Rroxscaffold_2G00088450

cyclic nucleotide-gated ion channel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000678
Physical Location & Seq
Reverse (-)
10373838 .. 10380663
6826 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00088450.1

Sequence Viewer

Length: 1842 bp
ATGGGTAAAATAAGAAACGATGAATTACCAATGCTATCTTCACAATTACCATCCAGTTACGAGAATACATTTAGTTCCATTCCTGTCAATTCAATGGAATCCAGTGGAACTGGAATTGGCCGTGTAGACCATACAGGTTCCTTACAGATTGATAGCAAAAATCCTTTCACACCTGCATGTGTTCCATTCCAGCAGTTTACAGATTGCAATGATCCTCACTGCACATTTTGCAAACCACGTCATAGTTTGAAATCAGTTCAACACAAAAACTACATAGCTTCAAGTTTGTTTGATCATAAGCTCCATAATATACTGTATGGTGATGCTAAAGGATGGTTTAAAAGAACTTGTTCTTTTCTGTATCCATATGTTCTCGGAGTTGTAAACCCTGATGCTAAAGCTGTACGAGGATGGAACAAGTTCTTTGTCATATCTTGCATGGTGGCAGTTTTTGTAGACCCGCTATTTTTCTTCTTGTTATCTGCACGAGAGATCATAATGTTGTCGGTTGTTCCTTTGGGATCGTTTCGAGCAAATCAAACCAAGAATCTTCTCCGCCTGGCAGTTTTTTTTCAATACTTTCCCAGGTTGTATAGGGTTCTGCCCTTGCTTGCTGGTCAATCTCCAAATGGCTTCTTCGTATTCGAGTCAGCTTGGACAAATTTTTTTATAAACACTCTCACTTTCTTGTTGGTTGGCCATGTTATTGGGTCATGCTGGTACCTCCTTGGCTTACAGAGGGTTAATCAGTGTCTTCGAGATGCCTGCCATAACTCTAATCTGCAGTCATGCGGGAGTTTAATAGATTGTTTCAATGCTCAATCTATTCCAGAGTCAACTAAATGGAGAGAAAATGAGAAGGCTGCTGGTTGTTTTAATCCGGAAGGAGATTTCTCCTATGGAATATATACTCCAGTTGTCAATCTCACTACAAGAGATAGCATGACTAAATATTTATACTCACTGTTTTGGGGATTCCAGAATTTTCTACAGTCTCTTGGACGGAGGAGGTTTGATATGTTATTGCGGAGTCGTGATGTTGAGCAGTGGATGAGTTATAGGAACTTACCAGAAGAGCTTAGAAGGCAAGTAAGAAATGCTGAACGGTATAATTGGTCTGCCACACAAGGTGTAAATGAAGAACTGATTCTGGAAAATTTGCCCGAACACCTTCAAAGAAATATAAGACGCCATCTCTTCGAATTTGTGAAGAAAGTTCGGATTTTTGCTCTGATGGACGATCCTATCTTAGATGCAATTTGTGAGAAACTAAAACAAAAAACATACATTGAAGGAAATGAAATTTTGTATCCTGGAGGTATGGTTGAGAATATGGTTTTTATTGTGCGTGGAAAGATGGAGAGCATTGGGGCGGATGGGACTGTTGATGACACATTAAAGGAAGGTGATGTTTGTGGTGAGGAACTTCTCAGATGGTGTCTTGAGGCTTCTGTAAACACTGATGGGAAAAATGTCAGGATCACTGGTCGGAGATTGCTCAGCAACAGATTGGTAAGGTGCTTAACTAACGTGGAAGCATTTCAACTCCGAGCTGCAGACCTCGAACAGTTCACTGCACGTTTTGCAAGATACTTGCGGAATCCACGTGTTCAAGGAGCCATAAGGTATGAATCTCCGTACTGGAGAGGGCTTGCAGCAAAGCGAATTCAAGTAGCTTGGAGGTACAGGCAAAAGCGTCTAAATCGCACAAGCCCACAGAGTTGCCCCCGAAACCCCTACTCCGATCAAAGTCCAGCGGACTTCTTGAGATCAACTTATCGCCCACATAGTTGGGGACTTGGAAATGATGCTCGGGAGAGGGAACACTGGGGCCTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

613

Amino Acids

70.81

Weight (kDa)

9.16

Isoelectric Point (pI)

50.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000678)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17700 AT3G17700
