Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0000377

Physical Location & Seq

Genomic Coordinates Forward (+)

51009397 .. 51013997

Gene Structure 4601 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003636

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGCCACACTCGTATGAATTCTTCATGGAATCCAGTTCCTTATCCTCACTGTGGTCGGAAACCAACAGCGGGAGTTGGGGAGTGTTCTTCACTCTCTCGGCAATTTTTGCTGCATTTTTTTACGCATGGAGTTCCCTGAGAGAATCCAAGAGTAGCAGAATGTCGCCGCCATTGCCTCCTGGTCCCCGTGGCCTCCCACTGGTTGGTAACCTTCTGTCCCTTGACCCCGAGCTCCACTCCTACTTTGCTGGCCTAGCCAAAACCTACGGCCCAATCTTTAAGCTCCGACTGGGTACCAGGCTCTGCGTTGTAATAGCCTCCCCTTCCATCGCTCGAGAGGTCCTCAAGGACCATGACGCCACGTTCGCCAATCGCGGCGTCAATGTTGCAGCTGGGGACGTCGCACTCTACGGCGGGGCAGATATAGTTTTTGCCCCGTACGGGCCGGAGTGGCGAATGATGAGGAAAGTGTGCGCGCTCAAGATGCTTAGCAACACCGCCTTGGACTCGGTTCAAGAACTGCGCCACAAGCAGGTGCGAAAAGCTGTGGGTTACTTCTATACTCGGGTCGGGTCCCCCGTCGACGTTGGTGAGCAACTTTTCGTGGCCATTCTCAATCTTACCACCAACATGTTATGGGGTGGCACCATGGAGCAGGAGGGGGCCGGGGCTGGGGTTTTGGCCGAGTTTAGGGAAGCAATGCGGGACATCGCGGAGCTTTCTGGGAAACCCAACATTTCGGAGCTTTATCCAGGTTTGGCCCGGTTTGATTTGCAAGGCATAGCGAAGCAGATGAAGGCTGTGGAGCTTAGGTTTGATAGGATTTTTGAGAAAGTTATCAATCAAAGGTTGACGATGCAGAAAGAAGGCGCGAAAGAGAGCAATGATTTCTTGACATTTCTATTGCGATCTATAGATGAAGGAGGAGATGGTAAAACTCCTCTGACCATGACACATCTCAAAGCCATGCTCTTGGATATGGTTGTGGGTAGTACTGACACATCCGCCACCACAATTGAGTTTGCAATGGCTGAAATTATGAACAAACCAGTGGTGTTACAGAAAGCCCAGAAAGAACTAGACGTTGTAGTTGGGAAAGACAGTATTGTACAAGAGTCTCATATTCACAAACTACCATACTTGGATGCTGTGATGAAAGAAACTCTGCGCTTGCACCCAGCCCTGCCTGTATTAATCCCACATTGCCCAAGTGAAACATGCACTGTGGGAGGTTATACCATTCCAAAGGGGTCTAGGATTTTTGTTAATGTGTGGGATATCCATAGAGACTCTTCTAACTGGAAAAACCCATTAGAGTTTAATCCAGAGAGGTTCTTGAATGGTAAATATGACTACACTGGAAGTGACTTCAACTATTTTCCATTTGGGAGTGGAAAAAGAATATGTCCAGGGATAGCAACGGCAGAGAGGCTTGTCATGCATTTACTTGCATCACTGTTGCATTCTTTTGACTGGAAAGTACCACAAGGAGAGACGAAGTTAGATGTTTCCGAGAAGTTCGGCCTTGTGATGAAGAAGAAGGTACCTATGGTTGCCATCCCAACTCCAAGGTTATTGGATTTAGAACTTTATCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0016020 GO:0019748 GO:0042221 GO:0044550 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934

Pfam Domains

Protein Families

p450

Protein Analysis

533

Amino Acids

59.17

Weight (kDa)

7.67

Isoelectric Point (pI)

