Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0000678

Physical Location & Seq

Genomic Coordinates Forward (+)

18134713 .. 18144018

Gene Structure 9306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G240800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGGCTGGTTATGAAAGAGATGAGGTACCCATGCTATCGGACACTCACCCACAATTATCAGATGAAAATGTGCACTTACAATTTGAGACATTTATGTCACGAACCAGAAGTGCATCAGTTTCCATTCCTATGGACTCTATGGACTCGTCATTTGAAAGGGAGGCTAGCCTTGTAAGCCATACTGGTCCCTTGAGGAGTCGAACAAAAACTCCATTCCTCCCTATGAGTGGTCCATTATATAACCGCAGGCCTGATAACATTTTCCGGCTAACTCAAGCTGTACCAGGGCAAGAAGAAGCAGTCAAACCTGCAGGAGAAAAGTTTCCTTCTACTAATGTGACAAACCAGAATGAAGGGACAGATGACAACTATGCTGGAAAAAATGAACACTTACTGAGATCTGGGCAATTGGGGATGTGCAATGATCCTTACTGCACAACTTGCCCAACATACAATCTCAAGGCTGCTCAACCACAACACTCAAAGGCTTCGGGTATATTTGATCCCAAGTTCCATAATGCTCTCTATGGGGATGCCAAAGGCTGGGCGAGGAGATTTTTCTCTTTTCTGCGTCTATATATTCCTGGAGTTATGAACCCTCATGCTAAAGTGGTGCAACAGTGGAACAAGTTTTTTGTCATTTCATGCTTAGTAGCAATTTTTGTAGATCCATTGTTTTTCTTCGTGCTGTCTGTTCGAAAGGATAATAAATGCATAGTTCTTGATTGGCCCATGACGACAACACTTGTGGTTTTTAGAAGCATGACTGATTTTATATACTTGATGCACATACTCCTTCAGTTTAGATTGGCTTATGTGGCTCCTGAGTCTAGGGTGGTTGGTGCTGGCGAGTTGGTTGACCATCCAAAGAAAATTGCTCGGAATTACCTTCAAGGATATTTTCTAATTGACTTCTTTGTTGTATTACCGCTTCCTCAGATCATAATTTTGTTAGTTCTACGAAAAAACTTGGGATTATCTGGAGCAAACTATGCAAAAAATTTGTTACGTGCTGCAGTTCTTCTTCAGTGCATTCCCAGGTTGTGTAGGTGTCTACCCCTGCTTGCTGGTCAGTCTCCAAGTGGCTTCATATTTGAGTCCGCATGGGCAAACTTCATAATAAATCTTCTCACATTTGTGTTGTCTGGCCATGTTGTTGGGTCGTGCTGGTACCTCTTCGGGTTACAGAGGGTTAATCAATGTTTTCGAGATGTCTGTCATGACTCTGGAATTCGTGGGTGCATGAGCTTCATAGATTGTGGGCATGGAAATGAGATTGAAGGTTCTAAAGTGGAAGATCCAGTACGTGATAGCTGGAAAAACTATACGAATGCTAATGCTTGTTTAGATAAAGATGGTTTTGATTACGGAATCTACAGCCAAGCTGTCAATCTTACAACAGAAAATAGCATAATCACGAGATATGTATACGCACTGTTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGAAATCAAACTCCAAGTTATTTTGTTTGGGAAGTCCTTTTTACAATGGCTATTATTGGCCTAGGTCTCTTGCTTTTTGCTCTTCTCATTGGAAATATGCAGAACTTTCTGCAGGCTCTTGGTCGGAGAAGGTTAGAAATGTCTCTGAGACGTCGTGACGTTGAGCAGTGGATGAGACATAGACGCTTGCCAGGGGAACTTAGAAGGCGAGTACGACAAGCTGAAAGGTACAATTGGGCCGCAACCAGAGGGGTAAATGAAGAAATCCTTTTGGAAAACTTGCCTGAAGACCTTCAGACAGATATAAGACGCCATCTCTTCAAGTTTATTAAGAAAGTACGAATTTTTTCCCTGATGGATGAACCCATCTTGGATTCCATTTGTGGAAGACTAAGACAAAAGATATACATCAAAGGAAGCAAAGTTTTGTACCATGGTGGTCTAATTGAGAAAATGGTTTTTATCGTGCGTGGAAAAATGGAGAGCATTGGAGAAGATGGGATTACAGTTTCCTTATCTGAAGGGGATGTTTGTGGTGAGGAACTTCTCACATGGTGCCTTGAGCATTCTTCAGCGAACAGAGACGGTAAGATCAGGATTCCTGGACAGCGATTGCTTAGCAACAGGATGGTGAGATGCTTAACAAACGTCGAAGCATTTTCACTCCGAGCTGCAGACATTGAAGAAGTCACCAGTCTTTTCTCCAGATTTTTGCGAAAACCACGTGTTCAAGGAGCCATAAGATATGAATCACCTTACTGGAGAGGGCTTGCAGCAAGACGCATTCAAGTAGCATGGAGATACAGGAGAAAACGCCTAAGTCGAGCAGACACCTCTCAATCCCAATCCAATCATATTCATAACCATGCATTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009605 GO:0009607 GO:0009624 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans

