Rroxscaffold_3G00255010

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000377
Physical Location & Seq
Forward (+)
49301603 .. 49303615
2013 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00255010.1

Sequence Viewer

Length: 1290 bp
ATGGCACCCTCTTATGAATTCTTCATGGAATCCAATTCCTTATCCTCACTGTGGTCGGACAACAACAGCGGGAGTTGGGGAGTGTTGTTCACTATCTCCGCAATTTTTGCAGCAATTTTTTACGCATGGAGTTGCCTGAAGAGTAGCAGAATCTCGCCGCCGTTGCCTCCCGGTCCACGCGGCCTCCCGCTGTTTGGTAATCTTCTGTCCGTTGATCCACAGCTCCACACCTACTTTGCGGGCCTATCCAAAACTTACGGCCCAATCTATAAGCTCCGACTGGGAACCAGGCTCTGTGTCGTAATAGCCTCCCCTTCCGCCGCTCGAGAGGTGCTCAAAGAGAATGATCTCACGTTCTCCAGTCGCGGCGTCAATTGTGCAGCTGGGGACGTCGCACTCTACGGCGGGGCAGGTATAGTTTGCACCCCGTACGGGCCGGAGTGGCGAATGTTGAGGAAAGTGTGCGTGCTCAAGATGCTTAGCAACACCGCCTTGGACTCGGTTCACCAATTGCGCCACTCGCAGGTCCGAAAAGCTGTGCGTTACTTCTACAGTCAGGTTGGATCGCCCGTCAACATTGGTGAGCAACTTTTCGTGGCCACGCTCAATCTTACCACCAACATGTTATGGGGCGGCACCATGCTGGAGGAGGAGGCTGGGGCTGAGGTTTTGGCGGAGTTTAGGGAAGCGATGGTCGACATCGCGGTGCTTTCTGGGAAACCGAATATTTCCGAGCTTTATCCGTTTTTGACCCGGTTTGATGTGCAAGGCATAAGGAAGCAGATGAAGGCTGTGGAGCTCAAGTTTGATAGCATTTTTGAGAAAGTTATTGATCAACGGTTGAAAATGGACAAACAAGGCGCGCAAGAGAGCAAGGATTTCTTGACATTTATGTTGCGATATAAAGATGAAGGAGGAGATGCCAAAACTCCTCTCACCATGACCCATCTCAAAGCCTTGCTCTTGCTCTCCAGTTACCGCTTCAGTGGAGGAGAACGCAAGATCAGTAGACCCCATACCAAAATTCCGGCATCGAGACCAGGGACAATGCCACCACCCCTAGCATCCTTGATCAAGCCACCCAAGCTGAGATGTTATGCTATTCCACAAAACAAGAACCCTCTCGACCCCAGAAAACGGAATGCTAGTCCCAACCGCTGCGCCTCCAACCAACTTGAGCCAGGCGTTCGAATCAGAGACAGAATTAGGAACCTAGGATGGATGCCCAGTCCGTCTCCTGCCATCAAACCCCAGCCACAGATCACCAGAACCGCCATCGCTGCCACTTGA

Protein Analysis

429

Amino Acids

47.56

Weight (kDa)

9.72

Isoelectric Point (pI)