fragaria_vesca FvH4_5g18080 FvH4_5g18080 FvH4_5g18080 FvH4_6g44780
malus_domestica MD06G1236300.v1.1 MD09G1093300.v1.1 MD14G1243200.v1.1
prunus_persica Prupe.1G183800_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1
pyrus_communis pycom06g21110 pycom06g21140 pycom06g21190 pycom14g20450
rosa_chinensis RchiOBHm_Chr2g0161941 RchiOBHm_Chr4g0441651 RchiOBHm_Chr5g0083381 RchiOBHm_Chr6g0281101 RchiOBHm_Chr7g0177531
rosa_laevigata RLG00000005528 RLG00000015203 RLG00000015445 RLG00000021309 RLG00000023742 RLG00000034422 RLG00000036136
rosa_multiflora Rmu_co8432259.1_g000001 Rmu_co8481019.1_g000001 Rmu_sc0003410.1_g000009 Rmu_sc0004618.1_g000030 Rmu_sc0005144.1_g000007 Rmu_sc0008565.1_g000001 Rmu_sc0018381.1_g000003 Rmu_ssc0000330.1_g000004
rosa_roxburghii Rroxscaffold_1G00051700 Rroxscaffold_2G00088450 Rroxscaffold_2G00116130 Rroxscaffold_2G00126580 Rroxscaffold_3G00275780 Rroxscaffold_5G00338690 Rroxscaffold_5G00375080
rosa_rugosa Rorug02G0493400 Rorug04G0058900 Rorug04G0059000 Rorug06G0407100
rosa_samantha Rh2AG220400 Rh2AG282700 Rh2AG329100 Rh2AG559300 Rh2BG572700 Rh2CG542900 Rh2DG582500 Rh4AG135300 Rh4BG096100 Rh4DG026800 Rh4DG329100 Rh5CG271500 Rh6DG096900 Rh7AG006400 Rh7BG006300 Rh7CG006800 Rh7DG006400 Rh7DG278200
rosa_wichuraiana Rw0G014790 Rw1G017310 Rw7G000530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 671
AarI CACCTGC 1 cut(s) 181
Acc36I ACCTGC 1 cut(s) 181
Acc65I GGTACC 1 cut(s) 720
AccB1I GGYRCC 1 cut(s) 720
AccI GTMKAC 2 cut(s) 126, 456
AccIII TCCGGA 1 cut(s) 880
AciI CCGC 7 cut(s) 461, 556, 792, 1027, 1373, 1597, 1757
AclWI GGATC 4 cut(s) 206, 529, 1235, 1487
AcoI YGGCCR 2 cut(s) 118, 697
AcsI RAATTY 6 cut(s) 661, 982, 1156, 1202, 1302, 1665
AcvI CACGTG 1 cut(s) 1607
AcyI GRCGYC 1 cut(s) 1189
AdeI CACNNNGTG 1 cut(s) 1130
AfaI GTAC 4 cut(s) 405, 722, 1640, 1685
AflIII ACRYGT 1 cut(s) 1606
AjiI CACGTC 1 cut(s) 239
AjnI CCWGG 3 cut(s) 558, 584, 1312
AjuI GAANNNNNNNTTGG 2 cut(s) 22, 54
AluBI AGCT 7 cut(s) 278, 301, 401, 653, 1078, 1553, 1676
AluI AGCT 7 cut(s) 278, 301, 401, 653, 1078, 1553, 1676
Alw26I GTCTC 1 cut(s) 999
AlwI GGATC 4 cut(s) 206, 529, 1235, 1487
Ama87I CYCGRG 1 cut(s) 1812
Aor13HI TCCGGA 1 cut(s) 880
AoxI GGCC 3 cut(s) 118, 697, 1831
ApeKI GCWGC 3 cut(s) 863, 1553, 1655
ApoI RAATTY 6 cut(s) 661, 982, 1156, 1202, 1302, 1665
Asp700I GAANNNNTTC 5 cut(s) 349, 419, 1146, 1170, 1539
Asp718I GGTACC 1 cut(s) 720
