Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012276.1

Orthogroup ID

OG0000377

Physical Location & Seq

Genomic Coordinates Reverse (-)

63850 .. 66380

Gene Structure 2531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012276.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ctgtacatccagaaattgcggatcggcagcggaagctcaccccctctgccgccgggtccacgtggcctcccactcgtcggaaaccttctctccctcgacccagatctccactcctacttcgccagcctcgcccacaaatacggcccaatctacaagctccggcttggcaccaagctctgcatcgtagtcacctccccttccgccgctcgcgtggtgctcaaagaccttgacgtcaccttcgccaaccgcgacgttggggccgcattgtacggcgggtccgacatagtctgctcctcgtacgggccggagctgcggatgttgagaaaagtgtgcgtgcaaaatttgtttaccaagaccaagttggattcggtccgcgagctccgtgggaagcaggtccgaaaatccgtgggtcaaatacacagtcggatcgggtcgccggtcaacctgggtgagcaaatgttttcgaccatgctcgacgtgagcactaatgtgctatggggcggcacggtggaggagggggccggatttgggactgcgtttcggaaagtgatgtcggagttgtgggagcttttagcaaggttaaatatttcggacctttatccgggtttggcccggtttgatttgcaaggtgtggcaaagaagatgaagggtttggaggtgaagtttgatgggatctttgaggcagtgattgatcaacggctgaggatggagaaacagggagcgaaagaggagagtaacgattttttgacttttctgttgcgggtgaaggatgatggagatgccgagacaccttttaccatgaccaacctcaaagccttactcatgaatatgattgtggctgggacagacacatcctccaacacaattgagtttgcaatggctgaaattatgaacaaacctgtagtgttagaaaaagcacagcaagaacttgaagctgtagttggtaaacacagaatcgttgaggagtctcatattcacaaactgccgtacttgactgcagtgatgaaagagactctgcgcttgcacccggtcgtgcctctattattcccacactgcccaggtgagacatgcactgtgggaggctataccattccaaaagggtctaggatttttattaatgtttgggctatacatagagacccttctagttgggaaaacccattggagtttgatccaactagattcttggatagtaaatgggattacagtgggagtgacttccagtactttccttttggttctgggagaagaatatgtataggaataccaatagctgagaggatggtgatgcacctgctagctacactgctgcattcttttgattggaaactgccacagggagagaggttggatctttcggagaagtttggtattgtactgaagaagaagatacctttggttgccatcccaactccaaggttattggatccagcactttacgaatcgccgacaaggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0016020 GO:0019748 GO:0042221 GO:0044550 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934

Pfam Domains

Protein Families

p450

Protein Analysis

485

Amino Acids

54.07

Weight (kDa)

8.82

Isoelectric Point (pI)