44.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 56 - 321 8.1e-31 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000377)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 393
Acc36I ACCTGC 2 cut(s) 401, 514
AccB1I GGYRCC 2 cut(s) 4, 635
AccBSI CCGCTC 1 cut(s) 323
AccI GTMKAC 2 cut(s) 696, 1009
AccII CGCG 4 cut(s) 180, 366, 704, 863
AclWI GGATC 2 cut(s) 209, 571
AcoI YGGCCR 1 cut(s) 597
AcsI RAATTY 2 cut(s) 17, 1023
AcuI CTGAAG 2 cut(s) 158, 967
AcyI GRCGYC 2 cut(s) 369, 390
AfaI GTAC 1 cut(s) 431
AfiI CCNNNNNNNGG 5 cut(s) 51, 194, 432, 523, 1137
AflIII ACRYGT 1 cut(s) 621
AgsI TTSAA 1 cut(s) 844
AjnI CCWGG 3 cut(s) 287, 1039, 1180
AluBI AGCT 7 cut(s) 223, 274, 383, 536, 736, 799, 1087
AluI AGCT 7 cut(s) 223, 274, 383, 536, 736, 799, 1087
Alw21I GWGCWC 3 cut(s) 336, 471, 801
Alw26I GTCTC 3 cut(s) 1030, 1191, 1239
AlwI GGATC 2 cut(s) 209, 571
AlwNI CAGNNNCTG 1 cut(s) 294
Ama87I CYCGRG 1 cut(s) 324
AoxI GGCC 5 cut(s) 181, 241, 259, 434, 597
ApeKI GCWGC 4 cut(s) 110, 380, 1158, 1280
ApoI RAATTY 2 cut(s) 17, 1023
AspA2I CCTAGG 1 cut(s) 1213
AspLEI GCGC 4 cut(s) 516, 863, 865, 1163
AspS9I GGNCC 5 cut(s) 173, 241, 260, 434, 526
AsuC2I CCSGG 2 cut(s) 171, 754
AsuHPI GGTGA 4 cut(s) 497, 593, 928, 1255
AsuII TTCGAA 1 cut(s) 1189
AvaI CYCGRG 1 cut(s) 324
AvaII GGWCC 2 cut(s) 173, 526
AvrII CCTAGG 1 cut(s) 1213
BalI TGGCCA 1 cut(s) 599
BanI GGYRCC 2 cut(s) 4, 635
BanII GRGCYC 1 cut(s) 801
Bbv12I GWGCWC 3 cut(s) 336, 471, 801
BbvCI CCTCAGC 1 cut(s) 663
BbvI GCAGC 4 cut(s) 122, 392, 1145, 1267
BccI CCATC 5 cut(s) 685, 954, 1212, 1250, 1283
BceAI ACGGC 3 cut(s) 145, 274, 418
BciT130I CCWGG 3 cut(s) 289, 1041, 1182
BclI TGATCA 2 cut(s) 832, 1071
BcnI CCSGG 2 cut(s) 171, 754
BcoDI GTCTC 3 cut(s) 1030, 1191, 1239
BfaI CTAG 3 cut(s) 1061, 1146, 1214
BfmI CTRYAG 1 cut(s) 550
BfuAI ACCTGC 2 cut(s) 401, 514
BglI GCCNNNNNGGC 1 cut(s) 442
BisI GCNGC 9 cut(s) 111, 158, 181, 321, 367, 381, 634, 1159, 1281
BlnI CCTAGG 1 cut(s) 1213
BlpI GCTNAGC 1 cut(s) 479
BlsI GCNGC 9 cut(s) 112, 159, 182, 322, 368, 382, 635, 1160, 1282
Bme1390I CCNGG 5 cut(s) 171, 289, 754, 1041, 1182
Bme18I GGWCC 2 cut(s) 173, 526
BmeT110I CYCGRG 1 cut(s) 324
BmgT120I GGNCC 5 cut(s) 173, 241, 260, 434, 526
BmiI GGNNCC 4 cut(s) 6, 286, 637, 1211
BmrFI CCNGG 5 cut(s) 171, 289, 754, 1041, 1182
BmrI ACTGGG 2 cut(s) 290, 1221
BmsI GCATC 5 cut(s) 465, 910, 1040, 1073, 1212
BmuI ACTGGG 2 cut(s) 290, 1221
