Rh7CG205300

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000377
Physical Location & Seq
Forward (+)
18311692 .. 18315830
4139 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG205300.1

Sequence Viewer

Length: 1092 bp
ATGGAATCAAAATCCTCTCACGCTTCCTTGTTCTCATTAGAAACCAGTACCGGAAACATATTGCCAAAAATAAAAGAAACCAATACCGGAAACAACGAAACTTGGCGAGTGTTCTTCACTCTCTGCCCTATTTTCGCTTTCCTCTGGTTCGCATGGCTGTACATCCAGAAATCGCGGATCGGCAGCGGAAGCTCGCCCCCTCTGCCGCCGGGTCCAAGTGGCCTCCCACTCGTCGGAAACCTTCTCTCCCTCGACCCAGATCTCCACTCCTACTTCGCCAGCCTGGCCCACAAATACGGCCCAATCTACAAGCTCCGGCTTGGCACCAAGCTCTGCATCGTAGTCACCTCCCCTTCCGCCGCTCGCGTGGTGCTCAAAGACCTTGACGTCACCTTCGCCAACCGCGACGTTGGGGCCGCATTGTACGGCGGGTCCGACATAGTCTGCTCCTCGTACGGGCCGGAGCTGCGGATGTTGAGAAAAGTGTGCGTGCAAAATTTGTTTACCAAGACCAAGTTGGATTCGGTCCGCGACCTCCGTGGGAAGCAGGTCCGAAAATCCGTGGGTCAAATACACAGTCGGATCGGGTCGCCCGTCAACGTGGGTGAGCAAATGTTTTCGACCATGCTTGACGTGAGCACTAATGTGCTATGGGGCGGCACGGTGGAGGAGGGGGCCGGATTTGGGACTGCGTTTCGGAAAGTGATGTCGGAGTTGTGGGAGCTTTTAGCAAGGTTAAATATTTCGGACCTTTATCCGGGTTTGGCCCGGTTCGATTTGCAAGGTGTGGCAAAGAAGATGAAGGGTTTGGAGGTGAAGTTTGATGGGATCTTTGAGGCAGTGATTGATCAACGGCTGAGGATGGAGAAACAGGGAGCGAAAGAGGAGAGTAACGATTTTTTGACTTTTCTGTTGCGGGTGAAGGATGATGGAGATGCCGAGACACCTTTTACCATGACCAACCTCAAAGCCTTACTCATGGATATCAACGAAAACAAAGTAACAGACAGATTGGTCAATACCAATCTGAAGCTCCCACAAGGCCTAAGCTGCGTCACATGTGGAGGATGTTCTGGAATTAGTGCTAGATAA

Protein Analysis

363

Amino Acids

39.9

Weight (kDa)

8.97

Isoelectric Point (pI)

