Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0000678

Physical Location & Seq

Genomic Coordinates Forward (+)

32155904 .. 32162582

Gene Structure 6679 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1243200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

ATGCTATCAGACACTCACCCGCAAGACTCAGACGATAATGTGCAGCTAAAACTCGACAAATTTATGTCCCGAACCCGAAGTGCATCAGTTTCCATCCCTATGAGCTCTATGGACTCGTCATATGAAGGGAAACCAAGACTTGTAGGTCATACTGGTCCATTAAGGAGTCAAAGCAAAACTCTTTTCGTACCTATGAGCGGTCCATTATATGCTAACCGCAGGCCTGATAGCATTTTCCGGCCAGTTCAAGCTCCAACAGCAGGGCAAGAAGCGGTGGAACCTGCAGGAGAAAAGTTTCCTTCTACCAATGCAACAACTGAGACTGAATGGGCGGGTGAAAACTATGTGGGTAAAAATGAACACTTGCTGAGATCTGGCCAACTGGGGCTGTGCAATGATCCTTACTGCACAACTTGCCCAACATTCAATCTCAAGGCTGCTCAAGCGAAACATCGAAGGGCCTCAGATATATTTGATCCCAAGTTCCATAATGCTCTGTATGGGGATGCCAAAGGCTGGGCAAGGAGATTTTTCTCTTTTCTGCGTCCATATATTCCTGGAGTTATGAACCCTCATGCTAAATTTGTGCAACAGTGGAACAAGTTTTTCGTCATTTCTTGCTTAATATCAATTTTTGTAGATCCGTTGTTTTTCTTCCTGCTGTCCGTTGAAAAGGAGAATAGCTGTATAGTTATTGATTGGCCCTTGACGACAACACTTGTGGTATTTAGAAGCATCACTGATTTCATATTCCTACTGCACATACTCCTTCAGTTTAGATTGGCTTATGTGGCTCCTGAGTCTAGGGTGGTTGGTGCTGGCGAGTTAGTTGACCATCCGAAGAAAATCGCTTTGAATTACCTTCAAGGATATTTTCTACTAGACCTTTTTATTGTATTACCGCTGCCTCAGATCATAATACTGTTAGTTCTACGAAACACCTTGGGATTAACAGGAGCAAACCATGCAAAAAATCTTTTACGTGCTGCAGTTCTTCTTCAGTATATTCCCAGGTTGTTTAGGTTTCTACCGTTTCTTGCTGGTCAGACTCCAAGTGGCTTCATATTTGAGTCAGCATGGGCAAATTTTATAATAAATCTTCTCACTTTTGTGTTGTCTGGCCACGTTGTTGGATCGTGCTGGTACCTCTTTGGGCTACAGAGGGTTAATCAATGTTTTCGAGAGGCCTGCCATAACTCTGCAATTGCTGAGTGTATGGACTTCCTAGATTGTGGGCATGGAAGTCAAACTGAAGATTCTAAAGCAGATGATCCATCACGTGATAGCTGGAGAAACAATGTGAATGTTACTGCTTGTTTAACTGCAGATGGCTTTGATTACGGAATTTACGTCCAAGCTGTCAATCTTACAACAGAAAATAGTATAGTCACTAGATATGTGTATGGATTATTTTGGGGATTCCAGCAAATCAGCACCCTGGCTGGAAATCAAGTTCCAAGCTATTTTGTTTGGGAAGTCCTTTTTACAATGGCCATCATTGGCCTAGGTCTCTTGCTTTTCGCTCTTCTTATTGGAAATATGCAGAACTTTCTGCAGGCTCTTGGCCGGAGACAGTTAGAAATGTCCCTGAGACGTCGTGATGTTGAGCAGTGGATGAGCCATAGGCGCTTACCAGAGGAACTTAGAAGGCGAGTACGAGAAGCTGAGCGGTACAATTGGGCAGCAACCAGAGGAGTAAATGAAGAAATGCTTTTGGAAGTCCTGCCTGAAGACCTTCAGACGGATATAAGACGCCATCTCTTCACGTTCATTAAGAAAGTACGAATTTTTGCCCTGATGGATGAACCCATCTTAGATTCCATTTGTGGAAGATTAAGGCAAAAGACATACATCAACAGAAGTATAGTTTTGTCCCGTGGTGGTCTCATCGAGAAGATGGTTTTTATAGTGAGGGGAAAAATGGAGAGCATTGGAGAAGATGGGAATAGAATTTCTTTATCTGAAGGAGACGTTTGTGGTGAGGAACTTCTCGCATGGTGTCTTGAGCATTCTTCAGTAAACAAAGATGGTAAAAAGATCAGGATTCCCGGACAGCGGTTGCTTAGCAACAGGATGGTAAGATGCTCAACAAACGTTGAAGCATTTTCACTCCGAGCAGCTGACATTGAAGAAGTCACCAGTGTTTTCTCCAGATTCTTGCGCAAACCACGTGTTCAAGGAGCCATAAGGTATGAGTCACCTTACTGGAGAGGCCTTGCAGCAAGATGCATTCAAGTAGCATGGAGATACAGGAAAAAACGCCTACAGCGAGCCGACTTGTCTCAGTCTCAATCTCATTCTCAACCCCAATCTCAATCCCAATCCAATAATGCATTGTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009624 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans

Protein Analysis

781

Amino Acids

88.79

Weight (kDa)

9.13

Isoelectric Point (pI)

52.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	199 - 524	2.5e-18	Ion transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000678)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17700 AT3G17700
fragaria_vesca	FvH4_5g18080 FvH4_5g18080 FvH4_5g18080 FvH4_6g44780
malus_domestica	MD06G1236300.v1.1 MD09G1093300.v1.1 MD14G1243200.v1.1
prunus_persica	Prupe.1G183800_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1
pyrus_communis	pycom06g21110 pycom06g21140 pycom06g21190 pycom14g20450
rosa_chinensis	RchiOBHm_Chr2g0161941 RchiOBHm_Chr4g0441651 RchiOBHm_Chr5g0083381 RchiOBHm_Chr6g0281101 RchiOBHm_Chr7g0177531
rosa_laevigata	RLG00000005528 RLG00000015203 RLG00000015445 RLG00000021309 RLG00000023742 RLG00000034422 RLG00000036136
rosa_multiflora	Rmu_co8432259.1_g000001 Rmu_co8481019.1_g000001 Rmu_sc0003410.1_g000009 Rmu_sc0004618.1_g000030 Rmu_sc0005144.1_g000007 Rmu_sc0008565.1_g000001 Rmu_sc0018381.1_g000003 Rmu_ssc0000330.1_g000004
rosa_roxburghii	Rroxscaffold_1G00051700 Rroxscaffold_2G00088450 Rroxscaffold_2G00116130 Rroxscaffold_2G00126580 Rroxscaffold_3G00275780 Rroxscaffold_5G00338690 Rroxscaffold_5G00375080
rosa_rugosa	Rorug02G0493400 Rorug04G0058900 Rorug04G0059000 Rorug06G0407100
rosa_samantha	Rh2AG220400 Rh2AG282700 Rh2AG329100 Rh2AG559300 Rh2BG572700 Rh2CG542900 Rh2DG582500 Rh4AG135300 Rh4BG096100 Rh4DG026800 Rh4DG329100 Rh5CG271500 Rh6DG096900 Rh7AG006400 Rh7BG006300 Rh7CG006800 Rh7DG006400 Rh7DG278200
rosa_wichuraiana	Rw0G014790 Rw1G017310 Rw7G000530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1091, 2341
AasI	GACNNNNNNGTC	1 cut(s)	144
AatII	GACGTC	1 cut(s)	1597
Acc16I	TGCGCA	1 cut(s)	2162