AspS9I GGNCC 1 cut(s) 1831
AsuHPI GGTGA 3 cut(s) 332, 1418, 1430
AsuII TTCGAA 1 cut(s) 1200
AvaI CYCGRG 1 cut(s) 1812
BalI TGGCCA 1 cut(s) 699
BanI GGYRCC 1 cut(s) 720
BauI CACGAG 1 cut(s) 486
BbrPI CACGTG 1 cut(s) 1607
BbsI GAAGAC 1 cut(s) 746
BbvI GCAGC 3 cut(s) 850, 1540, 1667
BccI CCATC 9 cut(s) 58, 327, 405, 1200, 1228, 1351, 1370, 1428, 1457
BceAI ACGGC 1 cut(s) 105
BcgI CGANNNNNNTGC 2 cut(s) 747, 781
BciT130I CCWGG 3 cut(s) 560, 586, 1314
BciVI GTATCC 2 cut(s) 372, 1320
BclI TGATCA 1 cut(s) 292
BcoDI GTCTC 1 cut(s) 999
BfmI CTRYAG 3 cut(s) 782, 989, 1554
BfuAI ACCTGC 1 cut(s) 181
BfuI GTATCC 2 cut(s) 372, 1320
BisI GCNGC 3 cut(s) 864, 1554, 1656
BlpI GCTNAGC 1 cut(s) 1499
BlsI GCNGC 3 cut(s) 865, 1555, 1657
Bme1390I CCNGG 3 cut(s) 560, 586, 1314
BmeT110I CYCGRG 1 cut(s) 1812
BmgBI CACGTC 1 cut(s) 239
BmgT120I GGNCC 1 cut(s) 1831
BmiI GGNNCC 4 cut(s) 139, 722, 1618, 1832
BmrFI CCNGG 3 cut(s) 560, 586, 1314
BmrI ACTGGG 1 cut(s) 1837
BmsI GCATC 5 cut(s) 313, 382, 751, 1243, 1798
BmuI ACTGGG 1 cut(s) 1837
BpiI GAAGAC 1 cut(s) 746
BpmI CTGGAG 3 cut(s) 897, 1335, 1663
Bpu1102I GCTNAGC 1 cut(s) 1499
Bpu14I TTCGAA 1 cut(s) 1200
BpuEI CTTGAG 2 cut(s) 1463, 1786
BsaAI YACGTR 1 cut(s) 1607
BsaHI GRCGYC 1 cut(s) 1189
BsaJI CCNNGG 2 cut(s) 584, 727
BsaWI WCCGGW 1 cut(s) 880
BsaXI ACNNNNNCTCC 4 cut(s) 1308, 1338, 1724, 1754
Bse1I ACTGG 7 cut(s) 54, 102, 115, 914, 1489, 1646, 1832
Bse3DI GCAATG 1 cut(s) 214
BseAI TCCGGA 1 cut(s) 880
BseBI CCWGG 3 cut(s) 560, 586, 1314
BseDI CCNNGG 2 cut(s) 584, 727
BseGI GGATG 5 cut(s) 50, 338, 416, 1056, 1381
BseMI GCAATG 1 cut(s) 214
BseMII CTCAG 2 cut(s) 1444, 1513
BseNI ACTGG 7 cut(s) 54, 102, 115, 914, 1489, 1646, 1832
BseRI GAGGAG 1 cut(s) 1021
BseXI GCAGC 3 cut(s) 850, 1540, 1667
BsgI GTGCAG 3 cut(s) 205, 468, 1560
BshFI GGCC 3 cut(s) 120, 699, 1833
BshNI GGYRCC 1 cut(s) 720
BsiHKCI CYCGRG 1 cut(s) 1812
BsiSI CCGG 1 cut(s) 881
BslFI GGGAC 2 cut(s) 1393, 1809
BsmAI GTCTC 1 cut(s) 999
BsmFI GGGAC 2 cut(s) 1393, 1809
BsnI GGCC 3 cut(s) 120, 699, 1833
BsoBI CYCGRG 1 cut(s) 1812
Bsp119I TTCGAA 1 cut(s) 1200
Bsp13I TCCGGA 1 cut(s) 880
Bsp143I GATC 8 cut(s) 211, 292, 492, 521, 1240, 1479, 1744, 1769
Bsp1720I GCTNAGC 1 cut(s) 1499
BspACI CCGC 7 cut(s) 461, 556, 792, 1027, 1373, 1597, 1757
BspANI GGCC 3 cut(s) 120, 699, 1833
BspCNI CTCAG 2 cut(s) 1443, 1512
BspEI TCCGGA 1 cut(s) 880