36.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca	FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica	MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica	Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis	pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis	RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata	RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora	Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii	Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa	Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha	Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana	Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1302
AasI	GACNNNNNNGTC	1 cut(s)	230
AatII	GACGTC	1 cut(s)	234
Acc36I	ACCTGC	2 cut(s)	382, 1302
AccB1I	GGYRCC	1 cut(s)	167
AccBSI	CCGCTC	1 cut(s)	206
AccII	CGCG	3 cut(s)	210, 249, 375
AclWI	GGATC	7 cut(s)	29, 434, 680, 1166, 1359, 1421, 1434
AcsI	RAATTY	1 cut(s)	340
AcuI	CTGAAG	1 cut(s)	1400
AcvI	CACGTG	1 cut(s)	62
AcyI	GRCGYC	1 cut(s)	231
AfaI	GTAC	6 cut(s)	5, 269, 299, 989, 1226, 1377
AfiI	CCNNNNNNNGG	4 cut(s)	77, 300, 528, 601
AgsI	TTSAA	1 cut(s)	932
AjiI	CACGTC	1 cut(s)	478
AjnI	CCWGG	2 cut(s)	444, 1057
AjuI	GAANNNNNNNTTGG	4 cut(s)	924, 956, 1379, 1411
AleI	CACNNNNGTG	1 cut(s)	488
AluBI	AGCT	9 cut(s)	36, 157, 175, 310, 379, 568, 935, 1274, 1301
AluI	AGCT	9 cut(s)	36, 157, 175, 310, 379, 568, 935, 1274, 1301
Alw21I	GWGCWC	3 cut(s)	219, 381, 485
Alw26I	GTCTC	5 cut(s)	779, 972, 1004, 1058, 1131
AlwI	GGATC	7 cut(s)	29, 434, 680, 1166, 1359, 1421, 1434
AoxI	GGCC	6 cut(s)	64, 142, 258, 302, 519, 609
ApeKI	GCWGC	3 cut(s)	27, 310, 1309
ApoI	RAATTY	1 cut(s)	340
ArsI	GACNNNNNNTTYG	4 cut(s)	221, 253, 406, 438
AseI	ATTAAT	1 cut(s)	1116
AspLEI	GCGC	1 cut(s)	1020
AsuC2I	CCSGG	4 cut(s)	54, 603, 613, 1028
AsuHPI	GGTGA	8 cut(s)	30, 181, 226, 461, 670, 775, 1073, 1297
AsuNHI	GCTAGC	1 cut(s)	1297
AvaII	GGWCC	5 cut(s)	56, 276, 370, 394, 592
BamHI	GGATCC	1 cut(s)	1426
BanI	GGYRCC	1 cut(s)	167
BanII	GRGCYC	1 cut(s)	381
BbrPI	CACGTG	1 cut(s)	62
Bbv12I	GWGCWC	3 cut(s)	219, 381, 485
BbvCI	CCTCAGC	1 cut(s)	701
BbvI	GCAGC	3 cut(s)	39, 297, 1296
BccI	CCATC	5 cut(s)	662, 700, 767, 1276, 1412
BceAI	ACGGC	4 cut(s)	157, 286, 713, 970
BciT130I	CCWGG	2 cut(s)	446, 1059
BclI	TGATCA	1 cut(s)	691
BcnI	CCSGG	4 cut(s)	54, 603, 613, 1028
BcoDI	GTCTC	5 cut(s)	779, 972, 1004, 1058, 1131
BfaI	CTAG	4 cut(s)	1104, 1146, 1179, 1298
BfmI	CTRYAG	3 cut(s)	900, 936, 996
BfuAI	ACCTGC	2 cut(s)	382, 1302
BglII	AGATCT	1 cut(s)	103
BisI	GCNGC	7 cut(s)	28, 50, 204, 261, 311, 502, 1310