Acc36I	ACCTGC	1 cut(s)	289
Acc65I	GGTACC	1 cut(s)	1143
AccB1I	GGYRCC	1 cut(s)	1143
AccB7I	CCANNNNNTGG	1 cut(s)	516
AccBSI	CCGCTC	2 cut(s)	198, 1669
AciI	CCGC	8 cut(s)	20, 198, 217, 272, 332, 902, 1669, 2056
AclI	AACGTT	1 cut(s)	2094
AclWI	GGATC	5 cut(s)	392, 470, 635, 1141, 1265
AcoI	YGGCCR	5 cut(s)	239, 376, 1120, 1491, 1564
AcsI	RAATTY	6 cut(s)	59, 581, 1084, 1344, 1785, 1950
AcuI	CTGAAG	7 cut(s)	755, 983, 1272, 1721, 1749, 1983, 1998
AcvI	CACGTG	2 cut(s)	1280, 2171
AcyI	GRCGYC	2 cut(s)	1594, 1753
AfaI	GTAC	5 cut(s)	189, 1145, 1656, 1673, 1782
AfiI	CCNNNNNNNGG	5 cut(s)	197, 260, 516, 1741, 2055
AflIII	ACRYGT	1 cut(s)	2170
AgsI	TTSAA	9 cut(s)	248, 427, 671, 856, 866, 2099, 2129, 2177, 2234
AjnI	CCWGG	3 cut(s)	556, 1010, 1437
AleI	CACNNNNGTG	1 cut(s)	1109
AloI	GAACNNNNNNTCC	2 cut(s)	1437, 1469
AluBI	AGCT	9 cut(s)	46, 105, 251, 684, 1287, 1358, 1461, 1664, 2120
AluI	AGCT	9 cut(s)	46, 105, 251, 684, 1287, 1358, 1461, 1664, 2120
Alw21I	GWGCWC	1 cut(s)	107
Alw26I	GTCTC	8 cut(s)	314, 1514, 1564, 1585, 1889, 1962, 2286, 2292
AlwI	GGATC	5 cut(s)	392, 470, 635, 1141, 1265
ApeKI	GCWGC	7 cut(s)	43, 437, 904, 986, 1682, 2117, 2219
ApoI	RAATTY	6 cut(s)	59, 581, 1084, 1344, 1785, 1950
Asp700I	GAANNNNTTC	2 cut(s)	294, 1734
Asp718I	GGTACC	1 cut(s)	1143
AspA2I	CCTAGG	1 cut(s)	1504
AspLEI	GCGC	2 cut(s)	1629, 2163
AspS9I	GGNCC	4 cut(s)	155, 200, 459, 702
AsuC2I	CCSGG	1 cut(s)	2049
AsuHPI	GGTGA	5 cut(s)	8, 347, 1991, 2128, 2190
AvaII	GGWCC	2 cut(s)	155, 200
AvrII	CCTAGG	1 cut(s)	1504
BalI	TGGCCA	3 cut(s)	378, 1122, 1493
BanI	GGYRCC	1 cut(s)	1143
BanII	GRGCYC	1 cut(s)	107
BbrPI	CACGTG	2 cut(s)	1280, 2171
BbsI	GAAGAC	1 cut(s)	1737
Bbv12I	GWGCWC	1 cut(s)	107
BbvI	GCAGC	7 cut(s)	55, 424, 891, 973, 1694, 2129, 2231
BcgI	CGANNNNNNTGC	2 cut(s)	1170, 1204
BciT130I	CCWGG	3 cut(s)	558, 1012, 1439
BcnI	CCSGG	1 cut(s)	2049
BcoDI	GTCTC	8 cut(s)	314, 1514, 1564, 1585, 1889, 1962, 2286, 2292
BfaI	CTAG	5 cut(s)	804, 881, 1226, 1392, 1505
BfmI	CTRYAG	6 cut(s)	282, 987, 1157, 1323, 1553, 2264
BfoI	RGCGCY	1 cut(s)	1630
BfuAI	ACCTGC	1 cut(s)	289
BglII	AGATCT	1 cut(s)	371
BisI	GCNGC	7 cut(s)	44, 438, 905, 987, 1683, 2118, 2220
BlnI	CCTAGG	1 cut(s)	1504
BlpI	GCTNAGC	2 cut(s)	1665, 2063
BlsI	GCNGC	7 cut(s)	45, 439, 906, 988, 1684, 2119, 2221
