Rh7BG195800

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000377
Physical Location & Seq
Reverse (-)
16034502 .. 16043143
8642 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG195800.1

Sequence Viewer

Length: 1857 bp
ATGGAATCCAGTTCCTTATCTTCACTGTGGTCGGAAACCAACAGCGGGAGTTGGGGAGTGTTGTTCACTATCTCCGCAATTTTTGCAGCAATTTTTTACGCATGGAGTTGCCTGAAGAGTAGCAGAATCTCGCCGCCGTTGCCTCCCGGTCCACGCGGCCTCCCGCTGGTTGGTAATCTTCTGTCCGTTGACCCACAGCTCCACACCTACTTTGCGGGCCTATCCAAAACTTACGGCCCAATCTTTAAGCTCCGACTGGGTACCAGGCTCTGCGTCGTAATAGCCTCCCCTTCCATCGCTCGAGAGGTCCTCAAGGACCATGACGCTACGTTTGCCAATCGCGGCGTCAATGTTGCAGCTGGGGACGTCGCACTCTACGGCGGGGCAGATATAGTTTGTGCCCCGTACGGGCCGGAGTGGCGAATGATGAGGAAAGTGTGCGCGCTCAAGATGCTTAGCAACACCGCCTTGGACTCGGTTCAAGAACTGCGCCACAAGCAGGTCCGAAAAGCTGTGGGTTACTTGTATACTCGGGTCGGGTCCCCCGTCGACGTTGGTGAGCAACTTTTCGTGGCCATTCTCAATCTTACCACCAACATGTTATGGGGTGGCACCATGGAGCAGAAGGGGGCCGGGGCTGGGGTTTTGACCGAGTTTAGGGAAGCAATGCGGGACATCGCTGAGCTTTCTGGGAAACCCAATATTTCGGAGCTTTATCCAGGTTTGGCCCGGTTTGATTTGCAAGGCATAGCGAAGCAGATGAAGGCTGTGGAGCTTAGGTTTGATAGGATTTTTGAGAAAGTTATCAATCAAAGGTTGACGATGCAGAAAGAAGGCGCGAAAGAGAGCAATGATTTCTTGACATTTCTATTGCGATCTATAGATGAAGGAGGAGATGGCAAAACTCCTCTGACCATGACACGTCTCAAAGCCATGCTCATGGATTTGGTTGTGGGTGGTACTGACTCATCCGCCACCACAATTGAGTTTGCAATGGCTGAAATTATGAACAAACCAGTAGTGTTAGAGAAAGCCCAGAAAGAATTAGATGCTGTAGTTGGGAAAGACAGTATCGTACAAGAGTCTCATATTTACAAACTACCATACTTGGAAGCAGTGATGAAAGAAACTCTACGCTTGCACCCAGCCCTGCCTCTAATGCTCCCACATTGCCCAAGTGAAACATGCATTGTGGGAGGTTATACCATTCCAAAGGGGTCTAAGGTTTTTGTTAATGTGTGGGATATCCACAGAGACCCTTCTAACTGGGAAGACCCATTAGAGTTTAATCCAGAGAGGTTCTTGAATGGTAAATATGACTTCACTGGAAGCAACTTCAACTACTTTCCATTTGGGAGTGGAAAAAGAATATGTCCAGGGACAGCAACGGCAGAGAGGCTTGTCATGCATTTACTTGCATCACTATTGCATTCTTTTGACTGGAAACTACCACAAGGAGAGACGAAGGTGGATTCTTCCGAAAAGTTTGGGATGGTGATGATGAAGAAGGTACCTATGGTTGCTATCCCAACTCCAAGGTTATTGGATTCAGAGCTTTATCAAGACCCTTCTAGTTGGGAAAACCCATTGGAGTTTGATCCAACTAGATTCTTGGATAGTAAATGGGATTACAGTGGGAGTGACTTCAAGTATTTTCCTTTTGGGTCTGGGAGAAGAATAGCAATGGCTGAGAGGACGGTGATGCATTCTCTTGCTACACTGCTGCATTCTTTTGATTGGAAACTGCCACAGGGAGAGAAGTTGGATCTTTCGGAGAAGTTTGGTATTGTATTGAAGAAGATACCTTTGGTTGCCATCCCAACTCCAAGGTTGTCAGATCCAGCACTCTATGAGTAG

Protein Analysis

618

Amino Acids

68.74

Weight (kDa)

7.16

Isoelectric Point (pI)

