Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0000377

Physical Location & Seq

Genomic Coordinates Reverse (-)

8638192 .. 8638808

Gene Structure 617 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G071500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 576 bp

ATGGTGCTGGCTGGAACCGACACATCCTCCAACACAATAGAGTTTGCCATGGCCGAAGTCATGAACAAACCAGAGGTGATGCAAAAAGCCCAGCAAGAACTAGACGCCGTAGTTGGCAAGCACAACATTGTAGAAGAATCCCACAATCATAAACTACCCTACTTACAAGCCGTCATGAAAGAAACACTTCGCTTGCACCCAGTCGTCCCACTCTTAATCCCTCACTCCCCAACCAAAACCTGCACCGTCGGAGGCTACACCATCCCGAAAGGGTCTCAGGTTTTCGTCAACGTCTGGGCCATACACAAAGACCCTTGTAACTGGGAGAACCCATTGGAGTTTGATCCAAACAGGTTCTTGGATAGTAAATGGGATTATAGTGGAAGGGACTTCACCTATTTGCCGTTTAGGTCTGGGAAAAGAATATGTATCGGGATCGCTATGGCTGAGAGGATGGTATTGCCACAAGGGGAGGAGCAGGATTTTTCAGAGAAGTTTGGGCTTGCTTTGAAGAAGGAGGTTCCTTTGGTTGCCATCCCCACTCCAATGTTATCGGATCCAGCACTCTATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0016020 GO:0019748 GO:0042221 GO:0044550 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934

Pfam Domains

Protein Families

p450

Protein Analysis

192

Amino Acids

21.52

Weight (kDa)

5.7

Isoelectric Point (pI)