31.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 69 - 329 3.9e-31 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000377)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 386, 1013
AatII GACGTC 1 cut(s) 390
Acc36I ACCTGC 1 cut(s) 538
AccB1I GGYRCC 1 cut(s) 323
AccBSI CCGCTC 1 cut(s) 362
AccII CGCG 4 cut(s) 175, 366, 405, 531
AclWI GGATC 3 cut(s) 185, 590, 836
AcsI RAATTY 1 cut(s) 496
AcuI CTGAAG 1 cut(s) 1049
AcyI GRCGYC 1 cut(s) 387
AfaI GTAC 4 cut(s) 49, 161, 425, 455
AfiI CCNNNNNNNGG 4 cut(s) 233, 456, 684, 757
AflIII ACRYGT 1 cut(s) 1058
AjiI CACGTC 1 cut(s) 634
AjnI CCWGG 1 cut(s) 282
AleI CACNNNNGTG 1 cut(s) 644
AluBI AGCT 7 cut(s) 192, 313, 331, 466, 724, 1033, 1050
AluI AGCT 7 cut(s) 192, 313, 331, 466, 724, 1033, 1050
Alw21I GWGCWC 2 cut(s) 375, 641
Alw26I GTCTC 1 cut(s) 935
AlwI GGATC 3 cut(s) 185, 590, 836
AoxI GGCC 8 cut(s) 220, 285, 298, 414, 458, 675, 765, 1042
ApeKI GCWGC 3 cut(s) 183, 466, 1050
ApoI RAATTY 1 cut(s) 496
ArsI GACNNNNNNTTYG 4 cut(s) 377, 409, 562, 594
AsuC2I CCSGG 3 cut(s) 210, 759, 769
AsuHPI GGTGA 5 cut(s) 337, 382, 617, 826, 931
AvaII GGWCC 5 cut(s) 212, 432, 526, 550, 748
BanI GGYRCC 1 cut(s) 323
Bbv12I GWGCWC 2 cut(s) 375, 641
BbvCI CCTCAGC 1 cut(s) 857
BbvI GCAGC 3 cut(s) 195, 453, 1037
BccI CCATC 3 cut(s) 818, 856, 923
BceAI ACGGC 3 cut(s) 313, 442, 869
BciT130I CCWGG 1 cut(s) 284
BclI TGATCA 1 cut(s) 847
BcnI CCSGG 3 cut(s) 210, 759, 769
BcoDI GTCTC 1 cut(s) 935
BfaI CTAG 1 cut(s) 1086
BfuAI ACCTGC 1 cut(s) 538
BglI GCCNNNNNGGC 1 cut(s) 284
BglII AGATCT 1 cut(s) 259
BisI GCNGC 7 cut(s) 184, 206, 360, 417, 467, 658, 1051
BlsI GCNGC 7 cut(s) 185, 207, 361, 418, 468, 659, 1052
Bme1390I CCNGG 4 cut(s) 210, 284, 759, 769
Bme18I GGWCC 5 cut(s) 212, 432, 526, 550, 748
BmgBI CACGTC 1 cut(s) 634
BmiI GGNNCC 5 cut(s) 213, 325, 415, 433, 676
BmrFI CCNGG 4 cut(s) 210, 284, 759, 769
BmsI GCATC 2 cut(s) 345, 925
Bpu10I CCTNAGC 2 cut(s) 857, 1046
BpuMI CCSGG 3 cut(s) 210, 759, 769
BsaHI GRCGYC 1 cut(s) 387
BsaJI CCNNGG 2 cut(s) 538, 561
BsaWI WCCGGW 2 cut(s) 50, 86
BsaXI ACNNNNNCTCC 4 cut(s) 230, 260, 803, 833
Bsc4I CCNNNNNNNGG 4 cut(s) 233, 456, 684, 757
Bse1I ACTGG 1 cut(s) 45
BseBI CCWGG 1 cut(s) 284
BseDI CCNNGG 2 cut(s) 538, 561
BseGI GGATG 5 cut(s) 162, 477, 867, 931, 1073
BseLI CCNNNNNNNGG 4 cut(s) 233, 456, 684, 757
BseMII CTCAG 1 cut(s) 848
BseNI ACTGG 1 cut(s) 45
BseRI GAGGAG 3 cut(s) 439, 683, 899
BseXI GCAGC 3 cut(s) 195, 453, 1037
Bsh1236I CGCG 4 cut(s) 175, 366, 405, 531
BshFI GGCC 8 cut(s) 222, 287, 300, 416, 460, 677, 767, 1044
BshNI GGYRCC 1 cut(s) 323
BsiHKAI GWGCWC 2 cut(s) 375, 641
BsiSI CCGG 8 cut(s) 51, 87, 209, 316, 461, 678, 758, 769
BsiWI CGTACG 1 cut(s) 453
BslFI GGGAC 1 cut(s) 700
BslI CCNNNNNNNGG 4 cut(s) 233, 456, 684, 757
BsmAI GTCTC 1 cut(s) 935
BsmFI GGGAC 1 cut(s) 700
BsnI GGCC 8 cut(s) 222, 287, 300, 416, 460, 677, 767, 1044
Bsp1286I GDGCHC 2 cut(s) 375, 641
Bsp1407I TGTACA 1 cut(s) 159
Bsp143I GATC 5 cut(s) 177, 259, 582, 828, 847
BspANI GGCC 8 cut(s) 222, 287, 300, 416, 460, 677, 767, 1044
BspCNI CTCAG 1 cut(s) 849
BspFNI CGCG 4 cut(s) 175, 366, 405, 531
BspLI GGNNCC 5 cut(s) 213, 325, 415, 433, 676
BspMI ACCTGC 1 cut(s) 538
BspPI GGATC 3 cut(s) 185, 590, 836
BspT107I GGYRCC 1 cut(s) 323
BsrBI CCGCTC 1 cut(s) 362
BsrGI TGTACA 1 cut(s) 159
BsrI ACTGG 1 cut(s) 45
BssECI CCNNGG 2 cut(s) 538, 561
BssMI GATC 5 cut(s) 177, 259, 582, 828, 847
BssNI GRCGYC 1 cut(s) 387
Bst2UI CCWGG 1 cut(s) 284
Bst4CI ACNGT 2 cut(s) 578, 664
BstACI GRCGYC 1 cut(s) 387
BstAUI TGTACA 1 cut(s) 159
BstC8I GCNNGC 4 cut(s) 194, 280, 364, 491
BstDEI CTNAG 2 cut(s) 857, 1046
BstDSI CCRYGG 2 cut(s) 538, 561
BstF5I GGATG 5 cut(s) 162, 477, 867, 931, 1073
BstFNI CGCG 4 cut(s) 175, 366, 405, 531
BstKTI GATC 5 cut(s) 180, 262, 585, 831, 850
BstMAI GTCTC 1 cut(s) 935
BstMBI GATC 5 cut(s) 177, 259, 582, 828, 847
BstMWI GCNNNNNNNGC 5 cut(s) 189, 202, 284, 466, 1050
BstNI CCWGG 1 cut(s) 284
BstNSI RCATGY 1 cut(s) 1062
BstSCI CCNGG 4 cut(s) 208, 282, 757, 767
BstUI CGCG 4 cut(s) 175, 366, 405, 531
BstV1I GCAGC 3 cut(s) 195, 453, 1037
BstX2I RGATCY 2 cut(s) 259, 828
BstYI RGATCY 2 cut(s) 259, 828
BsuRI GGCC 8 cut(s) 222, 287, 300, 416, 460, 677, 767, 1044
BtgI CCRYGG 2 cut(s) 538, 561
BtrI CACGTC 1 cut(s) 634
BtsCI GGATG 5 cut(s) 162, 477, 867, 931, 1073
BtsI GCAGTG 1 cut(s) 846
BtsIMutI CAGTG 1 cut(s) 846
BveI ACCTGC 1 cut(s) 538
Cac8I GCNNGC 4 cut(s) 194, 280, 364, 491
CpoI CGGWCCG 1 cut(s) 526
CseI GACGC 1 cut(s) 1042
Csp6I GTAC 4 cut(s) 48, 160, 424, 454
CspI CGGWCCG 1 cut(s) 526
CviAII CATG 5 cut(s) 153, 625, 955, 979, 1059
CviQI GTAC 4 cut(s) 48, 160, 424, 454
DdeI CTNAG 2 cut(s) 857, 1046
DpnI GATC 5 cut(s) 179, 261, 584, 830, 849
DpnII GATC 5 cut(s) 177, 259, 582, 828, 847
