Prupe.3G231900_v2.0.a1

cyclic nucleotide-gated ion channel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000678
Physical Location & Seq
Forward (+)
22878538 .. 22884163
5626 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G231900.2

Sequence Viewer

Length: 2172 bp
ATGGCTGCTTTCGAGAATGATGAAGCACCAATGCTAGCTACAAAATCCTTAGATGAACATGCAGATTCTAAATTCCAGAAATTTGAATCCATTTCCCTGAATGTGTTAAATTCCATTCCTCTGAATTCCAAGGAAACTGAAACCAACCTTGTAGACCATACAAGTTGCTTGCAAAGTAACATAAAAAGTCCATTCATGCATGCGTGTGTTCCATTCCAGCAGTTTAGAATGTGCAATGATCCTTACTGCACAATTTGCTCAACATGTCAGAGTTTGAAATCTGCTAAGCAGGATAATCCCAAAGCTTCAAGGCTTTTTGATCCTAAGATCCAGATTGCTTTCTATGGCGATGCTAAAGGCTGGTTTATAAGATCTATCTATTTTATAAATCAATATATTCCAGGAGTCATGAATCCTCATACTAAAGCCATACGACAGTGGAACAAATTCTTTGTCATAGCTTGTTTGGTGGCAATTTTTCTAGACCCTTTGTTTTTCTTCGTGTTATATGCAGAACAGGATAATAAGTGTCTACGTATCAAATGGTACTTGACCTTCATAATGGTGTTTTTCAGAACAATAACTGACTTTATTCACTTTTTGAACATGCTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCCGAGTCTAGAGTGGTTGGTGCAGGAGAGATAGTGGACCAACCAAAGAGAATTGCTCTCAATTATCTCCACGGAAAATTTCTGGTTGACTTATTTATTGTTTTGCCACTTCCTCAAATCATAATTTTTGTAGTTTTGCCTCAATACATCCAATCATCTGGAGCAAATGATGCGAAGAATCTTCTACGTATGGCAGTTCTTTTTCAGTACATTCCAAGGTTGTATAGGTTTCTGCCTCTGCTTGCTGGTCAATCTCCATATGGCTTCGTATTTGAGTCAGCATGGACGAATTTTATAATAAATCTTCTCACTTTCATGTTGGCTGGCCACATTGTCGGCTCCTGCTGGTACCTCTTTGGCTTACAGAGGGTTAATCAATGTCTTCGAAATGCCTGCCATGCCTCTGAAATCCCCCATGACTTGTGCATGAGATTCATAGATTGTGGGTTTGGTAGAATTTTTACGTCCGAGCCAGCATGGGATAACTGGAAAAATAATGGGAGGGCTAATGCTTGTTTTGATGAAGACGGTTTCTCCTATGGAATCTACACTAAAGCTGTCAAGCTCACTACAGCAGATACTGTGACTAGCTATGTATACTCATTGTTTTGGGGATTCCAGCAAATCAGCACTCTGGCAGGAAATCAAGTTCCAAGCTACTTTGTTTGGGAAGTCCTTTTTACCATGGCAATTATCGGACTGGGCCTCTTGCTCTTTGCTCTTCTAATTGGAAATATGCAGAATTTTCTTCAATCTCTGGGACGGAGGAGATTTGAGATGTTGTTGCGACGCCGTGATGTTGAACGGTGGATGAGCTATCGCCACTTACCAGAAGAACTGAGAAGACAAGTAAGGCAAGCAGAACGTTATAATTGGTCTGCAACTAGAGGTGTAAATGAAGAAATGCTTTTGGAGAATTTGCCTGAAGACCTTCAAAGAGATATAAGGCGCCATCTCTTCAAATTTGTGAAAAAAGTTCGGATTTTTGCCCTGCTAGAAGATCCTGTCTTAGATGCAATTTGTGAGAAACTAAAACAAAAGACATACATCAAAGGAAGCAAAATCTTTTATCCTGGAGGCCTGGTCGAGAAGATGGTTTTTATCGTGCGCGGAAGAGTGGAGAGCATTGGGGAGGATGGGATTGTTGTTTCCTTATGTGAAGGGGATGTCTGTGGCGAAGAGCTTCTCACATGGTGTCTAGAGCATCCTTCAGTAAACAATGTCAGGATCCCTGGTCGGAAATTGTTGAGCAACAGGATGGTAAGGTGCTTGAGTAACGTAGAAGCATTTTCACTCCGAGCTGCAGACCTGGAAGAAGTCACCAGTCGTTTTGCAAGATTCTTACGGAATGCACGCGTGCAAGGAGCCATAAGGTATGAATCGCCCTATTGGAGGGGTCTTGCAGCAAAGAGAATTCAAGTAGCATGGAGATACAGGAAGAAGCGTCTAAGTCGTGCAAGCATCCCTTGCTCCTCTCGCCTGCATGACCAATCACTTGATGAAACGCACCGTTTCTCATGTAAAACATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

