MD06G1075700.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
18772143 .. 18772607
465 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1075700.v1.1.491

Sequence Viewer

Length: 465 bp
ATGAAAGAAACTTTGCGCTTGCATCCAACCCTGCCTCTGTTAGTCTGTCATTGCCCAAGTGAAACATGCATTGTGGGAGGCTACACCATTCCGAAAGGATCTATGATTTTCATCAATGTTTGGACCACACACATAGACCCTTCGATTTGGGAAAACCCGTTGGAGTTCGATCCGGAGAGGTTCTTGGACATCAAATGGGACTACAATGGGAAAGACCTCAACAAATTTCCATTTGGGTCAGGCACAAGAATATGTGTTGGGATTGTAATGGATGAGAGTATGGTGATGCATTCTTTCAACTGGAAATTTCCAGAGGGAGAGAAGTTGGATCTTTTTGAGAAGTTTCGGATTGTGTTGAAGAAGAAGCTTCCTTTGGTTGCCATCCCAACTCCAAGGTTATCAGATCCAGCATTCTATGAGTTGAACAATGCTGCTATCAAATTCCTTAAAATACTTCACTTGTAA

Protein Analysis

155

Amino Acids

17.81

Weight (kDa)

6.95

Isoelectric Point (pI)

27.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 123 6.6e-30 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000377)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G12300 AT4G12310 AT4G12320 AT4G12330 AT4G22690 AT4G22710 AT5G44620
fragaria_vesca FvH4_3g36340 FvH4_4g05231 FvH4_5g00500 FvH4_5g00510 FvH4_7g17980
malus_domestica MD02G1257600.v1.1 MD04G1080300.v1.1 MD06G1075700.v1.1
prunus_persica Prupe.1G090700_v2.0.a1 Prupe.5G071500_v2.0.a1 Prupe.5G077600_v2.0.a1 Prupe.5G077700_v2.0.a1 Prupe.5G077800_v2.0.a1 Prupe.5G077900_v2.0.a1 Prupe.5G078100_v2.0.a1 Prupe.5G078200_v2.0.a1 Prupe.5G078300_v2.0.a1
pyrus_communis pycom04g07220 pycom04g07240 pycom06g05480 pycom15g15400
rosa_chinensis RchiOBHm_Chr5g0018741 RchiOBHm_Chr6g0248821 RchiOBHm_Chr7g0178901 RchiOBHm_Chr7g0201891 RchiOBHm_Chr7g0201961 RchiOBHm_Chr7g0201971 RchiOBHm_Chr7g0201981 RchiOBHm_Chr7g0201991 RchiOBHm_Chr7g0202001
rosa_laevigata RLG00000003634 RLG00000003636 RLG00000003637 RLG00000003638 RLG00000003644
rosa_multiflora Rmu_co8316029.1_g000001 Rmu_sc0000637.1_g000020 Rmu_sc0000637.1_g000025 Rmu_sc0000637.1_g000027 Rmu_sc0001030.1_g000027 Rmu_sc0006420.1_g000002 Rmu_sc0012276.1_g000002 Rmu_sc0012276.1_g000005 Rmu_sc0012276.1_g000011 Rmu_sc0012276.1_g000012 Rmu_sc0012276.1_g000017 Rmu_sc0014024.1_g000001 Rmu_ssc0000125.1_g000026
rosa_roxburghii Rroxscaffold_2G00077750 Rroxscaffold_2G00113690 Rroxscaffold_3G00254960 Rroxscaffold_3G00254970 Rroxscaffold_3G00254980 Rroxscaffold_3G00255010 Rroxscaffold_3G00255020 Rroxscaffold_5G00357760 Rroxscaffold_5G00357810