34.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 48 - 504 1.9e-100 Cytochrome P450
p450 PF00067 519 - 602 2e-14 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000377)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 369
Acc36I ACCTGC 1 cut(s) 490
Acc65I GGTACC 2 cut(s) 260, 1510
AccB1I GGYRCC 3 cut(s) 260, 611, 1510
AccI GTMKAC 2 cut(s) 527, 549
AccII CGCG 4 cut(s) 156, 342, 443, 839
AclWI GGATC 3 cut(s) 1592, 1773, 1832
AcoI YGGCCR 1 cut(s) 573
AcuI CTGAAG 1 cut(s) 134
AcyI GRCGYC 2 cut(s) 345, 366
AfaI GTAC 5 cut(s) 262, 407, 961, 1077, 1512
AfiI CCNNNNNNNGG 7 cut(s) 45, 166, 170, 408, 499, 639, 657
AflIII ACRYGT 2 cut(s) 597, 920
AgsI TTSAA 5 cut(s) 482, 1306, 1339, 1648, 1795
AjiI CACGTC 1 cut(s) 923
AjnI CCWGG 3 cut(s) 263, 718, 1375
AjuI GAANNNNNNNTTGG 2 cut(s) 1790, 1822
AluBI AGCT 8 cut(s) 199, 250, 359, 512, 685, 712, 775, 1555
AluI AGCT 8 cut(s) 199, 250, 359, 512, 685, 712, 775, 1555
Alw26I GTCTC 4 cut(s) 929, 1089, 1248, 1454
AlwI GGATC 3 cut(s) 1592, 1773, 1832
AlwNI CAGNNNCTG 1 cut(s) 270
Ama87I CYCGRG 2 cut(s) 300, 531
AoxI GGCC 7 cut(s) 157, 217, 235, 410, 573, 630, 726
ApeKI GCWGC 3 cut(s) 86, 356, 1723
ArsI GACNNNNNNTTYG 2 cut(s) 314, 346
Asp718I GGTACC 2 cut(s) 260, 1510
AspLEI GCGC 4 cut(s) 443, 445, 492, 839
AsuC2I CCSGG 3 cut(s) 147, 634, 730
AsuHPI GGTGA 3 cut(s) 569, 1507, 1711
AvaI CYCGRG 2 cut(s) 300, 531
AvaII GGWCC 5 cut(s) 149, 307, 316, 502, 540
BaeGI GKGCMC 1 cut(s) 403
BalI TGGCCA 1 cut(s) 575
BanI GGYRCC 3 cut(s) 260, 611, 1510
BbsI GAAGAC 1 cut(s) 1278
BbvI GCAGC 3 cut(s) 98, 368, 1710
BccI CCATC 4 cut(s) 302, 890, 1486, 1823
BceAI ACGGC 4 cut(s) 121, 250, 394, 1404
BciT130I CCWGG 3 cut(s) 265, 720, 1377
BcnI CCSGG 3 cut(s) 147, 634, 730
BcoDI GTCTC 4 cut(s) 929, 1089, 1248, 1454
BfaI CTAG 2 cut(s) 1572, 1605
BfmI CTRYAG 2 cut(s) 879, 1053
BfuAI ACCTGC 1 cut(s) 490
BglI GCCNNNNNGGC 1 cut(s) 418
BisI GCNGC 6 cut(s) 87, 134, 157, 343, 357, 1724
BlpI GCTNAGC 2 cut(s) 455, 681
BlsI GCNGC 6 cut(s) 88, 135, 158, 344, 358, 1725
Bme1390I CCNGG 6 cut(s) 147, 265, 634, 720, 730, 1377
Bme18I GGWCC 5 cut(s) 149, 307, 316, 502, 540
BmeT110I CYCGRG 2 cut(s) 300, 531
BmgBI CACGTC 1 cut(s) 923