DrdI GACNNNNNNGTC 2 cut(s) 386, 1013
DseDI GACNNNNNNGTC 2 cut(s) 386, 1013
EciI GGCGGA 1 cut(s) 346
Eco147I AGGCCT 1 cut(s) 1044
Eco32I GATATC 1 cut(s) 985
Eco47I GGWCC 5 cut(s) 212, 432, 526, 550, 748
Eco57I CTGAAG 1 cut(s) 1049
EcoRII CCWGG 1 cut(s) 282
EcoRV GATATC 1 cut(s) 985
FaeI CATG 5 cut(s) 156, 628, 958, 982, 1062
FaiI YATR 8 cut(s) 59, 154, 440, 626, 652, 956, 980, 1060
FaqI GGGAC 1 cut(s) 700
FatI CATG 5 cut(s) 152, 624, 954, 978, 1058
FauI CCCGC 2 cut(s) 422, 909
FbaI TGATCA 1 cut(s) 847
Fnu4HI GCNGC 7 cut(s) 184, 206, 360, 417, 467, 658, 1051
FokI GGATG 5 cut(s) 149, 484, 874, 938, 1080
Fsp4HI GCNGC 7 cut(s) 184, 206, 360, 417, 467, 658, 1051
FspBI CTAG 1 cut(s) 1086
GluI GCNGC 7 cut(s) 184, 206, 360, 417, 467, 658, 1051
HaeIII GGCC 8 cut(s) 222, 287, 300, 416, 460, 677, 767, 1044
HapII CCGG 8 cut(s) 51, 87, 209, 316, 461, 678, 758, 769
HgaI GACGC 1 cut(s) 1042
Hin1I GRCGYC 1 cut(s) 387
Hin1II CATG 5 cut(s) 156, 628, 958, 982, 1062
HincII GTYRAC 1 cut(s) 598
HindII GTYRAC 1 cut(s) 598
HinfI GANTC 2 cut(s) 5, 521
HpaII CCGG 8 cut(s) 51, 87, 209, 316, 461, 678, 758, 769
HphI GGTGA 5 cut(s) 337, 382, 617, 826, 931
Hpy166II GTNNAC 2 cut(s) 504, 598
Hpy188I TCNGA 8 cut(s) 236, 436, 554, 582, 699, 712, 748, 1029
Hpy188III TCNNGA 2 cut(s) 166, 1074
Hpy8I GTNNAC 2 cut(s) 504, 598
Hpy99I CGWCG 2 cut(s) 236, 410
HpyAV CCTTC 5 cut(s) 251, 363, 403, 796, 916
HpyCH4III ACNGT 2 cut(s) 578, 664
HpyCH4IV ACGT 4 cut(s) 387, 408, 600, 633
HpyCH4V TGCA 3 cut(s) 336, 493, 781
HpyF10VI GCNNNNNNNGC 5 cut(s) 189, 202, 284, 466, 1050
HpyF3I CTNAG 2 cut(s) 857, 1046
HpySE526I ACGT 4 cut(s) 387, 408, 600, 633
Hsp92I GRCGYC 1 cut(s) 387
Hsp92II CATG 5 cut(s) 156, 628, 958, 982, 1062
Ksp22I TGATCA 1 cut(s) 847
Kzo9I GATC 5 cut(s) 177, 259, 582, 828, 847
LmnI GCTCC 6 cut(s) 318, 452, 463, 721, 875, 1038
Lsp1109I GCAGC 3 cut(s) 195, 453, 1037
LweI GCATC 2 cut(s) 345, 925
MaeI CTAG 1 cut(s) 1086
MaeII ACGT 4 cut(s) 387, 408, 600, 633
MaeIII GTNAC 5 cut(s) 343, 388, 890, 1000, 1054
MalI GATC 5 cut(s) 179, 261, 584, 830, 849
MbiI CCGCTC 1 cut(s) 362
MboI GATC 5 cut(s) 177, 259, 582, 828, 847
MboII GAAGA 2 cut(s) 106, 808
MflI RGATCY 2 cut(s) 259, 828
MhlI GDGCHC 2 cut(s) 375, 641
MluCI AATT 2 cut(s) 496, 1077
MmeI TCCRAC 5 cut(s) 214, 459, 498, 560, 690
MseI TTAA 1 cut(s) 737
MslI CAYNNNNRTG 1 cut(s) 644
MspA1I CMGCKG 1 cut(s) 186
