PHD-finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 65 |
| AatII | GACGTC | 1 cut(s) | 69 |
| AciI | CCGC | 2 cut(s) | 49, 141 |
| AcyI | GRCGYC | 1 cut(s) | 66 |
| AgsI | TTSAA | 1 cut(s) | 27 |
| Alw26I | GTCTC | 1 cut(s) | 98 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 1 cut(s) | 36 |
| AspS9I | GGNCC | 1 cut(s) | 112 |
| AsuHPI | GGTGA | 1 cut(s) | 148 |
| AvaII | GGWCC | 1 cut(s) | 112 |
| BbvI | GCAGC | 1 cut(s) | 48 |
| BccI | CCATC | 1 cut(s) | 161 |
| BcoDI | GTCTC | 1 cut(s) | 98 |
| BfaI | CTAG | 1 cut(s) | 108 |
| BisI | GCNGC | 1 cut(s) | 37 |
| BlsI | GCNGC | 1 cut(s) | 38 |
| Bme18I | GGWCC | 1 cut(s) | 112 |
| BmgT120I | GGNCC | 1 cut(s) | 112 |
| BmiI | GGNNCC | 1 cut(s) | 113 |
| BsaHI | GRCGYC | 1 cut(s) | 66 |
| BseXI | GCAGC | 1 cut(s) | 48 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsiSI | CCGG | 1 cut(s) | 86 |
| BslFI | GGGAC | 1 cut(s) | 125 |
| BsmAI | GTCTC | 1 cut(s) | 98 |
| BsmFI | GGGAC | 1 cut(s) | 125 |
| BsnI | GGCC | 1 cut(s) | 5 |
| BspACI | CCGC | 2 cut(s) | 49, 141 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspLI | GGNNCC | 1 cut(s) | 113 |
| BssNI | GRCGYC | 1 cut(s) | 66 |
| Bst6I | CTCTTC | 2 cut(s) | 89, 176 |
| BstACI | GRCGYC | 1 cut(s) | 66 |
| BstMAI | GTCTC | 1 cut(s) | 98 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 149 |
| BstV1I | GCAGC | 1 cut(s) | 48 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| Cfr13I | GGNCC | 1 cut(s) | 112 |
| CviJI | RGCY | 2 cut(s) | 5, 118 |
| CviKI_1 | RGCY | 2 cut(s) | 5, 118 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 65 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 65 |
| Eam1104I | CTCTTC | 2 cut(s) | 89, 176 |
| EarI | CTCTTC | 2 cut(s) | 89, 176 |
| Eco47I | GGWCC | 1 cut(s) | 112 |
| FaiI | YATR | 1 cut(s) | 34 |
| FaqI | GGGAC | 1 cut(s) | 125 |
| FauI | CCCGC | 1 cut(s) | 148 |
| Fnu4HI | GCNGC | 1 cut(s) | 37 |
| Fsp4HI | GCNGC | 1 cut(s) | 37 |
| FspBI | CTAG | 1 cut(s) | 108 |
| GluI | GCNGC | 1 cut(s) | 37 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 1 cut(s) | 86 |
| Hin1I | GRCGYC | 1 cut(s) | 66 |
| HinfI | GANTC | 1 cut(s) | 23 |
| HpaII | CCGG | 1 cut(s) | 86 |
| HphI | GGTGA | 1 cut(s) | 148 |
| Hpy99I | CGWCG | 2 cut(s) | 62, 71 |
| HpyAV | CCTTC | 2 cut(s) | 20, 157 |
| HpyCH4IV | ACGT | 1 cut(s) | 66 |
| HpyCH4V | TGCA | 1 cut(s) | 36 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 149 |
| HpySE526I | ACGT | 1 cut(s) | 66 |
| Hsp92I | GRCGYC | 1 cut(s) | 66 |
| LpnPI | CCDG | 3 cut(s) | 56, 99, 128 |
| Lsp1109I | GCAGC | 1 cut(s) | 48 |
| MaeI | CTAG | 1 cut(s) | 108 |
| MaeII | ACGT | 1 cut(s) | 66 |
| MboII | GAAGA | 4 cut(s) | 74, 103, 106, 190 |
| MluCI | AATT | 1 cut(s) | 29 |
| MnlI | CCTC | 1 cut(s) | 177 |
| MslI | CAYNNNNRTG | 1 cut(s) | 60 |
| MspI | CCGG | 1 cut(s) | 86 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 149 |
| NlaIV | GGNNCC | 1 cut(s) | 113 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 63, 66 |
| PfeI | GAWTC | 1 cut(s) | 23 |
| PkrI | GCNGC | 1 cut(s) | 38 |
| PspN4I | GGNNCC | 1 cut(s) | 113 |
| PspPI | GGNCC | 1 cut(s) | 112 |
| RseI | CAYNNNNRTG | 1 cut(s) | 60 |
| SatI | GCNGC | 1 cut(s) | 37 |
| Sau96I | GGNCC | 1 cut(s) | 112 |
| SetI | ASST | 4 cut(s) | 12, 69, 149, 164 |
| SgeI | CNNG | 6 cut(s) | 55, 68, 98, 120, 127, 152 |
| SinI | GGWCC | 1 cut(s) | 112 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 60 |
| Sse9I | AATT | 1 cut(s) | 29 |
| SsiI | CCGC | 2 cut(s) | 49, 141 |
| SspMI | CTAG | 1 cut(s) | 108 |
| TaiI | ACGT | 1 cut(s) | 69 |
| TasI | AATT | 1 cut(s) | 29 |
| TfiI | GAWTC | 1 cut(s) | 23 |
| TseI | GCWGC | 1 cut(s) | 36 |
| VpaK11BI | GGWCC | 1 cut(s) | 112 |
| XspI | CTAG | 1 cut(s) | 108 |
| ZraI | GACGTC | 1 cut(s) | 67 |