Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0000377

Physical Location & Seq

Genomic Coordinates Forward (+)

50994063 .. 50996542

Gene Structure 2480 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003634

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGGAATTCTGGCCGGAATCCGGTACCGGAAGCAGCGGACCATGGAGCGTGGTGATCACGCTCTCCCTCGCTGTCCTTTGGTACGCGTGGCTCTACTTCAAGAGTTCAGACTCTAACTCGCCGCTGCCGCCGGGTCCACGCCCTCTTCCATTAGTCGGGAACCTTCTCTCTCTGGACCCGGAGCTCCACTCCTACTTCTCGGGCCTGGCCCACACCTACGGCCCAATCTACAAGCTCCGCCTCGGCTCCAAGCTCTGCATCGTCGTCACCTCCCCATCCGTCGCCCGCGAGGTCCTTAAGGACCATGACGTCACCTTCGCCAACCGCGACGTCCCCGACGCCGGCCGGGCCGCCTCGTACGGCGGATCCGACATCGTGTGGACCCCGTACGGCCCGGAGTGGCGGATGCTGAGGAAGGTCTGCGTGCTCAAGATGCTCAGCAACACCACGCTCGACTCGGTCCACGAGCTGCGGCGGAAGCAGGTCCAGCGAACGGTCGGGTTCTTCTACGGAAGGGTCGGGTCGCCGGTGGACGTGGGCGAGCAGATGTTCCTGACGGTGATGAACGTGATCACGAACATGCTGTGGGGAGGGACGGTGCAGGACGAGGGCGCCGGGATCGGGGCGGAGTTCCGGCAAGTGGTGGGGGAGATGACGGAGCTGCTGGCTAAGCCGAACGTTTCGGACTTTTATCCGGTTTTGGCCCGGTTTGACTTGCAAGGCGTGTTCAAGCAGATGGAGGGCTTAGGGAAGAGGTTCGACGCGATATTCGAGAGAGTGATAGATCAACGGCTGAGGATGGAGAAGCAAGGCGCCAAAGAGGAGAGTAAAGATTTTTTGACTTTTTTACTGCGGTTAAAAGAGGAGGGAGATTCCAAGACGCCGTTTACTATGACTCACCTCAAAGCCTTGCTTATGGATATGGTTGTGGGCGGGACGGACACATCCTCCAACACAATTGAATTTGCAATGTCGGAAGTCATGAACAAACCAGAAGTGTTACAAAAAGTCCAGCAAGAATTAGAAGCTGTAGTTGGCAAAAACAGCATTGTAGAAGAGTCTCACATTCACAAGCTACCGTACTTATATGCAGTGATGAAAGAAACACTGCGCTTGCACCCAGTCCTGCCTCTATTAGTCCCACATTGCCCAAGTGAGACATGCACTGTGGGAGGCTACACCATTCCAAAGGGGTCAAGGATTTTTGTTAATGTATGGGCTATACATAGAGACCCTTCTAGTTGGGAAAACCCATCGGAGTTTGATCCAACTAGATTCTTGGATAGTAAATGGGATTACAGTGGGAGTGACTTCAAGTATTTTCCTTTTGGGTCTGGGAGAAGAATATGTGCAGGGATAGCAATGGCTGAGAGGATGGTGATGCATTCTCTTGCTACACTGCTGCATTCTTTCGATTGGAAACTGCCACAGGGAGAGAAGTTGGATCTTTCGGAGAAGTTTGGTATTGTATTGAAGAAGAAGATACCTTTGGTTGCGATCCCAACTCCAAGGTTATCAGATCCAGCACTCTATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0016020 GO:0019748 GO:0042221 GO:0044550 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934

Pfam Domains

Protein Families

p450

Protein Analysis

513

Amino Acids

57.46

Weight (kDa)

6.49

Isoelectric Point (pI)

