Rh2AG559300

cyclic nucleotide-gated ion channel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000678
Physical Location & Seq
Forward (+)
79007703 .. 79018817
11115 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG559300.1

Sequence Viewer

Length: 2337 bp
ATGGCCAGGACCAGGAGCGCCAGGAAGGAGAAGAGCAGGAAGAGGCAGCAGCAGCAGCCTTTGAACGAAGCCGACGAGGACGAGGACCGATACGGCGTCATTGGGGGTTCAGCTTTGACTAGGCCTCCTAGAAGACAAATGGGTAAAATAAGAAACGATGAATTACCAATGCTACCTTCACAATTACCATCCAGTTACGAGAATACATTTAGTTCCATTCCTGTCAATTCAATGGAATCCAGTGGAACTGGAATTGGCCGTGTAGACCATACAGGTTCCTTACAGATTGATAGCAAAAATCCTTTCACACCTGCATGTGTTCCATTCCAGCAGTTTACAGATTGCAATGATCCTCACTGCACATTTTGCAAACCACGTCATAGTTTGAAATCAGTTCAACACAAAAACTACATAGCTTCAAGTTTGTTTGATCATAAGCTCCATAATATTCTGTATGGTGATGCTAAGGGATGGTTTAAAAGAACCTGTTCTTTTCTATATCCATATGTTCTCGGAGTTGTGAACCCTGATGCTAAAGCTGTACGAGGATGGAACAAGTTCTTTGTCATATCTTGCATGGTGGCAGTTTTTGTAGACCCGCTATTTTTCTTCTTGTTATCTGCACGAGAGGATTATAAGTGCATAACTATTAACTGGGCCATGACCATAATATTAGTGTTTTTCCGGACACTGACGGACTTCATTTACCTATTGCACATGCTTCTTCAGTTTAGGTTGGCTTACGTGGCTCCTGGGTCTAGAGTGGTTGGTACGGGAGAGATAGTAGACCAACCATATAAAATTGCTCTCAATTATCTCCATGGAAACTTTTTAGTCGACTTAATTATTGTTTTGCCGCTTCCTCAGATCATAATGTTGTCGATTGTTCCTTTGGGATCGTTTCGAGCAAATCAAACAAAGAATCTTCTCCGCCTGGCAGTATTTTTTCAATACTTTCCCAGGTTGTATAGGGTTCTGCCCCTGCTTGCTGGTCAATCTCCAAATGGATTCTTCGTATTCGAGTCAGCTTGGACAAATTTTTTTATAAACACTCTCACTTTCTTGTTGGTTGGCCATGTTATTGGGTCATGCTGGTACCTTCTTGGCTTACAGAGGGTTAACCAATGTCTTCGAGATGCCTGCCATAACTCTAATCTGCAGTCATGTGGGAATTTAATAGATTGTTGCAATGCTCAATCTATTCCAGAGTCAACTAGATGGAGAGAAAATGAGAAAGCTGCTGGTTGTTTTAATCCGGAAGGAGATTTCTCCTATGGAATATATACTCCAGTTGTCAGTCTCACTACAAGAGATAGCATGACTAAATATTTATACTCACTGTTTTGGGGATTCCAGCAAATCAGCACTTTGGCAGGAAATCAAACTCCAAGCTATTTTAATGGGGAAATTGTTTTTACCATGGTAATTATTGGACTGGGACTCTTCTTCTTTGCTCTTCTAATTGGAAATATGCAGAATTTTCTTCAGTCTCTTGGACGGAGGAGGTTTGATATGTTATTGCGGAGTCGTGATGTTGAGCAGTGGATGAGTTATAGGAACTTACCAGAAGAGCTTAGAAGGCAAGTAAGAAATGCTGAACGGTATAATTGGTCTGCCACACAAGGTGTAAATGAAGAACTGATTCTGGAAAATTTGCCCGAACACCTTCAAAGAAATATAAGACGCCATCTCTTCGAATTTGTGAAGAAAGTTCGGATTTTTGCTCTGATGGACGATCCTATCTTAGATGCAATATGTGAGAAACTAAAACAAAAAACATACATTGAAGGAAATGAAATTTTGTATCCTGGAGGTATGGTTGAGAATATGGTTTTTATTGTGCGTGGAAAGATGGAGAGCATTGGGGCGGATGGGACTGTTGATGACACATTAAAGGAAGGTGATGTTTGTGGTGAGGAACTTCTCAGATGGTGTCTTGAGGCTTCTGTAAACACTGATGGGAAAAATGTCAGGATCACTGGTCGGAGATTGCTCAGCAACAGATTGGTAAGGTGCTTAACTAACGTGGAAGCATTTCAACTCCGAGCTGCAGACCTCGAACAATTCACTGGACGTTTTGCAAGATACTTGCGGAATCCACGTGTACAAGGAGCCATAAGGTATGAATCTCCGTACTGGAGAGGGCTTGCAGCAAAGCGAATTCAAGTAGCTTGGAGGTACAGGCAAAAGCGTCTAAATCGCACAAGCCCACAGAGTTGCCCCCGAAACCCTTACTCCGATCAAAGTCCAGCGGACTTCTTGAGATCAACTTATCGCCCACATAGTTGGGGACTTGGAAATGATGCTCGGGAGCGGGAACACTGGGGCCTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

778

Amino Acids

89.6

Weight (kDa)

9.22

Isoelectric Point (pI)

46.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 186 - 501 5.5e-19 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000678)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17700 AT3G17700
fragaria_vesca FvH4_5g18080 FvH4_5g18080 FvH4_5g18080 FvH4_6g44780
malus_domestica MD06G1236300.v1.1 MD09G1093300.v1.1 MD14G1243200.v1.1
prunus_persica Prupe.1G183800_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1
pyrus_communis pycom06g21110 pycom06g21140 pycom06g21190 pycom14g20450
rosa_chinensis RchiOBHm_Chr2g0161941 RchiOBHm_Chr4g0441651 RchiOBHm_Chr5g0083381 RchiOBHm_Chr6g0281101 RchiOBHm_Chr7g0177531
rosa_laevigata RLG00000005528 RLG00000015203 RLG00000015445 RLG00000021309 RLG00000023742 RLG00000034422 RLG00000036136
rosa_multiflora Rmu_co8432259.1_g000001 Rmu_co8481019.1_g000001 Rmu_sc0003410.1_g000009 Rmu_sc0004618.1_g000030 Rmu_sc0005144.1_g000007 Rmu_sc0008565.1_g000001 Rmu_sc0018381.1_g000003 Rmu_ssc0000330.1_g000004
rosa_roxburghii Rroxscaffold_1G00051700 Rroxscaffold_2G00088450 Rroxscaffold_2G00116130 Rroxscaffold_2G00126580 Rroxscaffold_3G00275780 Rroxscaffold_5G00338690 Rroxscaffold_5G00375080
rosa_rugosa Rorug02G0493400 Rorug04G0058900 Rorug04G0059000 Rorug06G0407100
rosa_samantha Rh2AG220400 Rh2AG282700 Rh2AG329100 Rh2AG559300 Rh2BG572700 Rh2CG542900 Rh2DG582500 Rh4AG135300 Rh4BG096100 Rh4DG026800 Rh4DG329100 Rh5CG271500 Rh6DG096900 Rh7AG006400 Rh7BG006300 Rh7CG006800 Rh7DG006400 Rh7DG278200
