 cut(s) 174
CaiI CAGNNNCTG 1 cut(s) 235
Cfr13I GGNCC 1 cut(s) 25
Csp6I GTAC 1 cut(s) 6
CviJI RGCY 3 cut(s) 161, 235, 277
CviKI_1 RGCY 3 cut(s) 161, 235, 277
CviQI GTAC 1 cut(s) 6
DdeI CTNAG 1 cut(s) 162
DpnI GATC 3 cut(s) 60, 240, 315
DpnII GATC 3 cut(s) 58, 238, 313
Eco130I CCWWGG 1 cut(s) 302
Eco47I GGWCC 1 cut(s) 25
EcoO109I RGGNCCY 1 cut(s) 25
EcoT14I CCWWGG 1 cut(s) 302
EcoT22I ATGCAT 1 cut(s) 180
ErhI CCWWGG 1 cut(s) 302
FaiI YATR 3 cut(s) 93, 142, 327
FaqI GGGAC 2 cut(s) 38, 101
Fnu4HI GCNGC 1 cut(s) 278
FokI GGATG 1 cut(s) 181
Fsp4HI GCNGC 1 cut(s) 278
FspBI CTAG 1 cut(s) 303
GluI GCNGC 1 cut(s) 278
HapII CCGG 1 cut(s) 22
HpaII CCGG 1 cut(s) 22
HphI GGTGA 1 cut(s) 184
Hpy166II GTNNAC 1 cut(s) 199
Hpy188I TCNGA 2 cut(s) 247, 313
Hpy188III TCNNGA 2 cut(s) 62, 73
Hpy8I GTNNAC 1 cut(s) 199
HpyAV CCTTC 1 cut(s) 39
HpyCH4IV ACGT 1 cut(s) 8
HpyCH4V TGCA 4 cut(s) 146, 155, 178, 199
HpyF10VI GCNNNNNNNGC 1 cut(s) 152
HpyF3I CTNAG 1 cut(s) 162
HpySE526I ACGT 1 cut(s) 8
KflI GGGWCCC 1 cut(s) 25
Kzo9I GATC 3 cut(s) 58, 238, 313
LpnPI CCDG 5 cut(s) 35, 75, 132, 196, 221
Lsp1109I GCAGC 1 cut(s) 264
LweI GCATC 1 cut(s) 165
MaeI CTAG 1 cut(s) 303
MaeII ACGT 1 cut(s) 8
MalI GATC 3 cut(s) 60, 240, 315
MboI GATC 3 cut(s) 58, 238, 313
MboII GAAGA 1 cut(s) 147
MflI RGATCY 1 cut(s) 238
MhlI GDGCHC 1 cut(s) 201
MnlI CCTC 1 cut(s) 159
Mph1103I ATGCAT 1 cut(s) 180
MspI CCGG 1 cut(s) 22
MspR9I CCNGG 1 cut(s) 23
Mva1269I GAATGC 1 cut(s) 178
MwoI GCNNNNNNNGC 1 cut(s) 152
NciI CCSGG 1 cut(s) 23
NdeII GATC 3 cut(s) 58, 238, 313
NlaIV GGNNCC 2 cut(s) 26, 27
NsiI ATGCAT 1 cut(s) 180
PctI GAATGC 1 cut(s) 178
Pfl23II CGTACG 1 cut(s) 5
PkrI GCNGC 1 cut(s) 279
Ppu21I YACGTR 1 cut(s) 9
PpuMI RGGWCCY 1 cut(s) 25
Psp5II RGGWCCY 1 cut(s) 25
PspLI CGTACG 1 cut(s) 5
PspN4I GGNNCC 2 cut(s) 26, 27
PspPI GGNCC 1 cut(s) 25
PspPPI RGGWCCY 1 cut(s) 25
PstNI CAGNNNCTG 1 cut(s) 235
PsuI RGATCY 1 cut(s) 238
RsaI GTAC 1 cut(s) 7
RsaNI GTAC 1 cut(s) 6
SatI GCNGC 1 cut(s) 278
Sau3AI GATC 3 cut(s) 58, 238, 313
Sau96I GGNCC 1 cut(s) 25
ScrFI CCNGG 1 cut(s) 23
SduI GDGCHC 1 cut(s) 201
SetI ASST 5 cut(s) 11, 71, 237, 279, 308
SfaNI GCATC 1 cut(s) 165
SfcI CTRYAG 1 cut(s) 91
SinI GGWCC 1 cut(s) 25
SspMI CTAG 1 cut(s) 303
StyD4I CCNGG 1 cut(s) 21
StyI CCWWGG 1 cut(s) 302
TaiI ACGT 1 cut(s) 11
TseI GCWGC 1 cut(s) 277
VneI GTGCAC 1 cut(s) 197
VpaK11BI GGWCC 1 cut(s) 25
XmaJI CCTAGG 1 cut(s) 302
XspI CTAG 1 cut(s) 303
Zsp2I ATGCAT 1 cut(s) 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.