BlsI	GCNGC	7 cut(s)	29, 51, 205, 262, 312, 503, 1311
BmcAI	AGTACT	1 cut(s)	1226
Bme1390I	CCNGG	6 cut(s)	54, 446, 603, 613, 1028, 1059
Bme18I	GGWCC	5 cut(s)	56, 276, 370, 394, 592
BmgBI	CACGTC	1 cut(s)	478
BmiI	GGNNCC	6 cut(s)	57, 169, 259, 277, 520, 1428
BmrFI	CCNGG	6 cut(s)	54, 446, 603, 613, 1028, 1059
BmsI	GCATC	3 cut(s)	189, 769, 1278
BmtI	GCTAGC	1 cut(s)	1301
Bpu10I	CCTNAGC	1 cut(s)	701
BpuMI	CCSGG	4 cut(s)	54, 603, 613, 1028
BsaAI	YACGTR	1 cut(s)	62
BsaHI	GRCGYC	1 cut(s)	231
BsaI	GGTCTC	1 cut(s)	1131
BsaJI	CCNNGG	5 cut(s)	382, 405, 445, 1057, 1415
BsaXI	ACNNNNNCTCC	8 cut(s)	51, 74, 81, 104, 647, 677, 839, 869
Bsc4I	CCNNNNNNNGG	4 cut(s)	77, 300, 528, 601
Bse118I	RCCGGY	1 cut(s)	436
Bse1I	ACTGG	1 cut(s)	1222
Bse3DI	GCAATG	1 cut(s)	882
BseBI	CCWGG	2 cut(s)	446, 1059
BseDI	CCNNGG	5 cut(s)	382, 405, 445, 1057, 1415
BseGI	GGATG	7 cut(s)	6, 321, 711, 775, 851, 1287, 1404
BseLI	CCNNNNNNNGG	4 cut(s)	77, 300, 528, 601
BseMI	GCAATG	1 cut(s)	882
BseMII	CTCAG	2 cut(s)	692, 1266
BseNI	ACTGG	1 cut(s)	1222
BseRI	GAGGAG	4 cut(s)	283, 527, 743, 977
BseXI	GCAGC	3 cut(s)	39, 297, 1296
BseYI	CCCAGC	1 cut(s)	839
Bsh1236I	CGCG	3 cut(s)	210, 249, 375
Bsh1285I	CGRYCG	1 cut(s)	1032
BshFI	GGCC	6 cut(s)	66, 144, 260, 304, 521, 611
BshNI	GGYRCC	1 cut(s)	167
BsiEI	CGRYCG	1 cut(s)	1032
BsiHKAI	GWGCWC	3 cut(s)	219, 381, 485
BsiSI	CCGG	8 cut(s)	53, 160, 305, 437, 522, 602, 613, 1028
BsiWI	CGTACG	1 cut(s)	297
BslFI	GGGAC	2 cut(s)	544, 856
BslI	CCNNNNNNNGG	4 cut(s)	77, 300, 528, 601
BsmAI	GTCTC	5 cut(s)	779, 972, 1004, 1058, 1131
BsmFI	GGGAC	2 cut(s)	544, 856
BsmI	GAATGC	1 cut(s)	1312
BsnI	GGCC	6 cut(s)	66, 144, 260, 304, 521, 611
Bso31I	GGTCTC	1 cut(s)	1131
Bsp1286I	GDGCHC	3 cut(s)	219, 381, 485
Bsp1407I	TGTACA	1 cut(s)	3
Bsp143I	GATC	8 cut(s)	21, 103, 426, 672, 691, 1171, 1351, 1426
BspANI	GGCC	6 cut(s)	66, 144, 260, 304, 521, 611
BspCNI	CTCAG	2 cut(s)	693, 1267
BspFNI	CGCG	3 cut(s)	210, 249, 375
BspHI	TCATGA	1 cut(s)	822
BspLI	GGNNCC	6 cut(s)	57, 169, 259, 277, 520, 1428
BspMAI	CTGCAG	1 cut(s)	1000
BspMI	ACCTGC	2 cut(s)	382, 1302
BspOI	GCTAGC	1 cut(s)	1301
BspPI	GGATC	7 cut(s)	29, 434, 680, 1166, 1359, 1421, 1434
BspT107I	GGYRCC	1 cut(s)	167
BspTNI	GGTCTC	1 cut(s)	1131
BsrBI	CCGCTC	1 cut(s)	206
BsrDI	GCAATG	1 cut(s)	882
BsrFI	RCCGGY	1 cut(s)	436
BsrGI	TGTACA	1 cut(s)	3
BsrI	ACTGG	1 cut(s)	1222
BssAI	RCCGGY	1 cut(s)	436
BssECI	CCNNGG	5 cut(s)	382, 405, 445, 1057, 1415
BssMI	GATC	8 cut(s)	21, 103, 426, 672, 691, 1171, 1351, 1426
BssNI	GRCGYC	1 cut(s)	231
BssT1I	CCWWGG	1 cut(s)	1415
Bst2UI	CCWGG	2 cut(s)	446, 1059
Bst4CI	ACNGT	4 cut(s)	422, 508, 1075, 1208
BstACI	GRCGYC	1 cut(s)	231