rosa_wichuraiana Rw0G014790 Rw1G017310 Rw7G000530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 636, 1046
AarI CACCTGC 1 cut(s) 319
Acc36I ACCTGC 1 cut(s) 319
Acc65I GGTACC 1 cut(s) 1095
AccB1I GGYRCC 1 cut(s) 1095
AccBSI CCGCTC 1 cut(s) 2314
AccI GTMKAC 4 cut(s) 264, 594, 786, 837
AccIII TCCGGA 2 cut(s) 684, 1255
AciI CCGC 8 cut(s) 599, 857, 931, 1522, 1868, 2092, 2252, 2314
AclWI GGATC 4 cut(s) 344, 904, 1730, 1982
AcoI YGGCCR 3 cut(s) 3, 256, 1072
AcsI RAATTY 7 cut(s) 1036, 1171, 1477, 1651, 1697, 1797, 2160
AcuI CTGAAG 2 cut(s) 710, 1469
AcvI CACGTG 1 cut(s) 2102
AcyI GRCGYC 2 cut(s) 96, 1684
AdeI CACNNNGTG 1 cut(s) 1625
AfaI GTAC 6 cut(s) 543, 772, 1097, 2106, 2135, 2180
AfiI CCNNNNNNNGG 1 cut(s) 12
AflIII ACRYGT 1 cut(s) 2101
AjiI CACGTC 1 cut(s) 377
AjnI CCWGG 7 cut(s) 5, 11, 20, 751, 933, 959, 1807
AjuI GAANNNNNNNTTGG 2 cut(s) 160, 192
Alw26I GTCTC 2 cut(s) 1304, 1494
AlwI GGATC 4 cut(s) 344, 904, 1730, 1982
Ama87I CYCGRG 1 cut(s) 2307
Aor13HI TCCGGA 2 cut(s) 684, 1255
AoxI GGCC 6 cut(s) 3, 122, 256, 657, 1072, 2326
ApeKI GCWGC 7 cut(s) 46, 49, 52, 55, 1238, 2048, 2150
ApoI RAATTY 7 cut(s) 1036, 1171, 1477, 1651, 1697, 1797, 2160
Asp700I GAANNNNTTC 5 cut(s) 487, 557, 1641, 1665, 2034
Asp718I GGTACC 1 cut(s) 1095
AspLEI GCGC 1 cut(s) 20
AspS9I GGNCC 4 cut(s) 9, 85, 657, 2326
AsuHPI GGTGA 3 cut(s) 470, 1913, 1925
AsuII TTCGAA 1 cut(s) 1695
AvaI CYCGRG 1 cut(s) 2307
AvaII GGWCC 2 cut(s) 9, 85
BalI TGGCCA 2 cut(s) 5, 1074
BanI GGYRCC 1 cut(s) 1095
BauI CACGAG 1 cut(s) 624
BbrPI CACGTG 1 cut(s) 2102
BbsI GAAGAC 2 cut(s) 139, 1121
BbvI GCAGC 7 cut(s) 58, 61, 64, 67, 1225, 2035, 2162
BceAI ACGGC 2 cut(s) 109, 243
BcgI CGANNNNNNTGC 2 cut(s) 1122, 1156
BciT130I CCWGG 7 cut(s) 7, 13, 22, 753, 935, 961, 1809
BciVI GTATCC 1 cut(s) 1815
BclI TGATCA 1 cut(s) 430
BcoDI GTCTC 2 cut(s) 1304, 1494
BfaI CTAG 4 cut(s) 120, 129, 759, 1215
BfmI CTRYAG 2 cut(s) 1157, 2049
BfoI RGCGCY 1 cut(s) 21
BfuAI ACCTGC 1 cut(s) 319
BfuI GTATCC 1 cut(s) 1815
BisI GCNGC 8 cut(s) 47, 50, 53, 56, 857, 1239, 2049, 2151
BlpI GCTNAGC 1 cut(s) 1994
BlsI GCNGC 8 cut(s) 48, 51, 54, 57, 858, 1240, 2050, 2152
Bme1390I CCNGG 7 cut(s) 7, 13, 22, 753, 935, 961, 1809