37.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	59 - 515	2.5e-102	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca	FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica	MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica	Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis	pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis	RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata	RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora	Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii	Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa	Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha	Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana	Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	523
AatII	GACGTC	1 cut(s)	402
Acc36I	ACCTGC	1 cut(s)	523
Acc65I	GGTACC	2 cut(s)	293, 1543
AccB1I	GGYRCC	3 cut(s)	293, 644, 1543
AccB7I	CCANNNNNTGG	1 cut(s)	203
AccI	GTMKAC	1 cut(s)	582
AccII	CGCG	4 cut(s)	375, 476, 713, 872
AciI	CCGC	8 cut(s)	69, 167, 375, 414, 498, 703, 713, 1005
AcoI	YGGCCR	2 cut(s)	606, 681
AcsI	RAATTY	1 cut(s)	17
AcyI	GRCGYC	3 cut(s)	357, 378, 399
AfaI	GTAC	6 cut(s)	295, 440, 994, 1110, 1482, 1545
AfiI	CCNNNNNNNGG	8 cut(s)	51, 69, 199, 203, 441, 532, 672, 690
AflIII	ACRYGT	1 cut(s)	630
AgsI	TTSAA	3 cut(s)	515, 1339, 1372
AjnI	CCWGG	4 cut(s)	178, 296, 751, 1408
AluBI	AGCT	7 cut(s)	232, 283, 392, 545, 718, 745, 808
AluI	AGCT	7 cut(s)	232, 283, 392, 545, 718, 745, 808
Alw21I	GWGCWC	1 cut(s)	234
Alw26I	GTCTC	3 cut(s)	1122, 1281, 1487
AlwNI	CAGNNNCTG	1 cut(s)	303
Ama87I	CYCGRG	3 cut(s)	227, 333, 564
AoxI	GGCC	9 cut(s)	190, 250, 268, 443, 606, 663, 681, 759, 1522
ApeKI	GCWGC	2 cut(s)	110, 389
ApoI	RAATTY	1 cut(s)	17
ArsI	GACNNNNNNTTYG	2 cut(s)	347, 379
AseI	ATTAAT	1 cut(s)	1193
Asp718I	GGTACC	2 cut(s)	293, 1543
AspLEI	GCGC	5 cut(s)	476, 478, 525, 872, 1170
AspS9I	GGNCC	8 cut(s)	182, 269, 340, 349, 443, 573, 663, 760
AsuC2I	CCSGG	2 cut(s)	667, 763
AsuHPI	GGTGA	1 cut(s)	602
AvaI	CYCGRG	3 cut(s)	227, 333, 564
AvaII	GGWCC	4 cut(s)	182, 340, 349, 573
BalI	TGGCCA	1 cut(s)	608
BanI	GGYRCC	3 cut(s)	293, 644, 1543
BanII	GRGCYC	1 cut(s)	234
BarI	GAAGNNNNNNTAC	1 cut(s)	37
Bbv12I	GWGCWC	1 cut(s)	234
BbvI	GCAGC	2 cut(s)	97, 401
BccI	CCATC	3 cut(s)	335, 923, 1565
BceAI	ACGGC	3 cut(s)	283, 427, 1437