BmiI GGNNCC 6 cut(s) 262, 541, 542, 613, 631, 1512
BmrFI CCNGG 6 cut(s) 147, 265, 634, 720, 730, 1377
BmrI ACTGGG 2 cut(s) 266, 1276
BmsI GCATC 5 cut(s) 441, 813, 1039, 1427, 1692
BmuI ACTGGG 2 cut(s) 266, 1276
BpiI GAAGAC 1 cut(s) 1278
BplI GAGNNNNNCTC 2 cut(s) 294, 326
Bpu10I CCTNAGC 1 cut(s) 776
Bpu1102I GCTNAGC 2 cut(s) 455, 681
BpuEI CTTGAG 2 cut(s) 296, 431
BpuMI CCSGG 3 cut(s) 147, 634, 730
BsaHI GRCGYC 2 cut(s) 345, 366
BsaI GGTCTC 1 cut(s) 1248
BsaJI CCNNGG 6 cut(s) 468, 615, 633, 1376, 1535, 1826
BsaXI ACNNNNNCTCC 4 cut(s) 144, 174, 764, 794
Bsc4I CCNNNNNNNGG 7 cut(s) 45, 166, 170, 408, 499, 639, 657
Bse1I ACTGG 6 cut(s) 9, 261, 1016, 1271, 1330, 1445
Bse3DI GCAATG 5 cut(s) 672, 856, 999, 1168, 1689
BseBI CCWGG 3 cut(s) 265, 720, 1377
BseDI CCNNGG 6 cut(s) 468, 615, 633, 1376, 1535, 1826
BseGI GGATG 3 cut(s) 968, 1497, 1815
BseLI CCNNNNNNNGG 7 cut(s) 45, 166, 170, 408, 499, 639, 657
BseMI GCAATG 5 cut(s) 672, 856, 999, 1168, 1689
BseMII CTCAG 2 cut(s) 672, 1680
BseNI ACTGG 6 cut(s) 9, 261, 1016, 1271, 1330, 1445
BsePI GCGCGC 1 cut(s) 441
BseRI GAGGAG 2 cut(s) 897, 906
BseSI GKGCMC 1 cut(s) 403
BseXI GCAGC 3 cut(s) 98, 368, 1710
BseYI CCCAGC 3 cut(s) 359, 638, 1144
Bsh1236I CGCG 4 cut(s) 156, 342, 443, 839
BshFI GGCC 7 cut(s) 159, 219, 237, 412, 575, 632, 728
BshNI GGYRCC 3 cut(s) 260, 611, 1510
BsiHKCI CYCGRG 2 cut(s) 300, 531
BsiSI CCGG 4 cut(s) 147, 413, 633, 730
BsiWI CGTACG 1 cut(s) 405
BslFI GGGAC 4 cut(s) 377, 526, 686, 1393
BslI CCNNNNNNNGG 7 cut(s) 45, 166, 170, 408, 499, 639, 657
BsmAI GTCTC 4 cut(s) 929, 1089, 1248, 1454
BsmBI CGTCTC 2 cut(s) 929, 1454
BsmFI GGGAC 4 cut(s) 377, 526, 686, 1393
BsmI GAATGC 3 cut(s) 1429, 1705, 1726
BsnI GGCC 7 cut(s) 159, 219, 237, 412, 575, 632, 728
Bso31I GGTCTC 1 cut(s) 1248
BsoBI CYCGRG 2 cut(s) 300, 531
Bsp1286I GDGCHC 1 cut(s) 403
Bsp143I GATC 4 cut(s) 875, 1597, 1765, 1837
Bsp1720I GCTNAGC 2 cut(s) 455, 681
Bsp19I CCATGG 1 cut(s) 615
BspANI GGCC 7 cut(s) 159, 219, 237, 412, 575, 632, 728
BspCNI CTCAG 2 cut(s) 673, 1681
BspFNI CGCG 4 cut(s) 156, 342, 443, 839
BspLI GGNNCC 6 cut(s) 262, 541, 542, 613, 631, 1512
BspMI ACCTGC 1 cut(s) 490
BspPI GGATC 3 cut(s) 1592, 1773, 1832