724

Amino Acids

83.77

Weight (kDa)

9.16

Isoelectric Point (pI)

46.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000678)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17700 AT3G17700
fragaria_vesca FvH4_5g18080 FvH4_5g18080 FvH4_5g18080 FvH4_6g44780
malus_domestica MD06G1236300.v1.1 MD09G1093300.v1.1 MD14G1243200.v1.1
prunus_persica Prupe.1G183800_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1
pyrus_communis pycom06g21110 pycom06g21140 pycom06g21190 pycom14g20450
rosa_chinensis RchiOBHm_Chr2g0161941 RchiOBHm_Chr4g0441651 RchiOBHm_Chr5g0083381 RchiOBHm_Chr6g0281101 RchiOBHm_Chr7g0177531
rosa_laevigata RLG00000005528 RLG00000015203 RLG00000015445 RLG00000021309 RLG00000023742 RLG00000034422 RLG00000036136
rosa_multiflora Rmu_co8432259.1_g000001 Rmu_co8481019.1_g000001 Rmu_sc0003410.1_g000009 Rmu_sc0004618.1_g000030 Rmu_sc0005144.1_g000007 Rmu_sc0008565.1_g000001 Rmu_sc0018381.1_g000003 Rmu_ssc0000330.1_g000004
rosa_roxburghii Rroxscaffold_1G00051700 Rroxscaffold_2G00088450 Rroxscaffold_2G00116130 Rroxscaffold_2G00126580 Rroxscaffold_3G00275780 Rroxscaffold_5G00338690 Rroxscaffold_5G00375080
rosa_rugosa Rorug02G0493400 Rorug04G0058900 Rorug04G0059000 Rorug06G0407100
rosa_samantha Rh2AG220400 Rh2AG282700 Rh2AG329100 Rh2AG559300 Rh2BG572700 Rh2CG542900 Rh2DG582500 Rh4AG135300 Rh4BG096100 Rh4DG026800 Rh4DG329100 Rh5CG271500 Rh6DG096900 Rh7AG006400 Rh7BG006300 Rh7CG006800 Rh7DG006400 Rh7DG278200
rosa_wichuraiana Rw0G014790 Rw1G017310 Rw7G000530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 368, 386, 935, 1509
Acc65I GGTACC 1 cut(s) 987
AccB1I GGYRCC 2 cut(s) 987, 1587
AccI GTMKAC 3 cut(s) 153, 532, 1236
AccII CGCG 2 cut(s) 1749, 1995
AciI CCGC 1 cut(s) 1749
AclI AACGTT 1 cut(s) 1504
AclWI GGATC 6 cut(s) 233, 314, 322, 1634, 1861, 1874
AcoI YGGCCR 1 cut(s) 964
AcuI CTGAAG 3 cut(s) 599, 1584, 1833
AcyI GRCGYC 2 cut(s) 1429, 1588
AdeI CACNNNGTG 1 cut(s) 1833
AfaI GTAC 3 cut(s) 548, 848, 989
AfiI CCNNNNNNNGG 1 cut(s) 2031
AflIII ACRYGT 2 cut(s) 263, 1993