BciT130I	CCWGG	4 cut(s)	180, 298, 753, 1410
BcnI	CCSGG	2 cut(s)	667, 763
BcoDI	GTCTC	3 cut(s)	1122, 1281, 1487
BfaI	CTAG	3 cut(s)	254, 1079, 1254
BfmI	CTRYAG	1 cut(s)	912
BfuAI	ACCTGC	1 cut(s)	523
BglI	GCCNNNNNGGC	1 cut(s)	451
BisI	GCNGC	4 cut(s)	111, 167, 376, 390
BlpI	GCTNAGC	1 cut(s)	488
BlsI	GCNGC	4 cut(s)	112, 168, 377, 391
BmcAI	AGTACT	1 cut(s)	994
Bme1390I	CCNGG	6 cut(s)	180, 298, 667, 753, 763, 1410
Bme18I	GGWCC	4 cut(s)	182, 340, 349, 573
BmeT110I	CYCGRG	3 cut(s)	227, 333, 564
BmgT120I	GGNCC	8 cut(s)	182, 269, 340, 349, 443, 573, 663, 760
BmiI	GGNNCC	7 cut(s)	184, 295, 574, 575, 646, 664, 1545
BmrFI	CCNGG	6 cut(s)	180, 298, 667, 753, 763, 1410
BmrI	ACTGGG	1 cut(s)	299
BmsI	GCATC	4 cut(s)	474, 846, 1135, 1460
BmuI	ACTGGG	1 cut(s)	299
BplI	GAGNNNNNCTC	4 cut(s)	221, 253, 327, 359
Bpu10I	CCTNAGC	1 cut(s)	809
Bpu1102I	GCTNAGC	1 cut(s)	488
BpuEI	CTTGAG	2 cut(s)	329, 464
BpuMI	CCSGG	2 cut(s)	667, 763
BsaHI	GRCGYC	3 cut(s)	357, 378, 399
BsaJI	CCNNGG	6 cut(s)	187, 501, 648, 666, 1409, 1568
BsaXI	ACNNNNNCTCC	2 cut(s)	797, 827
Bsc4I	CCNNNNNNNGG	8 cut(s)	51, 69, 199, 203, 441, 532, 672, 690
Bse1I	ACTGG	7 cut(s)	33, 204, 294, 1049, 1304, 1363, 1478
Bse3DI	GCAATG	5 cut(s)	170, 705, 889, 1032, 1201
BseBI	CCWGG	4 cut(s)	180, 298, 753, 1410
BseDI	CCNNGG	6 cut(s)	187, 501, 648, 666, 1409, 1568
BseGI	GGATG	3 cut(s)	1001, 1150, 1557
BseLI	CCNNNNNNNGG	8 cut(s)	51, 69, 199, 203, 441, 532, 672, 690
BseMI	GCAATG	5 cut(s)	170, 705, 889, 1032, 1201
BseMII	CTCAG	1 cut(s)	128
BseNI	ACTGG	7 cut(s)	33, 204, 294, 1049, 1304, 1363, 1478
BsePI	GCGCGC	1 cut(s)	474
BseRI	GAGGAG	2 cut(s)	930, 939
BseXI	GCAGC	2 cut(s)	97, 401
BseYI	CCCAGC	3 cut(s)	392, 671, 1177
Bsh1236I	CGCG	4 cut(s)	375, 476, 713, 872
BshFI	GGCC	9 cut(s)	192, 252, 270, 445, 608, 665, 683, 761, 1524
BshNI	GGYRCC	3 cut(s)	293, 644, 1543
BsiHKAI	GWGCWC	1 cut(s)	234
BsiHKCI	CYCGRG	3 cut(s)	227, 333, 564
BsiSI	CCGG	3 cut(s)	446, 666, 763
BsiWI	CGTACG	1 cut(s)	438
BslFI	GGGAC	5 cut(s)	168, 202, 410, 559, 719
BslI	CCNNNNNNNGG	8 cut(s)	51, 69, 199, 203, 441, 532, 672, 690
BsmAI	GTCTC	3 cut(s)	1122, 1281, 1487
BsmBI	CGTCTC	1 cut(s)	1487
BsmFI	GGGAC	5 cut(s)	168, 202, 410, 559, 719
BsmI	GAATGC	1 cut(s)	1462
BsnI	GGCC	9 cut(s)	192, 252, 270, 445, 608, 665, 683, 761, 1524
BsoBI	CYCGRG	3 cut(s)	227, 333, 564