38.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	43 - 494	9.7e-108	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca	FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica	MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica	Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis	pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis	RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata	RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora	Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii	Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa	Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha	Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana	Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	308
AatII	GACGTC	2 cut(s)	312, 333
Acc36I	ACCTGC	1 cut(s)	472
Acc65I	GGTACC	1 cut(s)	23
AccB1I	GGYRCC	3 cut(s)	23, 611, 812
AccII	CGCG	4 cut(s)	86, 288, 327, 764
AclI	AACGTT	1 cut(s)	678
AclWI	GGATC	7 cut(s)	360, 373, 626, 1259, 1452, 1492, 1514
AcoI	YGGCCR	2 cut(s)	11, 343
AcsI	RAATTY	2 cut(s)	5, 962
AcyI	GRCGYC	6 cut(s)	309, 330, 339, 612, 813, 881
AfaI	GTAC	5 cut(s)	25, 83, 359, 389, 1082
AfiI	CCNNNNNNNGG	6 cut(s)	20, 155, 341, 493, 621, 640
AflII	CTTAAG	1 cut(s)	296
AflIII	ACRYGT	1 cut(s)	84
AgsI	TTSAA	5 cut(s)	100, 730, 962, 1315, 1474
AjiI	CACGTC	1 cut(s)	535
AjnI	CCWGG	1 cut(s)	204
AjuI	GAANNNNNNNTTGG	4 cut(s)	1017, 1049, 1472, 1504
AluBI	AGCT	7 cut(s)	184, 235, 253, 469, 661, 1028, 1075
AluI	AGCT	7 cut(s)	184, 235, 253, 469, 661, 1028, 1075
Alw21I	GWGCWC	2 cut(s)	186, 429
Alw26I	GTCTC	3 cut(s)	1065, 1151, 1224
AlwI	GGATC	7 cut(s)	360, 373, 626, 1259, 1452, 1492, 1514
Ama87I	CYCGRG	1 cut(s)	199
AoxI	GGCC	8 cut(s)	11, 202, 207, 220, 343, 348, 391, 702
ApeKI	GCWGC	5 cut(s)	33, 124, 469, 661, 1402
ApoI	RAATTY	2 cut(s)	5, 962
ArsI	GACNNNNNNTTYG	4 cut(s)	299, 331, 752, 784
Asp700I	GAANNNNTTC	1 cut(s)	755
Asp718I	GGTACC	1 cut(s)	23
AspLEI	GCGC	3 cut(s)	614, 815, 1113
AsuC2I	CCSGG	6 cut(s)	132, 179, 347, 395, 616, 706
AsuHPI	GGTGA	6 cut(s)	64, 259, 304, 571, 890, 1390
AvaI	CYCGRG	1 cut(s)	199
