Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0000678

Physical Location & Seq

Genomic Coordinates Reverse (-)

448102 .. 455925

Gene Structure 7824 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G000530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGGCTGATTATGAAAGAGATGAGGTACCTATGCTTTCGGATACTCATCCACAGTCATCAAATGAGCACCTGCCATTACAAATTGAGAGATCTATGTCCAGGAAACGGAGCGCATCAATTTCGATTCCTATGAATTCTATGGATTCATATGAAAGGGGTGAAGTTAACCTTGTAGGCCATACTGGTCCCTTAAGAACTCACACAAAAACACCCTTCTTACCTATGAGTGGTCCGTTATATGCTAACCGCGGCAGGCCTGATAGTGTTCTGTGGCTAACTCGAGGTGTGACAGGGCAAGAAGCAGCAGAAACTACAGCAGAAAAGTTTCCTTCTACTAGTGCAACAAATGAGAATGAGTGGAATGACGACTATACTGCAAAAAACGAACACTTACTGAGATCTGGCCAATTGGGGATGTGCAATGATCCTTACTGCACAACTTGCCCAACTGTCTATAAGGCTACTCAACCAAAATACTCGAGGCCCTCGGGCAAGTTCCATAATGCTCTCTATGGGGATGCCAAGGGATGGGCCAGGAGGTTTTTCTCATGTCTGCGTCCATACATTCCTGGAGTTATGAACCCTCATGCTAAAATTGTGCAACAGTGGAATCAGTTTTTTGTCATTTCTTGCTTAGTAGCAATTTTTGTAGATCCATTGTTTTTCTTCCTGCTGTCTGTTCAAGAGGATAATAAATGTATAGTTATTGATCAGCCATGGACCACTACTTTTGTGGTTTTCAGAAGCATGACTGATCTCATATACTTCATGCACATTCTTCTCCAGTTTAGATTGGCTTATGTGGCTCCCGAGTCTAGAGTGGTTGGTGCTGGAGAGTTAGTTGACCATCCAAAGAAAATTGCTCTCAATTACCTTAAAGGATATTTTCTGATTGACTTTTTTGTTGTATTACCACTTCCTCAGATCATACTATTACTAGTTCTGCCAAAGAACTTGGGATCATCTGGAGCAAACTACGCAAAAAATCTTTTACGTGCTGCCGTTCTTCTTCAGTACATTCCCAGGTTGTGTAGGTTTCTACCTCTGCTTGCTGGACAGTCACCAAGTGGCTTCATATTTGAGTCAGCATGGGCCAATTTTATAATAAATCTTCTCACTTTTGTCTTATCTGGCCACATCGTTGGGTCATGCTGGTACCTCTTTGGATTACAGAGGGTTAATCAATGTTTTCGAGATGCCTGTCACAACTCTACGATTAATGGATGCATGAGGTTCATAGACTGTGGGCATGGAAGCGACAGTGAAAGTTCCAACGGGGATATGGAACTGCGTAATACCTGGAAAAACAATGTAAATGCTATTGCTTGTTTTAACCAAACTGGTTTTGACTACGGAATCTACGCCCAAGCTGTTGGCCTTACGACAGAAAATAGCATAATCACTAGATATGTATATGCATTGTTTTGGGGATTTCAGCAAATCAGTACTCTGGCTGGAAACCAAGTTCCAAGCTATTTTGTGTGGGAAGTCATTTTTACAATGGCCATTATTGGCCTAGGTCTCTTGCTTTTTGCTCTTCTCATAGGAAATATGCAGAACTTTCTGCAGGCACTTGGCCGGAGAAGGTTAGAAATGTCACTGAGACGTCGTGACGTTGAGCAGTGGATGAGGCATAGACGTTTGCCAGATGAATTAAGGAGGCGAGTACGACAAGCTGAAAGGTATAACTGGGCAGCTACCAGAGGAGTAAATGAAGAAATGCTTTTGGATGTCTTGCCTGAAGACCTTCAGACAGATATAAGACGCCATCTCTTCAAGTTTATTAAGAAAGTAAGGATTTTTGCCCTCATGGAGGAACCGATCTTAGATTCCATTTGCGGAAGACTAAGACAGAAGACATACATCCAAGGAAGCAAAGTTTTGTACTGTGGTGGTCTAATTGAAAAGATGGTCTTTATTGTGCGCGGAAAAATGGAGAGCATAGGAGAAGATGGGATTAGAGTTTCCTTATCCGAAGGGGATGTTTGTGGTGAGGAGCTTCTCTCATGGTGTCTCGAGCATTCTTCGGTAAATAAAGACGGTAAAAAGATCAGGATTCCTGGACAGCGAATGTTAAGCAACAGGAAGGTGATATGCTTAACAAATGTCGAAGCATTTTCACTAAGGGCAGCTGACATTGAAGAGGTCACCAGCCTCTTTGCCAGATTCTTGCGCAAACCACGTGTTCAAGGAGCCATAAGGTATGAGTCACCTTACTGGAGAGGCCTTGCGGCAAGATGCATTCAAGTGGCTTGGAGATACAGGAGAAAGCGCCTACATCGTGCAGATACTTCTCAATCCAATCATGCCTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009624 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans

Protein Analysis

771

Amino Acids

88.13

Weight (kDa)

9.18

Isoelectric Point (pI)

48.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	204 - 526	2.4e-18	Ion transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000678)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17700 AT3G17700
fragaria_vesca	FvH4_5g18080 FvH4_5g18080 FvH4_5g18080 FvH4_6g44780
malus_domestica	MD06G1236300.v1.1 MD09G1093300.v1.1 MD14G1243200.v1.1
prunus_persica	Prupe.1G183800_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1
pyrus_communis	pycom06g21110 pycom06g21140 pycom06g21190 pycom14g20450
rosa_chinensis	RchiOBHm_Chr2g0161941 RchiOBHm_Chr4g0441651 RchiOBHm_Chr5g0083381 RchiOBHm_Chr6g0281101 RchiOBHm_Chr7g0177531
rosa_laevigata	RLG00000005528 RLG00000015203 RLG00000015445 RLG00000021309 RLG00000023742 RLG00000034422 RLG00000036136
rosa_multiflora	Rmu_co8432259.1_g000001 Rmu_co8481019.1_g000001 Rmu_sc0003410.1_g000009 Rmu_sc0004618.1_g000030 Rmu_sc0005144.1_g000007 Rmu_sc0008565.1_g000001 Rmu_sc0018381.1_g000003 Rmu_ssc0000330.1_g000004
rosa_roxburghii	Rroxscaffold_1G00051700 Rroxscaffold_2G00088450 Rroxscaffold_2G00116130 Rroxscaffold_2G00126580 Rroxscaffold_3G00275780 Rroxscaffold_5G00338690 Rroxscaffold_5G00375080
rosa_rugosa	Rorug02G0493400 Rorug04G0058900 Rorug04G0059000 Rorug06G0407100
rosa_samantha	Rh2AG220400 Rh2AG282700 Rh2AG329100 Rh2AG559300 Rh2BG572700 Rh2CG542900 Rh2DG582500 Rh4AG135300 Rh4BG096100 Rh4DG026800 Rh4DG329100 Rh5CG271500 Rh6DG096900 Rh7AG006400 Rh7BG006300 Rh7CG006800 Rh7DG006400 Rh7DG278200
rosa_wichuraiana	Rw0G014790 Rw1G017310 Rw7G000530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1103
AarI	CACCTGC	1 cut(s)	78
AatII	GACGTC	1 cut(s)	1609