Bsp1286I	GDGCHC	1 cut(s)	234
Bsp1407I	TGTACA	1 cut(s)	1108
Bsp143I	GATC	1 cut(s)	908
Bsp1720I	GCTNAGC	1 cut(s)	488
Bsp19I	CCATGG	1 cut(s)	648
BspACI	CCGC	8 cut(s)	69, 167, 375, 414, 498, 703, 713, 1005
BspANI	GGCC	9 cut(s)	192, 252, 270, 445, 608, 665, 683, 761, 1524
BspCNI	CTCAG	1 cut(s)	129
BspFNI	CGCG	4 cut(s)	375, 476, 713, 872
BspLI	GGNNCC	7 cut(s)	184, 295, 574, 575, 646, 664, 1545
BspMI	ACCTGC	1 cut(s)	523
BspT107I	GGYRCC	3 cut(s)	293, 644, 1543
BsrDI	GCAATG	5 cut(s)	170, 705, 889, 1032, 1201
BsrGI	TGTACA	1 cut(s)	1108
BsrI	ACTGG	7 cut(s)	33, 204, 294, 1049, 1304, 1363, 1478
BssECI	CCNNGG	6 cut(s)	187, 501, 648, 666, 1409, 1568
BssHII	GCGCGC	1 cut(s)	474
BssMI	GATC	1 cut(s)	908
BssNI	GRCGYC	3 cut(s)	357, 378, 399
BssT1I	CCWWGG	3 cut(s)	501, 648, 1568
Bst2UI	CCWGG	4 cut(s)	180, 298, 753, 1410
Bst4CI	ACNGT	4 cut(s)	51, 1103, 1225, 1458
Bst6I	CTCTTC	1 cut(s)	1297
BstACI	GRCGYC	3 cut(s)	357, 378, 399
BstAPI	GCANNNNNTGC	1 cut(s)	107
BstAUI	TGTACA	1 cut(s)	1108
BstC8I	GCNNGC	3 cut(s)	250, 476, 1172
BstDEI	CTNAG	3 cut(s)	137, 488, 809
BstDSI	CCRYGG	2 cut(s)	187, 648
BstEII	GGTNACC	1 cut(s)	206
BstF5I	GGATG	3 cut(s)	1001, 1150, 1557
BstFNI	CGCG	4 cut(s)	375, 476, 713, 872
BstHHI	GCGC	5 cut(s)	476, 478, 525, 872, 1170
BstKTI	GATC	1 cut(s)	911
BstMAI	GTCTC	3 cut(s)	1122, 1281, 1487
BstMBI	GATC	1 cut(s)	908
BstMWI	GCNNNNNNNGC	8 cut(s)	107, 172, 254, 365, 451, 484, 529, 1438
BstNI	CCWGG	4 cut(s)	180, 298, 753, 1410
BstNSI	RCATGY	2 cut(s)	634, 1221
BstPI	GGTNACC	1 cut(s)	206
BstSCI	CCNGG	6 cut(s)	178, 296, 665, 751, 761, 1408
BstSFI	CTRYAG	1 cut(s)	912
BstUI	CGCG	4 cut(s)	375, 476, 713, 872
BstV1I	GCAGC	2 cut(s)	97, 401
BstXI	CCANNNNNNTGG	1 cut(s)	973
BsuRI	GGCC	9 cut(s)	192, 252, 270, 445, 608, 665, 683, 761, 1524
BtgI	CCRYGG	2 cut(s)	187, 648
BtgZI	GCGATG	2 cut(s)	313, 694
BtsCI	GGATG	3 cut(s)	1001, 1150, 1557
BtsIMutI	CAGTG	6 cut(s)	47, 197, 1056, 1221, 1356, 1454
BveI	ACCTGC	1 cut(s)	523
Cac8I	GCNNGC	3 cut(s)	250, 476, 1172
CaiI	CAGNNNCTG	1 cut(s)	303
CfoI	GCGC	5 cut(s)	476, 478, 525, 872, 1170
Cfr13I	GGNCC	8 cut(s)	182, 269, 340, 349, 443, 573, 663, 760
CseI	GACGC	2 cut(s)	365, 367
Csp6I	GTAC	6 cut(s)	294, 439, 993, 1109, 1481, 1544
CspCI	CAANNNNNGTGG	2 cut(s)	997, 1032
CviAII	CATG	9 cut(s)	25, 126, 353, 631, 649, 949, 967, 1218, 1438