BspLI GGNNCC 4 cut(s) 139, 722, 1618, 1832
BspMAI CTGCAG 2 cut(s) 786, 1558
BspMI ACCTGC 1 cut(s) 181
BspPI GGATC 4 cut(s) 206, 529, 1235, 1487
BspQI GCTCTTC 1 cut(s) 1068
BspT104I TTCGAA 1 cut(s) 1200
BspT107I GGYRCC 1 cut(s) 720
BsrDI GCAATG 1 cut(s) 214
BsrI ACTGG 7 cut(s) 54, 102, 115, 914, 1489, 1646, 1832
BssECI CCNNGG 2 cut(s) 584, 727
BssMI GATC 8 cut(s) 211, 292, 492, 521, 1240, 1479, 1744, 1769
BssNI GRCGYC 1 cut(s) 1189
BssSI CACGAG 1 cut(s) 486
BssT1I CCWWGG 1 cut(s) 727
Bst2BI CACGAG 1 cut(s) 486
Bst2UI CCWGG 3 cut(s) 560, 586, 1314
Bst4CI ACNGT 6 cut(s) 315, 966, 993, 1107, 1384, 1569
Bst6I CTCTTC 2 cut(s) 1068, 1202
BstACI GRCGYC 1 cut(s) 1189
BstAPI GCANNNNNTGC 2 cut(s) 228, 1583
BstBAI YACGTR 1 cut(s) 1607
BstBI TTCGAA 1 cut(s) 1200
BstC8I GCNNGC 3 cut(s) 612, 766, 1653
BstDEI CTNAG 4 cut(s) 1079, 1249, 1430, 1499
BstF5I GGATG 5 cut(s) 50, 338, 416, 1056, 1381
BstKTI GATC 8 cut(s) 214, 295, 495, 524, 1243, 1482, 1747, 1772
BstMAI GTCTC 1 cut(s) 999
BstMBI GATC 8 cut(s) 211, 292, 492, 521, 1240, 1479, 1744, 1769
BstMWI GCNNNNNNNGC 3 cut(s) 228, 1084, 1583
BstNI CCWGG 3 cut(s) 560, 586, 1314
BstNSI RCATGY 1 cut(s) 180
BstSCI CCNGG 3 cut(s) 558, 584, 1312
BstSFI CTRYAG 3 cut(s) 782, 989, 1554
BstV1I GCAGC 3 cut(s) 850, 1540, 1667
BstV2I GAAGAC 1 cut(s) 746
BstXI CCANNNNNNTGG 2 cut(s) 707, 1791
BsuI GTATCC 2 cut(s) 372, 1320
BsuRI GGCC 3 cut(s) 120, 699, 1833
BtrI CACGTC 1 cut(s) 239
BtsCI GGATG 5 cut(s) 50, 338, 416, 1056, 1381
BtsI GCAGTG 3 cut(s) 217, 1052, 1572
BtsIMutI CAGTG 9 cut(s) 109, 217, 755, 962, 1052, 1458, 1482, 1572, 1825
BveI ACCTGC 1 cut(s) 181
Cac8I GCNNGC 3 cut(s) 612, 766, 1653
Cfr13I GGNCC 1 cut(s) 1831
CseI GACGC 2 cut(s) 1197, 1685
Csp6I GTAC 4 cut(s) 404, 721, 1639, 1684
CviAII CATG 6 cut(s) 177, 439, 701, 714, 789, 943
CviQI GTAC 4 cut(s) 404, 721, 1639, 1684
DdeI CTNAG 4 cut(s) 1079, 1249, 1430, 1499
DpnI GATC 8 cut(s) 213, 294, 494, 523, 1242, 1481, 1746, 1771
DpnII GATC 8 cut(s) 211, 292, 492, 521, 1240, 1479, 1744, 1769
DraI TTTAAA 1 cut(s) 340
DraIII CACNNNGTG 1 cut(s) 1130
EaeI YGGCCR 2 cut(s) 118, 697
Eam1104I CTCTTC 2 cut(s) 1068, 1202
EarI CTCTTC 2 cut(s) 1068, 1202
EciI GGCGGA 2 cut(s) 545, 1388
Eco130I CCWWGG 1 cut(s) 727
Eco72I CACGTG 1 cut(s) 1607
Eco88I CYCGRG 1 cut(s) 1812
EcoO109I RGGNCCY 1 cut(s) 1831
EcoRI GAATTC 1 cut(s) 1665
EcoRII CCWGG 3 cut(s) 558, 584, 1312
EcoT14I CCWWGG 1 cut(s) 727