MspI CCGG 8 cut(s) 51, 87, 209, 316, 461, 678, 758, 769
MspR9I CCNGG 4 cut(s) 210, 284, 759, 769
MvaI CCWGG 1 cut(s) 284
MvnI CGCG 4 cut(s) 175, 366, 405, 531
MwoI GCNNNNNNNGC 5 cut(s) 189, 202, 284, 466, 1050
NciI CCSGG 3 cut(s) 210, 759, 769
NdeII GATC 5 cut(s) 177, 259, 582, 828, 847
NlaIII CATG 5 cut(s) 156, 628, 958, 982, 1062
NlaIV GGNNCC 5 cut(s) 213, 325, 415, 433, 676
NmeAIII GCCGAG 1 cut(s) 964
NmuCI GTSAC 3 cut(s) 343, 388, 1054
NspI RCATGY 1 cut(s) 1062
OliI CACNNNNGTG 1 cut(s) 644
PceI AGGCCT 1 cut(s) 1044
PciI ACATGT 1 cut(s) 1058
PcsI WCGNNNNNNNCGW 3 cut(s) 402, 432, 591
PfeI GAWTC 2 cut(s) 5, 521
Pfl23II CGTACG 1 cut(s) 453
PflFI GACNNNGTC 1 cut(s) 440
PkrI GCNGC 7 cut(s) 185, 207, 361, 418, 468, 659, 1052
PscI ACATGT 1 cut(s) 1058
Psp6I CCWGG 1 cut(s) 282
PspGI CCWGG 1 cut(s) 282
PspLI CGTACG 1 cut(s) 453
PspN4I GGNNCC 5 cut(s) 213, 325, 415, 433, 676
PsuI RGATCY 2 cut(s) 259, 828
PsyI GACNNNGTC 1 cut(s) 440
RsaI GTAC 4 cut(s) 49, 161, 425, 455
RsaNI GTAC 4 cut(s) 48, 160, 424, 454
RseI CAYNNNNRTG 1 cut(s) 644
Rsr2I CGGWCCG 1 cut(s) 526
RsrII CGGWCCG 1 cut(s) 526
SaqAI TTAA 1 cut(s) 737
SatI GCNGC 7 cut(s) 184, 206, 360, 417, 467, 658, 1051
Sau3AI GATC 5 cut(s) 177, 259, 582, 828, 847
ScrFI CCNGG 4 cut(s) 210, 284, 759, 769
SduI GDGCHC 2 cut(s) 375, 641
SfaNI GCATC 2 cut(s) 345, 925
SinI GGWCC 5 cut(s) 212, 432, 526, 550, 748
SmiMI CAYNNNNRTG 1 cut(s) 644
Sse9I AATT 2 cut(s) 496, 1077
SseBI AGGCCT 1 cut(s) 1044
SspI AATATT 1 cut(s) 742
SspMI CTAG 1 cut(s) 1086
StuI AGGCCT 1 cut(s) 1044
StyD4I CCNGG 4 cut(s) 208, 282, 757, 767
TaaI ACNGT 2 cut(s) 578, 664
TaiI ACGT 4 cut(s) 390, 411, 603, 636
TaqI TCGA 3 cut(s) 252, 620, 774
TaqII GACCGA 1 cut(s) 514
TasI AATT 2 cut(s) 496, 1077
TatI WGTACW 1 cut(s) 159
TauI GCSGC 4 cut(s) 208, 362, 419, 660
TfiI GAWTC 2 cut(s) 5, 521
Tru1I TTAA 1 cut(s) 737
Tru9I TTAA 1 cut(s) 737
TscAI CASTG 1 cut(s) 846
TseFI GTSAC 3 cut(s) 343, 388, 1054
TseI GCWGC 3 cut(s) 183, 466, 1050
Tsp45I GTSAC 3 cut(s) 343, 388, 1054
TspDTI ATGAA 1 cut(s) 815
TspGWI ACGGA 2 cut(s) 527, 550
TspRI CASTG 1 cut(s) 846
Tth111I GACNNNGTC 1 cut(s) 440
VpaK11BI GGWCC 5 cut(s) 212, 432, 526, 550, 748
XapI RAATTY 1 cut(s) 496
XceI RCATGY 1 cut(s) 1062
XcmI CCANNNNNNNNNTGG 1 cut(s) 514
XspI CTAG 1 cut(s) 1086
ZraI GACGTC 1 cut(s) 388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.