BspT107I GGYRCC 3 cut(s) 260, 611, 1510
BspTNI GGTCTC 1 cut(s) 1248
BsrDI GCAATG 5 cut(s) 672, 856, 999, 1168, 1689
BsrI ACTGG 6 cut(s) 9, 261, 1016, 1271, 1330, 1445
BssECI CCNNGG 6 cut(s) 468, 615, 633, 1376, 1535, 1826
BssHII GCGCGC 1 cut(s) 441
BssMI GATC 4 cut(s) 875, 1597, 1765, 1837
BssNAI GTATAC 1 cut(s) 528
BssNI GRCGYC 2 cut(s) 345, 366
BssT1I CCWWGG 4 cut(s) 468, 615, 1535, 1826
Bst1107I GTATAC 1 cut(s) 528
Bst2UI CCWGG 3 cut(s) 265, 720, 1377
Bst4CI ACNGT 4 cut(s) 27, 1070, 1634, 1699
Bst6I CTCTTC 1 cut(s) 110
BstACI GRCGYC 2 cut(s) 345, 366
BstAPI GCANNNNNTGC 1 cut(s) 83
BstC8I GCNNGC 3 cut(s) 217, 443, 1139
BstDEI CTNAG 5 cut(s) 455, 681, 776, 1221, 1689
BstDSI CCRYGG 1 cut(s) 615
BstF5I GGATG 3 cut(s) 968, 1497, 1815
BstFNI CGCG 4 cut(s) 156, 342, 443, 839
BstHHI GCGC 4 cut(s) 443, 445, 492, 839
BstKTI GATC 4 cut(s) 878, 1600, 1768, 1840
BstMAI GTCTC 4 cut(s) 929, 1089, 1248, 1454
BstMBI GATC 4 cut(s) 875, 1597, 1765, 1837
BstMWI GCNNNNNNNGC 8 cut(s) 83, 139, 332, 418, 451, 496, 1159, 1405
BstNI CCWGG 3 cut(s) 265, 720, 1377
BstNSI RCATGY 2 cut(s) 601, 1188
BstSCI CCNGG 6 cut(s) 145, 263, 632, 718, 728, 1375
BstSFI CTRYAG 2 cut(s) 879, 1053
BstSLI GKGCMC 1 cut(s) 403
BstUI CGCG 4 cut(s) 156, 342, 443, 839
BstV1I GCAGC 3 cut(s) 98, 368, 1710
BstV2I GAAGAC 1 cut(s) 1278
BstX2I RGATCY 2 cut(s) 1765, 1837
BstXI CCANNNNNNTGG 1 cut(s) 940
BstYI RGATCY 2 cut(s) 1765, 1837
BstZ17I GTATAC 1 cut(s) 528
BsuRI GGCC 7 cut(s) 159, 219, 237, 412, 575, 632, 728
BtgI CCRYGG 1 cut(s) 615
BtgZI GCGATG 2 cut(s) 280, 661
BtrI CACGTC 1 cut(s) 923
BtsCI GGATG 3 cut(s) 968, 1497, 1815
BtsI GCAGTG 2 cut(s) 1122, 1718
BtsIMutI CAGTG 5 cut(s) 23, 1122, 1323, 1639, 1718
BveI ACCTGC 1 cut(s) 490
Cac8I GCNNGC 3 cut(s) 217, 443, 1139
CaiI CAGNNNCTG 1 cut(s) 270
CfoI GCGC 4 cut(s) 443, 445, 492, 839
CseI GACGC 3 cut(s) 262, 332, 334
Csp6I GTAC 5 cut(s) 261, 406, 960, 1076, 1511
CspCI CAANNNNNGTGG 2 cut(s) 964, 999
CviAII CATG 9 cut(s) 102, 320, 598, 616, 916, 934, 940, 1185, 1405
CviQI GTAC 5 cut(s) 261, 406, 960, 1076, 1511
DdeI CTNAG 5 cut(s) 455, 681, 776, 1221, 1689
DpnI GATC 4 cut(s) 877, 1599, 1767, 1839
DpnII GATC 4 cut(s) 875, 1597, 1765, 1837
