Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000637.1

Orthogroup ID

OG0000377

Physical Location & Seq

Genomic Coordinates Reverse (-)

107395 .. 110501

Gene Structure 3107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000637.1_g000025.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

atgtcgccgccgttgcctcctggtccccgtggcttcccaccggttggtaaccttctgtcccttgactcagagctccattcctactttgctggcctagccaagacctacggcccaatctttaagctacgactgggtaccaggctctgcgtcgtaatagcctccccttccatcgctcgagaggtcctcaaggaccatgacgccacgttcgccaatcgcggcgtcaatgttgcagctggggacgtcgcactctacggcggggcagatatagtttttgccccttacgggccggagtggcgaatgatgaggaaagtgtgcgcgctcaagatgcttagcaacaccgccttggactcggttcaagaactgcgccacaagcaagtccgaaaagctgtgggttacttctatagtcgggtcgggtcccccgtcgacgttggtgagcaacttttcgtggccattctcaatcttaccaccaacatgttatggggtggcaccatggaggaggagggggtcggggctggggttttggccgagtttagggaagcaatgcgggacatcgcggagctttctgggaaacccaatatttcggaactttatccgggtttggcccggtttgatttgcaggggatagcgaagcagatgaaggatgtggagcttaggtttgataggatttttgagaaagttatcaatcaaaggttgacgatgcagaaagaaggcgcgaaagagagcaatgatttcttgacatttctattgcgatctatagatgaaggaggagacggcaaaactcctctgaccatgacacatctcaaagccatgctcttggggtctaggatttttgttaatgtgtgggatatccatagagactcttctaactggaaaaacccattagagtttaatccagagaggttcttgaatggtaagtatgactacactggaagtgacttcaactattttccatttgggagtggaaaaagaatatgtccagggatagcaacggcagagaggcttgtcatgcatttacttgcatcactgttgcattcttttgactggaaactaccacaaggagagacgaagttagatgtttccgagaagtttggccttgtgatgaagaagaaggtacctatggttgccatcccaactccaaggttattggattcagaactttatcaacagcccaaccaccaccatcgtgcttccaatcccatcacgccgttgcttgcagatcccaacctccggcgaagtcacgtcgtcgatcagcaccgcaaactgccctccactgcacgcaccgaagcccgtccatccctgctcgtcgccctcctccgcttctgcctgtgtcgacactgccgccagccaaagccatggcctaaggagcccatacagccccaaccgtcgctagctcacatcgtcaacccatccggccgcactcgacgaccgccggcgaggccagaagacatcgtcagcgtcgaggcgcagccggacaggcacagtcggcaccttttctctcaaagttctctctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0016020 GO:0019748 GO:0042221 GO:0044550 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934

Pfam Domains

Protein Families

p450

Protein Analysis

503

Amino Acids

56.39

Weight (kDa)

9.4

Isoelectric Point (pI)