Acc16I	TGCGCA	1 cut(s)	2174
Acc36I	ACCTGC	1 cut(s)	78
Acc65I	GGTACC	2 cut(s)	25, 1155
AccB1I	GGYRCC	2 cut(s)	25, 1155
AccB7I	CCANNNNNTGG	1 cut(s)	528
AccII	CGCG	2 cut(s)	249, 1926
AciI	CCGC	5 cut(s)	247, 249, 1839, 1926, 2231
AclWI	GGATC	3 cut(s)	419, 647, 967
AcoI	YGGCCR	4 cut(s)	403, 1132, 1503, 1576
AcsI	RAATTY	1 cut(s)	133
AcuI	CTGAAG	3 cut(s)	995, 1733, 1761
AcvI	CACGTG	1 cut(s)	2183
AcyI	GRCGYC	2 cut(s)	1606, 1765
AdeI	CACNNNGTG	1 cut(s)	1067
AfaI	GTAC	6 cut(s)	27, 1016, 1157, 1447, 1668, 1886
AfiI	CCNNNNNNNGG	4 cut(s)	105, 227, 528, 1813
AflII	CTTAAG	1 cut(s)	190
AflIII	ACRYGT	1 cut(s)	2182
AgsI	TTSAA	6 cut(s)	683, 1777, 1904, 2141, 2189, 2246
AhlI	ACTAGT	2 cut(s)	335, 937
AjnI	CCWGG	6 cut(s)	98, 533, 568, 1022, 1298, 2059
AloI	GAACNNNNNNTCC	2 cut(s)	1449, 1481
AluBI	AGCT	6 cut(s)	1370, 1473, 1676, 1697, 1999, 2132
AluI	AGCT	6 cut(s)	1370, 1473, 1676, 1697, 1999, 2132
Alw21I	GWGCWC	1 cut(s)	69
Alw26I	GTCTC	3 cut(s)	1526, 1597, 2018
AlwI	GGATC	3 cut(s)	419, 647, 967
Ama87I	CYCGRG	5 cut(s)	279, 478, 487, 809, 2015
ApeKI	GCWGC	4 cut(s)	302, 998, 1694, 2129
ApoI	RAATTY	1 cut(s)	133
AseI	ATTAAT	1 cut(s)	1218
Asp700I	GAANNNNTTC	2 cut(s)	324, 1746
Asp718I	GGTACC	2 cut(s)	25, 1155
AspA2I	CCTAGG	1 cut(s)	1516
AspLEI	GCGC	4 cut(s)	113, 1926, 2175, 2274
AspS9I	GGNCC	6 cut(s)	185, 230, 483, 531, 720, 1092
AsuHPI	GGTGA	6 cut(s)	170, 1053, 2003, 2101, 2140, 2202
AvaI	CYCGRG	5 cut(s)	279, 478, 487, 809, 2015
AvaII	GGWCC	3 cut(s)	185, 230, 720
AvrII	CCTAGG	1 cut(s)	1516
BalI	TGGCCA	3 cut(s)	405, 1134, 1505
BanI	GGYRCC	2 cut(s)	25, 1155
BarI	GAAGNNNNNNTAC	2 cut(s)	900, 932
BbrPI	CACGTG	1 cut(s)	2183
BbsI	GAAGAC	3 cut(s)	1749, 1849, 1862
Bbv12I	GWGCWC	1 cut(s)	69
BbvI	GCAGC	4 cut(s)	314, 985, 1706, 2141
BccI	CCATC	5 cut(s)	522, 855, 1776, 1903, 1946
BceAI	ACGGC	1 cut(s)	986
BcgI	CGANNNNNNTGC	4 cut(s)	102, 136, 356, 390
BciT130I	CCWGG	6 cut(s)	100, 535, 570, 1024, 1300, 2061
BciVI	GTATCC	1 cut(s)	34
BclI	TGATCA	1 cut(s)	709
BcoDI	GTCTC	3 cut(s)	1526, 1597, 2018
BcuI	ACTAGT	2 cut(s)	335, 937
BfaI	CTAG	5 cut(s)	336, 816, 938, 1404, 1517
BfmI	CTRYAG	2 cut(s)	312, 1565
BfoI	RGCGCY	1 cut(s)	2275
BfrI	CTTAAG	1 cut(s)	190
BfuAI	ACCTGC	1 cut(s)	78
BfuI	GTATCC	1 cut(s)	34