Bme18I GGWCC 2 cut(s) 9, 85
BmeT110I CYCGRG 1 cut(s) 2307
BmgBI CACGTC 1 cut(s) 377
BmgT120I GGNCC 4 cut(s) 9, 85, 657, 2326
BmiI GGNNCC 5 cut(s) 277, 750, 1097, 2113, 2327
BmrFI CCNGG 7 cut(s) 7, 13, 22, 753, 935, 961, 1809
BmrI ACTGGG 3 cut(s) 664, 1445, 2332
BmsI GCATC 5 cut(s) 451, 520, 1126, 1738, 2293
BmuI ACTGGG 3 cut(s) 664, 1445, 2332
BpiI GAAGAC 2 cut(s) 139, 1121
BpmI CTGGAG 3 cut(s) 1272, 1830, 2158
Bpu10I CCTNAGC 1 cut(s) 465
Bpu1102I GCTNAGC 1 cut(s) 1994
Bpu14I TTCGAA 1 cut(s) 1695
BpuEI CTTGAG 2 cut(s) 1958, 2281
BsaAI YACGTR 2 cut(s) 745, 2102
BsaHI GRCGYC 2 cut(s) 96, 1684
BsaJI CCNNGG 4 cut(s) 752, 820, 959, 1419
BsaWI WCCGGW 2 cut(s) 684, 1255
BsaXI ACNNNNNCTCC 8 cut(s) 109, 139, 768, 798, 1803, 1833, 2219, 2249
Bsc4I CCNNNNNNNGG 1 cut(s) 12
Bse3DI GCAATG 2 cut(s) 352, 1195
BseAI TCCGGA 2 cut(s) 684, 1255
BseBI CCWGG 7 cut(s) 7, 13, 22, 753, 935, 961, 1809
BseDI CCNNGG 4 cut(s) 752, 820, 959, 1419
BseGI GGATG 5 cut(s) 188, 476, 554, 1551, 1876
BseLI CCNNNNNNNGG 1 cut(s) 12
BseMI GCAATG 2 cut(s) 352, 1195
BseMII CTCAG 3 cut(s) 878, 1939, 2008
BseRI GAGGAG 1 cut(s) 1516
BseXI GCAGC 7 cut(s) 58, 61, 64, 67, 1225, 2035, 2162
BsgI GTGCAG 2 cut(s) 343, 606
BshFI GGCC 6 cut(s) 5, 124, 258, 659, 1074, 2328
BshNI GGYRCC 1 cut(s) 1095
BsiHKCI CYCGRG 1 cut(s) 2307
BsiSI CCGG 2 cut(s) 685, 1256
BslFI GGGAC 3 cut(s) 1452, 1888, 2304
BslI CCNNNNNNNGG 1 cut(s) 12
BsmAI GTCTC 2 cut(s) 1304, 1494
BsmFI GGGAC 3 cut(s) 1452, 1888, 2304
BsnI GGCC 6 cut(s) 5, 124, 258, 659, 1074, 2328
BsoBI CYCGRG 1 cut(s) 2307
Bsp119I TTCGAA 1 cut(s) 1695
Bsp13I TCCGGA 2 cut(s) 684, 1255
Bsp1407I TGTACA 1 cut(s) 2104
Bsp143I GATC 8 cut(s) 349, 430, 867, 896, 1735, 1974, 2239, 2264
Bsp1720I GCTNAGC 1 cut(s) 1994
Bsp19I CCATGG 2 cut(s) 820, 1419
BspACI CCGC 8 cut(s) 599, 857, 931, 1522, 1868, 2092, 2252, 2314
BspANI GGCC 6 cut(s) 5, 124, 258, 659, 1074, 2328
BspCNI CTCAG 3 cut(s) 877, 1938, 2007
BspEI TCCGGA 2 cut(s) 684, 1255
BspLI GGNNCC 5 cut(s) 277, 750, 1097, 2113, 2327
BspMAI CTGCAG 2 cut(s) 1161, 2053
BspMI ACCTGC 1 cut(s) 319
BspPI GGATC 4 cut(s) 344, 904, 1730, 1982