43.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca	FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica	MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica	Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis	pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis	RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata	RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora	Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii	Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa	Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha	Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana	Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	243
Acc65I	GGTACC	2 cut(s)	134, 1111
AccB1I	GGYRCC	4 cut(s)	134, 485, 1111, 1485
AccB7I	CCANNNNNTGG	1 cut(s)	44
AccI	GTMKAC	2 cut(s)	423, 1330
AccII	CGCG	4 cut(s)	216, 317, 554, 713
AclWI	GGATC	1 cut(s)	1211
AcoI	YGGCCR	3 cut(s)	447, 522, 1411
AcyI	GRCGYC	3 cut(s)	198, 219, 240
AfaI	GTAC	2 cut(s)	136, 1113
AfiI	CCNNNNNNNGG	4 cut(s)	44, 282, 531, 1227
AflIII	ACRYGT	1 cut(s)	471
AgeI	ACCGGT	1 cut(s)	40
AgsI	TTSAA	3 cut(s)	356, 907, 940
AjiI	CACGTC	1 cut(s)	1240
AjnI	CCWGG	3 cut(s)	19, 137, 976
AleI	CACNNNNGTG	1 cut(s)	1182
AluBI	AGCT	7 cut(s)	73, 124, 233, 386, 559, 649, 1391
AluI	AGCT	7 cut(s)	73, 124, 233, 386, 559, 649, 1391
Alw21I	GWGCWC	1 cut(s)	75
Alw26I	GTCTC	3 cut(s)	762, 849, 1055
AlwI	GGATC	1 cut(s)	1211
AlwNI	CAGNNNCTG	1 cut(s)	144
Ama87I	CYCGRG	1 cut(s)	174
ApeKI	GCWGC	2 cut(s)	230, 1465
ArsI	GACNNNNNNTTYG	2 cut(s)	188, 220
AsiGI	ACCGGT	1 cut(s)	40
Asp718I	GGTACC	2 cut(s)	134, 1111
AspLEI	GCGC	5 cut(s)	317, 319, 366, 713, 1465
AspS9I	GGNCC	7 cut(s)	23, 110, 181, 190, 284, 414, 601
AsuC2I	CCSGG	2 cut(s)	594, 604
AsuHPI	GGTGA	1 cut(s)	443
AsuNHI	GCTAGC	1 cut(s)	1387
AvaI	CYCGRG	1 cut(s)	174
AvaII	GGWCC	4 cut(s)	23, 181, 190, 414
AxyI	CCTNAGG	1 cut(s)	1359
BalI	TGGCCA	1 cut(s)	449
BanI	GGYRCC	4 cut(s)	134, 485, 1111, 1485
BanII	GRGCYC	2 cut(s)	75, 1368
BbsI	GAAGAC	1 cut(s)	1449
Bbv12I	GWGCWC	1 cut(s)	75
BbvI	GCAGC	2 cut(s)	242, 1477
BccI	CCATC	6 cut(s)	176, 1133, 1188, 1205, 1300, 1414
BceAI	ACGGC	5 cut(s)	124, 268, 787, 1005, 1189
BciT130I	CCWGG	3 cut(s)	21, 139, 978
BcnI	CCSGG	2 cut(s)	594, 604
BcoDI	GTCTC	3 cut(s)	762, 849, 1055