EaeI YGGCCR 1 cut(s) 573
Eam1104I CTCTTC 1 cut(s) 110
EarI CTCTTC 1 cut(s) 110
EciI GGCGGA 1 cut(s) 961
Eco130I CCWWGG 4 cut(s) 468, 615, 1535, 1826
Eco31I GGTCTC 1 cut(s) 1248
Eco32I GATATC 1 cut(s) 1246
Eco47I GGWCC 5 cut(s) 149, 307, 316, 502, 540
Eco57I CTGAAG 1 cut(s) 134
Eco88I CYCGRG 2 cut(s) 300, 531
EcoO109I RGGNCCY 2 cut(s) 307, 540
EcoRII CCWGG 3 cut(s) 263, 718, 1375
EcoRV GATATC 1 cut(s) 1246
EcoT14I CCWWGG 4 cut(s) 468, 615, 1535, 1826
EcoT22I ATGCAT 3 cut(s) 1190, 1410, 1707
ErhI CCWWGG 4 cut(s) 468, 615, 1535, 1826
Esp3I CGTCTC 2 cut(s) 929, 1454
FaeI CATG 9 cut(s) 105, 323, 601, 619, 919, 937, 943, 1188, 1408
FaqI GGGAC 4 cut(s) 377, 526, 686, 1393
FatI CATG 9 cut(s) 101, 319, 597, 615, 915, 933, 939, 1184, 1404
FauI CCCGC 5 cut(s) 38, 171, 208, 374, 663
FblI GTMKAC 2 cut(s) 527, 549
Fnu4HI GCNGC 6 cut(s) 87, 134, 157, 343, 357, 1724
FokI GGATG 3 cut(s) 955, 1504, 1802
Fsp4HI GCNGC 6 cut(s) 87, 134, 157, 343, 357, 1724
FspBI CTAG 2 cut(s) 1572, 1605
GlaI GCGC 4 cut(s) 442, 444, 491, 838
GluI GCNGC 6 cut(s) 87, 134, 157, 343, 357, 1724
GsaI CCCAGC 3 cut(s) 363, 642, 1148
HaeIII GGCC 7 cut(s) 159, 219, 237, 412, 575, 632, 728
HapII CCGG 4 cut(s) 147, 413, 633, 730
HgaI GACGC 3 cut(s) 262, 332, 334
HhaI GCGC 4 cut(s) 443, 445, 492, 839
Hin1I GRCGYC 2 cut(s) 345, 366
Hin1II CATG 9 cut(s) 105, 323, 601, 619, 919, 937, 943, 1188, 1408
Hin6I GCGC 4 cut(s) 441, 443, 490, 837
HinP1I GCGC 4 cut(s) 441, 443, 490, 837
HincII GTYRAC 3 cut(s) 190, 550, 819
HindII GTYRAC 3 cut(s) 190, 550, 819
HinfI GANTC 8 cut(s) 5, 126, 473, 965, 1082, 1472, 1547, 1608
HpaII CCGG 4 cut(s) 147, 413, 633, 730
HphI GGTGA 3 cut(s) 569, 1507, 1711
Hpy166II GTNNAC 6 cut(s) 66, 152, 190, 528, 550, 819
Hpy188I TCNGA 9 cut(s) 34, 254, 506, 709, 912, 1480, 1552, 1774, 1837
Hpy188III TCNNGA 7 cut(s) 302, 448, 482, 859, 1292, 1303, 1562
Hpy8I GTNNAC 6 cut(s) 66, 152, 190, 528, 550, 819
Hpy99I CGWCG 4 cut(s) 278, 371, 551, 554
HpyAV CCTTC 9 cut(s) 300, 619, 757, 827, 881, 1269, 1459, 1501, 1578
HpyCH4III ACNGT 4 cut(s) 27, 1070, 1634, 1699
HpyCH4IV ACGT 4 cut(s) 329, 366, 552, 922
HpyF10VI GCNNNNNNNGC 8 cut(s) 83, 139, 332, 418, 451, 496, 1159, 1405