44.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca	FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica	MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica	Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis	pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis	RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata	RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora	Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii	Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa	Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha	Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana	Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	248
AclWI	GGATC	4 cut(s)	338, 443, 551, 564
AcoI	YGGCCR	1 cut(s)	51
AcyI	GRCGYC	1 cut(s)	105
AgsI	TTSAA	1 cut(s)	511
Alw26I	GTCTC	1 cut(s)	279
AlwI	GGATC	4 cut(s)	338, 443, 551, 564
AoxI	GGCC	2 cut(s)	51, 297
Asp700I	GAANNNNTTC	1 cut(s)	186
AspS9I	GGNCC	1 cut(s)	297
AsuHPI	GGTGA	2 cut(s)	88, 385
BamHI	GGATCC	1 cut(s)	556
BccI	CCATC	3 cut(s)	269, 448, 542
BceAI	ACGGC	3 cut(s)	92, 155, 388
BcoDI	GTCTC	1 cut(s)	279
BfaI	CTAG	1 cut(s)	101
BfuAI	ACCTGC	1 cut(s)	248
BmgT120I	GGNCC	1 cut(s)	297
BmiI	GGNNCC	3 cut(s)	16, 522, 558
BmrI	ACTGGG	2 cut(s)	194, 331
BmsI	GCATC	1 cut(s)	69
BmuI	ACTGGG	2 cut(s)	194, 331
BsaHI	GRCGYC	1 cut(s)	105
BsaI	GGTCTC	1 cut(s)	279
BsaJI	CCNNGG	1 cut(s)	48
BsaXI	ACNNNNNCTCC	2 cut(s)	11, 41
Bse1I	ACTGG	2 cut(s)	200, 326
BseDI	CCNNGG	1 cut(s)	48
BseGI	GGATG	4 cut(s)	23, 261, 459, 534
BseMII	CTCAG	2 cut(s)	290, 438
BseNI	ACTGG	2 cut(s)	200, 326
BseRI	GAGGAG	1 cut(s)	488
BseYI	CCCAGC	1 cut(s)	90
BsgI	GTGCAG	1 cut(s)	226
BshFI	GGCC	2 cut(s)	53, 299
BslFI	GGGAC	2 cut(s)	191, 401
BsmAI	GTCTC	1 cut(s)	279
BsmFI	GGGAC	2 cut(s)	191, 401
BsnI	GGCC	2 cut(s)	53, 299
Bso31I	GGTCTC	1 cut(s)	279
Bsp143I	GATC	3 cut(s)	343, 435, 556
Bsp19I	CCATGG	1 cut(s)	48
BspANI	GGCC	2 cut(s)	53, 299
BspCNI	CTCAG	2 cut(s)	289, 439
BspHI	TCATGA	2 cut(s)	60, 174
BspLI	GGNNCC	3 cut(s)	16, 522, 558
BspMI	ACCTGC	1 cut(s)	248
BspPI	GGATC	4 cut(s)	338, 443, 551, 564
BspTNI	GGTCTC	1 cut(s)	279
BsrI	ACTGG	2 cut(s)	200, 326
BssECI	CCNNGG	1 cut(s)	48
BssMI	GATC	3 cut(s)	343, 435, 556
BssNI	GRCGYC	1 cut(s)	105
BssT1I	CCWWGG	1 cut(s)	48
Bst4CI	ACNGT	1 cut(s)	247
BstACI	GRCGYC	1 cut(s)	105
BstC8I	GCNNGC	4 cut(s)	9, 119, 194, 504
BstDEI	CTNAG	2 cut(s)	276, 447
BstDSI	CCRYGG	1 cut(s)	48
BstF5I	GGATG	4 cut(s)	23, 261, 459, 534
BstKTI	GATC	3 cut(s)	346, 438, 559
BstMAI	GTCTC	1 cut(s)	279
BstMBI	GATC	3 cut(s)	343, 435, 556
BstX2I	RGATCY	1 cut(s)	556
BstYI	RGATCY	1 cut(s)	556
BsuRI	GGCC	2 cut(s)	53, 299
BtgI	CCRYGG	1 cut(s)	48
BtsCI	GGATG	4 cut(s)	23, 261, 459, 534
BveI	ACCTGC	1 cut(s)	248
Cac8I	GCNNGC	4 cut(s)	9, 119, 194, 504
CciI	TCATGA	2 cut(s)	60, 174
Cfr13I	GGNCC	1 cut(s)	297
CseI	GACGC	1 cut(s)	113
CviAII	CATG	3 cut(s)	49, 61, 175
CviJI	RGCY	8 cut(s)	11, 53, 89, 170, 255, 299, 446, 502
CviKI_1	RGCY	8 cut(s)	11, 53, 89, 170, 255, 299, 446, 502
DdeI	CTNAG	2 cut(s)	276, 447
DpnI	GATC	3 cut(s)	345, 437, 558
DpnII	GATC	3 cut(s)	343, 435, 556
EaeI	YGGCCR	1 cut(s)	51
Eco130I	CCWWGG	1 cut(s)	48
Eco31I	GGTCTC	1 cut(s)	279
EcoT14I	CCWWGG	1 cut(s)	48
ErhI	CCWWGG	1 cut(s)	48
FaeI	CATG	3 cut(s)	52, 64, 178
FaiI	YATR	9 cut(s)	50, 62, 150, 176, 302, 378, 427, 443, 570
FalI	AAGNNNNNCTT	2 cut(s)	171, 203
FaqI	GGGAC	2 cut(s)	191, 401
FatI	CATG	3 cut(s)	48, 60, 174
FokI	GGATG	4 cut(s)	10, 248, 466, 521
FspBI	CTAG	1 cut(s)	101
GsaI	CCCAGC	1 cut(s)	94
HaeIII	GGCC	2 cut(s)	53, 299
HgaI	GACGC	1 cut(s)	113
Hin1I	GRCGYC	1 cut(s)	105
Hin1II	CATG	3 cut(s)	52, 64, 178
HincII	GTYRAC	1 cut(s)	289
HindII	GTYRAC	1 cut(s)	289
HinfI	GANTC	1 cut(s)	137
HphI	GGTGA	2 cut(s)	88, 385
Hpy166II	GTNNAC	1 cut(s)	289
Hpy188I	TCNGA	3 cut(s)	251, 490, 556
Hpy188III	TCNNGA	4 cut(s)	61, 175, 265, 433
Hpy8I	GTNNAC	1 cut(s)	289
Hpy99I	CGWCG	1 cut(s)	251
HpyAV	CCTTC	2 cut(s)	378, 508
HpyCH4III	ACNGT	1 cut(s)	247
HpyCH4IV	ACGT	1 cut(s)	291
HpyCH4V	TGCA	3 cut(s)	82, 196, 243
HpyF3I	CTNAG	2 cut(s)	276, 447
HpySE526I	ACGT	1 cut(s)	291
Hsp92I	GRCGYC	1 cut(s)	105
Hsp92II	CATG	3 cut(s)	52, 64, 178
Kzo9I	GATC	3 cut(s)	343, 435, 556
LmnI	GCTCC	1 cut(s)	475
LweI	GCATC	1 cut(s)	69
MaeI	CTAG	1 cut(s)	101
MaeII	ACGT	1 cut(s)	291
MaeIII	GTNAC	1 cut(s)	317
MalI	GATC	3 cut(s)	345, 437, 558
MboI	GATC	3 cut(s)	343, 435, 556
MboII	GAAGA	2 cut(s)	146, 523
MflI	RGATCY	1 cut(s)	556
MmeI	TCCRAC	2 cut(s)	54, 229
MnlI	CCTC	7 cut(s)	37, 67, 231, 245, 444, 466, 511
MroXI	GAANNNNTTC	1 cut(s)	186
MseI	TTAA	1 cut(s)	215
MslI	CAYNNNNRTG	1 cut(s)	545
NcoI	CCATGG	1 cut(s)	48
NdeII	GATC	3 cut(s)	343, 435, 556
NlaIII	CATG	3 cut(s)	52, 64, 178
NlaIV	GGNNCC	3 cut(s)	16, 522, 558
PagI	TCATGA	2 cut(s)	60, 174
PdmI	GAANNNNTTC	1 cut(s)	186
PfeI	GAWTC	1 cut(s)	137
PspFI	CCCAGC	1 cut(s)	90
PspN4I	GGNNCC	3 cut(s)	16, 522, 558
PspPI	GGNCC	1 cut(s)	297
PsuI	RGATCY	1 cut(s)	556
RseI	CAYNNNNRTG	1 cut(s)	545
SaqAI	TTAA	1 cut(s)	215
Sau3AI	GATC	3 cut(s)	343, 435, 556
Sau96I	GGNCC	1 cut(s)	297
SetI	ASST	8 cut(s)	78, 242, 282, 294, 356, 398, 413, 522
SfaNI	GCATC	1 cut(s)	69
SmiMI	CAYNNNNRTG	1 cut(s)	545
SspMI	CTAG	1 cut(s)	101
StyI	CCWWGG	1 cut(s)	48
TaaI	ACNGT	1 cut(s)	247
TaiI	ACGT	1 cut(s)	294
TfiI	GAWTC	1 cut(s)	137
Tru1I	TTAA	1 cut(s)	215
Tru9I	TTAA	1 cut(s)	215
TspDTI	ATGAA	2 cut(s)	77, 191
XmnI	GAANNNNTTC	1 cut(s)	186
XspI	CTAG	1 cut(s)	101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.