BplI GAGNNNNNCTC 2 cut(s) 318, 350
BpmI CTGGAG 3 cut(s) 343, 665, 955
Bpu10I CCTNAGC 1 cut(s) 663
Bpu1102I GCTNAGC 1 cut(s) 479
Bpu14I TTCGAA 1 cut(s) 1189
BpuEI CTTGAG 3 cut(s) 455, 785, 1196
BpuMI CCSGG 2 cut(s) 171, 754
BsaHI GRCGYC 2 cut(s) 369, 390
BsaI GGTCTC 1 cut(s) 1030
BsaJI CCNNGG 3 cut(s) 492, 1040, 1213
BsaXI ACNNNNNCTCC 4 cut(s) 168, 198, 788, 818
Bsc4I CCNNNNNNNGG 5 cut(s) 51, 194, 432, 523, 1137
Bse1I ACTGG 4 cut(s) 285, 360, 972, 1227
BseBI CCWGG 3 cut(s) 289, 1041, 1182
BseDI CCNNGG 3 cut(s) 492, 1040, 1213
BseGI GGATG 3 cut(s) 1064, 1223, 1227
BseLI CCNNNNNNNGG 5 cut(s) 51, 194, 432, 523, 1137
BseMII CTCAG 2 cut(s) 654, 1079
BseNI ACTGG 4 cut(s) 285, 360, 972, 1227
BsePI GCGCGC 1 cut(s) 861
BseRI GAGGAG 5 cut(s) 662, 665, 921, 930, 1005
BseXI GCAGC 4 cut(s) 122, 392, 1145, 1267
BseYI CCCAGC 3 cut(s) 383, 656, 1251
BsgI GTGCAG 1 cut(s) 399
Bsh1236I CGCG 4 cut(s) 180, 366, 704, 863
BshFI GGCC 5 cut(s) 183, 243, 261, 436, 599
BshNI GGYRCC 2 cut(s) 4, 635
BsiHKAI GWGCWC 3 cut(s) 336, 471, 801
BsiHKCI CYCGRG 1 cut(s) 324
BsiSI CCGG 4 cut(s) 171, 437, 754, 1028
BsiWI CGTACG 1 cut(s) 429
BslFI GGGAC 3 cut(s) 401, 1057, 1134
BslI CCNNNNNNNGG 5 cut(s) 51, 194, 432, 523, 1137
BsmAI GTCTC 3 cut(s) 1030, 1191, 1239
BsmBI CGTCTC 1 cut(s) 1239
BsmFI GGGAC 3 cut(s) 401, 1057, 1134
BsmI GAATGC 1 cut(s) 1147
BsnI GGCC 5 cut(s) 183, 243, 261, 436, 599
Bso31I GGTCTC 1 cut(s) 1030
BsoBI CYCGRG 1 cut(s) 324
Bsp119I TTCGAA 1 cut(s) 1189
Bsp1286I GDGCHC 3 cut(s) 336, 471, 801
Bsp143I GATC 7 cut(s) 214, 346, 563, 832, 1002, 1071, 1260
Bsp1720I GCTNAGC 1 cut(s) 479
BspANI GGCC 5 cut(s) 183, 243, 261, 436, 599
BspCNI CTCAG 2 cut(s) 655, 1080
BspFNI CGCG 4 cut(s) 180, 366, 704, 863
BspLI GGNNCC 4 cut(s) 6, 286, 637, 1211
BspMI ACCTGC 2 cut(s) 401, 514
BspPI GGATC 2 cut(s) 209, 571
BspT104I TTCGAA 1 cut(s) 1189
BspT107I GGYRCC 2 cut(s) 4, 635
BspTNI GGTCTC 1 cut(s) 1030
BsrBI CCGCTC 1 cut(s) 323
BsrI ACTGG 4 cut(s) 285, 360, 972, 1227
BssECI CCNNGG 3 cut(s) 492, 1040, 1213
BssHII GCGCGC 1 cut(s) 861
BssMI GATC 7 cut(s) 214, 346, 563, 832, 1002, 1071, 1260
BssNI GRCGYC 2 cut(s) 369, 390
BssT1I CCWWGG 2 cut(s) 492, 1213
Bst2UI CCWGG 3 cut(s) 289, 1041, 1182
Bst4CI ACNGT 3 cut(s) 51, 554, 840
Bst6I CTCTTC 1 cut(s) 134
BstACI GRCGYC 2 cut(s) 369, 390
BstAPI GCANNNNNTGC 1 cut(s) 107
BstBI TTCGAA 1 cut(s) 1189
BstC8I GCNNGC 3 cut(s) 241, 467, 863