AvaII	GGWCC	8 cut(s)	38, 134, 175, 292, 301, 381, 460, 484
BamHI	GGATCC	1 cut(s)	365
BanI	GGYRCC	3 cut(s)	23, 611, 812
BanII	GRGCYC	1 cut(s)	186
BauI	CACGAG	1 cut(s)	464
Bbv12I	GWGCWC	2 cut(s)	186, 429
BbvCI	CCTCAGC	2 cut(s)	410, 794
BbvI	GCAGC	5 cut(s)	45, 111, 456, 648, 1389
BccI	CCATC	5 cut(s)	283, 730, 793, 1261, 1369
BceAI	ACGGC	5 cut(s)	235, 376, 406, 806, 868
BciT130I	CCWGG	1 cut(s)	206
BclI	TGATCA	2 cut(s)	54, 570
BcnI	CCSGG	6 cut(s)	132, 179, 347, 395, 616, 706
BcoDI	GTCTC	3 cut(s)	1065, 1151, 1224
BfaI	CTAG	2 cut(s)	1239, 1272
BfmI	CTRYAG	1 cut(s)	1029
BfoI	RGCGCY	2 cut(s)	615, 816
BfrI	CTTAAG	1 cut(s)	296
BfuAI	ACCTGC	1 cut(s)	472
BglI	GCCNNNNNGGC	1 cut(s)	347
BisI	GCNGC	9 cut(s)	34, 122, 125, 128, 351, 470, 473, 662, 1403
BlpI	GCTNAGC	2 cut(s)	437, 669
BlsI	GCNGC	9 cut(s)	35, 123, 126, 129, 352, 471, 474, 663, 1404
Bme1390I	CCNGG	7 cut(s)	132, 179, 206, 347, 395, 616, 706
Bme18I	GGWCC	8 cut(s)	38, 134, 175, 292, 301, 381, 460, 484
BmeT110I	CYCGRG	1 cut(s)	199
BmgBI	CACGTC	1 cut(s)	535
BmiI	GGNNCC	9 cut(s)	25, 135, 161, 177, 247, 367, 383, 613, 814
BmrFI	CCNGG	7 cut(s)	132, 179, 206, 347, 395, 616, 706
BmrI	ACTGGG	1 cut(s)	1115
BmsI	GCATC	4 cut(s)	267, 396, 423, 1371
BmuI	ACTGGG	1 cut(s)	1115
BplI	GAGNNNNNCTC	2 cut(s)	173, 205
Bpu10I	CCTNAGC	3 cut(s)	410, 745, 794
Bpu1102I	GCTNAGC	2 cut(s)	437, 669
BpuEI	CTTGAG	1 cut(s)	413
BpuMI	CCSGG	6 cut(s)	132, 179, 347, 395, 616, 706
BsaHI	GRCGYC	6 cut(s)	309, 330, 339, 612, 813, 881
BsaI	GGTCTC	1 cut(s)	1224
BsaJI	CCNNGG	3 cut(s)	41, 241, 1508
BsaWI	WCCGGW	3 cut(s)	20, 26, 694
BsaXI	ACNNNNNCTCC	4 cut(s)	582, 612, 932, 962
Bsc4I	CCNNNNNNNGG	6 cut(s)	20, 155, 341, 493, 621, 640
Bse118I	RCCGGY	2 cut(s)	341, 526
Bse1I	ACTGG	1 cut(s)	1121
Bse3DI	GCAATG	3 cut(s)	975, 1144, 1368
BseBI	CCWGG	1 cut(s)	206
BseDI	CCNNGG	3 cut(s)	41, 241, 1508
BseGI	GGATG	5 cut(s)	275, 411, 804, 944, 1380
BseLI	CCNNNNNNNGG	6 cut(s)	20, 155, 341, 493, 621, 640
BseMI	GCAATG	3 cut(s)	975, 1144, 1368
BseMII	CTCAG	4 cut(s)	401, 451, 785, 1359
BseNI	ACTGG	1 cut(s)	1121
BseRI	GAGGAG	2 cut(s)	836, 878
BseX3I	CGGCCG	1 cut(s)	343
BseXI	GCAGC	5 cut(s)	45, 111, 456, 648, 1389