BglII	AGATCT	2 cut(s)	89, 398
BisI	GCNGC	6 cut(s)	250, 303, 999, 1695, 2130, 2232
BlnI	CCTAGG	1 cut(s)	1516
BlsI	GCNGC	6 cut(s)	251, 304, 1000, 1696, 2131, 2233
BmcAI	AGTACT	1 cut(s)	1447
Bme1390I	CCNGG	6 cut(s)	100, 535, 570, 1024, 1300, 2061
Bme18I	GGWCC	3 cut(s)	185, 230, 720
BmeT110I	CYCGRG	5 cut(s)	279, 478, 487, 809, 2015
BmgT120I	GGNCC	6 cut(s)	185, 230, 483, 531, 720, 1092
BmiI	GGNNCC	6 cut(s)	27, 187, 807, 1157, 1818, 2194
BmrFI	CCNGG	6 cut(s)	100, 535, 570, 1024, 1300, 2061
BmrI	ACTGGG	1 cut(s)	1699
BmsI	GCATC	5 cut(s)	122, 508, 1186, 1214, 2228
BmuI	ACTGGG	1 cut(s)	1699
BpiI	GAAGAC	3 cut(s)	1749, 1849, 1862
BplI	GAGNNNNNCTC	2 cut(s)	1988, 2020
BpmI	CTGGAG	5 cut(s)	591, 767, 852, 987, 2239
BsaAI	YACGTR	2 cut(s)	995, 2183
BsaBI	GATNNNNATC	1 cut(s)	45
BsaHI	GRCGYC	2 cut(s)	1606, 1765
BsaI	GGTCTC	1 cut(s)	1526
BsaJI	CCNNGG	7 cut(s)	247, 486, 522, 716, 1022, 1516, 1867
BsaXI	ACNNNNNCTCC	2 cut(s)	825, 855
Bsc4I	CCNNNNNNNGG	4 cut(s)	105, 227, 528, 1813
Bse1I	ACTGG	5 cut(s)	187, 784, 1345, 1694, 2222
Bse3DI	GCAATG	1 cut(s)	427
Bse8I	GATNNNNATC	1 cut(s)	45
BseBI	CCWGG	6 cut(s)	100, 535, 570, 1024, 1300, 2061
BseDI	CCNNGG	7 cut(s)	247, 486, 522, 716, 1022, 1516, 1867
BseJI	GATNNNNATC	1 cut(s)	45
BseLI	CCNNNNNNNGG	4 cut(s)	105, 227, 528, 1813
BseMI	GCAATG	1 cut(s)	427
BseMII	CTCAG	3 cut(s)	386, 935, 1592
BseNI	ACTGG	5 cut(s)	187, 784, 1345, 1694, 2222
BseRI	GAGGAG	2 cut(s)	1719, 2009
BseXI	GCAGC	4 cut(s)	314, 985, 1706, 2141
BsgI	GTGCAG	2 cut(s)	418, 2304
Bsh1236I	CGCG	2 cut(s)	249, 1926
BshNI	GGYRCC	2 cut(s)	25, 1155
BsiHKAI	GWGCWC	1 cut(s)	69
BsiHKCI	CYCGRG	5 cut(s)	279, 478, 487, 809, 2015
BsiSI	CCGG	1 cut(s)	1579
BslFI	GGGAC	1 cut(s)	171
BslI	CCNNNNNNNGG	4 cut(s)	105, 227, 528, 1813
BsmAI	GTCTC	3 cut(s)	1526, 1597, 2018
BsmBI	CGTCTC	1 cut(s)	1597
BsmFI	GGGAC	1 cut(s)	171
BsmI	GAATGC	2 cut(s)	2020, 2241
Bso31I	GGTCTC	1 cut(s)	1526
BsoBI	CYCGRG	5 cut(s)	279, 478, 487, 809, 2015
Bsp1286I	GDGCHC	1 cut(s)	69
Bsp19I	CCATGG	1 cut(s)	716
BspACI	CCGC	5 cut(s)	247, 249, 1839, 1926, 2231
BspCNI	CTCAG	3 cut(s)	387, 934, 1593
BspFNI	CGCG	2 cut(s)	249, 1926
BspLI	GGNNCC	6 cut(s)	27, 187, 807, 1157, 1818, 2194
BspMAI	CTGCAG	1 cut(s)	1569
BspMI	ACCTGC	1 cut(s)	78