HpyF3I CTNAG 5 cut(s) 455, 681, 776, 1221, 1689
HpySE526I ACGT 4 cut(s) 329, 366, 552, 922
Hsp92I GRCGYC 2 cut(s) 345, 366
Hsp92II CATG 9 cut(s) 105, 323, 601, 619, 919, 937, 943, 1188, 1408
HspAI GCGC 4 cut(s) 441, 443, 490, 837
KflI GGGWCCC 1 cut(s) 540
KpnI GGTACC 2 cut(s) 264, 1514
Kzo9I GATC 4 cut(s) 875, 1597, 1765, 1837
LmnI GCTCC 6 cut(s) 204, 255, 619, 709, 772, 1167
Lsp1109I GCAGC 3 cut(s) 98, 368, 1710
LweI GCATC 5 cut(s) 441, 813, 1039, 1427, 1692
MaeI CTAG 2 cut(s) 1572, 1605
MaeII ACGT 4 cut(s) 329, 366, 552, 922
MaeIII GTNAC 2 cut(s) 518, 1640
MalI GATC 4 cut(s) 877, 1599, 1767, 1839
MboI GATC 4 cut(s) 875, 1597, 1765, 1837
MboII GAAGA 9 cut(s) 12, 127, 170, 1283, 1467, 1516, 1686, 1807, 1810
MfeI CAATTG 1 cut(s) 981
MflI RGATCY 2 cut(s) 1765, 1837
MhlI GDGCHC 1 cut(s) 403
MlsI TGGCCA 1 cut(s) 575
MluCI AATT 5 cut(s) 78, 90, 981, 1002, 1043
MluNI TGGCCA 1 cut(s) 575
MlyI GAGTC 3 cut(s) 467, 959, 1091
MmeI TCCRAC 4 cut(s) 12, 277, 1625, 1743
Mox20I TGGCCA 1 cut(s) 575
Mph1103I ATGCAT 3 cut(s) 1190, 1410, 1707
MscI TGGCCA 1 cut(s) 575
MseI TTAA 3 cut(s) 246, 1233, 1287
MslI CAYNNNNRTG 2 cut(s) 596, 938
Msp20I TGGCCA 1 cut(s) 575
MspA1I CMGCKG 3 cut(s) 45, 166, 359
MspI CCGG 4 cut(s) 147, 413, 633, 730
MspR9I CCNGG 6 cut(s) 147, 265, 634, 720, 730, 1377
MunI CAATTG 1 cut(s) 981
Mva1269I GAATGC 3 cut(s) 1429, 1705, 1726
MvaI CCWGG 3 cut(s) 265, 720, 1377
MvnI CGCG 4 cut(s) 156, 342, 443, 839
MwoI GCNNNNNNNGC 8 cut(s) 83, 139, 332, 418, 451, 496, 1159, 1405
NciI CCSGG 3 cut(s) 147, 634, 730
NcoI CCATGG 1 cut(s) 615
NdeII GATC 4 cut(s) 875, 1597, 1765, 1837
NlaIII CATG 9 cut(s) 105, 323, 601, 619, 919, 937, 943, 1188, 1408
NlaIV GGNNCC 6 cut(s) 262, 541, 542, 613, 631, 1512
NmuCI GTSAC 1 cut(s) 1640
NsiI ATGCAT 3 cut(s) 1190, 1410, 1707
NspI RCATGY 2 cut(s) 601, 1188
PaeR7I CTCGAG 1 cut(s) 300
PauI GCGCGC 1 cut(s) 441
PciI ACATGT 1 cut(s) 597
PcsI WCGNNNNNNNCGW 1 cut(s) 543
PctI GAATGC 3 cut(s) 1429, 1705, 1726
PfeI GAWTC 5 cut(s) 5, 126, 1472, 1547, 1608
Pfl23II CGTACG 1 cut(s) 405
PkrI GCNGC 6 cut(s) 88, 135, 158, 344, 358, 1725
PleI GAGTC 3 cut(s) 467, 959, 1090
PpsI GAGTC 3 cut(s) 467, 959, 1090