AgsI TTSAA 9 cut(s) 86, 277, 309, 604, 1391, 1442, 1574, 1600, 2057
AjnI CCWGG 5 cut(s) 400, 1711, 1719, 1870, 1947
AloI GAACNNNNNNTCC 2 cut(s) 1272, 1304
AlwI GGATC 6 cut(s) 233, 314, 322, 1634, 1861, 1874
AlwNI CAGNNNCTG 1 cut(s) 1220
Ama87I CYCGRG 1 cut(s) 641
AoxI GGCC 3 cut(s) 964, 1342, 1717
ApeKI GCWGC 3 cut(s) 5, 1940, 2042
ArsI GACNNNNNNTTYG 2 cut(s) 438, 470
Asp700I GAANNNNTTC 3 cut(s) 446, 1569, 1821
Asp718I GGTACC 1 cut(s) 987
AspLEI GCGC 2 cut(s) 1590, 1749
AspS9I GGNCC 2 cut(s) 676, 1342
AsuHPI GGTGA 1 cut(s) 1951
AsuII TTCGAA 1 cut(s) 1024
AsuNHI GCTAGC 1 cut(s) 34
AvaI CYCGRG 1 cut(s) 641
AvaII GGWCC 1 cut(s) 676
BalI TGGCCA 1 cut(s) 966
BamHI GGATCC 1 cut(s) 1866
BanI GGYRCC 2 cut(s) 987, 1587
BarI GAAGNNNNNNTAC 2 cut(s) 539, 571
BbsI GAAGAC 4 cut(s) 1013, 1170, 1489, 1572
BbvI GCAGC 2 cut(s) 1927, 2054
BccI CCATC 4 cut(s) 1599, 1726, 1769, 1891
BceAI ACGGC 1 cut(s) 1416
BcgI CGANNNNNNTGC 2 cut(s) 1014, 1048
BciT130I CCWGG 5 cut(s) 402, 1713, 1721, 1872, 1949
BfaI CTAG 7 cut(s) 35, 482, 648, 1227, 1524, 1634, 1838
BfmI CTRYAG 2 cut(s) 1209, 1941
BfoI RGCGCY 1 cut(s) 1591
BglII AGATCT 1 cut(s) 371
BisI GCNGC 3 cut(s) 6, 1941, 2043
BlpI GCTNAGC 1 cut(s) 285
BlsI GCNGC 3 cut(s) 7, 1942, 2044
Bme1390I CCNGG 5 cut(s) 402, 1713, 1721, 1872, 1949
Bme18I GGWCC 1 cut(s) 676
BmeT110I CYCGRG 1 cut(s) 641
BmgT120I GGNCC 2 cut(s) 676, 1342
BmiI GGNNCC 6 cut(s) 639, 979, 989, 1589, 1868, 2005
BmrFI CCNGG 5 cut(s) 402, 1713, 1721, 1872, 1949
BmrI ACTGGG 1 cut(s) 1349
BmsI GCATC 5 cut(s) 340, 799, 1642, 1852, 2109
BmtI GCTAGC 1 cut(s) 38
BmuI ACTGGG 1 cut(s) 1349
BpiI GAAGAC 4 cut(s) 1013, 1170, 1489, 1572
BplI GAGNNNNNCTC 2 cut(s) 679, 711
BpmI CTGGAG 2 cut(s) 819, 1734
Bpu1102I GCTNAGC 1 cut(s) 285
Bpu14I TTCGAA 1 cut(s) 1024
BpuEI CTTGAG 1 cut(s) 1930
BsaAI YACGTR 2 cut(s) 536, 827
BsaHI GRCGYC 2 cut(s) 1429, 1588
BsaJI CCNNGG 5 cut(s) 129, 709, 854, 1323, 1870
BsaXI ACNNNNNCTCC 6 cut(s) 657, 687, 1157, 1187, 1707, 1737
Bsc4I CCNNNNNNNGG 1 cut(s) 2031
Bse1I ACTGG 3 cut(s) 1130, 1344, 1962
Bse3DI GCAATG 1 cut(s) 241
BseBI CCWGG 5 cut(s) 402, 1713, 1721, 1872, 1949
BseDI CCNNGG 5 cut(s) 129, 709, 854, 1323, 1870
BseGI GGATG 7 cut(s) 786, 1455, 1780, 1810, 1843, 1902, 2100
BseLI CCNNNNNNNGG 1 cut(s) 2031
BseMI GCAATG 1 cut(s) 241