BspPI	GGATC	3 cut(s)	419, 647, 967
BspQI	GCTCTTC	1 cut(s)	1542
BspT107I	GGYRCC	2 cut(s)	25, 1155
BspTI	CTTAAG	1 cut(s)	190
BspTNI	GGTCTC	1 cut(s)	1526
BsrDI	GCAATG	1 cut(s)	427
BsrI	ACTGG	5 cut(s)	187, 784, 1345, 1694, 2222
BssECI	CCNNGG	7 cut(s)	247, 486, 522, 716, 1022, 1516, 1867
BssNI	GRCGYC	2 cut(s)	1606, 1765
BssT1I	CCWWGG	4 cut(s)	522, 716, 1516, 1867
Bst2UI	CCWGG	6 cut(s)	100, 535, 570, 1024, 1300, 2061
Bst4CI	ACNGT	8 cut(s)	54, 451, 606, 1059, 1244, 1262, 1889, 2042
Bst6I	CTCTTC	3 cut(s)	1542, 1778, 2136
BstACI	GRCGYC	2 cut(s)	1606, 1765
BstAFI	CTTAAG	1 cut(s)	190
BstAPI	GCANNNNNTGC	1 cut(s)	441
BstBAI	YACGTR	2 cut(s)	995, 2183
BstC8I	GCNNGC	3 cut(s)	254, 1050, 1569
BstDEI	CTNAG	7 cut(s)	395, 634, 921, 1601, 1825, 1847, 2123
BstDSI	CCRYGG	2 cut(s)	247, 716
BstEII	GGTNACC	1 cut(s)	2146
BstENI	CCTNNNNNAGG	1 cut(s)	1811
BstFNI	CGCG	2 cut(s)	249, 1926
BstH2I	RGCGCY	1 cut(s)	2275
BstHHI	GCGC	4 cut(s)	113, 1926, 2175, 2274
BstMAI	GTCTC	3 cut(s)	1526, 1597, 2018
BstMWI	GCNNNNNNNGC	3 cut(s)	441, 803, 977
BstNI	CCWGG	6 cut(s)	100, 535, 570, 1024, 1300, 2061
BstPI	GGTNACC	1 cut(s)	2146
BstSCI	CCNGG	6 cut(s)	98, 533, 568, 1022, 1298, 2059
BstSFI	CTRYAG	2 cut(s)	312, 1565
BstUI	CGCG	2 cut(s)	249, 1926
BstV1I	GCAGC	4 cut(s)	314, 985, 1706, 2141
BstV2I	GAAGAC	3 cut(s)	1749, 1849, 1862
BstX2I	RGATCY	3 cut(s)	89, 398, 652
BstXI	CCANNNNNNTGG	2 cut(s)	1142, 1373
BstYI	RGATCY	3 cut(s)	89, 398, 652
BsuI	GTATCC	1 cut(s)	34
BtgI	CCRYGG	2 cut(s)	247, 716
BtsI	GCAGTG	1 cut(s)	1628
BtsIMutI	CAGTG	4 cut(s)	611, 1267, 1598, 1628
BveI	ACCTGC	1 cut(s)	78
Cac8I	GCNNGC	3 cut(s)	254, 1050, 1569
CfoI	GCGC	4 cut(s)	113, 1926, 2175, 2274
Cfr13I	GGNCC	6 cut(s)	185, 230, 483, 531, 720, 1092
Cfr42I	CCGCGG	1 cut(s)	250
CseI	GACGC	2 cut(s)	545, 1773
Csp6I	GTAC	6 cut(s)	26, 1015, 1156, 1446, 1667, 1885
CspCI	CAANNNNNGTGG	2 cut(s)	712, 747
CviQI	GTAC	6 cut(s)	26, 1015, 1156, 1446, 1667, 1885
DdeI	CTNAG	7 cut(s)	395, 634, 921, 1601, 1825, 1847, 2123
DraIII	CACNNNGTG	1 cut(s)	1067
EaeI	YGGCCR	4 cut(s)	403, 1132, 1503, 1576
Eam1104I	CTCTTC	3 cut(s)	1542, 1778, 2136
EarI	CTCTTC	3 cut(s)	1542, 1778, 2136
Eco130I	CCWWGG	4 cut(s)	522, 716, 1516, 1867
Eco147I	AGGCCT	2 cut(s)	256, 2226