BspQI GCTCTTC 3 cut(s) 26, 1461, 1563
BspT104I TTCGAA 1 cut(s) 1695
BspT107I GGYRCC 1 cut(s) 1095
BsrBI CCGCTC 1 cut(s) 2314
BsrDI GCAATG 2 cut(s) 352, 1195
BsrGI TGTACA 1 cut(s) 2104
BssECI CCNNGG 4 cut(s) 752, 820, 959, 1419
BssMI GATC 8 cut(s) 349, 430, 867, 896, 1735, 1974, 2239, 2264
BssNI GRCGYC 2 cut(s) 96, 1684
BssSI CACGAG 1 cut(s) 624
BssT1I CCWWGG 2 cut(s) 820, 1419
Bst2BI CACGAG 1 cut(s) 624
Bst2UI CCWGG 7 cut(s) 7, 13, 22, 753, 935, 961, 1809
Bst4CI ACNGT 3 cut(s) 1341, 1602, 1879
Bst6I CTCTTC 6 cut(s) 26, 35, 1448, 1461, 1563, 1697
BstACI GRCGYC 2 cut(s) 96, 1684
BstAPI GCANNNNNTGC 1 cut(s) 366
BstAUI TGTACA 1 cut(s) 2104
BstBAI YACGTR 2 cut(s) 745, 2102
BstBI TTCGAA 1 cut(s) 1695
BstC8I GCNNGC 3 cut(s) 987, 1141, 2148
BstDEI CTNAG 6 cut(s) 465, 864, 1574, 1744, 1925, 1994
BstDSI CCRYGG 2 cut(s) 820, 1419
BstF5I GGATG 5 cut(s) 188, 476, 554, 1551, 1876
BstH2I RGCGCY 1 cut(s) 21
BstHHI GCGC 1 cut(s) 20
BstKTI GATC 8 cut(s) 352, 433, 870, 899, 1738, 1977, 2242, 2267
BstMAI GTCTC 2 cut(s) 1304, 1494
BstMBI GATC 8 cut(s) 349, 430, 867, 896, 1735, 1974, 2239, 2264
BstMWI GCNNNNNNNGC 5 cut(s) 52, 55, 366, 746, 1579
BstNI CCWGG 7 cut(s) 7, 13, 22, 753, 935, 961, 1809
BstNSI RCATGY 2 cut(s) 318, 721
BstSCI CCNGG 7 cut(s) 5, 11, 20, 751, 933, 959, 1807
BstSFI CTRYAG 2 cut(s) 1157, 2049
BstV1I GCAGC 7 cut(s) 58, 61, 64, 67, 1225, 2035, 2162
BstV2I GAAGAC 2 cut(s) 139, 1121
BstXI CCANNNNNNTGG 2 cut(s) 1082, 2286
BsuI GTATCC 1 cut(s) 1815
BsuRI GGCC 6 cut(s) 5, 124, 258, 659, 1074, 2328
BtgI CCRYGG 2 cut(s) 820, 1419
BtrI CACGTC 1 cut(s) 377
BtsCI GGATG 5 cut(s) 188, 476, 554, 1551, 1876
BtsI GCAGTG 2 cut(s) 355, 1547
BtsIMutI CAGTG 9 cut(s) 247, 355, 689, 1337, 1547, 1953, 1977, 2067, 2320
BveI ACCTGC 1 cut(s) 319
Cac8I GCNNGC 3 cut(s) 987, 1141, 2148
CfoI GCGC 1 cut(s) 20
Cfr13I GGNCC 4 cut(s) 9, 85, 657, 2326
CseI GACGC 3 cut(s) 85, 1692, 2180
Csp6I GTAC 6 cut(s) 542, 771, 1096, 2105, 2134, 2179
CviQI GTAC 6 cut(s) 542, 771, 1096, 2105, 2134, 2179
DdeI CTNAG 6 cut(s) 465, 864, 1574, 1744, 1925, 1994
DpnI GATC 8 cut(s) 351, 432, 869, 898, 1737, 1976, 2241, 2266