Bme1390I	CCNGG	4 cut(s)	558, 1012, 1439, 2049
Bme18I	GGWCC	2 cut(s)	155, 200
BmgT120I	GGNCC	4 cut(s)	155, 200, 459, 702
BmiI	GGNNCC	4 cut(s)	279, 795, 1145, 2182
BmrFI	CCNGG	4 cut(s)	558, 1012, 1439, 2049
BmrI	ACTGGG	1 cut(s)	392
BmsI	GCATC	5 cut(s)	92, 496, 744, 2072, 2216
BmuI	ACTGGG	1 cut(s)	392
BpiI	GAAGAC	1 cut(s)	1737
BpmI	CTGGAG	4 cut(s)	579, 1309, 2134, 2227
Bpu1102I	GCTNAGC	2 cut(s)	1665, 2063
BpuEI	CTTGAG	3 cut(s)	416, 426, 2024
BpuMI	CCSGG	1 cut(s)	2049
BsaAI	YACGTR	3 cut(s)	983, 1280, 2171
BsaHI	GRCGYC	2 cut(s)	1594, 1753
BsaI	GGTCTC	2 cut(s)	1514, 1889
BsaJI	CCNNGG	5 cut(s)	942, 1010, 1437, 1504, 1876
Bsc4I	CCNNNNNNNGG	5 cut(s)	197, 260, 516, 1741, 2055
Bse1I	ACTGG	5 cut(s)	157, 242, 387, 2139, 2210
Bse3DI	GCAATG	1 cut(s)	400
BseBI	CCWGG	3 cut(s)	558, 1012, 1439
BseDI	CCNNGG	5 cut(s)	942, 1010, 1437, 1504, 1876
BseGI	GGATG	6 cut(s)	93, 511, 835, 1620, 1807, 2079
BseLI	CCNNNNNNNGG	5 cut(s)	197, 260, 516, 1741, 2055
BseMI	GCAATG	1 cut(s)	400
BseNI	ACTGG	5 cut(s)	157, 242, 387, 2139, 2210
BseRI	GAGGAG	1 cut(s)	1707
BseXI	GCAGC	7 cut(s)	55, 424, 891, 973, 1694, 2129, 2231
BseYI	CCCAGC	1 cut(s)	516
BsgI	GTGCAG	3 cut(s)	62, 391, 743
BshNI	GGYRCC	1 cut(s)	1143
BsiHKAI	GWGCWC	1 cut(s)	107
BsiSI	CCGG	3 cut(s)	238, 1567, 2049
BslFI	GGGAC	3 cut(s)	52, 1570, 1858
BslI	CCNNNNNNNGG	5 cut(s)	197, 260, 516, 1741, 2055
BsmAI	GTCTC	8 cut(s)	314, 1514, 1564, 1585, 1889, 1962, 2286, 2292
BsmBI	CGTCTC	2 cut(s)	1585, 1962
BsmFI	GGGAC	3 cut(s)	52, 1570, 1858
BsmI	GAATGC	2 cut(s)	2008, 2229
Bso31I	GGTCTC	2 cut(s)	1514, 1889
Bsp1286I	GDGCHC	1 cut(s)	107
Bsp143I	GATC	8 cut(s)	371, 397, 475, 640, 912, 1133, 1270, 2037
Bsp1720I	GCTNAGC	2 cut(s)	1665, 2063
BspACI	CCGC	8 cut(s)	20, 198, 217, 272, 332, 902, 1669, 2056
BspLI	GGNNCC	4 cut(s)	279, 795, 1145, 2182
BspMAI	CTGCAG	4 cut(s)	286, 991, 1327, 1557
BspMI	ACCTGC	1 cut(s)	289
BspPI	GGATC	5 cut(s)	392, 470, 635, 1141, 1265
BspQI	GCTCTTC	1 cut(s)	1530
BspT107I	GGYRCC	1 cut(s)	1143
BspTNI	GGTCTC	2 cut(s)	1514, 1889
BsrBI	CCGCTC	2 cut(s)	198, 1669
BsrDI	GCAATG	1 cut(s)	400
BsrI	ACTGG	5 cut(s)	157, 242, 387, 2139, 2210
BssECI	CCNNGG	5 cut(s)	942, 1010, 1437, 1504, 1876
BssMI	GATC	8 cut(s)	371, 397, 475, 640, 912, 1133, 1270, 2037
BssNI	GRCGYC	2 cut(s)	1594, 1753