Eco31I	GGTCTC	1 cut(s)	1526
Eco47I	GGWCC	3 cut(s)	185, 230, 720
Eco57I	CTGAAG	3 cut(s)	995, 1733, 1761
Eco72I	CACGTG	1 cut(s)	2183
Eco88I	CYCGRG	5 cut(s)	279, 478, 487, 809, 2015
Eco91I	GGTNACC	1 cut(s)	2146
EcoNI	CCTNNNNNAGG	1 cut(s)	1811
EcoO109I	RGGNCCY	1 cut(s)	483
EcoO65I	GGTNACC	1 cut(s)	2146
EcoRI	GAATTC	1 cut(s)	133
EcoRII	CCWGG	6 cut(s)	98, 533, 568, 1022, 1298, 2059
EcoT14I	CCWWGG	4 cut(s)	522, 716, 1516, 1867
EcoT22I	ATGCAT	3 cut(s)	1229, 1420, 2243
ErhI	CCWWGG	4 cut(s)	522, 716, 1516, 1867
Esp3I	CGTCTC	1 cut(s)	1597
FalI	AAGNNNNNCTT	6 cut(s)	153, 185, 1707, 1739, 1898, 1930
FaqI	GGGAC	1 cut(s)	171
FauNDI	CATATG	1 cut(s)	148
FbaI	TGATCA	1 cut(s)	709
Fnu4HI	GCNGC	6 cut(s)	250, 303, 999, 1695, 2130, 2232
Fsp4HI	GCNGC	6 cut(s)	250, 303, 999, 1695, 2130, 2232
FspBI	CTAG	5 cut(s)	336, 816, 938, 1404, 1517
FspI	TGCGCA	1 cut(s)	2174
GlaI	GCGC	4 cut(s)	112, 1925, 2174, 2273
GluI	GCNGC	6 cut(s)	250, 303, 999, 1695, 2130, 2232
GsuI	CTGGAG	5 cut(s)	591, 767, 852, 987, 2239
HaeII	RGCGCY	1 cut(s)	2275
HapII	CCGG	1 cut(s)	1579
HgaI	GACGC	2 cut(s)	545, 1773
HhaI	GCGC	4 cut(s)	113, 1926, 2175, 2274
Hin1I	GRCGYC	2 cut(s)	1606, 1765
Hin6I	GCGC	4 cut(s)	111, 1924, 2173, 2272
HinP1I	GCGC	4 cut(s)	111, 1924, 2173, 2272
HincII	GTYRAC	2 cut(s)	166, 844
HindII	GTYRAC	2 cut(s)	166, 844
HpaI	GTTAAC	1 cut(s)	166
HpaII	CCGG	1 cut(s)	1579
HphI	GGTGA	6 cut(s)	170, 1053, 2003, 2101, 2140, 2202
Hpy166II	GTNNAC	2 cut(s)	166, 844
Hpy188I	TCNGA	6 cut(s)	40, 743, 891, 924, 1752, 1975
Hpy188III	TCNNGA	8 cut(s)	683, 809, 816, 966, 1193, 1610, 2015, 2053
Hpy8I	GTNNAC	2 cut(s)	166, 844
Hpy99I	CGWCG	1 cut(s)	1611
HpyAV	CCTTC	6 cut(s)	223, 339, 1578, 1757, 1970, 2080
HpyCH4III	ACNGT	8 cut(s)	54, 451, 606, 1059, 1244, 1262, 1889, 2042
HpyCH4IV	ACGT	5 cut(s)	994, 1606, 1614, 1639, 2182
HpyF10VI	GCNNNNNNNGC	3 cut(s)	441, 803, 977
HpyF3I	CTNAG	7 cut(s)	395, 634, 921, 1601, 1825, 1847, 2123
HpySE526I	ACGT	5 cut(s)	994, 1606, 1614, 1639, 2182
Hsp92I	GRCGYC	2 cut(s)	1606, 1765
HspAI	GCGC	4 cut(s)	111, 1924, 2173, 2272
KpnI	GGTACC	2 cut(s)	29, 1159
Ksp22I	TGATCA	1 cut(s)	709
KspAI	GTTAAC	1 cut(s)	166
KspI	CCGCGG	1 cut(s)	250
LguI	GCTCTTC	1 cut(s)	1542
LmnI	GCTCC	5 cut(s)	108, 811, 968, 1996, 2192