CviQI	GTAC	6 cut(s)	294, 439, 993, 1109, 1481, 1544
DdeI	CTNAG	3 cut(s)	137, 488, 809
DpnI	GATC	1 cut(s)	910
DpnII	GATC	1 cut(s)	908
EaeI	YGGCCR	2 cut(s)	606, 681
Eam1104I	CTCTTC	1 cut(s)	1297
EarI	CTCTTC	1 cut(s)	1297
EciI	GGCGGA	1 cut(s)	994
Ecl136II	GAGCTC	1 cut(s)	232
Eco130I	CCWWGG	3 cut(s)	501, 648, 1568
Eco24I	GRGCYC	1 cut(s)	234
Eco32I	GATATC	1 cut(s)	1279
Eco47I	GGWCC	4 cut(s)	182, 340, 349, 573
Eco53kI	GAGCTC	1 cut(s)	232
Eco88I	CYCGRG	3 cut(s)	227, 333, 564
Eco91I	GGTNACC	1 cut(s)	206
EcoICRI	GAGCTC	1 cut(s)	232
EcoO109I	RGGNCCY	2 cut(s)	340, 573
EcoO65I	GGTNACC	1 cut(s)	206
EcoRI	GAATTC	1 cut(s)	17
EcoRII	CCWGG	4 cut(s)	178, 296, 751, 1408
EcoRV	GATATC	1 cut(s)	1279
EcoT14I	CCWWGG	3 cut(s)	501, 648, 1568
EcoT22I	ATGCAT	1 cut(s)	1443
EcoT38I	GRGCYC	1 cut(s)	234
ErhI	CCWWGG	3 cut(s)	501, 648, 1568
Esp3I	CGTCTC	1 cut(s)	1487
FaeI	CATG	9 cut(s)	28, 129, 356, 634, 652, 952, 970, 1221, 1441
FaqI	GGGAC	5 cut(s)	168, 202, 410, 559, 719
FatI	CATG	9 cut(s)	24, 125, 352, 630, 648, 948, 966, 1217, 1437
FauI	CCCGC	3 cut(s)	62, 407, 696
FblI	GTMKAC	1 cut(s)	582
Fnu4HI	GCNGC	4 cut(s)	111, 167, 376, 390
FokI	GGATG	3 cut(s)	988, 1157, 1544
FriOI	GRGCYC	1 cut(s)	234
Fsp4HI	GCNGC	4 cut(s)	111, 167, 376, 390
FspBI	CTAG	3 cut(s)	254, 1079, 1254
GlaI	GCGC	5 cut(s)	475, 477, 524, 871, 1169
GluI	GCNGC	4 cut(s)	111, 167, 376, 390
GsaI	CCCAGC	3 cut(s)	396, 675, 1181
HaeIII	GGCC	9 cut(s)	192, 252, 270, 445, 608, 665, 683, 761, 1524
HapII	CCGG	3 cut(s)	446, 666, 763
HgaI	GACGC	2 cut(s)	365, 367
HhaI	GCGC	5 cut(s)	476, 478, 525, 872, 1170
Hin1I	GRCGYC	3 cut(s)	357, 378, 399
Hin1II	CATG	9 cut(s)	28, 129, 356, 634, 652, 952, 970, 1221, 1441
Hin6I	GCGC	5 cut(s)	474, 476, 523, 870, 1168
HinP1I	GCGC	5 cut(s)	474, 476, 523, 870, 1168
HincII	GTYRAC	2 cut(s)	583, 852
HindII	GTYRAC	2 cut(s)	583, 852
HinfI	GANTC	5 cut(s)	29, 143, 506, 1115, 1289
HpaII	CCGG	3 cut(s)	446, 666, 763
HphI	GGTGA	1 cut(s)	602
Hpy166II	GTNNAC	2 cut(s)	583, 852
Hpy188I	TCNGA	5 cut(s)	58, 287, 742, 945, 1513
Hpy188III	TCNNGA	6 cut(s)	335, 481, 515, 892, 1325, 1336
Hpy8I	GTNNAC	2 cut(s)	583, 852
Hpy99I	CGWCG	3 cut(s)	404, 584, 587
HpyAV	CCTTC	6 cut(s)	221, 333, 790, 860, 914, 1534
HpyCH4III	ACNGT	4 cut(s)	51, 1103, 1225, 1458
HpyCH4IV	ACGT	4 cut(s)	362, 399, 585, 1083
HpyF10VI	GCNNNNNNNGC	8 cut(s)	107, 172, 254, 365, 451, 484, 529, 1438