BstAUI	TGTACA	1 cut(s)	3
BstBAI	YACGTR	1 cut(s)	62
BstC8I	GCNNGC	6 cut(s)	124, 208, 335, 377, 1022, 1299
BstDEI	CTNAG	2 cut(s)	701, 1275
BstDSI	CCRYGG	2 cut(s)	382, 405
BstF5I	GGATG	7 cut(s)	6, 321, 711, 775, 851, 1287, 1404
BstFNI	CGCG	3 cut(s)	210, 249, 375
BstHHI	GCGC	1 cut(s)	1020
BstKTI	GATC	8 cut(s)	24, 106, 429, 675, 694, 1174, 1354, 1429
BstMAI	GTCTC	5 cut(s)	779, 972, 1004, 1058, 1131
BstMBI	GATC	8 cut(s)	21, 103, 426, 672, 691, 1171, 1351, 1426
BstMCI	CGRYCG	1 cut(s)	1032
BstMWI	GCNNNNNNNGC	3 cut(s)	33, 128, 310
BstNI	CCWGG	2 cut(s)	446, 1059
BstNSI	RCATGY	1 cut(s)	1071
BstSCI	CCNGG	6 cut(s)	52, 444, 601, 611, 1026, 1057
BstSFI	CTRYAG	3 cut(s)	900, 936, 996
BstUI	CGCG	3 cut(s)	210, 249, 375
BstV1I	GCAGC	3 cut(s)	39, 297, 1296
BstX2I	RGATCY	4 cut(s)	103, 672, 1351, 1426
BstYI	RGATCY	4 cut(s)	103, 672, 1351, 1426
BsuRI	GGCC	6 cut(s)	66, 144, 260, 304, 521, 611
BtgI	CCRYGG	2 cut(s)	382, 405
BtrI	CACGTC	1 cut(s)	478
BtsCI	GGATG	7 cut(s)	6, 321, 711, 775, 851, 1287, 1404
BtsI	GCAGTG	4 cut(s)	690, 1005, 1051, 1304
BtsIMutI	CAGTG	6 cut(s)	690, 1005, 1051, 1071, 1213, 1304
BveI	ACCTGC	2 cut(s)	382, 1302
Cac8I	GCNNGC	6 cut(s)	124, 208, 335, 377, 1022, 1299
CciI	TCATGA	1 cut(s)	822
CfoI	GCGC	1 cut(s)	1020
Cfr10I	RCCGGY	1 cut(s)	436
CpoI	CGGWCCG	1 cut(s)	370
Csp6I	GTAC	6 cut(s)	4, 268, 298, 988, 1225, 1376
CspI	CGGWCCG	1 cut(s)	370
CviAII	CATG	4 cut(s)	469, 799, 823, 1068
CviQI	GTAC	6 cut(s)	4, 268, 298, 988, 1225, 1376
DdeI	CTNAG	2 cut(s)	701, 1275
DpnI	GATC	8 cut(s)	23, 105, 428, 674, 693, 1173, 1353, 1428
DpnII	GATC	8 cut(s)	21, 103, 426, 672, 691, 1171, 1351, 1426
DrdI	GACNNNNNNGTC	1 cut(s)	230
DseDI	GACNNNNNNGTC	1 cut(s)	230
EciI	GGCGGA	1 cut(s)	190
Ecl136II	GAGCTC	1 cut(s)	379
Eco130I	CCWWGG	1 cut(s)	1415
Eco24I	GRGCYC	1 cut(s)	381
Eco31I	GGTCTC	1 cut(s)	1131
Eco47I	GGWCC	5 cut(s)	56, 276, 370, 394, 592
Eco53kI	GAGCTC	1 cut(s)	379
Eco57I	CTGAAG	1 cut(s)	1400
Eco72I	CACGTG	1 cut(s)	62
EcoICRI	GAGCTC	1 cut(s)	379
EcoRII	CCWGG	2 cut(s)	444, 1057
EcoT14I	CCWWGG	1 cut(s)	1415
EcoT38I	GRGCYC	1 cut(s)	381
ErhI	CCWWGG	1 cut(s)	1415
FaeI	CATG	4 cut(s)	472, 802, 826, 1071
FaqI	GGGAC	2 cut(s)	544, 856
FatI	CATG	4 cut(s)	468, 798, 822, 1067
FauI	CCCGC	2 cut(s)	266, 753
FbaI	TGATCA	1 cut(s)	691
Fnu4HI	GCNGC	7 cut(s)	28, 50, 204, 261, 311, 502, 1310
FokI	GGATG	6 cut(s)	328, 718, 782, 838, 1294, 1391
FriOI	GRGCYC	1 cut(s)	381
Fsp4HI	GCNGC	7 cut(s)	28, 50, 204, 261, 311, 502, 1310
FspBI	CTAG	4 cut(s)	1104, 1146, 1179, 1298
GlaI	GCGC	1 cut(s)	1019
GluI	GCNGC	7 cut(s)	28, 50, 204, 261, 311, 502, 1310
GsaI	CCCAGC	1 cut(s)	843