Lsp1109I	GCAGC	4 cut(s)	314, 985, 1706, 2141
LweI	GCATC	5 cut(s)	122, 508, 1186, 1214, 2228
MaeI	CTAG	5 cut(s)	336, 816, 938, 1404, 1517
MaeII	ACGT	5 cut(s)	994, 1606, 1614, 1639, 2182
MaeIII	GTNAC	7 cut(s)	286, 1059, 1202, 1596, 1610, 2146, 2208
MfeI	CAATTG	1 cut(s)	407
MflI	RGATCY	3 cut(s)	89, 398, 652
MhlI	GDGCHC	1 cut(s)	69
MlsI	TGGCCA	3 cut(s)	405, 1134, 1505
MluNI	TGGCCA	3 cut(s)	405, 1134, 1505
MlyI	GAGTC	3 cut(s)	821, 1091, 2216
MmeI	TCCRAC	1 cut(s)	1296
Mox20I	TGGCCA	3 cut(s)	405, 1134, 1505
Mph1103I	ATGCAT	3 cut(s)	1229, 1420, 2243
MroXI	GAANNNNTTC	2 cut(s)	324, 1746
MscI	TGGCCA	3 cut(s)	405, 1134, 1505
MslI	CAYNNNNRTG	1 cut(s)	2246
Msp20I	TGGCCA	3 cut(s)	405, 1134, 1505
MspA1I	CMGCKG	2 cut(s)	249, 2132
MspCI	CTTAAG	1 cut(s)	190
MspI	CCGG	1 cut(s)	1579
MspR9I	CCNGG	6 cut(s)	100, 535, 570, 1024, 1300, 2061
MunI	CAATTG	1 cut(s)	407
Mva1269I	GAATGC	2 cut(s)	2020, 2241
MvaI	CCWGG	6 cut(s)	100, 535, 570, 1024, 1300, 2061
MvnI	CGCG	2 cut(s)	249, 1926
MwoI	GCNNNNNNNGC	3 cut(s)	441, 803, 977
NcoI	CCATGG	1 cut(s)	716
NdeI	CATATG	1 cut(s)	148
NlaIV	GGNNCC	6 cut(s)	27, 187, 807, 1157, 1818, 2194
NmuCI	GTSAC	7 cut(s)	286, 1059, 1202, 1596, 1610, 2146, 2208
NsbI	TGCGCA	1 cut(s)	2174
NsiI	ATGCAT	3 cut(s)	1229, 1420, 2243
PaeR7I	CTCGAG	3 cut(s)	279, 478, 2015
PaqCI	CACCTGC	1 cut(s)	78
PceI	AGGCCT	2 cut(s)	256, 2226
PciSI	GCTCTTC	1 cut(s)	1542
PctI	GAATGC	2 cut(s)	2020, 2241
PdmI	GAANNNNTTC	2 cut(s)	324, 1746
PfeI	GAWTC	7 cut(s)	124, 143, 610, 1356, 1829, 2056, 2166
PflMI	CCANNNNNTGG	1 cut(s)	528
PfoI	TCCNGGA	3 cut(s)	98, 568, 2059
PkrI	GCNGC	6 cut(s)	251, 304, 1000, 1696, 2131, 2233
PleI	GAGTC	3 cut(s)	820, 1090, 2215
PmaCI	CACGTG	1 cut(s)	2183
PmlI	CACGTG	1 cut(s)	2183
PpsI	GAGTC	3 cut(s)	820, 1090, 2215
Ppu21I	YACGTR	2 cut(s)	995, 2183
PshBI	ATTAAT	1 cut(s)	1218
PsiI	TTATAA	1 cut(s)	1103
Psp6I	CCWGG	6 cut(s)	98, 533, 568, 1022, 1298, 2059
PspCI	CACGTG	1 cut(s)	2183
PspEI	GGTNACC	1 cut(s)	2146
PspGI	CCWGG	6 cut(s)	98, 533, 568, 1022, 1298, 2059
PspN4I	GGNNCC	6 cut(s)	27, 187, 807, 1157, 1818, 2194
PspPI	GGNCC	6 cut(s)	185, 230, 483, 531, 720, 1092
PspXI	VCTCGAGB	2 cut(s)	279, 478
PstI	CTGCAG	1 cut(s)	1569
PsuI	RGATCY	3 cut(s)	89, 398, 652