ErhI CCWWGG 1 cut(s) 727
FaeI CATG 6 cut(s) 180, 442, 704, 717, 792, 946
FaqI GGGAC 2 cut(s) 1393, 1809
FatI CATG 6 cut(s) 176, 438, 700, 713, 788, 942
FauI CCCGC 2 cut(s) 468, 785
FauNDI CATATG 1 cut(s) 367
FbaI TGATCA 1 cut(s) 292
FblI GTMKAC 2 cut(s) 126, 456
Fnu4HI GCNGC 3 cut(s) 864, 1554, 1656
FokI GGATG 5 cut(s) 37, 345, 423, 1063, 1388
Fsp4HI GCNGC 3 cut(s) 864, 1554, 1656
GluI GCNGC 3 cut(s) 864, 1554, 1656
GsuI CTGGAG 3 cut(s) 897, 1335, 1663
HaeIII GGCC 3 cut(s) 120, 699, 1833
HapII CCGG 1 cut(s) 881
HgaI GACGC 2 cut(s) 1197, 1685
Hin1I GRCGYC 1 cut(s) 1189
Hin1II CATG 6 cut(s) 180, 442, 704, 717, 792, 946
HincII GTYRAC 1 cut(s) 837
HindII GTYRAC 1 cut(s) 837
HinfI GANTC 9 cut(s) 98, 547, 647, 833, 975, 1030, 1147, 1600, 1631
HpaII CCGG 1 cut(s) 881
HphI GGTGA 3 cut(s) 332, 1418, 1430
Hpy166II GTNNAC 7 cut(s) 127, 198, 385, 457, 837, 1456, 1572
Hpy188I TCNGA 8 cut(s) 377, 1221, 1233, 1433, 1491, 1550, 1744, 1841
Hpy8I GTNNAC 7 cut(s) 127, 198, 385, 457, 837, 1456, 1572
HpyAV CCTTC 6 cut(s) 853, 878, 1077, 1181, 1286, 1397
HpyCH4III ACNGT 6 cut(s) 315, 966, 993, 1107, 1384, 1569
HpyCH4IV ACGT 4 cut(s) 238, 1530, 1579, 1606
HpyF10VI GCNNNNNNNGC 3 cut(s) 228, 1084, 1583
HpyF3I CTNAG 4 cut(s) 1079, 1249, 1430, 1499
HpySE526I ACGT 4 cut(s) 238, 1530, 1579, 1606
Hsp92I GRCGYC 1 cut(s) 1189
Hsp92II CATG 6 cut(s) 180, 442, 704, 717, 792, 946
Kpn2I TCCGGA 1 cut(s) 880
KpnI GGTACC 1 cut(s) 724
Ksp22I TGATCA 1 cut(s) 292
Kzo9I GATC 8 cut(s) 211, 292, 492, 521, 1240, 1479, 1744, 1769
LguI GCTCTTC 1 cut(s) 1068
LmnI GCTCC 2 cut(s) 306, 1616
Lsp1109I GCAGC 3 cut(s) 850, 1540, 1667
LweI GCATC 5 cut(s) 313, 382, 751, 1243, 1798
MaeII ACGT 4 cut(s) 238, 1530, 1579, 1606
MaeIII GTNAC 1 cut(s) 56
MalI GATC 8 cut(s) 213, 294, 494, 523, 1242, 1481, 1746, 1771
MboI GATC 8 cut(s) 211, 292, 492, 521, 1240, 1479, 1744, 1769
MboII GAAGA 9 cut(s) 30, 463, 542, 628, 746, 1085, 1151, 1189, 1222
MlsI TGGCCA 1 cut(s) 699
MluNI TGGCCA 1 cut(s) 699
MlyI GAGTC 3 cut(s) 656, 842, 1039
MmeI TCCRAC 1 cut(s) 1469
Mox20I TGGCCA 1 cut(s) 699
MroI TCCGGA 1 cut(s) 880
MroXI GAANNNNTTC 5 cut(s) 349, 419, 1146, 1170, 1539
MscI TGGCCA 1 cut(s) 699
MseI TTAA 6 cut(s) 339, 744, 800, 876, 1397, 1523
MslI CAYNNNNRTG 1 cut(s) 175
Msp20I TGGCCA 1 cut(s) 699
MspA1I CMGCKG 1 cut(s) 1757
MspI CCGG 1 cut(s) 881
MspR9I CCNGG 3 cut(s) 560, 586, 1314
MvaI CCWGG 3 cut(s) 560, 586, 1314