BstDEI CTNAG 3 cut(s) 479, 663, 1088
BstF5I GGATG 3 cut(s) 1064, 1223, 1227
BstFNI CGCG 4 cut(s) 180, 366, 704, 863
BstHHI GCGC 4 cut(s) 516, 863, 865, 1163
BstKTI GATC 7 cut(s) 217, 349, 566, 835, 1005, 1074, 1263
BstMAI GTCTC 3 cut(s) 1030, 1191, 1239
BstMBI GATC 7 cut(s) 214, 346, 563, 832, 1002, 1071, 1260
BstMWI GCNNNNNNNGC 7 cut(s) 107, 163, 442, 475, 520, 1084, 1280
BstNI CCWGG 3 cut(s) 289, 1041, 1182
BstNSI RCATGY 1 cut(s) 625
BstSCI CCNGG 5 cut(s) 169, 287, 752, 1039, 1180
BstSFI CTRYAG 1 cut(s) 550
BstUI CGCG 4 cut(s) 180, 366, 704, 863
BstV1I GCAGC 4 cut(s) 122, 392, 1145, 1267
BsuRI GGCC 5 cut(s) 183, 243, 261, 436, 599
BtgZI GCGATG 3 cut(s) 685, 704, 1261
BtsCI GGATG 3 cut(s) 1064, 1223, 1227
BtsIMutI CAGTG 2 cut(s) 47, 991
BveI ACCTGC 2 cut(s) 401, 514
Cac8I GCNNGC 3 cut(s) 241, 467, 863
CaiI CAGNNNCTG 1 cut(s) 294
CfoI GCGC 4 cut(s) 516, 863, 865, 1163
Cfr13I GGNCC 5 cut(s) 173, 241, 260, 434, 526
CseI GACGC 1 cut(s) 358
Csp6I GTAC 1 cut(s) 430
CviAII CATG 5 cut(s) 25, 126, 622, 640, 940
CviQI GTAC 1 cut(s) 430
DdeI CTNAG 3 cut(s) 479, 663, 1088
DpnI GATC 7 cut(s) 216, 348, 565, 834, 1004, 1073, 1262
DpnII GATC 7 cut(s) 214, 346, 563, 832, 1002, 1071, 1260
EaeI YGGCCR 1 cut(s) 597
Eam1104I CTCTTC 1 cut(s) 134
EarI CTCTTC 1 cut(s) 134
EciI GGCGGA 2 cut(s) 307, 689
Ecl136II GAGCTC 1 cut(s) 799
Eco130I CCWWGG 2 cut(s) 492, 1213
Eco24I GRGCYC 1 cut(s) 801
Eco31I GGTCTC 1 cut(s) 1030
Eco47I GGWCC 2 cut(s) 173, 526
Eco53kI GAGCTC 1 cut(s) 799
Eco57I CTGAAG 2 cut(s) 158, 967
Eco88I CYCGRG 1 cut(s) 324
EcoICRI GAGCTC 1 cut(s) 799
EcoRI GAATTC 1 cut(s) 17
EcoRII CCWGG 3 cut(s) 287, 1039, 1180
EcoT14I CCWWGG 2 cut(s) 492, 1213
EcoT38I GRGCYC 1 cut(s) 801
ErhI CCWWGG 2 cut(s) 492, 1213
Esp3I CGTCTC 1 cut(s) 1239
FaeI CATG 5 cut(s) 28, 129, 625, 643, 943
FalI AAGNNNNNCTT 2 cut(s) 866, 898
FaqI GGGAC 3 cut(s) 401, 1057, 1134
FatI CATG 5 cut(s) 24, 125, 621, 639, 939
FauI CCCGC 4 cut(s) 62, 195, 232, 398
FbaI TGATCA 2 cut(s) 832, 1071
FblI GTMKAC 2 cut(s) 696, 1009
Fnu4HI GCNGC 9 cut(s) 111, 158, 181, 321, 367, 381, 634, 1159, 1281
FokI GGATG 3 cut(s) 1051, 1230, 1234
FriOI GRGCYC 1 cut(s) 801
Fsp4HI GCNGC 9 cut(s) 111, 158, 181, 321, 367, 381, 634, 1159, 1281
FspBI CTAG 3 cut(s) 1061, 1146, 1214
GlaI GCGC 4 cut(s) 515, 862, 864, 1162
GluI GCNGC 9 cut(s) 111, 158, 181, 321, 367, 381, 634, 1159, 1281
GsaI CCCAGC 3 cut(s) 387, 660, 1255
GsuI CTGGAG 3 cut(s) 343, 665, 955