rosa_rugosa Rorug05G0288400 Rorug05G0288500 Rorug07G0066500 Rorug07G0066700 Rorug07G0066800 Rorug07G0066800 Rorug07G0066900 Rorug07G0066900 Rorug07G0067000 Rorug07G0067100 Rorug07G0067200.1
rosa_samantha Rh3DG308900 Rh4AG183200 Rh4CG451700 Rh5BG064200 Rh7AG193800 Rh7AG194000 Rh7AG194300 Rh7AG194400 Rh7BG195400 Rh7BG195600 Rh7BG195700 Rh7BG195800 Rh7BG195900 Rh7CG205300 Rh7CG205500 Rh7CG205600 Rh7CG205700 Rh7DG020100 Rh7DG199900 Rh7DG200600 Rh7DG200700 Rh7DG200900 Rh7DG201000 Rh7DG201100
rosa_wichuraiana Rw7G016940 Rw7G016980 Rw7G016990 Rw7G017010 Rw7G017020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 172
AclWI GGATC 4 cut(s) 106, 164, 336, 398
AcsI RAATTY 3 cut(s) 224, 305, 440
AgsI TTSAA 3 cut(s) 298, 358, 424
AjuI GAANNNNNNNTTGG 2 cut(s) 356, 388
AluBI AGCT 1 cut(s) 367
AluI AGCT 1 cut(s) 367
AlwI GGATC 4 cut(s) 106, 164, 336, 398
Aor13HI TCCGGA 1 cut(s) 172
ApeKI GCWGC 1 cut(s) 431
ApoI RAATTY 3 cut(s) 224, 305, 440
AspLEI GCGC 1 cut(s) 18
AspS9I GGNCC 1 cut(s) 123
AsuHPI GGTGA 1 cut(s) 295
AvaII GGWCC 1 cut(s) 123
BbvI GCAGC 1 cut(s) 418
BccI CCATC 1 cut(s) 389
BisI GCNGC 1 cut(s) 432
BlsI GCNGC 1 cut(s) 433
Bme18I GGWCC 1 cut(s) 123
BmgT120I GGNCC 1 cut(s) 123
BmsI GCATC 2 cut(s) 31, 276
BsaBI GATNNNNATC 1 cut(s) 110
BsaJI CCNNGG 1 cut(s) 392
BsaWI WCCGGW 1 cut(s) 172
Bse1I ACTGG 1 cut(s) 305
Bse3DI GCAATG 1 cut(s) 49
Bse8I GATNNNNATC 1 cut(s) 110
BseAI TCCGGA 1 cut(s) 172
BseDI CCNNGG 1 cut(s) 392
BseGI GGATG 3 cut(s) 22, 277, 381
BseJI GATNNNNATC 1 cut(s) 110
BseMI GCAATG 1 cut(s) 49
BseNI ACTGG 1 cut(s) 305
BseXI GCAGC 1 cut(s) 418
BsiSI CCGG 1 cut(s) 173
BslFI GGGAC 1 cut(s) 212
BsmFI GGGAC 1 cut(s) 212
BsmI GAATGC 2 cut(s) 289, 410
Bsp13I TCCGGA 1 cut(s) 172
Bsp143I GATC 4 cut(s) 98, 169, 328, 403
BspEI TCCGGA 1 cut(s) 172
BspPI GGATC 4 cut(s) 106, 164, 336, 398
BsrDI GCAATG 1 cut(s) 49
BsrI ACTGG 1 cut(s) 305
BssECI CCNNGG 1 cut(s) 392
BssMI GATC 4 cut(s) 98, 169, 328, 403
BssT1I CCWWGG 1 cut(s) 392
BstC8I GCNNGC 1 cut(s) 20
BstF5I GGATG 3 cut(s) 22, 277, 381
BstHHI GCGC 1 cut(s) 18
BstKTI GATC 4 cut(s) 101, 172, 331, 406
BstMBI GATC 4 cut(s) 98, 169, 328, 403
BstNSI RCATGY 1 cut(s) 69
BstV1I GCAGC 1 cut(s) 418
BstX2I RGATCY 3 cut(s) 98, 328, 403
BstYI RGATCY 3 cut(s) 98, 328, 403
BtsCI GGATG 3 cut(s) 22, 277, 381
Cac8I GCNNGC 1 cut(s) 20
CfoI GCGC 1 cut(s) 18