BsgI	GTGCAG	2 cut(s)	620, 1371
Bsh1236I	CGCG	4 cut(s)	86, 288, 327, 764
Bsh1285I	CGRYCG	2 cut(s)	346, 498
BshFI	GGCC	8 cut(s)	13, 204, 209, 222, 345, 350, 393, 704
BshNI	GGYRCC	3 cut(s)	23, 611, 812
BsiEI	CGRYCG	2 cut(s)	346, 498
BsiHKAI	GWGCWC	2 cut(s)	186, 429
BsiHKCI	CYCGRG	1 cut(s)	199
BsiWI	CGTACG	2 cut(s)	357, 387
BslFI	GGGAC	4 cut(s)	317, 607, 949, 1124
BslI	CCNNNNNNNGG	6 cut(s)	20, 155, 341, 493, 621, 640
BsmAI	GTCTC	3 cut(s)	1065, 1151, 1224
BsmFI	GGGAC	4 cut(s)	317, 607, 949, 1124
BsmI	GAATGC	2 cut(s)	1384, 1405
BsnI	GGCC	8 cut(s)	13, 204, 209, 222, 345, 350, 393, 704
Bso31I	GGTCTC	1 cut(s)	1224
BsoBI	CYCGRG	1 cut(s)	199
Bsp1286I	GDGCHC	2 cut(s)	186, 429
Bsp143I	GATC	9 cut(s)	54, 365, 570, 618, 784, 1264, 1444, 1497, 1519
Bsp1720I	GCTNAGC	2 cut(s)	437, 669
Bsp19I	CCATGG	1 cut(s)	41
BspANI	GGCC	8 cut(s)	13, 204, 209, 222, 345, 350, 393, 704
BspCNI	CTCAG	4 cut(s)	402, 450, 786, 1360
BspFNI	CGCG	4 cut(s)	86, 288, 327, 764
BspHI	TCATGA	1 cut(s)	981
BspLI	GGNNCC	9 cut(s)	25, 135, 161, 177, 247, 367, 383, 613, 814
BspMI	ACCTGC	1 cut(s)	472
BspPI	GGATC	7 cut(s)	360, 373, 626, 1259, 1452, 1492, 1514
BspT107I	GGYRCC	3 cut(s)	23, 611, 812
BspTI	CTTAAG	1 cut(s)	296
BspTNI	GGTCTC	1 cut(s)	1224
BsrDI	GCAATG	3 cut(s)	975, 1144, 1368
BsrFI	RCCGGY	2 cut(s)	341, 526
BsrI	ACTGG	1 cut(s)	1121
BssAI	RCCGGY	2 cut(s)	341, 526
BssECI	CCNNGG	3 cut(s)	41, 241, 1508
BssMI	GATC	9 cut(s)	54, 365, 570, 618, 784, 1264, 1444, 1497, 1519
BssNI	GRCGYC	6 cut(s)	309, 330, 339, 612, 813, 881
BssSI	CACGAG	1 cut(s)	464
BssT1I	CCWWGG	2 cut(s)	41, 1508
Bst2BI	CACGAG	1 cut(s)	464
Bst2UI	CCWGG	1 cut(s)	206
Bst4CI	ACNGT	6 cut(s)	496, 559, 598, 1080, 1168, 1301
Bst6I	CTCTTC	3 cut(s)	150, 746, 1050
BstACI	GRCGYC	6 cut(s)	309, 330, 339, 612, 813, 881
BstAFI	CTTAAG	1 cut(s)	296
BstC8I	GCNNGC	6 cut(s)	286, 343, 425, 542, 666, 1115
BstDEI	CTNAG	6 cut(s)	410, 437, 669, 745, 794, 1368
BstDSI	CCRYGG	1 cut(s)	41
BstF5I	GGATG	5 cut(s)	275, 411, 804, 944, 1380
BstFNI	CGCG	4 cut(s)	86, 288, 327, 764
BstH2I	RGCGCY	2 cut(s)	615, 816
BstHHI	GCGC	3 cut(s)	614, 815, 1113
BstKTI	GATC	9 cut(s)	57, 368, 573, 621, 787, 1267, 1447, 1500, 1522