BseMII CTCAG 1 cut(s) 1469
BseNI ACTGG 3 cut(s) 1130, 1344, 1962
BseRI GAGGAG 2 cut(s) 1420, 2101
BseXI GCAGC 2 cut(s) 1927, 2054
BsgI GTGCAG 2 cut(s) 232, 681
Bsh1236I CGCG 2 cut(s) 1749, 1995
BshFI GGCC 3 cut(s) 966, 1344, 1719
BshNI GGYRCC 2 cut(s) 987, 1587
BsiHKCI CYCGRG 1 cut(s) 641
BslFI GGGAC 1 cut(s) 1413
BslI CCNNNNNNNGG 1 cut(s) 2031
BsmFI GGGAC 1 cut(s) 1413
BsmI GAATGC 1 cut(s) 1993
BsnI GGCC 3 cut(s) 966, 1344, 1719
BsoBI CYCGRG 1 cut(s) 641
Bsp119I TTCGAA 1 cut(s) 1024
Bsp143I GATC 6 cut(s) 238, 319, 327, 371, 1639, 1866
Bsp1720I GCTNAGC 1 cut(s) 285
Bsp19I CCATGG 1 cut(s) 1323
BspACI CCGC 1 cut(s) 1749
BspANI GGCC 3 cut(s) 966, 1344, 1719
BspCNI CTCAG 1 cut(s) 1470
BspFNI CGCG 2 cut(s) 1749, 1995
BspHI TCATGA 1 cut(s) 408
BspLI GGNNCC 6 cut(s) 639, 979, 989, 1589, 1868, 2005
BspMAI CTGCAG 1 cut(s) 1945
BspOI GCTAGC 1 cut(s) 38
BspPI GGATC 6 cut(s) 233, 314, 322, 1634, 1861, 1874
BspQI GCTCTTC 2 cut(s) 1365, 1812
BspT104I TTCGAA 1 cut(s) 1024
BspT107I GGYRCC 2 cut(s) 987, 1587
BsrDI GCAATG 1 cut(s) 241
BsrI ACTGG 3 cut(s) 1130, 1344, 1962
BssECI CCNNGG 5 cut(s) 129, 709, 854, 1323, 1870
BssMI GATC 6 cut(s) 238, 319, 327, 371, 1639, 1866
BssNAI GTATAC 1 cut(s) 1237
BssNI GRCGYC 2 cut(s) 1429, 1588
BssT1I CCWWGG 3 cut(s) 129, 854, 1323
Bst1107I GTATAC 1 cut(s) 1237
Bst2UI CCWGG 5 cut(s) 402, 1713, 1721, 1872, 1949
Bst4CI ACNGT 5 cut(s) 438, 1169, 1222, 1446, 2150
Bst6I CTCTTC 4 cut(s) 1365, 1601, 1747, 1812
BstACI GRCGYC 2 cut(s) 1429, 1588
BstAPI GCANNNNNTGC 3 cut(s) 255, 809, 2106
BstBAI YACGTR 2 cut(s) 536, 827
BstBI TTCGAA 1 cut(s) 1024
BstDEI CTNAG 6 cut(s) 49, 285, 324, 1478, 1648, 2087
BstDSI CCRYGG 2 cut(s) 709, 1323
BstENI CCTNNNNNAGG 1 cut(s) 2029
BstF5I GGATG 7 cut(s) 786, 1455, 1780, 1810, 1843, 1902, 2100
BstFNI CGCG 2 cut(s) 1749, 1995
BstH2I RGCGCY 1 cut(s) 1591
BstHHI GCGC 2 cut(s) 1590, 1749
BstKTI GATC 6 cut(s) 241, 322, 330, 374, 1642, 1869
BstMBI GATC 6 cut(s) 238, 319, 327, 371, 1639, 1866
BstMWI GCNNNNNNNGC 6 cut(s) 255, 635, 809, 1037, 2106, 2115
BstNI CCWGG 5 cut(s) 402, 1713, 1721, 1872, 1949
BstNSI RCATGY 4 cut(s) 62, 203, 267, 610
BstSCI CCNGG 5 cut(s) 400, 1711, 1719, 1870, 1947
BstSFI CTRYAG 2 cut(s) 1209, 1941
BstSNI TACGTA 2 cut(s) 536, 827
BstUI CGCG 2 cut(s) 1749, 1995