HpyF3I	CTNAG	3 cut(s)	137, 488, 809
HpySE526I	ACGT	4 cut(s)	362, 399, 585, 1083
Hsp92I	GRCGYC	3 cut(s)	357, 378, 399
Hsp92II	CATG	9 cut(s)	28, 129, 356, 634, 652, 952, 970, 1221, 1441
HspAI	GCGC	5 cut(s)	474, 476, 523, 870, 1168
KflI	GGGWCCC	1 cut(s)	573
KpnI	GGTACC	2 cut(s)	297, 1547
Kzo9I	GATC	1 cut(s)	908
LmnI	GCTCC	6 cut(s)	237, 288, 652, 715, 742, 805
Lsp1109I	GCAGC	2 cut(s)	97, 401
LweI	GCATC	4 cut(s)	474, 846, 1135, 1460
MaeI	CTAG	3 cut(s)	254, 1079, 1254
MaeII	ACGT	4 cut(s)	362, 399, 585, 1083
MaeIII	GTNAC	4 cut(s)	206, 551, 1056, 1364
MalI	GATC	1 cut(s)	910
MboI	GATC	1 cut(s)	908
MboII	GAAGA	5 cut(s)	13, 79, 1284, 1546, 1549
MfeI	CAATTG	1 cut(s)	1014
MhlI	GDGCHC	1 cut(s)	234
MlsI	TGGCCA	1 cut(s)	608
MluCI	AATT	4 cut(s)	17, 102, 1014, 1035
MluNI	TGGCCA	1 cut(s)	608
MlyI	GAGTC	3 cut(s)	500, 1124, 1283
MmeI	TCCRAC	2 cut(s)	36, 310
Mox20I	TGGCCA	1 cut(s)	608
Mph1103I	ATGCAT	1 cut(s)	1443
MscI	TGGCCA	1 cut(s)	608
MseI	TTAA	4 cut(s)	279, 1193, 1266, 1320
MslI	CAYNNNNRTG	2 cut(s)	12, 629
Msp20I	TGGCCA	1 cut(s)	608
MspA1I	CMGCKG	2 cut(s)	69, 392
MspI	CCGG	3 cut(s)	446, 666, 763
MspR9I	CCNGG	6 cut(s)	180, 298, 667, 753, 763, 1410
MunI	CAATTG	1 cut(s)	1014
Mva1269I	GAATGC	1 cut(s)	1462
MvaI	CCWGG	4 cut(s)	180, 298, 753, 1410
MvnI	CGCG	4 cut(s)	375, 476, 713, 872
MwoI	GCNNNNNNNGC	8 cut(s)	107, 172, 254, 365, 451, 484, 529, 1438
NciI	CCSGG	2 cut(s)	667, 763
NcoI	CCATGG	1 cut(s)	648
NdeII	GATC	1 cut(s)	908
NlaIII	CATG	9 cut(s)	28, 129, 356, 634, 652, 952, 970, 1221, 1441
NlaIV	GGNNCC	7 cut(s)	184, 295, 574, 575, 646, 664, 1545
NmeAIII	GCCGAG	2 cut(s)	77, 709
NmuCI	GTSAC	1 cut(s)	1364
NsiI	ATGCAT	1 cut(s)	1443
NspI	RCATGY	2 cut(s)	634, 1221
PaeR7I	CTCGAG	1 cut(s)	333
PaqCI	CACCTGC	1 cut(s)	523
PauI	GCGCGC	1 cut(s)	474
PciI	ACATGT	1 cut(s)	630
PcsI	WCGNNNNNNNCGW	1 cut(s)	576
PctI	GAATGC	1 cut(s)	1462
PfeI	GAWTC	2 cut(s)	29, 143
Pfl23II	CGTACG	1 cut(s)	438
PflMI	CCANNNNNTGG	1 cut(s)	203
PkrI	GCNGC	4 cut(s)	112, 168, 377, 391
PleI	GAGTC	3 cut(s)	500, 1123, 1283
PpsI	GAGTC	3 cut(s)	500, 1123, 1283
PpuMI	RGGWCCY	2 cut(s)	340, 573
PscI	ACATGT	1 cut(s)	630
PshBI	ATTAAT	1 cut(s)	1193
Psp124BI	GAGCTC	1 cut(s)	234
Psp5II	RGGWCCY	2 cut(s)	340, 573
Psp6I	CCWGG	4 cut(s)	178, 296, 751, 1408
PspEI	GGTNACC	1 cut(s)	206