HaeIII	GGCC	6 cut(s)	66, 144, 260, 304, 521, 611
HapII	CCGG	8 cut(s)	53, 160, 305, 437, 522, 602, 613, 1028
HhaI	GCGC	1 cut(s)	1020
Hin1I	GRCGYC	1 cut(s)	231
Hin1II	CATG	4 cut(s)	472, 802, 826, 1071
Hin6I	GCGC	1 cut(s)	1018
HinP1I	GCGC	1 cut(s)	1018
HincII	GTYRAC	1 cut(s)	442
HindII	GTYRAC	1 cut(s)	442
HinfI	GANTC	6 cut(s)	365, 954, 965, 1012, 1182, 1442
HpaII	CCGG	8 cut(s)	53, 160, 305, 437, 522, 602, 613, 1028
HphI	GGTGA	8 cut(s)	30, 181, 226, 461, 670, 775, 1073, 1297
Hpy166II	GTNNAC	4 cut(s)	59, 348, 442, 947
Hpy188I	TCNGA	8 cut(s)	80, 280, 398, 426, 543, 556, 592, 1360
Hpy188III	TCNNGA	2 cut(s)	10, 823
Hpy8I	GTNNAC	4 cut(s)	59, 348, 442, 947
Hpy99I	CGWCG	3 cut(s)	80, 254, 479
HpyAV	CCTTC	6 cut(s)	95, 207, 247, 640, 760, 1152
HpyCH4III	ACNGT	4 cut(s)	422, 508, 1075, 1208
HpyCH4IV	ACGT	4 cut(s)	61, 231, 252, 477
HpyCH4V	TGCA	9 cut(s)	180, 337, 625, 875, 998, 1024, 1071, 1291, 1312
HpyF10VI	GCNNNNNNNGC	3 cut(s)	33, 128, 310
HpyF3I	CTNAG	2 cut(s)	701, 1275
HpySE526I	ACGT	4 cut(s)	61, 231, 252, 477
Hsp92I	GRCGYC	1 cut(s)	231
Hsp92II	CATG	4 cut(s)	472, 802, 826, 1071
HspAI	GCGC	1 cut(s)	1018
Ksp22I	TGATCA	1 cut(s)	691
Kzo9I	GATC	8 cut(s)	21, 103, 426, 672, 691, 1171, 1351, 1426
LmnI	GCTCC	6 cut(s)	162, 296, 307, 384, 565, 719
Lsp1109I	GCAGC	3 cut(s)	39, 297, 1296
LweI	GCATC	3 cut(s)	189, 769, 1278
MaeI	CTAG	4 cut(s)	1104, 1146, 1179, 1298
MaeII	ACGT	4 cut(s)	61, 231, 252, 477
MaeIII	GTNAC	4 cut(s)	187, 232, 734, 1214
MalI	GATC	8 cut(s)	23, 105, 428, 674, 693, 1173, 1353, 1428
MbiI	CCGCTC	1 cut(s)	206
MboI	GATC	8 cut(s)	21, 103, 426, 672, 691, 1171, 1351, 1426
MboII	GAAGA	5 cut(s)	652, 1260, 1393, 1396, 1399
MfeI	CAATTG	1 cut(s)	864
MflI	RGATCY	4 cut(s)	103, 672, 1351, 1426
MhlI	GDGCHC	3 cut(s)	219, 381, 485
MluCI	AATT	4 cut(s)	14, 340, 864, 885
MlyI	GAGTC	2 cut(s)	974, 1006
MmeI	TCCRAC	8 cut(s)	58, 303, 342, 404, 534, 882, 1199, 1329
MseI	TTAA	2 cut(s)	581, 1116
MslI	CAYNNNNRTG	2 cut(s)	488, 827
MspA1I	CMGCKG	1 cut(s)	30
MspI	CCGG	8 cut(s)	53, 160, 305, 437, 522, 602, 613, 1028
MspR9I	CCNGG	6 cut(s)	54, 446, 603, 613, 1028, 1059
MunI	CAATTG	1 cut(s)	864
Mva1269I	GAATGC	1 cut(s)	1312
MvaI	CCWGG	2 cut(s)	446, 1059
MvnI	CGCG	3 cut(s)	210, 249, 375
MwoI	GCNNNNNNNGC	3 cut(s)	33, 128, 310
NciI	CCSGG	4 cut(s)	54, 603, 613, 1028
NdeII	GATC	8 cut(s)	21, 103, 426, 672, 691, 1171, 1351, 1426
NheI	GCTAGC	1 cut(s)	1297
NlaIII	CATG	4 cut(s)	472, 802, 826, 1071
NlaIV	GGNNCC	6 cut(s)	57, 169, 259, 277, 520, 1428
NmeAIII	GCCGAG	1 cut(s)	808
NmuCI	GTSAC	3 cut(s)	187, 232, 1214
NspI	RCATGY	1 cut(s)	1071
OliI	CACNNNNGTG	1 cut(s)	488