BstV1I GCAGC 2 cut(s) 1927, 2054
BstV2I GAAGAC 4 cut(s) 1013, 1170, 1489, 1572
BstX2I RGATCY 4 cut(s) 327, 371, 1639, 1866
BstXI CCANNNNNNTGG 1 cut(s) 797
BstYI RGATCY 4 cut(s) 327, 371, 1639, 1866
BstZ17I GTATAC 1 cut(s) 1237
BsuRI GGCC 3 cut(s) 966, 1344, 1719
BtgI CCRYGG 2 cut(s) 709, 1323
BtgZI GCGATG 1 cut(s) 363
BtsCI GGATG 7 cut(s) 786, 1455, 1780, 1810, 1843, 1902, 2100
BtsIMutI CAGTG 1 cut(s) 443
CaiI CAGNNNCTG 1 cut(s) 1220
CciI TCATGA 1 cut(s) 408
CfoI GCGC 2 cut(s) 1590, 1749
Cfr13I GGNCC 2 cut(s) 676, 1342
CseI GACGC 2 cut(s) 1437, 2072
Csp6I GTAC 3 cut(s) 547, 847, 988
CviQI GTAC 3 cut(s) 547, 847, 988
DdeI CTNAG 6 cut(s) 49, 285, 324, 1478, 1648, 2087
DinI GGCGCC 1 cut(s) 1589
DpnI GATC 6 cut(s) 240, 321, 329, 373, 1641, 1868
DpnII GATC 6 cut(s) 238, 319, 327, 371, 1639, 1866
DraIII CACNNNGTG 1 cut(s) 1833
EaeI YGGCCR 1 cut(s) 964
Eam1104I CTCTTC 4 cut(s) 1365, 1601, 1747, 1812
EarI CTCTTC 4 cut(s) 1365, 1601, 1747, 1812
Eco105I TACGTA 2 cut(s) 536, 827
Eco130I CCWWGG 3 cut(s) 129, 854, 1323
Eco147I AGGCCT 1 cut(s) 1719
Eco47I GGWCC 1 cut(s) 676
Eco57I CTGAAG 3 cut(s) 599, 1584, 1833
Eco88I CYCGRG 1 cut(s) 641
EcoNI CCTNNNNNAGG 1 cut(s) 2029
EcoRI GAATTC 2 cut(s) 124, 2052
EcoRII CCWGG 5 cut(s) 400, 1711, 1719, 1870, 1947
EcoT14I CCWWGG 3 cut(s) 129, 854, 1323
EcoT22I ATGCAT 1 cut(s) 201
EgeI GGCGCC 1 cut(s) 1589
EheI GGCGCC 1 cut(s) 1589
ErhI CCWWGG 3 cut(s) 129, 854, 1323
FalI AAGNNNNNCTT 4 cut(s) 1530, 1562, 2089, 2121
FaqI GGGAC 1 cut(s) 1413
FauNDI CATATG 1 cut(s) 898
FblI GTMKAC 3 cut(s) 153, 532, 1236
Fnu4HI GCNGC 3 cut(s) 6, 1941, 2043
FokI GGATG 7 cut(s) 773, 1462, 1787, 1817, 1830, 1909, 2087
Fsp4HI GCNGC 3 cut(s) 6, 1941, 2043
FspBI CTAG 7 cut(s) 35, 482, 648, 1227, 1524, 1634, 1838
GlaI GCGC 2 cut(s) 1589, 1748
GluI GCNGC 3 cut(s) 6, 1941, 2043
GsuI CTGGAG 2 cut(s) 819, 1734
HaeII RGCGCY 1 cut(s) 1591
HaeIII GGCC 3 cut(s) 966, 1344, 1719
HgaI GACGC 2 cut(s) 1437, 2072
HhaI GCGC 2 cut(s) 1590, 1749
Hin1I GRCGYC 2 cut(s) 1429, 1588
Hin6I GCGC 2 cut(s) 1588, 1747
HinP1I GCGC 2 cut(s) 1588, 1747
HincII GTYRAC 1 cut(s) 727
HindII GTYRAC 1 cut(s) 727
HindIII AAGCTT 1 cut(s) 303
HphI GGTGA 1 cut(s) 1951
Hpy166II GTNNAC 6 cut(s) 154, 533, 676, 727, 1237, 1855
Hpy188I TCNGA 9 cut(s) 123, 270, 575, 1045, 1108, 1337, 1620, 1878, 1937
