Rh7DG200900

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
19026943 .. 19028973
2031 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG200900.1

Sequence Viewer

Length: 216 bp
ATGAAGGATGTGGAGCTTAGGTTTGATAGGATTTTTGAGAAAGTTATCAATCAAAGGTTGACGATGCAGAAAGAAGGCGCGAAAGAGAGCAATGATTTCTTGACATTTCTATTGCGATCTATAGATGAAGGAGGAGACGGCAAAACTCCTCTGACCATGACACATCTCAAAGCCATGCTCTTGATCAATATCCTAGCTTGGACAACCCTTGCCTAG

Protein Analysis

71

Amino Acids

8.17

Weight (kDa)

6.55

Isoelectric Point (pI)

26.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000377)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 80
AluBI AGCT 2 cut(s) 16, 197
AluI AGCT 2 cut(s) 16, 197
Alw26I GTCTC 1 cut(s) 129
AspLEI GCGC 1 cut(s) 80
BceAI ACGGC 1 cut(s) 154
BclI TGATCA 1 cut(s) 183
BcoDI GTCTC 1 cut(s) 129
BfaI CTAG 2 cut(s) 194, 214
BfmI CTRYAG 1 cut(s) 120
BmsI GCATC 1 cut(s) 54
Bpu10I CCTNAGC 1 cut(s) 17
BsaBI GATNNNNATC 1 cut(s) 188
BsaXI ACNNNNNCTCC 2 cut(s) 5, 35
Bse3DI GCAATG 1 cut(s) 97
Bse8I GATNNNNATC 1 cut(s) 188
BseGI GGATG 1 cut(s) 13
BseJI GATNNNNATC 1 cut(s) 188
BseMI GCAATG 1 cut(s) 97
BseRI GAGGAG 2 cut(s) 138, 147
Bsh1236I CGCG 1 cut(s) 80
BsmAI GTCTC 1 cut(s) 129
BsmBI CGTCTC 1 cut(s) 129
Bsp143I GATC 2 cut(s) 116, 183
BspFNI CGCG 1 cut(s) 80
BsrDI GCAATG 1 cut(s) 97
BssMI GATC 2 cut(s) 116, 183
BstDEI CTNAG 1 cut(s) 17
BstF5I GGATG 1 cut(s) 13
BstFNI CGCG 1 cut(s) 80
BstHHI GCGC 1 cut(s) 80
BstKTI GATC 2 cut(s) 119, 186
BstMAI GTCTC 1 cut(s) 129
BstMBI GATC 2 cut(s) 116, 183
BstSFI CTRYAG 1 cut(s) 120
BstUI CGCG 1 cut(s) 80
BtsCI GGATG 1 cut(s) 13
CfoI GCGC 1 cut(s) 80
CviAII CATG 2 cut(s) 157, 175
CviJI RGCY 3 cut(s) 16, 173, 197
CviKI_1 RGCY 3 cut(s) 16, 173, 197
DdeI CTNAG 1 cut(s) 17
DpnI GATC 2 cut(s) 118, 185
DpnII GATC 2 cut(s) 116, 183
Esp3I CGTCTC 1 cut(s) 129
FaeI CATG 2 cut(s) 160, 178
FaiI YATR 3 cut(s) 122, 158, 176
FatI CATG 2 cut(s) 156, 174
FbaI TGATCA 1 cut(s) 183
FokI GGATG 1 cut(s) 20
FspBI CTAG 2 cut(s) 194, 214
GlaI GCGC 1 cut(s) 79
HhaI GCGC 1 cut(s) 80
Hin1II CATG 2 cut(s) 160, 178
Hin6I GCGC 1 cut(s) 78
HinP1I GCGC 1 cut(s) 78
HincII GTYRAC 1 cut(s) 60
HindII GTYRAC 1 cut(s) 60
Hpy166II GTNNAC 1 cut(s) 60
Hpy188I TCNGA 1 cut(s) 153
Hpy188III TCNNGA 2 cut(s) 100, 181
Hpy8I GTNNAC 1 cut(s) 60
HpyAV CCTTC 2 cut(s) 68, 122
HpyCH4V TGCA 1 cut(s) 67
HpyF3I CTNAG 1 cut(s) 17
Hsp92II CATG 2 cut(s) 160, 178
HspAI GCGC 1 cut(s) 78
Ksp22I TGATCA 1 cut(s) 183
Kzo9I GATC 2 cut(s) 116, 183
LmnI GCTCC 1 cut(s) 13
LweI GCATC 1 cut(s) 54
MaeI CTAG 2 cut(s) 194, 214
MalI GATC 2 cut(s) 118, 185
MboI GATC 2 cut(s) 116, 183
MnlI CCTC 2 cut(s) 125, 159
MvnI CGCG 1 cut(s) 80
NdeII GATC 2 cut(s) 116, 183
NlaIII CATG 2 cut(s) 160, 178
Sau3AI GATC 2 cut(s) 116, 183
SetI ASST 4 cut(s) 18, 23, 59, 199
SfaNI GCATC 1 cut(s) 54
SfcI CTRYAG 1 cut(s) 120
SgeI CNNG 7 cut(s) 91, 112, 169, 187, 193, 206, 210
SspMI CTAG 2 cut(s) 194, 214
TspDTI ATGAA 2 cut(s) 17, 141
XspI CTAG 2 cut(s) 194, 214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.