BfaI	CTAG	4 cut(s)	95, 822, 1388, 1510
BfmI	CTRYAG	2 cut(s)	400, 753
BglI	GCCNNNNNGGC	3 cut(s)	292, 1435, 1474
BisI	GCNGC	6 cut(s)	8, 217, 231, 1339, 1414, 1466
BlpI	GCTNAGC	1 cut(s)	329
BlsI	GCNGC	6 cut(s)	9, 218, 232, 1340, 1415, 1467
Bme1390I	CCNGG	5 cut(s)	21, 139, 594, 604, 978
Bme18I	GGWCC	4 cut(s)	23, 181, 190, 414
BmeT110I	CYCGRG	1 cut(s)	174
BmgBI	CACGTC	1 cut(s)	1240
BmgT120I	GGNCC	7 cut(s)	23, 110, 181, 190, 284, 414, 601
BmiI	GGNNCC	8 cut(s)	25, 136, 415, 416, 487, 1113, 1365, 1487
BmrFI	CCNGG	5 cut(s)	21, 139, 594, 604, 978
BmrI	ACTGGG	1 cut(s)	140
BmsI	GCATC	3 cut(s)	315, 687, 1028
BmtI	GCTAGC	1 cut(s)	1391
BmuI	ACTGGG	1 cut(s)	140
BpiI	GAAGAC	1 cut(s)	1449
BplI	GAGNNNNNCTC	2 cut(s)	168, 200
Bpu10I	CCTNAGC	1 cut(s)	650
Bpu1102I	GCTNAGC	1 cut(s)	329
BpuEI	CTTGAG	2 cut(s)	170, 305
BpuMI	CCSGG	2 cut(s)	594, 604
BsaHI	GRCGYC	3 cut(s)	198, 219, 240
BsaJI	CCNNGG	6 cut(s)	28, 342, 489, 977, 1136, 1352
BsaWI	WCCGGW	1 cut(s)	40
BsaXI	ACNNNNNCTCC	2 cut(s)	638, 668
Bsc4I	CCNNNNNNNGG	4 cut(s)	44, 282, 531, 1227
Bse118I	RCCGGY	2 cut(s)	40, 1429
Bse1I	ACTGG	4 cut(s)	135, 872, 931, 1046
Bse21I	CCTNAGG	1 cut(s)	1359
Bse3DI	GCAATG	2 cut(s)	546, 730
BseBI	CCWGG	3 cut(s)	21, 139, 978
BseDI	CCNNGG	6 cut(s)	28, 342, 489, 977, 1136, 1352
BseGI	GGATG	4 cut(s)	646, 1125, 1292, 1406
BseLI	CCNNNNNNNGG	4 cut(s)	44, 282, 531, 1227
BseMI	GCAATG	2 cut(s)	546, 730
BseMII	CTCAG	1 cut(s)	81
BseNI	ACTGG	4 cut(s)	135, 872, 931, 1046
BsePI	GCGCGC	1 cut(s)	315
BseRI	GAGGAG	5 cut(s)	509, 512, 771, 780, 1301
BseX3I	CGGCCG	1 cut(s)	1411
BseXI	GCAGC	2 cut(s)	242, 1477
BseYI	CCCAGC	2 cut(s)	233, 512
BsgI	GTGCAG	1 cut(s)	1257
Bsh1236I	CGCG	4 cut(s)	216, 317, 554, 713
Bsh1285I	CGRYCG	2 cut(s)	1414, 1427
BshNI	GGYRCC	4 cut(s)	134, 485, 1111, 1485
BshTI	ACCGGT	1 cut(s)	40
BsiEI	CGRYCG	2 cut(s)	1414, 1427
BsiHKAI	GWGCWC	1 cut(s)	75
BsiHKCI	CYCGRG	1 cut(s)	174
BsiSI	CCGG	8 cut(s)	41, 287, 593, 604, 1228, 1410, 1430, 1469
BslFI	GGGAC	5 cut(s)	9, 43, 251, 400, 560
BslI	CCNNNNNNNGG	4 cut(s)	44, 282, 531, 1227
BsmAI	GTCTC	3 cut(s)	762, 849, 1055
BsmBI	CGTCTC	2 cut(s)	762, 1055
BsmFI	GGGAC	5 cut(s)	9, 43, 251, 400, 560
BsmI	GAATGC	1 cut(s)	1030
BsoBI	CYCGRG	1 cut(s)	174
Bsp1286I	GDGCHC	2 cut(s)	75, 1368
Bsp143I	GATC	3 cut(s)	749, 1216, 1246