Hpy8I GTNNAC 6 cut(s) 154, 533, 676, 727, 1237, 1855
Hpy99I CGWCG 1 cut(s) 1431
HpyAV CCTTC 4 cut(s) 565, 1580, 1793, 1857
HpyCH4III ACNGT 5 cut(s) 438, 1169, 1222, 1446, 2150
HpyCH4IV ACGT 5 cut(s) 535, 826, 1103, 1504, 1917
HpyF10VI GCNNNNNNNGC 6 cut(s) 255, 635, 809, 1037, 2106, 2115
HpyF3I CTNAG 6 cut(s) 49, 285, 324, 1478, 1648, 2087
HpySE526I ACGT 5 cut(s) 535, 826, 1103, 1504, 1917
Hsp92I GRCGYC 2 cut(s) 1429, 1588
HspAI GCGC 2 cut(s) 1588, 1747
KasI GGCGCC 1 cut(s) 1587
KpnI GGTACC 1 cut(s) 991
Kzo9I GATC 6 cut(s) 238, 319, 327, 371, 1639, 1866
LguI GCTCTTC 2 cut(s) 1365, 1812
LmnI GCTCC 5 cut(s) 643, 800, 983, 2003, 2114
Lsp1109I GCAGC 2 cut(s) 1927, 2054
LweI GCATC 5 cut(s) 340, 799, 1642, 1852, 2109
MaeI CTAG 7 cut(s) 35, 482, 648, 1227, 1524, 1634, 1838
MaeII ACGT 5 cut(s) 535, 826, 1103, 1504, 1917
MaeIII GTNAC 4 cut(s) 176, 1222, 1913, 1957
MalI GATC 6 cut(s) 240, 321, 329, 373, 1641, 1868
MboI GATC 6 cut(s) 238, 319, 327, 371, 1639, 1866
MflI RGATCY 4 cut(s) 327, 371, 1639, 1866
MlsI TGGCCA 1 cut(s) 966
MluI ACGCGT 1 cut(s) 1993
MluNI TGGCCA 1 cut(s) 966
Mly113I GGCGCC 1 cut(s) 1588
MlyI GAGTC 3 cut(s) 414, 653, 923
MmeI TCCRAC 1 cut(s) 1856
Mox20I TGGCCA 1 cut(s) 966
Mph1103I ATGCAT 1 cut(s) 201
MroXI GAANNNNTTC 3 cut(s) 446, 1569, 1821
MscI TGGCCA 1 cut(s) 966
MseI TTAA 2 cut(s) 107, 1011
MslI CAYNNNNRTG 3 cut(s) 204, 563, 953
Msp20I TGGCCA 1 cut(s) 966
MspR9I CCNGG 5 cut(s) 402, 1713, 1721, 1872, 1949
Mva1269I GAATGC 1 cut(s) 1993
MvaI CCWGG 5 cut(s) 402, 1713, 1721, 1872, 1949
MvnI CGCG 2 cut(s) 1749, 1995
MwoI GCNNNNNNNGC 6 cut(s) 255, 635, 809, 1037, 2106, 2115
NarI GGCGCC 1 cut(s) 1588
NcoI CCATGG 1 cut(s) 1323
NdeI CATATG 1 cut(s) 898
NdeII GATC 6 cut(s) 238, 319, 327, 371, 1639, 1866
NheI GCTAGC 1 cut(s) 34
NlaIV GGNNCC 6 cut(s) 639, 979, 989, 1589, 1868, 2005
NmuCI GTSAC 2 cut(s) 1222, 1957
NsiI ATGCAT 1 cut(s) 201
NspI RCATGY 4 cut(s) 62, 203, 267, 610
NspV TTCGAA 1 cut(s) 1024
PaeI GCATGC 1 cut(s) 203
PagI TCATGA 1 cut(s) 408
PceI AGGCCT 1 cut(s) 1719
PciI ACATGT 1 cut(s) 263
PciSI GCTCTTC 2 cut(s) 1365, 1812
PctI GAATGC 1 cut(s) 1993
PdmI GAANNNNTTC 3 cut(s) 446, 1569, 1821
PfeI GAWTC 9 cut(s) 65, 86, 412, 817, 1071, 1182, 1254, 1977, 2018
PfoI TCCNGGA 2 cut(s) 400, 1711