PagI	TCATGA	1 cut(s)	822
PaqCI	CACCTGC	1 cut(s)	1302
PcsI	WCGNNNNNNNCGW	2 cut(s)	246, 276
PctI	GAATGC	1 cut(s)	1312
PfeI	GAWTC	4 cut(s)	365, 954, 1182, 1442
Pfl23II	CGTACG	1 cut(s)	297
PflFI	GACNNNGTC	1 cut(s)	284
PkrI	GCNGC	7 cut(s)	29, 51, 205, 262, 312, 503, 1311
PleI	GAGTC	2 cut(s)	973, 1006
PmaCI	CACGTG	1 cut(s)	62
PmlI	CACGTG	1 cut(s)	62
PpsI	GAGTC	2 cut(s)	973, 1006
Ppu21I	YACGTR	1 cut(s)	62
PshBI	ATTAAT	1 cut(s)	1116
Psp124BI	GAGCTC	1 cut(s)	381
Psp6I	CCWGG	2 cut(s)	444, 1057
PspCI	CACGTG	1 cut(s)	62
PspFI	CCCAGC	1 cut(s)	839
PspGI	CCWGG	2 cut(s)	444, 1057
PspLI	CGTACG	1 cut(s)	297
PspN4I	GGNNCC	6 cut(s)	57, 169, 259, 277, 520, 1428
PstI	CTGCAG	1 cut(s)	1000
PsuI	RGATCY	4 cut(s)	103, 672, 1351, 1426
PsyI	GACNNNGTC	1 cut(s)	284
RsaI	GTAC	6 cut(s)	5, 269, 299, 989, 1226, 1377
RsaNI	GTAC	6 cut(s)	4, 268, 298, 988, 1225, 1376
RseI	CAYNNNNRTG	2 cut(s)	488, 827
Rsr2I	CGGWCCG	1 cut(s)	370
RsrII	CGGWCCG	1 cut(s)	370
SacI	GAGCTC	1 cut(s)	381
SaqAI	TTAA	2 cut(s)	581, 1116
SatI	GCNGC	7 cut(s)	28, 50, 204, 261, 311, 502, 1310
Sau3AI	GATC	8 cut(s)	21, 103, 426, 672, 691, 1171, 1351, 1426
ScaI	AGTACT	1 cut(s)	1226
SchI	GAGTC	2 cut(s)	974, 1006
ScrFI	CCNGG	6 cut(s)	54, 446, 603, 613, 1028, 1059
SduI	GDGCHC	3 cut(s)	219, 381, 485
SfaNI	GCATC	3 cut(s)	189, 769, 1278
SfcI	CTRYAG	3 cut(s)	900, 936, 996
SinI	GGWCC	5 cut(s)	56, 276, 370, 394, 592
SmiMI	CAYNNNNRTG	2 cut(s)	488, 827
Sse9I	AATT	4 cut(s)	14, 340, 864, 885
SspI	AATATT	1 cut(s)	586
SspMI	CTAG	4 cut(s)	1104, 1146, 1179, 1298
SstI	GAGCTC	1 cut(s)	381
StyD4I	CCNGG	6 cut(s)	52, 444, 601, 611, 1026, 1057
StyI	CCWWGG	1 cut(s)	1415
TaaI	ACNGT	4 cut(s)	422, 508, 1075, 1208
TaiI	ACGT	4 cut(s)	64, 234, 255, 480
TaqI	TCGA	3 cut(s)	96, 464, 474
TaqII	GACCGA	1 cut(s)	358
TasI	AATT	4 cut(s)	14, 340, 864, 885
TatI	WGTACW	3 cut(s)	3, 1224, 1375
TauI	GCSGC	4 cut(s)	52, 206, 263, 504
TfiI	GAWTC	4 cut(s)	365, 954, 1182, 1442
Tru1I	TTAA	2 cut(s)	581, 1116
Tru9I	TTAA	2 cut(s)	581, 1116
TscAI	CASTG	6 cut(s)	690, 1005, 1058, 1078, 1213, 1311
TseFI	GTSAC	3 cut(s)	187, 232, 1214
TseI	GCWGC	3 cut(s)	27, 310, 1309
Tsp45I	GTSAC	3 cut(s)	187, 232, 1214
TspDTI	ATGAA	4 cut(s)	659, 839, 905, 1019
TspGWI	ACGGA	2 cut(s)	371, 394
TspRI	CASTG	6 cut(s)	690, 1005, 1058, 1078, 1213, 1311
Tth111I	GACNNNGTC	1 cut(s)	284
VpaK11BI	GGWCC	5 cut(s)	56, 276, 370, 394, 592
VspI	ATTAAT	1 cut(s)	1116
XapI	RAATTY	1 cut(s)	340
XceI	RCATGY	1 cut(s)	1071
XcmI	CCANNNNNNNNNTGG	1 cut(s)	358
XspI	CTAG	4 cut(s)	1104, 1146, 1179, 1298
ZraI	GACGTC	1 cut(s)	232
ZrmI	AGTACT	1 cut(s)	1226

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.