Bsp1720I	GCTNAGC	1 cut(s)	329
Bsp19I	CCATGG	2 cut(s)	489, 1352
BspCNI	CTCAG	1 cut(s)	80
BspFNI	CGCG	4 cut(s)	216, 317, 554, 713
BspLI	GGNNCC	8 cut(s)	25, 136, 415, 416, 487, 1113, 1365, 1487
BspOI	GCTAGC	1 cut(s)	1391
BspPI	GGATC	1 cut(s)	1211
BspT107I	GGYRCC	4 cut(s)	134, 485, 1111, 1485
BsrDI	GCAATG	2 cut(s)	546, 730
BsrFI	RCCGGY	2 cut(s)	40, 1429
BsrI	ACTGG	4 cut(s)	135, 872, 931, 1046
BssAI	RCCGGY	2 cut(s)	40, 1429
BssECI	CCNNGG	6 cut(s)	28, 342, 489, 977, 1136, 1352
BssHII	GCGCGC	1 cut(s)	315
BssMI	GATC	3 cut(s)	749, 1216, 1246
BssNI	GRCGYC	3 cut(s)	198, 219, 240
BssT1I	CCWWGG	4 cut(s)	342, 489, 1136, 1352
Bst2UI	CCWGG	3 cut(s)	21, 139, 978
Bst4CI	ACNGT	3 cut(s)	1026, 1383, 1481
Bst6I	CTCTTC	1 cut(s)	865
BstACI	GRCGYC	3 cut(s)	198, 219, 240
BstC8I	GCNNGC	7 cut(s)	91, 317, 1212, 1276, 1343, 1389, 1431
BstDEI	CTNAG	4 cut(s)	67, 329, 650, 1359
BstDSI	CCRYGG	3 cut(s)	28, 489, 1352
BstEII	GGTNACC	1 cut(s)	47
BstF5I	GGATG	4 cut(s)	646, 1125, 1292, 1406
BstFNI	CGCG	4 cut(s)	216, 317, 554, 713
BstHHI	GCGC	5 cut(s)	317, 319, 366, 713, 1465
BstKTI	GATC	3 cut(s)	752, 1219, 1249
BstMAI	GTCTC	3 cut(s)	762, 849, 1055
BstMBI	GATC	3 cut(s)	749, 1216, 1246
BstMCI	CGRYCG	2 cut(s)	1414, 1427
BstNI	CCWGG	3 cut(s)	21, 139, 978
BstNSI	RCATGY	1 cut(s)	475
BstPI	GGTNACC	1 cut(s)	47
BstSCI	CCNGG	5 cut(s)	19, 137, 592, 602, 976
BstSFI	CTRYAG	2 cut(s)	400, 753
BstUI	CGCG	4 cut(s)	216, 317, 554, 713
BstV1I	GCAGC	2 cut(s)	242, 1477
BstV2I	GAAGAC	1 cut(s)	1449
BstX2I	RGATCY	1 cut(s)	1216
BstXI	CCANNNNNNTGG	2 cut(s)	814, 1353
BstYI	RGATCY	1 cut(s)	1216
BstZI	CGGCCG	1 cut(s)	1411
Bsu36I	CCTNAGG	1 cut(s)	1359
BtgI	CCRYGG	3 cut(s)	28, 489, 1352
BtgZI	GCGATG	2 cut(s)	154, 535
BtrI	CACGTC	1 cut(s)	1240
BtsCI	GGATG	4 cut(s)	646, 1125, 1292, 1406
BtsI	GCAGTG	2 cut(s)	1269, 1333
BtsIMutI	CAGTG	4 cut(s)	924, 1022, 1269, 1333
Cac8I	GCNNGC	7 cut(s)	91, 317, 1212, 1276, 1343, 1389, 1431
CaiI	CAGNNNCTG	1 cut(s)	144
CfoI	GCGC	5 cut(s)	317, 319, 366, 713, 1465
Cfr10I	RCCGGY	2 cut(s)	40, 1429
Cfr13I	GGNCC	7 cut(s)	23, 110, 181, 190, 284, 414, 601
CseI	GACGC	4 cut(s)	136, 206, 208, 1444
Csp6I	GTAC	2 cut(s)	135, 1112
CspAI	ACCGGT	1 cut(s)	40
CviAII	CATG	7 cut(s)	194, 472, 490, 790, 808, 1006, 1353
CviQI	GTAC	2 cut(s)	135, 1112
DdeI	CTNAG	4 cut(s)	67, 329, 650, 1359