BstMAI	GTCTC	3 cut(s)	1065, 1151, 1224
BstMBI	GATC	9 cut(s)	54, 365, 570, 618, 784, 1264, 1444, 1497, 1519
BstMCI	CGRYCG	2 cut(s)	346, 498
BstMWI	GCNNNNNNNGC	8 cut(s)	127, 347, 433, 478, 487, 670, 1044, 1358
BstNI	CCWGG	1 cut(s)	206
BstNSI	RCATGY	2 cut(s)	583, 1164
BstSCI	CCNGG	7 cut(s)	130, 177, 204, 345, 393, 614, 704
BstSFI	CTRYAG	1 cut(s)	1029
BstUI	CGCG	4 cut(s)	86, 288, 327, 764
BstV1I	GCAGC	5 cut(s)	45, 111, 456, 648, 1389
BstX2I	RGATCY	3 cut(s)	365, 1444, 1519
BstYI	RGATCY	3 cut(s)	365, 1444, 1519
BstZI	CGGCCG	1 cut(s)	343
BsuRI	GGCC	8 cut(s)	13, 204, 209, 222, 345, 350, 393, 704
BtgI	CCRYGG	1 cut(s)	41
BtrI	CACGTC	1 cut(s)	535
BtsCI	GGATG	5 cut(s)	275, 411, 804, 944, 1380
BtsI	GCAGTG	3 cut(s)	1098, 1106, 1397
BtsIMutI	CAGTG	5 cut(s)	1098, 1106, 1164, 1306, 1397
BveI	ACCTGC	1 cut(s)	472
Cac8I	GCNNGC	6 cut(s)	286, 343, 425, 542, 666, 1115
CciI	TCATGA	1 cut(s)	981
CfoI	GCGC	3 cut(s)	614, 815, 1113
Cfr10I	RCCGGY	2 cut(s)	341, 526
CseI	GACGC	3 cut(s)	347, 770, 889
Csp6I	GTAC	5 cut(s)	24, 82, 358, 388, 1081
CviAII	CATG	5 cut(s)	42, 305, 580, 982, 1161
CviQI	GTAC	5 cut(s)	24, 82, 358, 388, 1081
DdeI	CTNAG	6 cut(s)	410, 437, 669, 745, 794, 1368
DinI	GGCGCC	2 cut(s)	613, 814
DpnI	GATC	9 cut(s)	56, 367, 572, 620, 786, 1266, 1446, 1499, 1521
DpnII	GATC	9 cut(s)	54, 365, 570, 618, 784, 1264, 1444, 1497, 1519
DrdI	GACNNNNNNGTC	1 cut(s)	308
DseDI	GACNNNNNNGTC	1 cut(s)	308
EaeI	YGGCCR	2 cut(s)	11, 343
EagI	CGGCCG	1 cut(s)	343
Eam1104I	CTCTTC	3 cut(s)	150, 746, 1050
EarI	CTCTTC	3 cut(s)	150, 746, 1050
EciI	GGCGGA	5 cut(s)	227, 378, 418, 490, 641
Ecl136II	GAGCTC	1 cut(s)	184
EclXI	CGGCCG	1 cut(s)	343
Eco130I	CCWWGG	2 cut(s)	41, 1508
Eco24I	GRGCYC	1 cut(s)	186
Eco31I	GGTCTC	1 cut(s)	1224
Eco47I	GGWCC	8 cut(s)	38, 134, 175, 292, 301, 381, 460, 484
Eco52I	CGGCCG	1 cut(s)	343
Eco53kI	GAGCTC	1 cut(s)	184
Eco88I	CYCGRG	1 cut(s)	199
EcoICRI	GAGCTC	1 cut(s)	184
EcoO109I	RGGNCCY	1 cut(s)	292
EcoRI	GAATTC	1 cut(s)	5
EcoRII	CCWGG	1 cut(s)	204
EcoT14I	CCWWGG	2 cut(s)	41, 1508
EcoT22I	ATGCAT	1 cut(s)	1386
EcoT38I	GRGCYC	1 cut(s)	186