Cfr13I GGNCC 1 cut(s) 123
CviAII CATG 1 cut(s) 66
CviJI RGCY 2 cut(s) 81, 367
CviKI_1 RGCY 2 cut(s) 81, 367
DpnI GATC 4 cut(s) 100, 171, 330, 405
DpnII GATC 4 cut(s) 98, 169, 328, 403
Eco130I CCWWGG 1 cut(s) 392
Eco47I GGWCC 1 cut(s) 123
EcoT14I CCWWGG 1 cut(s) 392
EcoT22I ATGCAT 2 cut(s) 71, 291
ErhI CCWWGG 1 cut(s) 392
FaeI CATG 1 cut(s) 69
FaiI YATR 6 cut(s) 67, 104, 134, 253, 281, 417
FaqI GGGAC 1 cut(s) 212
FatI CATG 1 cut(s) 65
Fnu4HI GCNGC 1 cut(s) 432
FokI GGATG 3 cut(s) 9, 284, 368
Fsp4HI GCNGC 1 cut(s) 432
GlaI GCGC 1 cut(s) 17
GluI GCNGC 1 cut(s) 432
HapII CCGG 1 cut(s) 173
HhaI GCGC 1 cut(s) 18
Hin1II CATG 1 cut(s) 69
Hin6I GCGC 1 cut(s) 16
HinP1I GCGC 1 cut(s) 16
HindIII AAGCTT 1 cut(s) 365
HpaII CCGG 1 cut(s) 173
HphI GGTGA 1 cut(s) 295
Hpy188I TCNGA 3 cut(s) 93, 348, 403
Hpy188III TCNNGA 2 cut(s) 173, 311
HpyAV CCTTC 1 cut(s) 150
HpyCH4V TGCA 3 cut(s) 22, 69, 289
Hsp92II CATG 1 cut(s) 69
HspAI GCGC 1 cut(s) 16
Kpn2I TCCGGA 1 cut(s) 172
Kzo9I GATC 4 cut(s) 98, 169, 328, 403
LpnPI CCDG 6 cut(s) 44, 186, 225, 286, 324, 420
Lsp1109I GCAGC 1 cut(s) 418
LweI GCATC 2 cut(s) 31, 276
MalI GATC 4 cut(s) 100, 171, 330, 405
MboI GATC 4 cut(s) 98, 169, 328, 403
MboII GAAGA 2 cut(s) 370, 373
MflI RGATCY 3 cut(s) 98, 328, 403
MluCI AATT 3 cut(s) 224, 305, 440
MmeI TCCRAC 3 cut(s) 50, 141, 306
MnlI CCTC 5 cut(s) 45, 71, 171, 227, 307
Mph1103I ATGCAT 2 cut(s) 71, 291
MroI TCCGGA 1 cut(s) 172
MseI TTAA 1 cut(s) 447
MspI CCGG 1 cut(s) 173
Mva1269I GAATGC 2 cut(s) 289, 410
NdeII GATC 4 cut(s) 98, 169, 328, 403
NlaIII CATG 1 cut(s) 69
NsiI ATGCAT 2 cut(s) 71, 291
NspI RCATGY 1 cut(s) 69
PctI GAATGC 2 cut(s) 289, 410
PkrI GCNGC 1 cut(s) 433
PspPI GGNCC 1 cut(s) 123
PsuI RGATCY 3 cut(s) 98, 328, 403
SaqAI TTAA 1 cut(s) 447
SatI GCNGC 1 cut(s) 432
Sau3AI GATC 4 cut(s) 98, 169, 328, 403
Sau96I GGNCC 1 cut(s) 123
SetI ASST 4 cut(s) 182, 219, 369, 398
SfaNI GCATC 2 cut(s) 31, 276
SinI GGWCC 1 cut(s) 123
Sse9I AATT 3 cut(s) 224, 305, 440
StyI CCWWGG 1 cut(s) 392
TaqI TCGA 2 cut(s) 143, 168
TasI AATT 3 cut(s) 224, 305, 440
Tru1I TTAA 1 cut(s) 447
Tru9I TTAA 1 cut(s) 447
TseI GCWGC 1 cut(s) 431
TspDTI ATGAA 2 cut(s) 17, 100
VpaK11BI GGWCC 1 cut(s) 123
XapI RAATTY 3 cut(s) 224, 305, 440
XceI RCATGY 1 cut(s) 69
Zsp2I ATGCAT 2 cut(s) 71, 291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.