MwoI GCNNNNNNNGC 3 cut(s) 228, 1084, 1583
NdeI CATATG 1 cut(s) 367
NdeII GATC 8 cut(s) 211, 292, 492, 521, 1240, 1479, 1744, 1769
NlaIII CATG 6 cut(s) 180, 442, 704, 717, 792, 946
NlaIV GGNNCC 4 cut(s) 139, 722, 1618, 1832
NspI RCATGY 1 cut(s) 180
NspV TTCGAA 1 cut(s) 1200
PaqCI CACCTGC 1 cut(s) 181
PciSI GCTCTTC 1 cut(s) 1068
PdmI GAANNNNTTC 5 cut(s) 349, 419, 1146, 1170, 1539
PfeI GAWTC 6 cut(s) 98, 547, 975, 1147, 1600, 1631
PfoI TCCNGGA 1 cut(s) 1312
PkrI GCNGC 3 cut(s) 865, 1555, 1657
PleI GAGTC 3 cut(s) 655, 841, 1038
PmaCI CACGTG 1 cut(s) 1607
PmlI CACGTG 1 cut(s) 1607
PpsI GAGTC 3 cut(s) 655, 841, 1038
Ppu21I YACGTR 1 cut(s) 1607
PsiI TTATAA 1 cut(s) 671
Psp6I CCWGG 3 cut(s) 558, 584, 1312
PspCI CACGTG 1 cut(s) 1607
PspGI CCWGG 3 cut(s) 558, 584, 1312
PspN4I GGNNCC 4 cut(s) 139, 722, 1618, 1832
PspPI GGNCC 1 cut(s) 1831
PstI CTGCAG 2 cut(s) 786, 1558
RsaI GTAC 4 cut(s) 405, 722, 1640, 1685
RsaNI GTAC 4 cut(s) 404, 721, 1639, 1684
RseI CAYNNNNRTG 1 cut(s) 175
SapI GCTCTTC 1 cut(s) 1068
SaqAI TTAA 6 cut(s) 339, 744, 800, 876, 1397, 1523
SatI GCNGC 3 cut(s) 864, 1554, 1656
Sau3AI GATC 8 cut(s) 211, 292, 492, 521, 1240, 1479, 1744, 1769
Sau96I GGNCC 1 cut(s) 1831
SchI GAGTC 3 cut(s) 656, 842, 1039
ScrFI CCNGG 3 cut(s) 560, 586, 1314
SfaNI GCATC 5 cut(s) 313, 382, 751, 1243, 1798
SfcI CTRYAG 3 cut(s) 782, 989, 1554
SfuI TTCGAA 1 cut(s) 1200
SmiMI CAYNNNNRTG 1 cut(s) 175
SmlI CTYRAG 2 cut(s) 1442, 1765
SmoI CTYRAG 2 cut(s) 1442, 1765
SsiI CCGC 7 cut(s) 461, 556, 792, 1027, 1373, 1597, 1757
SspI AATATT 1 cut(s) 953
StyD4I CCNGG 3 cut(s) 558, 584, 1312
StyI CCWWGG 1 cut(s) 727
TaaI ACNGT 6 cut(s) 315, 966, 993, 1107, 1384, 1569
TaiI ACGT 4 cut(s) 241, 1533, 1582, 1609
TaqI TCGA 5 cut(s) 529, 645, 757, 1200, 1563
TfiI GAWTC 6 cut(s) 98, 547, 975, 1147, 1600, 1631
Tru1I TTAA 6 cut(s) 339, 744, 800, 876, 1397, 1523
Tru9I TTAA 6 cut(s) 339, 744, 800, 876, 1397, 1523
TscAI CASTG 9 cut(s) 109, 224, 755, 969, 1052, 1465, 1489, 1579, 1832
TseI GCWGC 3 cut(s) 863, 1553, 1655
TspDTI ATGAA 4 cut(s) 36, 1152, 1314, 1644
TspGWI ACGGA 2 cut(s) 1018, 1626
TspRI CASTG 9 cut(s) 109, 224, 755, 969, 1052, 1465, 1489, 1579, 1832
XapI RAATTY 6 cut(s) 661, 982, 1156, 1202, 1302, 1665
XceI RCATGY 1 cut(s) 180
XmiI GTMKAC 2 cut(s) 126, 456
XmnI GAANNNNTTC 5 cut(s) 349, 419, 1146, 1170, 1539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.