EgeI	GGCGCC	2 cut(s)	613, 814
EheI	GGCGCC	2 cut(s)	613, 814
ErhI	CCWWGG	2 cut(s)	41, 1508
FaeI	CATG	5 cut(s)	45, 308, 583, 985, 1164
FalI	AAGNNNNNCTT	2 cut(s)	897, 929
FaqI	GGGAC	4 cut(s)	317, 607, 949, 1124
FatI	CATG	5 cut(s)	41, 304, 579, 981, 1160
FauI	CCCGC	2 cut(s)	293, 926
FbaI	TGATCA	2 cut(s)	54, 570
Fnu4HI	GCNGC	9 cut(s)	34, 122, 125, 128, 351, 470, 473, 662, 1403
FokI	GGATG	5 cut(s)	262, 418, 811, 931, 1387
FriOI	GRGCYC	1 cut(s)	186
Fsp4HI	GCNGC	9 cut(s)	34, 122, 125, 128, 351, 470, 473, 662, 1403
FspBI	CTAG	2 cut(s)	1239, 1272
GlaI	GCGC	3 cut(s)	613, 814, 1112
GluI	GCNGC	9 cut(s)	34, 122, 125, 128, 351, 470, 473, 662, 1403
HaeII	RGCGCY	2 cut(s)	615, 816
HaeIII	GGCC	8 cut(s)	13, 204, 209, 222, 345, 350, 393, 704
HgaI	GACGC	3 cut(s)	347, 770, 889
HhaI	GCGC	3 cut(s)	614, 815, 1113
Hin1I	GRCGYC	6 cut(s)	309, 330, 339, 612, 813, 881
Hin1II	CATG	5 cut(s)	45, 308, 583, 985, 1164
Hin6I	GCGC	3 cut(s)	612, 813, 1111
HinP1I	GCGC	3 cut(s)	612, 813, 1111
HinfI	GANTC	7 cut(s)	17, 110, 455, 872, 895, 1058, 1275
HphI	GGTGA	6 cut(s)	64, 259, 304, 571, 890, 1390
Hpy166II	GTNNAC	5 cut(s)	137, 381, 463, 532, 888
Hpy188I	TCNGA	7 cut(s)	109, 370, 685, 976, 1258, 1453, 1519
Hpy188III	TCNNGA	8 cut(s)	100, 157, 173, 430, 553, 574, 772, 982
Hpy8I	GTNNAC	5 cut(s)	137, 381, 463, 532, 888
Hpy99I	CGWCG	5 cut(s)	266, 284, 332, 341, 764
HpyAV	CCTTC	5 cut(s)	173, 325, 409, 507, 1245
HpyCH4III	ACNGT	6 cut(s)	496, 559, 598, 1080, 1168, 1301
HpyCH4IV	ACGT	5 cut(s)	309, 330, 534, 567, 678
HpyF10VI	GCNNNNNNNGC	8 cut(s)	127, 347, 433, 478, 487, 670, 1044, 1358
HpyF3I	CTNAG	6 cut(s)	410, 437, 669, 745, 794, 1368
HpySE526I	ACGT	5 cut(s)	309, 330, 534, 567, 678
Hsp92I	GRCGYC	6 cut(s)	309, 330, 339, 612, 813, 881
Hsp92II	CATG	5 cut(s)	45, 308, 583, 985, 1164
HspAI	GCGC	3 cut(s)	612, 813, 1111
KasI	GGCGCC	2 cut(s)	611, 812
KpnI	GGTACC	1 cut(s)	27
KroI	GCCGGC	1 cut(s)	341
KroNI	GCCGGC	1 cut(s)	343
Ksp22I	TGATCA	2 cut(s)	54, 570
Kzo9I	GATC	9 cut(s)	54, 365, 570, 618, 784, 1264, 1444, 1497, 1519
LmnI	GCTCC	6 cut(s)	45, 181, 189, 240, 251, 658
Lsp1109I	GCAGC	5 cut(s)	45, 111, 456, 648, 1389