DpnI	GATC	3 cut(s)	751, 1218, 1248
DpnII	GATC	3 cut(s)	749, 1216, 1246
EaeI	YGGCCR	3 cut(s)	447, 522, 1411
EagI	CGGCCG	1 cut(s)	1411
Eam1104I	CTCTTC	1 cut(s)	865
EarI	CTCTTC	1 cut(s)	865
Ecl136II	GAGCTC	1 cut(s)	73
EclXI	CGGCCG	1 cut(s)	1411
Eco130I	CCWWGG	4 cut(s)	342, 489, 1136, 1352
Eco24I	GRGCYC	2 cut(s)	75, 1368
Eco32I	GATATC	1 cut(s)	847
Eco47I	GGWCC	4 cut(s)	23, 181, 190, 414
Eco53kI	GAGCTC	1 cut(s)	73
Eco81I	CCTNAGG	1 cut(s)	1359
Eco88I	CYCGRG	1 cut(s)	174
Eco91I	GGTNACC	1 cut(s)	47
EcoICRI	GAGCTC	1 cut(s)	73
EcoO109I	RGGNCCY	2 cut(s)	181, 414
EcoO65I	GGTNACC	1 cut(s)	47
EcoRII	CCWGG	3 cut(s)	19, 137, 976
EcoRV	GATATC	1 cut(s)	847
EcoT14I	CCWWGG	4 cut(s)	342, 489, 1136, 1352
EcoT22I	ATGCAT	1 cut(s)	1011
EcoT38I	GRGCYC	2 cut(s)	75, 1368
ErhI	CCWWGG	4 cut(s)	342, 489, 1136, 1352
Esp3I	CGTCTC	2 cut(s)	762, 1055
FaeI	CATG	7 cut(s)	197, 475, 493, 793, 811, 1009, 1356
FaqI	GGGAC	5 cut(s)	9, 43, 251, 400, 560
FatI	CATG	7 cut(s)	193, 471, 489, 789, 807, 1005, 1352
FauI	CCCGC	2 cut(s)	248, 537
FblI	GTMKAC	2 cut(s)	423, 1330
Fnu4HI	GCNGC	6 cut(s)	8, 217, 231, 1339, 1414, 1466
FokI	GGATG	4 cut(s)	653, 1112, 1279, 1393
FriOI	GRGCYC	2 cut(s)	75, 1368
Fsp4HI	GCNGC	6 cut(s)	8, 217, 231, 1339, 1414, 1466
FspBI	CTAG	4 cut(s)	95, 822, 1388, 1510
GlaI	GCGC	5 cut(s)	316, 318, 365, 712, 1464
GluI	GCNGC	6 cut(s)	8, 217, 231, 1339, 1414, 1466
GsaI	CCCAGC	2 cut(s)	237, 516
HapII	CCGG	8 cut(s)	41, 287, 593, 604, 1228, 1410, 1430, 1469
HgaI	GACGC	4 cut(s)	136, 206, 208, 1444
HhaI	GCGC	5 cut(s)	317, 319, 366, 713, 1465
Hin1I	GRCGYC	3 cut(s)	198, 219, 240
Hin1II	CATG	7 cut(s)	197, 475, 493, 793, 811, 1009, 1356
Hin6I	GCGC	5 cut(s)	315, 317, 364, 711, 1463
HinP1I	GCGC	5 cut(s)	315, 317, 364, 711, 1463
HincII	GTYRAC	4 cut(s)	424, 693, 1331, 1402
HindII	GTYRAC	4 cut(s)	424, 693, 1331, 1402
HinfI	GANTC	4 cut(s)	65, 347, 857, 1148
HpaII	CCGG	8 cut(s)	41, 287, 593, 604, 1228, 1410, 1430, 1469
HphI	GGTGA	1 cut(s)	443
Hpy166II	GTNNAC	4 cut(s)	424, 693, 1331, 1402
Hpy188I	TCNGA	6 cut(s)	70, 380, 583, 786, 1081, 1153
Hpy188III	TCNNGA	6 cut(s)	176, 322, 356, 733, 893, 904
Hpy8I	GTNNAC	4 cut(s)	424, 693, 1331, 1402
HpyAV	CCTTC	6 cut(s)	62, 174, 631, 701, 755, 1102
HpyCH4III	ACNGT	3 cut(s)	1026, 1383, 1481
HpyCH4IV	ACGT	4 cut(s)	203, 240, 426, 1239