DpnII GATC 8 cut(s) 349, 430, 867, 896, 1735, 1974, 2239, 2264
DraI TTTAAA 1 cut(s) 478
DraIII CACNNNGTG 1 cut(s) 1625
EaeI YGGCCR 3 cut(s) 3, 256, 1072
Eam1104I CTCTTC 6 cut(s) 26, 35, 1448, 1461, 1563, 1697
EarI CTCTTC 6 cut(s) 26, 35, 1448, 1461, 1563, 1697
EciI GGCGGA 2 cut(s) 920, 1883
Eco130I CCWWGG 2 cut(s) 820, 1419
Eco147I AGGCCT 1 cut(s) 124
Eco47I GGWCC 2 cut(s) 9, 85
Eco57I CTGAAG 2 cut(s) 710, 1469
Eco72I CACGTG 1 cut(s) 2102
Eco88I CYCGRG 1 cut(s) 2307
EcoO109I RGGNCCY 1 cut(s) 2326
EcoRI GAATTC 1 cut(s) 2160
EcoRII CCWGG 7 cut(s) 5, 11, 20, 751, 933, 959, 1807
EcoT14I CCWWGG 2 cut(s) 820, 1419
ErhI CCWWGG 2 cut(s) 820, 1419
FaqI GGGAC 3 cut(s) 1452, 1888, 2304
FauI CCCGC 2 cut(s) 606, 2307
FauNDI CATATG 1 cut(s) 505
FbaI TGATCA 1 cut(s) 430
FblI GTMKAC 4 cut(s) 264, 594, 786, 837
Fnu4HI GCNGC 8 cut(s) 47, 50, 53, 56, 857, 1239, 2049, 2151
FokI GGATG 5 cut(s) 175, 483, 561, 1558, 1883
Fsp4HI GCNGC 8 cut(s) 47, 50, 53, 56, 857, 1239, 2049, 2151
FspBI CTAG 4 cut(s) 120, 129, 759, 1215
GlaI GCGC 1 cut(s) 19
GluI GCNGC 8 cut(s) 47, 50, 53, 56, 857, 1239, 2049, 2151
GsuI CTGGAG 3 cut(s) 1272, 1830, 2158
HaeII RGCGCY 1 cut(s) 21
HaeIII GGCC 6 cut(s) 5, 124, 258, 659, 1074, 2328
HapII CCGG 2 cut(s) 685, 1256
HgaI GACGC 3 cut(s) 85, 1692, 2180
HhaI GCGC 1 cut(s) 20
Hin1I GRCGYC 2 cut(s) 96, 1684
Hin6I GCGC 1 cut(s) 18
HinP1I GCGC 1 cut(s) 18
HincII GTYRAC 3 cut(s) 838, 1120, 1212
HindII GTYRAC 3 cut(s) 838, 1120, 1212
HpaI GTTAAC 1 cut(s) 1120
HpaII CCGG 2 cut(s) 685, 1256
HphI GGTGA 3 cut(s) 470, 1913, 1925
Hpy188I TCNGA 9 cut(s) 515, 867, 1716, 1728, 1928, 1986, 2045, 2239, 2336
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 8 cut(s) 19, 186, 1109, 1253, 1572, 1676, 1781, 1892
HpyCH4III ACNGT 3 cut(s) 1341, 1602, 1879
HpyCH4IV ACGT 5 cut(s) 376, 744, 2025, 2074, 2101
HpyF10VI GCNNNNNNNGC 5 cut(s) 52, 55, 366, 746, 1579
HpyF3I CTNAG 6 cut(s) 465, 864, 1574, 1744, 1925, 1994
HpySE526I ACGT 5 cut(s) 376, 744, 2025, 2074, 2101
Hsp92I GRCGYC 2 cut(s) 96, 1684
HspAI GCGC 1 cut(s) 18
Kpn2I TCCGGA 2 cut(s) 684, 1255
KpnI GGTACC 1 cut(s) 1099