BssT1I	CCWWGG	2 cut(s)	942, 1504
Bst2UI	CCWGG	3 cut(s)	558, 1012, 1439
Bst4CI	ACNGT	4 cut(s)	594, 924, 1032, 1575
Bst6I	CTCTTC	2 cut(s)	1530, 1766
BstACI	GRCGYC	2 cut(s)	1594, 1753
BstAPI	GCANNNNNTGC	2 cut(s)	414, 965
BstBAI	YACGTR	3 cut(s)	983, 1280, 2171
BstC8I	GCNNGC	5 cut(s)	221, 820, 1189, 1557, 2271
BstDSI	CCRYGG	1 cut(s)	1876
BstF5I	GGATG	6 cut(s)	93, 511, 835, 1620, 1807, 2079
BstH2I	RGCGCY	1 cut(s)	1630
BstHHI	GCGC	2 cut(s)	1629, 2163
BstKTI	GATC	8 cut(s)	374, 400, 478, 643, 915, 1136, 1273, 2040
BstMAI	GTCTC	8 cut(s)	314, 1514, 1564, 1585, 1889, 1962, 2286, 2292
BstMBI	GATC	8 cut(s)	371, 397, 475, 640, 912, 1133, 1270, 2037
BstMWI	GCNNNNNNNGC	6 cut(s)	257, 414, 443, 791, 965, 1626
BstNI	CCWGG	3 cut(s)	558, 1012, 1439
BstSCI	CCNGG	4 cut(s)	556, 1010, 1437, 2047
BstSFI	CTRYAG	6 cut(s)	282, 987, 1157, 1323, 1553, 2264
BstV1I	GCAGC	7 cut(s)	55, 424, 891, 973, 1694, 2129, 2231
BstV2I	GAAGAC	1 cut(s)	1737
BstX2I	RGATCY	2 cut(s)	371, 640
BstXI	CCANNNNNNTGG	1 cut(s)	1130
BstYI	RGATCY	2 cut(s)	371, 640
BtgI	CCRYGG	1 cut(s)	1876
BtsCI	GGATG	6 cut(s)	93, 511, 835, 1620, 1807, 2079
BtsI	GCAGTG	1 cut(s)	1616
BtsIMutI	CAGTG	4 cut(s)	599, 738, 1616, 2146
BveI	ACCTGC	1 cut(s)	289
Cac8I	GCNNGC	5 cut(s)	221, 820, 1189, 1557, 2271
CfoI	GCGC	2 cut(s)	1629, 2163
Cfr13I	GGNCC	4 cut(s)	155, 200, 459, 702
CseI	GACGC	2 cut(s)	533, 1761
Csp6I	GTAC	5 cut(s)	188, 1144, 1655, 1672, 1781
CspCI	CAANNNNNGTGG	2 cut(s)	702, 737
CviAII	CATG	6 cut(s)	575, 965, 1077, 1238, 1995, 2241
CviQI	GTAC	5 cut(s)	188, 1144, 1655, 1672, 1781
DpnI	GATC	8 cut(s)	373, 399, 477, 642, 914, 1135, 1272, 2039
DpnII	GATC	8 cut(s)	371, 397, 475, 640, 912, 1133, 1270, 2037
DrdI	GACNNNNNNGTC	1 cut(s)	144
DseDI	GACNNNNNNGTC	1 cut(s)	144
EaeI	YGGCCR	5 cut(s)	239, 376, 1120, 1491, 1564
Eam1104I	CTCTTC	2 cut(s)	1530, 1766
EarI	CTCTTC	2 cut(s)	1530, 1766
Ecl136II	GAGCTC	1 cut(s)	105
Eco130I	CCWWGG	2 cut(s)	942, 1504
Eco147I	AGGCCT	3 cut(s)	223, 1187, 2214
Eco24I	GRGCYC	1 cut(s)	107
Eco31I	GGTCTC	2 cut(s)	1514, 1889
Eco47I	GGWCC	2 cut(s)	155, 200
Eco53kI	GAGCTC	1 cut(s)	105
Eco57I	CTGAAG	7 cut(s)	755, 983, 1272, 1721, 1749, 1983, 1998
Eco72I	CACGTG	2 cut(s)	1280, 2171
EcoICRI	GAGCTC	1 cut(s)	105
EcoO109I	RGGNCCY	1 cut(s)	459