HaeIII GGCC 5 cut(s) 183, 243, 261, 436, 599
HapII CCGG 4 cut(s) 171, 437, 754, 1028
HgaI GACGC 1 cut(s) 358
HhaI GCGC 4 cut(s) 516, 863, 865, 1163
Hin1I GRCGYC 2 cut(s) 369, 390
Hin1II CATG 5 cut(s) 28, 129, 625, 643, 943
Hin6I GCGC 4 cut(s) 514, 861, 863, 1161
HinP1I GCGC 4 cut(s) 514, 861, 863, 1161
HincII GTYRAC 2 cut(s) 574, 697
HindII GTYRAC 2 cut(s) 574, 697
HinfI GANTC 4 cut(s) 29, 150, 497, 1191
HpaII CCGG 4 cut(s) 171, 437, 754, 1028
HphI GGTGA 4 cut(s) 497, 593, 928, 1255
Hpy166II GTNNAC 6 cut(s) 90, 176, 505, 574, 697, 1010
Hpy188I TCNGA 5 cut(s) 58, 278, 530, 733, 1196
Hpy188III TCNNGA 5 cut(s) 326, 472, 883, 1035, 1124
Hpy8I GTNNAC 6 cut(s) 90, 176, 505, 574, 697, 1010
Hpy99I CGWCG 1 cut(s) 395
HpyAV CCTTC 3 cut(s) 324, 781, 905
HpyCH4III ACNGT 3 cut(s) 51, 554, 840
HpyCH4IV ACGT 2 cut(s) 353, 390
HpyCH4V TGCA 4 cut(s) 110, 380, 423, 766
HpyF10VI GCNNNNNNNGC 7 cut(s) 107, 163, 442, 475, 520, 1084, 1280
HpyF3I CTNAG 3 cut(s) 479, 663, 1088
HpySE526I ACGT 2 cut(s) 353, 390
Hsp92I GRCGYC 2 cut(s) 369, 390
Hsp92II CATG 5 cut(s) 28, 129, 625, 643, 943
HspAI GCGC 4 cut(s) 514, 861, 863, 1161
Ksp22I TGATCA 2 cut(s) 832, 1071
Kzo9I GATC 7 cut(s) 214, 346, 563, 832, 1002, 1071, 1260
LmnI GCTCC 3 cut(s) 228, 279, 796
Lsp1109I GCAGC 4 cut(s) 122, 392, 1145, 1267
LweI GCATC 5 cut(s) 465, 910, 1040, 1073, 1212
MaeI CTAG 3 cut(s) 1061, 1146, 1214
MaeII ACGT 2 cut(s) 353, 390
MaeIII GTNAC 2 cut(s) 542, 974
MalI GATC 7 cut(s) 216, 348, 565, 834, 1004, 1073, 1262
MbiI CCGCTC 1 cut(s) 323
MboI GATC 7 cut(s) 214, 346, 563, 832, 1002, 1071, 1260
MboII GAAGA 3 cut(s) 13, 151, 194
MfeI CAATTG 2 cut(s) 373, 509
MhlI GDGCHC 3 cut(s) 336, 471, 801
MlsI TGGCCA 1 cut(s) 599
MluCI AATT 8 cut(s) 17, 34, 102, 114, 373, 509, 1023, 1203
MluNI TGGCCA 1 cut(s) 599
MlyI GAGTC 1 cut(s) 491
MmeI TCCRAC 4 cut(s) 36, 301, 541, 1191
Mox20I TGGCCA 1 cut(s) 599
MscI TGGCCA 1 cut(s) 599
MslI CAYNNNNRTG 2 cut(s) 620, 704
Msp20I TGGCCA 1 cut(s) 599
MspA1I CMGCKG 4 cut(s) 69, 190, 383, 1158
MspI CCGG 4 cut(s) 171, 437, 754, 1028
MspR9I CCNGG 5 cut(s) 171, 289, 754, 1041, 1182
MunI CAATTG 2 cut(s) 373, 509
Mva1269I GAATGC 1 cut(s) 1147
MvaI CCWGG 3 cut(s) 289, 1041, 1182
MvnI CGCG 4 cut(s) 180, 366, 704, 863
MwoI GCNNNNNNNGC 7 cut(s) 107, 163, 442, 475, 520, 1084, 1280
NciI CCSGG 2 cut(s) 171, 754
NdeII GATC 7 cut(s) 214, 346, 563, 832, 1002, 1071, 1260