Ksp22I TGATCA 1 cut(s) 430
KspAI GTTAAC 1 cut(s) 1120
Kzo9I GATC 8 cut(s) 349, 430, 867, 896, 1735, 1974, 2239, 2264
LguI GCTCTTC 3 cut(s) 26, 1461, 1563
LmnI GCTCC 5 cut(s) 15, 444, 754, 2111, 2311
Lsp1109I GCAGC 7 cut(s) 58, 61, 64, 67, 1225, 2035, 2162
LweI GCATC 5 cut(s) 451, 520, 1126, 1738, 2293
MaeI CTAG 4 cut(s) 120, 129, 759, 1215
MaeII ACGT 5 cut(s) 376, 744, 2025, 2074, 2101
MaeIII GTNAC 1 cut(s) 194
MalI GATC 8 cut(s) 351, 432, 869, 898, 1737, 1976, 2241, 2266
MbiI CCGCTC 1 cut(s) 2314
MboI GATC 8 cut(s) 349, 430, 867, 896, 1735, 1974, 2239, 2264
MlsI TGGCCA 2 cut(s) 5, 1074
MluNI TGGCCA 2 cut(s) 5, 1074
MlyI GAGTC 4 cut(s) 1031, 1217, 1434, 1534
MmeI TCCRAC 1 cut(s) 1964
Mox20I TGGCCA 2 cut(s) 5, 1074
MroI TCCGGA 2 cut(s) 684, 1255
MroXI GAANNNNTTC 5 cut(s) 487, 557, 1641, 1665, 2034
MscI TGGCCA 2 cut(s) 5, 1074
MseI TTAA 9 cut(s) 477, 651, 842, 1119, 1175, 1251, 1398, 1892, 2018
MslI CAYNNNNRTG 1 cut(s) 313
Msp20I TGGCCA 2 cut(s) 5, 1074
MspA1I CMGCKG 1 cut(s) 2252
MspI CCGG 2 cut(s) 685, 1256
MspR9I CCNGG 7 cut(s) 7, 13, 22, 753, 935, 961, 1809
MvaI CCWGG 7 cut(s) 7, 13, 22, 753, 935, 961, 1809
MwoI GCNNNNNNNGC 5 cut(s) 52, 55, 366, 746, 1579
NcoI CCATGG 2 cut(s) 820, 1419
NdeI CATATG 1 cut(s) 505
NdeII GATC 8 cut(s) 349, 430, 867, 896, 1735, 1974, 2239, 2264
NlaIV GGNNCC 5 cut(s) 277, 750, 1097, 2113, 2327
NspI RCATGY 2 cut(s) 318, 721
NspV TTCGAA 1 cut(s) 1695
PaqCI CACCTGC 1 cut(s) 319
PceI AGGCCT 1 cut(s) 124
PciSI GCTCTTC 3 cut(s) 26, 1461, 1563
PcsI WCGNNNNNNNCGW 1 cut(s) 72
PdmI GAANNNNTTC 5 cut(s) 487, 557, 1641, 1665, 2034
PfeI GAWTC 7 cut(s) 236, 922, 1008, 1350, 1642, 2095, 2126
PfoI TCCNGGA 1 cut(s) 1807
PkrI GCNGC 8 cut(s) 48, 51, 54, 57, 858, 1240, 2050, 2152
PleI GAGTC 4 cut(s) 1030, 1216, 1434, 1533
PmaCI CACGTG 1 cut(s) 2102
PmlI CACGTG 1 cut(s) 2102
PpsI GAGTC 4 cut(s) 1030, 1216, 1434, 1533
Ppu21I YACGTR 2 cut(s) 745, 2102
PsiI TTATAA 2 cut(s) 636, 1046
Psp6I CCWGG 7 cut(s) 5, 11, 20, 751, 933, 959, 1807
PspCI CACGTG 1 cut(s) 2102
PspGI CCWGG 7 cut(s) 5, 11, 20, 751, 933, 959, 1807
PspN4I GGNNCC 5 cut(s) 277, 750, 1097, 2113, 2327