EcoRII	CCWGG	3 cut(s)	556, 1010, 1437
EcoT14I	CCWWGG	2 cut(s)	942, 1504
EcoT22I	ATGCAT	2 cut(s)	2231, 2335
EcoT38I	GRGCYC	1 cut(s)	107
ErhI	CCWWGG	2 cut(s)	942, 1504
Esp3I	CGTCTC	2 cut(s)	1585, 1962
FaeI	CATG	6 cut(s)	578, 968, 1080, 1241, 1998, 2244
FalI	AAGNNNNNCTT	2 cut(s)	1695, 1727
FaqI	GGGAC	3 cut(s)	52, 1570, 1858
FatI	CATG	6 cut(s)	574, 964, 1076, 1237, 1994, 2240
FauI	CCCGC	2 cut(s)	27, 325
FauNDI	CATATG	1 cut(s)	121
Fnu4HI	GCNGC	7 cut(s)	44, 438, 905, 987, 1683, 2118, 2220
FokI	GGATG	6 cut(s)	80, 518, 822, 1627, 1814, 2086
FriOI	GRGCYC	1 cut(s)	107
Fsp4HI	GCNGC	7 cut(s)	44, 438, 905, 987, 1683, 2118, 2220
FspBI	CTAG	5 cut(s)	804, 881, 1226, 1392, 1505
FspI	TGCGCA	1 cut(s)	2162
GlaI	GCGC	2 cut(s)	1628, 2162
GluI	GCNGC	7 cut(s)	44, 438, 905, 987, 1683, 2118, 2220
GsaI	CCCAGC	1 cut(s)	520
GsuI	CTGGAG	4 cut(s)	579, 1309, 2134, 2227
HaeII	RGCGCY	1 cut(s)	1630
HapII	CCGG	3 cut(s)	238, 1567, 2049
HgaI	GACGC	2 cut(s)	533, 1761
HhaI	GCGC	2 cut(s)	1629, 2163
Hin1I	GRCGYC	2 cut(s)	1594, 1753
Hin1II	CATG	6 cut(s)	578, 968, 1080, 1241, 1998, 2244
Hin6I	GCGC	2 cut(s)	1627, 2161
HinP1I	GCGC	2 cut(s)	1627, 2161
HincII	GTYRAC	1 cut(s)	832
HindII	GTYRAC	1 cut(s)	832
HpaII	CCGG	3 cut(s)	238, 1567, 2049
HphI	GGTGA	5 cut(s)	8, 347, 1991, 2128, 2190
Hpy166II	GTNNAC	2 cut(s)	832, 2020
Hpy188I	TCNGA	9 cut(s)	10, 31, 466, 840, 912, 1047, 1740, 1963, 2114
Hpy188III	TCNNGA	8 cut(s)	69, 797, 1181, 1598, 1891, 2003, 2041, 2151
Hpy8I	GTNNAC	2 cut(s)	832, 2020
Hpy99I	CGWCG	1 cut(s)	1599
HpyAV	CCTTC	8 cut(s)	119, 309, 450, 779, 872, 1641, 1745, 1958
HpyCH4III	ACNGT	4 cut(s)	594, 924, 1032, 1575
HpyCH4IV	ACGT	9 cut(s)	982, 1125, 1279, 1350, 1594, 1766, 1971, 2094, 2170
HpyF10VI	GCNNNNNNNGC	6 cut(s)	257, 414, 443, 791, 965, 1626
HpySE526I	ACGT	9 cut(s)	982, 1125, 1279, 1350, 1594, 1766, 1971, 2094, 2170
Hsp92I	GRCGYC	2 cut(s)	1594, 1753
Hsp92II	CATG	6 cut(s)	578, 968, 1080, 1241, 1998, 2244
HspAI	GCGC	2 cut(s)	1627, 2161
KpnI	GGTACC	1 cut(s)	1147
Kzo9I	GATC	8 cut(s)	371, 397, 475, 640, 912, 1133, 1270, 2037
LguI	GCTCTTC	1 cut(s)	1530
LmnI	GCTCC	4 cut(s)	256, 799, 956, 2180
Lsp1109I	GCAGC	7 cut(s)	55, 424, 891, 973, 1694, 2129, 2231
LweI	GCATC	5 cut(s)	92, 496, 744, 2072, 2216
MaeI	CTAG	5 cut(s)	804, 881, 1226, 1392, 1505