NlaIII CATG 5 cut(s) 28, 129, 625, 643, 943
NlaIV GGNNCC 4 cut(s) 6, 286, 637, 1211
NspI RCATGY 1 cut(s) 625
NspV TTCGAA 1 cut(s) 1189
PaeR7I CTCGAG 1 cut(s) 324
PauI GCGCGC 1 cut(s) 861
PciI ACATGT 1 cut(s) 621
PctI GAATGC 1 cut(s) 1147
PfeI GAWTC 3 cut(s) 29, 150, 1191
Pfl23II CGTACG 1 cut(s) 429
PkrI GCNGC 9 cut(s) 112, 159, 182, 322, 368, 382, 635, 1160, 1282
PleI GAGTC 1 cut(s) 491
PpsI GAGTC 1 cut(s) 491
PscI ACATGT 1 cut(s) 621
Psp124BI GAGCTC 1 cut(s) 801
Psp6I CCWGG 3 cut(s) 287, 1039, 1180
PspFI CCCAGC 3 cut(s) 383, 656, 1251
PspGI CCWGG 3 cut(s) 287, 1039, 1180
PspLI CGTACG 1 cut(s) 429
PspN4I GGNNCC 4 cut(s) 6, 286, 637, 1211
PspPI GGNCC 5 cut(s) 173, 241, 260, 434, 526
PstNI CAGNNNCTG 1 cut(s) 294
PteI GCGCGC 1 cut(s) 861
PvuII CAGCTG 1 cut(s) 383
RsaI GTAC 1 cut(s) 431
RsaNI GTAC 1 cut(s) 430
RseI CAYNNNNRTG 2 cut(s) 620, 704
SacI GAGCTC 1 cut(s) 801
SalI GTCGAC 1 cut(s) 695
SatI GCNGC 9 cut(s) 111, 158, 181, 321, 367, 381, 634, 1159, 1281
Sau3AI GATC 7 cut(s) 214, 346, 563, 832, 1002, 1071, 1260
Sau96I GGNCC 5 cut(s) 173, 241, 260, 434, 526
SchI GAGTC 1 cut(s) 491
ScrFI CCNGG 5 cut(s) 171, 289, 754, 1041, 1182
SduI GDGCHC 3 cut(s) 336, 471, 801
SfaNI GCATC 5 cut(s) 465, 910, 1040, 1073, 1212
SfcI CTRYAG 1 cut(s) 550
Sfr274I CTCGAG 1 cut(s) 324
SfuI TTCGAA 1 cut(s) 1189
SinI GGWCC 2 cut(s) 173, 526
SlaI CTCGAG 1 cut(s) 324
SmiMI CAYNNNNRTG 2 cut(s) 620, 704
SmlI CTYRAG 4 cut(s) 324, 470, 800, 1175
SmoI CTYRAG 4 cut(s) 324, 470, 800, 1175
Sse9I AATT 8 cut(s) 17, 34, 102, 114, 373, 509, 1023, 1203
SspI AATATT 1 cut(s) 727
SspMI CTAG 3 cut(s) 1061, 1146, 1214
SstI GAGCTC 1 cut(s) 801
StyD4I CCNGG 5 cut(s) 169, 287, 752, 1039, 1180
StyI CCWWGG 2 cut(s) 492, 1213
TaaI ACNGT 3 cut(s) 51, 554, 840
TaiI ACGT 2 cut(s) 356, 393
TaqI TCGA 5 cut(s) 325, 696, 1034, 1125, 1189
TasI AATT 8 cut(s) 17, 34, 102, 114, 373, 509, 1023, 1203
TauI GCSGC 5 cut(s) 160, 183, 323, 369, 636
TfiI GAWTC 3 cut(s) 29, 150, 1191
TscAI CASTG 2 cut(s) 54, 991
TseI GCWGC 4 cut(s) 110, 380, 1158, 1280
TspDTI ATGAA 4 cut(s) 13, 30, 800, 924
TspGWI ACGGA 4 cut(s) 199, 732, 1153, 1221
TspRI CASTG 2 cut(s) 54, 991
VpaK11BI GGWCC 2 cut(s) 173, 526
XapI RAATTY 2 cut(s) 17, 1023
XceI RCATGY 1 cut(s) 625
XhoI CTCGAG 1 cut(s) 324
XmaJI CCTAGG 1 cut(s) 1213
XmiI GTMKAC 2 cut(s) 696, 1009
XspI CTAG 3 cut(s) 1061, 1146, 1214
ZraI GACGTC 1 cut(s) 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.