HpyCH4V	TGCA	8 cut(s)	230, 616, 700, 1009, 1019, 1030, 1214, 1274
HpyF3I	CTNAG	4 cut(s)	67, 329, 650, 1359
HpySE526I	ACGT	4 cut(s)	203, 240, 426, 1239
Hsp92I	GRCGYC	3 cut(s)	198, 219, 240
Hsp92II	CATG	7 cut(s)	197, 475, 493, 793, 811, 1009, 1356
HspAI	GCGC	5 cut(s)	315, 317, 364, 711, 1463
KflI	GGGWCCC	1 cut(s)	414
KpnI	GGTACC	2 cut(s)	138, 1115
KroI	GCCGGC	1 cut(s)	1429
KroNI	GCCGGC	1 cut(s)	1431
Kzo9I	GATC	3 cut(s)	749, 1216, 1246
LmnI	GCTCC	4 cut(s)	78, 556, 646, 1363
Lsp1109I	GCAGC	2 cut(s)	242, 1477
LweI	GCATC	3 cut(s)	315, 687, 1028
MaeI	CTAG	4 cut(s)	95, 822, 1388, 1510
MaeII	ACGT	4 cut(s)	203, 240, 426, 1239
MaeIII	GTNAC	4 cut(s)	47, 392, 932, 1235
MalI	GATC	3 cut(s)	751, 1218, 1248
MboI	GATC	3 cut(s)	749, 1216, 1246
MboII	GAAGA	4 cut(s)	852, 1114, 1117, 1454
MflI	RGATCY	1 cut(s)	1216
MhlI	GDGCHC	2 cut(s)	75, 1368
MlsI	TGGCCA	1 cut(s)	449
MluNI	TGGCCA	1 cut(s)	449
MlyI	GAGTC	3 cut(s)	59, 341, 851
Mox20I	TGGCCA	1 cut(s)	449
Mph1103I	ATGCAT	1 cut(s)	1011
MreI	CGCCGGCG	1 cut(s)	1429
MroNI	GCCGGC	1 cut(s)	1429
MscI	TGGCCA	1 cut(s)	449
MseI	TTAA	3 cut(s)	120, 834, 888
MslI	CAYNNNNRTG	2 cut(s)	470, 1182
Msp20I	TGGCCA	1 cut(s)	449
MspA1I	CMGCKG	1 cut(s)	233
MspI	CCGG	8 cut(s)	41, 287, 593, 604, 1228, 1410, 1430, 1469
MspR9I	CCNGG	5 cut(s)	21, 139, 594, 604, 978
Mva1269I	GAATGC	1 cut(s)	1030
MvaI	CCWGG	3 cut(s)	21, 139, 978
MvnI	CGCG	4 cut(s)	216, 317, 554, 713
NaeI	GCCGGC	1 cut(s)	1431
NciI	CCSGG	2 cut(s)	594, 604
NcoI	CCATGG	2 cut(s)	489, 1352
NdeII	GATC	3 cut(s)	749, 1216, 1246
NgoMIV	GCCGGC	1 cut(s)	1429
NheI	GCTAGC	1 cut(s)	1387
NlaIII	CATG	7 cut(s)	197, 475, 493, 793, 811, 1009, 1356
NlaIV	GGNNCC	8 cut(s)	25, 136, 415, 416, 487, 1113, 1365, 1487
NmeAIII	GCCGAG	1 cut(s)	550
NmuCI	GTSAC	2 cut(s)	932, 1235
NsiI	ATGCAT	1 cut(s)	1011
NspI	RCATGY	1 cut(s)	475
OliI	CACNNNNGTG	1 cut(s)	1182
PaeR7I	CTCGAG	1 cut(s)	174
PauI	GCGCGC	1 cut(s)	315
PciI	ACATGT	1 cut(s)	471
PcsI	WCGNNNNNNNCGW	2 cut(s)	417, 1455
PctI	GAATGC	1 cut(s)	1030
PdiI	GCCGGC	1 cut(s)	1431
PfeI	GAWTC	1 cut(s)	1148
PflFI	GACNNNGTC	1 cut(s)	1448
PflMI	CCANNNNNTGG	1 cut(s)	44
PinAI	ACCGGT	1 cut(s)	40
PkrI	GCNGC	6 cut(s)	9, 218, 232, 1340, 1415, 1467
PleI	GAGTC	3 cut(s)	59, 341, 851
PpsI	GAGTC	3 cut(s)	59, 341, 851
PpuMI	RGGWCCY	2 cut(s)	181, 414