MaeII	ACGT	9 cut(s)	982, 1125, 1279, 1350, 1594, 1766, 1971, 2094, 2170
MaeIII	GTNAC	4 cut(s)	1306, 1387, 2134, 2196
MalI	GATC	8 cut(s)	373, 399, 477, 642, 914, 1135, 1272, 2039
MbiI	CCGCTC	2 cut(s)	198, 1669
MboI	GATC	8 cut(s)	371, 397, 475, 640, 912, 1133, 1270, 2037
MfeI	CAATTG	2 cut(s)	1203, 1675
MflI	RGATCY	2 cut(s)	371, 640
MhlI	GDGCHC	1 cut(s)	107
MlsI	TGGCCA	3 cut(s)	378, 1122, 1493
MluNI	TGGCCA	3 cut(s)	378, 1122, 1493
MlyI	GAGTC	7 cut(s)	20, 107, 175, 809, 1042, 1079, 2204
MmeI	TCCRAC	2 cut(s)	278, 1111
Mox20I	TGGCCA	3 cut(s)	378, 1122, 1493
Mph1103I	ATGCAT	2 cut(s)	2231, 2335
MroXI	GAANNNNTTC	2 cut(s)	294, 1734
MscI	TGGCCA	3 cut(s)	378, 1122, 1493
MseI	TTAA	7 cut(s)	161, 623, 950, 1167, 1319, 1773, 1835
MslI	CAYNNNNRTG	2 cut(s)	98, 1109
Msp20I	TGGCCA	3 cut(s)	378, 1122, 1493
MspA1I	CMGCKG	3 cut(s)	904, 2056, 2120
MspI	CCGG	3 cut(s)	238, 1567, 2049
MspR9I	CCNGG	4 cut(s)	558, 1012, 1439, 2049
MunI	CAATTG	2 cut(s)	1203, 1675
Mva1269I	GAATGC	2 cut(s)	2008, 2229
MvaI	CCWGG	3 cut(s)	558, 1012, 1439
MwoI	GCNNNNNNNGC	6 cut(s)	257, 414, 443, 791, 965, 1626
NciI	CCSGG	1 cut(s)	2049
NdeI	CATATG	1 cut(s)	121
NdeII	GATC	8 cut(s)	371, 397, 475, 640, 912, 1133, 1270, 2037
NlaIII	CATG	6 cut(s)	578, 968, 1080, 1241, 1998, 2244
NlaIV	GGNNCC	4 cut(s)	279, 795, 1145, 2182
NmuCI	GTSAC	3 cut(s)	1387, 2134, 2196
NsbI	TGCGCA	1 cut(s)	2162
NsiI	ATGCAT	2 cut(s)	2231, 2335
OliI	CACNNNNGTG	1 cut(s)	1109
PceI	AGGCCT	3 cut(s)	223, 1187, 2214
PciSI	GCTCTTC	1 cut(s)	1530
PcsI	WCGNNNNNNNCGW	2 cut(s)	1347, 2266
PctI	GAATGC	2 cut(s)	2008, 2229
PdmI	GAANNNNTTC	2 cut(s)	294, 1734
PfeI	GAWTC	5 cut(s)	1256, 1419, 1817, 2044, 2154
PflMI	CCANNNNNTGG	1 cut(s)	516
PfoI	TCCNGGA	2 cut(s)	556, 2047
PkrI	GCNGC	7 cut(s)	45, 439, 906, 988, 1684, 2119, 2221
PleI	GAGTC	7 cut(s)	20, 107, 174, 808, 1042, 1078, 2203
PmaCI	CACGTG	2 cut(s)	1280, 2171
PmlI	CACGTG	2 cut(s)	1280, 2171
PpsI	GAGTC	7 cut(s)	20, 107, 174, 808, 1042, 1078, 2203
Ppu21I	YACGTR	3 cut(s)	983, 1280, 2171
PsiI	TTATAA	2 cut(s)	1091, 2341
Psp124BI	GAGCTC	1 cut(s)	107
Psp1406I	AACGTT	1 cut(s)	2094
Psp6I	CCWGG	3 cut(s)	556, 1010, 1437
PspCI	CACGTG	2 cut(s)	1280, 2171
PspFI	CCCAGC	1 cut(s)	516
PspGI	CCWGG	3 cut(s)	556, 1010, 1437
PspN4I	GGNNCC	4 cut(s)	279, 795, 1145, 2182