PvuII	CAGCTG	1 cut(s)	2132
RsaI	GTAC	6 cut(s)	27, 1016, 1157, 1447, 1668, 1886
RsaNI	GTAC	6 cut(s)	26, 1015, 1156, 1446, 1667, 1885
RseI	CAYNNNNRTG	1 cut(s)	2246
SacII	CCGCGG	1 cut(s)	250
SapI	GCTCTTC	1 cut(s)	1542
SatI	GCNGC	6 cut(s)	250, 303, 999, 1695, 2130, 2232
Sau96I	GGNCC	6 cut(s)	185, 230, 483, 531, 720, 1092
ScaI	AGTACT	1 cut(s)	1447
SchI	GAGTC	3 cut(s)	821, 1091, 2216
ScrFI	CCNGG	6 cut(s)	100, 535, 570, 1024, 1300, 2061
SduI	GDGCHC	1 cut(s)	69
SfaNI	GCATC	5 cut(s)	122, 508, 1186, 1214, 2228
SfcI	CTRYAG	2 cut(s)	312, 1565
Sfr274I	CTCGAG	3 cut(s)	279, 478, 2015
Sfr303I	CCGCGG	1 cut(s)	250
SgrBI	CCGCGG	1 cut(s)	250
SinI	GGWCC	3 cut(s)	185, 230, 720
SlaI	CTCGAG	3 cut(s)	279, 478, 2015
SmiMI	CAYNNNNRTG	1 cut(s)	2246
SmlI	CTYRAG	4 cut(s)	190, 279, 478, 2015
SmoI	CTYRAG	4 cut(s)	190, 279, 478, 2015
SpeI	ACTAGT	2 cut(s)	335, 937
SseBI	AGGCCT	2 cut(s)	256, 2226
SsiI	CCGC	5 cut(s)	247, 249, 1839, 1926, 2231
SspMI	CTAG	5 cut(s)	336, 816, 938, 1404, 1517
StuI	AGGCCT	2 cut(s)	256, 2226
StyD4I	CCNGG	6 cut(s)	98, 533, 568, 1022, 1298, 2059
StyI	CCWWGG	4 cut(s)	522, 716, 1516, 1867
TaaI	ACNGT	8 cut(s)	54, 451, 606, 1059, 1244, 1262, 1889, 2042
TaiI	ACGT	5 cut(s)	997, 1609, 1617, 1642, 2185
TaqI	TCGA	6 cut(s)	122, 280, 479, 1192, 2016, 2109
TatI	WGTACW	3 cut(s)	1014, 1445, 1884
TauI	GCSGC	2 cut(s)	252, 2234
TfiI	GAWTC	7 cut(s)	124, 143, 610, 1356, 1829, 2056, 2166
TscAI	CASTG	4 cut(s)	611, 1267, 1605, 1628
TseFI	GTSAC	7 cut(s)	286, 1059, 1202, 1596, 1610, 2146, 2208
TseI	GCWGC	4 cut(s)	302, 998, 1694, 2129
Tsp45I	GTSAC	7 cut(s)	286, 1059, 1202, 1596, 1610, 2146, 2208
TspGWI	ACGGA	3 cut(s)	121, 222, 1368
TspRI	CASTG	4 cut(s)	611, 1267, 1605, 1628
Van91I	CCANNNNNTGG	1 cut(s)	528
Vha464I	CTTAAG	1 cut(s)	190
VpaK11BI	GGWCC	3 cut(s)	185, 230, 720
VspI	ATTAAT	1 cut(s)	1218
XagI	CCTNNNNNAGG	1 cut(s)	1811
XapI	RAATTY	1 cut(s)	133
XbaI	TCTAGA	1 cut(s)	815
XcmI	CCANNNNNNNNNTGG	2 cut(s)	730, 1279
XhoI	CTCGAG	3 cut(s)	279, 478, 2015
XmaJI	CCTAGG	1 cut(s)	1516
XmnI	GAANNNNTTC	2 cut(s)	324, 1746
XspI	CTAG	5 cut(s)	336, 816, 938, 1404, 1517
ZraI	GACGTC	1 cut(s)	1607
ZrmI	AGTACT	1 cut(s)	1447
Zsp2I	ATGCAT	3 cut(s)	1229, 1420, 2243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.