PspFI	CCCAGC	3 cut(s)	392, 671, 1177
PspGI	CCWGG	4 cut(s)	178, 296, 751, 1408
PspLI	CGTACG	1 cut(s)	438
PspN4I	GGNNCC	7 cut(s)	184, 295, 574, 575, 646, 664, 1545
PspPI	GGNCC	8 cut(s)	182, 269, 340, 349, 443, 573, 663, 760
PspPPI	RGGWCCY	2 cut(s)	340, 573
PstNI	CAGNNNCTG	1 cut(s)	303
PteI	GCGCGC	1 cut(s)	474
PvuII	CAGCTG	1 cut(s)	392
RsaI	GTAC	6 cut(s)	295, 440, 994, 1110, 1482, 1545
RsaNI	GTAC	6 cut(s)	294, 439, 993, 1109, 1481, 1544
RseI	CAYNNNNRTG	2 cut(s)	12, 629
SacI	GAGCTC	1 cut(s)	234
SalI	GTCGAC	1 cut(s)	581
SaqAI	TTAA	4 cut(s)	279, 1193, 1266, 1320
SatI	GCNGC	4 cut(s)	111, 167, 376, 390
Sau3AI	GATC	1 cut(s)	908
Sau96I	GGNCC	8 cut(s)	182, 269, 340, 349, 443, 573, 663, 760
ScaI	AGTACT	1 cut(s)	994
SchI	GAGTC	3 cut(s)	500, 1124, 1283
ScrFI	CCNGG	6 cut(s)	180, 298, 667, 753, 763, 1410
SduI	GDGCHC	1 cut(s)	234
SfaNI	GCATC	4 cut(s)	474, 846, 1135, 1460
SfcI	CTRYAG	1 cut(s)	912
Sfr274I	CTCGAG	1 cut(s)	333
SgrDI	CGTCGACG	1 cut(s)	581
SinI	GGWCC	4 cut(s)	182, 340, 349, 573
SlaI	CTCGAG	1 cut(s)	333
SmiMI	CAYNNNNRTG	2 cut(s)	12, 629
SmlI	CTYRAG	3 cut(s)	333, 344, 479
SmoI	CTYRAG	3 cut(s)	333, 344, 479
Sse9I	AATT	4 cut(s)	17, 102, 1014, 1035
SsiI	CCGC	8 cut(s)	69, 167, 375, 414, 498, 703, 713, 1005
SspMI	CTAG	3 cut(s)	254, 1079, 1254
SstI	GAGCTC	1 cut(s)	234
StyD4I	CCNGG	6 cut(s)	178, 296, 665, 751, 761, 1408
StyI	CCWWGG	3 cut(s)	501, 648, 1568
TaaI	ACNGT	4 cut(s)	51, 1103, 1225, 1458
TaiI	ACGT	4 cut(s)	365, 402, 588, 1086
TaqI	TCGA	2 cut(s)	334, 582
TasI	AATT	4 cut(s)	17, 102, 1014, 1035
TatI	WGTACW	2 cut(s)	992, 1108
TauI	GCSGC	2 cut(s)	169, 378
TfiI	GAWTC	2 cut(s)	29, 143
Tru1I	TTAA	4 cut(s)	279, 1193, 1266, 1320
Tru9I	TTAA	4 cut(s)	279, 1193, 1266, 1320
TscAI	CASTG	6 cut(s)	54, 204, 1056, 1228, 1363, 1461
TseFI	GTSAC	1 cut(s)	1364
TseI	GCWGC	2 cut(s)	110, 389
Tsp45I	GTSAC	1 cut(s)	1364
TspDTI	ATGAA	7 cut(s)	13, 30, 809, 933, 1055, 1169, 1547
TspRI	CASTG	6 cut(s)	54, 204, 1056, 1228, 1363, 1461
Van91I	CCANNNNNTGG	1 cut(s)	203
VpaK11BI	GGWCC	4 cut(s)	182, 340, 349, 573
VspI	ATTAAT	1 cut(s)	1193
XapI	RAATTY	1 cut(s)	17
XceI	RCATGY	2 cut(s)	634, 1221
XhoI	CTCGAG	1 cut(s)	333
XmiI	GTMKAC	1 cut(s)	582
XspI	CTAG	3 cut(s)	254, 1079, 1254
ZraI	GACGTC	1 cut(s)	400
ZrmI	AGTACT	1 cut(s)	994
Zsp2I	ATGCAT	1 cut(s)	1443

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.