PspPI	GGNCC	4 cut(s)	155, 200, 459, 702
PstI	CTGCAG	4 cut(s)	286, 991, 1327, 1557
PsuI	RGATCY	2 cut(s)	371, 640
PvuII	CAGCTG	1 cut(s)	2120
RsaI	GTAC	5 cut(s)	189, 1145, 1656, 1673, 1782
RsaNI	GTAC	5 cut(s)	188, 1144, 1655, 1672, 1781
RseI	CAYNNNNRTG	2 cut(s)	98, 1109
SacI	GAGCTC	1 cut(s)	107
SapI	GCTCTTC	1 cut(s)	1530
SaqAI	TTAA	7 cut(s)	161, 623, 950, 1167, 1319, 1773, 1835
SatI	GCNGC	7 cut(s)	44, 438, 905, 987, 1683, 2118, 2220
Sau3AI	GATC	8 cut(s)	371, 397, 475, 640, 912, 1133, 1270, 2037
Sau96I	GGNCC	4 cut(s)	155, 200, 459, 702
SbfI	CCTGCAGG	1 cut(s)	286
SchI	GAGTC	7 cut(s)	20, 107, 175, 809, 1042, 1079, 2204
ScrFI	CCNGG	4 cut(s)	558, 1012, 1439, 2049
SdaI	CCTGCAGG	1 cut(s)	286
SduI	GDGCHC	1 cut(s)	107
SfaNI	GCATC	5 cut(s)	92, 496, 744, 2072, 2216
SfcI	CTRYAG	6 cut(s)	282, 987, 1157, 1323, 1553, 2264
SinI	GGWCC	2 cut(s)	155, 200
SmiMI	CAYNNNNRTG	2 cut(s)	98, 1109
SmlI	CTYRAG	3 cut(s)	431, 441, 2003
SmoI	CTYRAG	3 cut(s)	431, 441, 2003
Sse8387I	CCTGCAGG	1 cut(s)	286
SseBI	AGGCCT	3 cut(s)	223, 1187, 2214
SsiI	CCGC	8 cut(s)	20, 198, 217, 272, 332, 902, 1669, 2056
SspMI	CTAG	5 cut(s)	804, 881, 1226, 1392, 1505
SstI	GAGCTC	1 cut(s)	107
StuI	AGGCCT	3 cut(s)	223, 1187, 2214
StyD4I	CCNGG	4 cut(s)	556, 1010, 1437, 2047
StyI	CCWWGG	2 cut(s)	942, 1504
TaaI	ACNGT	4 cut(s)	594, 924, 1032, 1575
TaiI	ACGT	9 cut(s)	985, 1128, 1282, 1353, 1597, 1769, 1974, 2097, 2173
TaqI	TCGA	4 cut(s)	54, 454, 1180, 1890
TfiI	GAWTC	5 cut(s)	1256, 1419, 1817, 2044, 2154
Tru1I	TTAA	7 cut(s)	161, 623, 950, 1167, 1319, 1773, 1835
Tru9I	TTAA	7 cut(s)	161, 623, 950, 1167, 1319, 1773, 1835
TscAI	CASTG	4 cut(s)	599, 745, 1616, 2146
TseFI	GTSAC	3 cut(s)	1387, 2134, 2196
TseI	GCWGC	7 cut(s)	43, 437, 904, 986, 1682, 2117, 2219
Tsp45I	GTSAC	3 cut(s)	1387, 2134, 2196
TspDTI	ATGAA	8 cut(s)	138, 372, 581, 736, 1051, 1716, 1759, 1818
TspGWI	ACGGA	4 cut(s)	633, 655, 1356, 1757
TspRI	CASTG	4 cut(s)	599, 745, 1616, 2146
Van91I	CCANNNNNTGG	1 cut(s)	516
VpaK11BI	GGWCC	2 cut(s)	155, 200
XapI	RAATTY	6 cut(s)	59, 581, 1084, 1344, 1785, 1950
XmaJI	CCTAGG	1 cut(s)	1504
XmnI	GAANNNNTTC	2 cut(s)	294, 1734
XspI	CTAG	5 cut(s)	804, 881, 1226, 1392, 1505
ZraI	GACGTC	1 cut(s)	1595
Zsp2I	ATGCAT	2 cut(s)	2231, 2335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.