PkrI GCNGC 3 cut(s) 7, 1942, 2044
PleI GAGTC 3 cut(s) 413, 652, 922
PluTI GGCGCC 1 cut(s) 1591
PpsI GAGTC 3 cut(s) 413, 652, 922
Ppu21I YACGTR 2 cut(s) 536, 827
PscI ACATGT 1 cut(s) 263
PsiI TTATAA 4 cut(s) 368, 386, 935, 1509
Psp1406I AACGTT 1 cut(s) 1504
Psp6I CCWGG 5 cut(s) 400, 1711, 1719, 1870, 1947
PspGI CCWGG 5 cut(s) 400, 1711, 1719, 1870, 1947
PspN4I GGNNCC 6 cut(s) 639, 979, 989, 1589, 1868, 2005
PspPI GGNCC 2 cut(s) 676, 1342
PstI CTGCAG 1 cut(s) 1945
PstNI CAGNNNCTG 1 cut(s) 1220
PsuI RGATCY 4 cut(s) 327, 371, 1639, 1866
RsaI GTAC 3 cut(s) 548, 848, 989
RsaNI GTAC 3 cut(s) 547, 847, 988
RseI CAYNNNNRTG 3 cut(s) 204, 563, 953
SapI GCTCTTC 2 cut(s) 1365, 1812
SaqAI TTAA 2 cut(s) 107, 1011
SatI GCNGC 3 cut(s) 6, 1941, 2043
Sau3AI GATC 6 cut(s) 238, 319, 327, 371, 1639, 1866
Sau96I GGNCC 2 cut(s) 676, 1342
SchI GAGTC 3 cut(s) 414, 653, 923
ScrFI CCNGG 5 cut(s) 402, 1713, 1721, 1872, 1949
SfaNI GCATC 5 cut(s) 340, 799, 1642, 1852, 2109
SfcI CTRYAG 2 cut(s) 1209, 1941
SfoI GGCGCC 1 cut(s) 1589
SfuI TTCGAA 1 cut(s) 1024
SinI GGWCC 1 cut(s) 676
SmiMI CAYNNNNRTG 3 cut(s) 204, 563, 953
SmlI CTYRAG 1 cut(s) 1909
SmoI CTYRAG 1 cut(s) 1909
SnaBI TACGTA 2 cut(s) 536, 827
SphI GCATGC 1 cut(s) 203
SseBI AGGCCT 1 cut(s) 1719
SsiI CCGC 1 cut(s) 1749
SspDI GGCGCC 1 cut(s) 1587
SspMI CTAG 7 cut(s) 35, 482, 648, 1227, 1524, 1634, 1838
StuI AGGCCT 1 cut(s) 1719
StyD4I CCNGG 5 cut(s) 400, 1711, 1719, 1870, 1947
StyI CCWWGG 3 cut(s) 129, 854, 1323
TaaI ACNGT 5 cut(s) 438, 1169, 1222, 1446, 2150
TaiI ACGT 5 cut(s) 538, 829, 1106, 1507, 1920
TaqI TCGA 3 cut(s) 12, 1024, 1725
TatI WGTACW 1 cut(s) 846
TfiI GAWTC 9 cut(s) 65, 86, 412, 817, 1071, 1182, 1254, 1977, 2018
Tru1I TTAA 2 cut(s) 107, 1011
Tru9I TTAA 2 cut(s) 107, 1011
TscAI CASTG 1 cut(s) 443
TseFI GTSAC 2 cut(s) 1222, 1957
TseI GCWGC 3 cut(s) 5, 1940, 2042
Tsp45I GTSAC 2 cut(s) 1222, 1957
TspGWI ACGGA 3 cut(s) 726, 1417, 1999
TspRI CASTG 1 cut(s) 443
VpaK11BI GGWCC 1 cut(s) 676
XagI CCTNNNNNAGG 1 cut(s) 2029
XbaI TCTAGA 3 cut(s) 481, 647, 1837
XceI RCATGY 4 cut(s) 62, 203, 267, 610
XmiI GTMKAC 3 cut(s) 153, 532, 1236
XmnI GAANNNNTTC 3 cut(s) 446, 1569, 1821
XspI CTAG 7 cut(s) 35, 482, 648, 1227, 1524, 1634, 1838
Zsp2I ATGCAT 1 cut(s) 201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.