PspPI GGNCC 4 cut(s) 9, 85, 657, 2326
PstI CTGCAG 2 cut(s) 1161, 2053
RsaI GTAC 6 cut(s) 543, 772, 1097, 2106, 2135, 2180
RsaNI GTAC 6 cut(s) 542, 771, 1096, 2105, 2134, 2179
RseI CAYNNNNRTG 1 cut(s) 313
SalI GTCGAC 1 cut(s) 836
SapI GCTCTTC 3 cut(s) 26, 1461, 1563
SaqAI TTAA 9 cut(s) 477, 651, 842, 1119, 1175, 1251, 1398, 1892, 2018
SatI GCNGC 8 cut(s) 47, 50, 53, 56, 857, 1239, 2049, 2151
Sau3AI GATC 8 cut(s) 349, 430, 867, 896, 1735, 1974, 2239, 2264
Sau96I GGNCC 4 cut(s) 9, 85, 657, 2326
SchI GAGTC 4 cut(s) 1031, 1217, 1434, 1534
ScrFI CCNGG 7 cut(s) 7, 13, 22, 753, 935, 961, 1809
SfaNI GCATC 5 cut(s) 451, 520, 1126, 1738, 2293
SfcI CTRYAG 2 cut(s) 1157, 2049
SfuI TTCGAA 1 cut(s) 1695
SinI GGWCC 2 cut(s) 9, 85
SmiMI CAYNNNNRTG 1 cut(s) 313
SmlI CTYRAG 2 cut(s) 1937, 2260
SmoI CTYRAG 2 cut(s) 1937, 2260
SseBI AGGCCT 1 cut(s) 124
SsiI CCGC 8 cut(s) 599, 857, 931, 1522, 1868, 2092, 2252, 2314
SspI AATATT 3 cut(s) 448, 672, 1328
SspMI CTAG 4 cut(s) 120, 129, 759, 1215
StuI AGGCCT 1 cut(s) 124
StyD4I CCNGG 7 cut(s) 5, 11, 20, 751, 933, 959, 1807
StyI CCWWGG 2 cut(s) 820, 1419
TaaI ACNGT 3 cut(s) 1341, 1602, 1879
TaiI ACGT 5 cut(s) 379, 747, 2028, 2077, 2104
TaqI TCGA 7 cut(s) 837, 881, 904, 1020, 1132, 1695, 2058
TaqII GACCGA 1 cut(s) 102
TatI WGTACW 1 cut(s) 2104
TauI GCSGC 1 cut(s) 859
TfiI GAWTC 7 cut(s) 236, 922, 1008, 1350, 1642, 2095, 2126
Tru1I TTAA 9 cut(s) 477, 651, 842, 1119, 1175, 1251, 1398, 1892, 2018
Tru9I TTAA 9 cut(s) 477, 651, 842, 1119, 1175, 1251, 1398, 1892, 2018
TscAI CASTG 9 cut(s) 247, 362, 696, 1344, 1547, 1960, 1984, 2074, 2327
TseI GCWGC 7 cut(s) 46, 49, 52, 55, 1238, 2048, 2150
TspDTI ATGAA 5 cut(s) 174, 691, 1647, 1809, 2139
TspGWI ACGGA 3 cut(s) 710, 1513, 2121
TspRI CASTG 9 cut(s) 247, 362, 696, 1344, 1547, 1960, 1984, 2074, 2327
VpaK11BI GGWCC 2 cut(s) 9, 85
XapI RAATTY 7 cut(s) 1036, 1171, 1477, 1651, 1697, 1797, 2160
XbaI TCTAGA 1 cut(s) 758
XceI RCATGY 2 cut(s) 318, 721
XmiI GTMKAC 4 cut(s) 264, 594, 786, 837
XmnI GAANNNNTTC 5 cut(s) 487, 557, 1641, 1665, 2034
XspI CTAG 4 cut(s) 120, 129, 759, 1215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.