PscI	ACATGT	1 cut(s)	471
Psp124BI	GAGCTC	1 cut(s)	75
Psp5II	RGGWCCY	2 cut(s)	181, 414
Psp6I	CCWGG	3 cut(s)	19, 137, 976
PspEI	GGTNACC	1 cut(s)	47
PspFI	CCCAGC	2 cut(s)	233, 512
PspGI	CCWGG	3 cut(s)	19, 137, 976
PspN4I	GGNNCC	8 cut(s)	25, 136, 415, 416, 487, 1113, 1365, 1487
PspPI	GGNCC	7 cut(s)	23, 110, 181, 190, 284, 414, 601
PspPPI	RGGWCCY	2 cut(s)	181, 414
PstNI	CAGNNNCTG	1 cut(s)	144
PsuI	RGATCY	1 cut(s)	1216
PsyI	GACNNNGTC	1 cut(s)	1448
PteI	GCGCGC	1 cut(s)	315
PvuII	CAGCTG	1 cut(s)	233
RsaI	GTAC	2 cut(s)	136, 1113
RsaNI	GTAC	2 cut(s)	135, 1112
RseI	CAYNNNNRTG	2 cut(s)	470, 1182
SacI	GAGCTC	1 cut(s)	75
SalI	GTCGAC	2 cut(s)	422, 1329
SaqAI	TTAA	3 cut(s)	120, 834, 888
SatI	GCNGC	6 cut(s)	8, 217, 231, 1339, 1414, 1466
Sau3AI	GATC	3 cut(s)	749, 1216, 1246
Sau96I	GGNCC	7 cut(s)	23, 110, 181, 190, 284, 414, 601
SchI	GAGTC	3 cut(s)	59, 341, 851
ScrFI	CCNGG	5 cut(s)	21, 139, 594, 604, 978
SduI	GDGCHC	2 cut(s)	75, 1368
SfaNI	GCATC	3 cut(s)	315, 687, 1028
SfcI	CTRYAG	2 cut(s)	400, 753
Sfr274I	CTCGAG	1 cut(s)	174
SgrAI	CRCCGGYG	1 cut(s)	1429
SgrDI	CGTCGACG	1 cut(s)	422
SinI	GGWCC	4 cut(s)	23, 181, 190, 414
SlaI	CTCGAG	1 cut(s)	174
SmiMI	CAYNNNNRTG	2 cut(s)	470, 1182
SmlI	CTYRAG	3 cut(s)	174, 185, 320
SmoI	CTYRAG	3 cut(s)	174, 185, 320
SspI	AATATT	1 cut(s)	577
SspMI	CTAG	4 cut(s)	95, 822, 1388, 1510
SstI	GAGCTC	1 cut(s)	75
StyD4I	CCNGG	5 cut(s)	19, 137, 592, 602, 976
StyI	CCWWGG	4 cut(s)	342, 489, 1136, 1352
TaaI	ACNGT	3 cut(s)	1026, 1383, 1481
TaiI	ACGT	4 cut(s)	206, 243, 429, 1242
TaqI	TCGA	6 cut(s)	175, 423, 1245, 1330, 1420, 1458
TauI	GCSGC	4 cut(s)	10, 219, 1341, 1416
TfiI	GAWTC	1 cut(s)	1148
Tru1I	TTAA	3 cut(s)	120, 834, 888
Tru9I	TTAA	3 cut(s)	120, 834, 888
TscAI	CASTG	4 cut(s)	931, 1029, 1276, 1340
TseFI	GTSAC	2 cut(s)	932, 1235
TseI	GCWGC	2 cut(s)	230, 1465
Tsp45I	GTSAC	2 cut(s)	932, 1235
TspDTI	ATGAA	3 cut(s)	650, 774, 1115
TspRI	CASTG	4 cut(s)	931, 1029, 1276, 1340
Tth111I	GACNNNGTC	1 cut(s)	1448
Van91I	CCANNNNNTGG	1 cut(s)	44
VpaK11BI	GGWCC	4 cut(s)	23, 181, 190, 414
XceI	RCATGY	1 cut(s)	475
XhoI	CTCGAG	1 cut(s)	174
XmiI	GTMKAC	2 cut(s)	423, 1330
XspI	CTAG	4 cut(s)	95, 822, 1388, 1510
ZraI	GACGTC	1 cut(s)	241
Zsp2I	ATGCAT	1 cut(s)	1011

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.