LweI	GCATC	4 cut(s)	267, 396, 423, 1371
MaeI	CTAG	2 cut(s)	1239, 1272
MaeII	ACGT	5 cut(s)	309, 330, 534, 567, 678
MaeIII	GTNAC	4 cut(s)	265, 310, 999, 1307
MalI	GATC	9 cut(s)	56, 367, 572, 620, 786, 1266, 1446, 1499, 1521
MboI	GATC	9 cut(s)	54, 365, 570, 618, 784, 1264, 1444, 1497, 1519
MboII	GAAGA	8 cut(s)	137, 496, 763, 1067, 1353, 1486, 1489, 1492
MfeI	CAATTG	1 cut(s)	957
MflI	RGATCY	3 cut(s)	365, 1444, 1519
MhlI	GDGCHC	2 cut(s)	186, 429
MluCI	AATT	4 cut(s)	5, 957, 962, 1019
MluI	ACGCGT	1 cut(s)	84
Mly113I	GGCGCC	2 cut(s)	612, 813
MlyI	GAGTC	4 cut(s)	104, 449, 889, 1067
MmeI	TCCRAC	5 cut(s)	393, 954, 975, 1292, 1422
Mph1103I	ATGCAT	1 cut(s)	1386
MroNI	GCCGGC	1 cut(s)	341
MroXI	GAANNNNTTC	1 cut(s)	755
MseI	TTAA	3 cut(s)	297, 857, 1209
MslI	CAYNNNNRTG	1 cut(s)	578
MspA1I	CMGCKG	2 cut(s)	36, 124
MspCI	CTTAAG	1 cut(s)	296
MspR9I	CCNGG	7 cut(s)	132, 179, 206, 347, 395, 616, 706
MunI	CAATTG	1 cut(s)	957
Mva1269I	GAATGC	2 cut(s)	1384, 1405
MvaI	CCWGG	1 cut(s)	206
MvnI	CGCG	4 cut(s)	86, 288, 327, 764
MwoI	GCNNNNNNNGC	8 cut(s)	127, 347, 433, 478, 487, 670, 1044, 1358
NaeI	GCCGGC	1 cut(s)	343
NarI	GGCGCC	2 cut(s)	612, 813
NciI	CCSGG	6 cut(s)	132, 179, 347, 395, 616, 706
NcoI	CCATGG	1 cut(s)	41
NdeII	GATC	9 cut(s)	54, 365, 570, 618, 784, 1264, 1444, 1497, 1519
NgoMIV	GCCGGC	1 cut(s)	341
NlaIII	CATG	5 cut(s)	45, 308, 583, 985, 1164
NlaIV	GGNNCC	9 cut(s)	25, 135, 161, 177, 247, 367, 383, 613, 814
NmeAIII	GCCGAG	1 cut(s)	222
NmuCI	GTSAC	3 cut(s)	265, 310, 1307
NsiI	ATGCAT	1 cut(s)	1386
NspI	RCATGY	2 cut(s)	583, 1164
PagI	TCATGA	1 cut(s)	981
PcsI	WCGNNNNNNNCGW	3 cut(s)	324, 366, 768
PctI	GAATGC	2 cut(s)	1384, 1405
PdiI	GCCGGC	1 cut(s)	343
PdmI	GAANNNNTTC	1 cut(s)	755
PfeI	GAWTC	3 cut(s)	17, 872, 1275
Pfl23II	CGTACG	2 cut(s)	357, 387
PflFI	GACNNNGTC	1 cut(s)	458
PkrI	GCNGC	9 cut(s)	35, 123, 126, 129, 352, 471, 474, 663, 1404
PleI	GAGTC	4 cut(s)	104, 449, 889, 1066
PluTI	GGCGCC	2 cut(s)	615, 816
PpsI	GAGTC	4 cut(s)	104, 449, 889, 1066
PpuMI	RGGWCCY	1 cut(s)	292
Psp124BI	GAGCTC	1 cut(s)	186
Psp1406I	AACGTT	1 cut(s)	678
Psp5II	RGGWCCY	1 cut(s)	292
Psp6I	CCWGG	1 cut(s)	204
PspGI	CCWGG	1 cut(s)	204