PpuMI RGGWCCY 2 cut(s) 307, 540
PscI ACATGT 1 cut(s) 597
Psp5II RGGWCCY 2 cut(s) 307, 540
Psp6I CCWGG 3 cut(s) 263, 718, 1375
PspFI CCCAGC 3 cut(s) 359, 638, 1144
PspGI CCWGG 3 cut(s) 263, 718, 1375
PspLI CGTACG 1 cut(s) 405
PspN4I GGNNCC 6 cut(s) 262, 541, 542, 613, 631, 1512
PspPPI RGGWCCY 2 cut(s) 307, 540
PstNI CAGNNNCTG 1 cut(s) 270
PsuI RGATCY 2 cut(s) 1765, 1837
PteI GCGCGC 1 cut(s) 441
PvuII CAGCTG 1 cut(s) 359
RsaI GTAC 5 cut(s) 262, 407, 961, 1077, 1512
RsaNI GTAC 5 cut(s) 261, 406, 960, 1076, 1511
RseI CAYNNNNRTG 2 cut(s) 596, 938
SalI GTCGAC 1 cut(s) 548
SaqAI TTAA 3 cut(s) 246, 1233, 1287
SatI GCNGC 6 cut(s) 87, 134, 157, 343, 357, 1724
Sau3AI GATC 4 cut(s) 875, 1597, 1765, 1837
SchI GAGTC 3 cut(s) 467, 959, 1091
ScrFI CCNGG 6 cut(s) 147, 265, 634, 720, 730, 1377
SduI GDGCHC 1 cut(s) 403
SfaNI GCATC 5 cut(s) 441, 813, 1039, 1427, 1692
SfcI CTRYAG 2 cut(s) 879, 1053
Sfr274I CTCGAG 1 cut(s) 300
SgrDI CGTCGACG 1 cut(s) 548
SinI GGWCC 5 cut(s) 149, 307, 316, 502, 540
SlaI CTCGAG 1 cut(s) 300
SmiMI CAYNNNNRTG 2 cut(s) 596, 938
SmlI CTYRAG 3 cut(s) 300, 311, 446
SmoI CTYRAG 3 cut(s) 300, 311, 446
Sse9I AATT 5 cut(s) 78, 90, 981, 1002, 1043
SspI AATATT 1 cut(s) 703
SspMI CTAG 2 cut(s) 1572, 1605
StyD4I CCNGG 6 cut(s) 145, 263, 632, 718, 728, 1375
StyI CCWWGG 4 cut(s) 468, 615, 1535, 1826
TaaI ACNGT 4 cut(s) 27, 1070, 1634, 1699
TaiI ACGT 4 cut(s) 332, 369, 555, 925
TaqI TCGA 2 cut(s) 301, 549
TaqII GACCGA 1 cut(s) 665
TasI AATT 5 cut(s) 78, 90, 981, 1002, 1043
TauI GCSGC 3 cut(s) 136, 159, 345
TfiI GAWTC 5 cut(s) 5, 126, 1472, 1547, 1608
Tru1I TTAA 3 cut(s) 246, 1233, 1287
Tru9I TTAA 3 cut(s) 246, 1233, 1287
TscAI CASTG 5 cut(s) 30, 1122, 1330, 1639, 1725
TseFI GTSAC 1 cut(s) 1640
TseI GCWGC 3 cut(s) 86, 356, 1723
Tsp45I GTSAC 1 cut(s) 1640
TspDTI ATGAA 5 cut(s) 776, 900, 1022, 1136, 1517
TspGWI ACGGA 1 cut(s) 175
TspRI CASTG 5 cut(s) 30, 1122, 1330, 1639, 1725
VpaK11BI GGWCC 5 cut(s) 149, 307, 316, 502, 540
XceI RCATGY 2 cut(s) 601, 1188
XhoI CTCGAG 1 cut(s) 300
XmiI GTMKAC 2 cut(s) 527, 549
XspI CTAG 2 cut(s) 1572, 1605
ZraI GACGTC 1 cut(s) 367
Zsp2I ATGCAT 3 cut(s) 1190, 1410, 1707
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.