PspLI	CGTACG	2 cut(s)	357, 387
PspN4I	GGNNCC	9 cut(s)	25, 135, 161, 177, 247, 367, 383, 613, 814
PspPPI	RGGWCCY	1 cut(s)	292
PsuI	RGATCY	3 cut(s)	365, 1444, 1519
PsyI	GACNNNGTC	1 cut(s)	458
RsaI	GTAC	5 cut(s)	25, 83, 359, 389, 1082
RsaNI	GTAC	5 cut(s)	24, 82, 358, 388, 1081
RseI	CAYNNNNRTG	1 cut(s)	578
SacI	GAGCTC	1 cut(s)	186
SaqAI	TTAA	3 cut(s)	297, 857, 1209
SatI	GCNGC	9 cut(s)	34, 122, 125, 128, 351, 470, 473, 662, 1403
Sau3AI	GATC	9 cut(s)	54, 365, 570, 618, 784, 1264, 1444, 1497, 1519
SchI	GAGTC	4 cut(s)	104, 449, 889, 1067
ScrFI	CCNGG	7 cut(s)	132, 179, 206, 347, 395, 616, 706
SduI	GDGCHC	2 cut(s)	186, 429
SfaNI	GCATC	4 cut(s)	267, 396, 423, 1371
SfcI	CTRYAG	1 cut(s)	1029
SfoI	GGCGCC	2 cut(s)	613, 814
SgrAI	CRCCGGYG	1 cut(s)	526
SinI	GGWCC	8 cut(s)	38, 134, 175, 292, 301, 381, 460, 484
SmiMI	CAYNNNNRTG	1 cut(s)	578
SmlI	CTYRAG	2 cut(s)	296, 428
SmoI	CTYRAG	2 cut(s)	296, 428
Sse9I	AATT	4 cut(s)	5, 957, 962, 1019
SspDI	GGCGCC	2 cut(s)	611, 812
SspMI	CTAG	2 cut(s)	1239, 1272
SstI	GAGCTC	1 cut(s)	186
StyD4I	CCNGG	7 cut(s)	130, 177, 204, 345, 393, 614, 704
StyI	CCWWGG	2 cut(s)	41, 1508
TaaI	ACNGT	6 cut(s)	496, 559, 598, 1080, 1168, 1301
TaiI	ACGT	5 cut(s)	312, 333, 537, 570, 681
TaqI	TCGA	4 cut(s)	453, 759, 771, 1413
TaqII	GACCGA	1 cut(s)	448
TasI	AATT	4 cut(s)	5, 957, 962, 1019
TauI	GCSGC	4 cut(s)	124, 130, 353, 475
TfiI	GAWTC	3 cut(s)	17, 872, 1275
Tru1I	TTAA	3 cut(s)	297, 857, 1209
Tru9I	TTAA	3 cut(s)	297, 857, 1209
TscAI	CASTG	5 cut(s)	1098, 1113, 1171, 1306, 1404
TseFI	GTSAC	3 cut(s)	265, 310, 1307
TseI	GCWGC	5 cut(s)	33, 124, 469, 661, 1402
Tsp45I	GTSAC	3 cut(s)	265, 310, 1307
TspDTI	ATGAA	3 cut(s)	578, 998, 1112
TspGWI	ACGGA	4 cut(s)	268, 525, 671, 953
TspRI	CASTG	5 cut(s)	1098, 1113, 1171, 1306, 1404
Tth111I	GACNNNGTC	1 cut(s)	458
Vha464I	CTTAAG	1 cut(s)	296
VpaK11BI	GGWCC	8 cut(s)	38, 134, 175, 292, 301, 381, 460, 484
XapI	RAATTY	2 cut(s)	5, 962
XceI	RCATGY	2 cut(s)	583, 1164
XmnI	GAANNNNTTC	1 cut(s)	755
XspI	CTAG	2 cut(s)	1239, 1272
ZraI	GACGTC	2 cut(s)	310, 331
Zsp2I	ATGCAT	1 cut(s)	1386

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.