Protein Analysis

782

Amino Acids

89.33

Weight (kDa)

9.29

Isoelectric Point (pI)

49.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000678)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17700 AT3G17700
fragaria_vesca	FvH4_5g18080 FvH4_5g18080 FvH4_5g18080 FvH4_6g44780
malus_domestica	MD06G1236300.v1.1 MD09G1093300.v1.1 MD14G1243200.v1.1
prunus_persica	Prupe.1G183800_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1
pyrus_communis	pycom06g21110 pycom06g21140 pycom06g21190 pycom14g20450
rosa_chinensis	RchiOBHm_Chr2g0161941 RchiOBHm_Chr4g0441651 RchiOBHm_Chr5g0083381 RchiOBHm_Chr6g0281101 RchiOBHm_Chr7g0177531
rosa_laevigata	RLG00000005528 RLG00000015203 RLG00000015445 RLG00000021309 RLG00000023742 RLG00000034422 RLG00000036136
rosa_multiflora	Rmu_co8432259.1_g000001 Rmu_co8481019.1_g000001 Rmu_sc0003410.1_g000009 Rmu_sc0004618.1_g000030 Rmu_sc0005144.1_g000007 Rmu_sc0008565.1_g000001 Rmu_sc0018381.1_g000003 Rmu_ssc0000330.1_g000004
rosa_roxburghii	Rroxscaffold_1G00051700 Rroxscaffold_2G00088450 Rroxscaffold_2G00116130 Rroxscaffold_2G00126580 Rroxscaffold_3G00275780 Rroxscaffold_5G00338690 Rroxscaffold_5G00375080
rosa_rugosa	Rorug02G0493400 Rorug04G0058900 Rorug04G0059000 Rorug06G0407100
rosa_samantha	Rh2AG220400 Rh2AG282700 Rh2AG329100 Rh2AG559300 Rh2BG572700 Rh2CG542900 Rh2DG582500 Rh4AG135300 Rh4BG096100 Rh4DG026800 Rh4DG329100 Rh5CG271500 Rh6DG096900 Rh7AG006400 Rh7BG006300 Rh7CG006800 Rh7DG006400 Rh7DG278200
rosa_wichuraiana	Rw0G014790 Rw1G017310 Rw7G000530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2344
AasI	GACNNNNNNGTC	1 cut(s)	94
AatII	GACGTC	1 cut(s)	1624
Acc36I	ACCTGC	1 cut(s)	316
Acc65I	GGTACC	2 cut(s)	25, 1170
AccB1I	GGYRCC	3 cut(s)	25, 1170, 2025
AccB7I	CCANNNNNTGG	1 cut(s)	543
AccI	GTMKAC	2 cut(s)	1054, 1428
AciI	CCGC	4 cut(s)	244, 929, 1101, 1710
AclWI	GGATC	4 cut(s)	419, 497, 662, 1292
AcoI	YGGCCR	1 cut(s)	1147
AcsI	RAATTY	3 cut(s)	1000, 1230, 1812
AcuI	CTGAAG	6 cut(s)	782, 1010, 1748, 1776, 2010, 2025
AcvI	CACGTG	1 cut(s)	2195
AcyI	GRCGYC	2 cut(s)	1621, 1780
AdeI	CACNNNGTG	1 cut(s)	2025
AfaI	GTAC	9 cut(s)	27, 282, 1172, 1305, 1462, 1683, 1700, 1809, 1901
AfiI	CCNNNNNNNGG	2 cut(s)	227, 543
AflIII	ACRYGT	1 cut(s)	2194
AgsI	TTSAA	7 cut(s)	155, 893, 1280, 1792, 2153, 2201, 2258
AjnI	CCWGG	5 cut(s)	283, 583, 1037, 1660, 2071
AleI	CACNNNNGTG	1 cut(s)	1136
AloI	GAACNNNNNNTCC	2 cut(s)	193, 225
AluBI	AGCT	6 cut(s)	278, 1248, 1314, 1385, 1691, 2141
AluI	AGCT	6 cut(s)	278, 1248, 1314, 1385, 1691, 2141
Alw21I	GWGCWC	1 cut(s)	75
Alw26I	GTCTC	7 cut(s)	80, 1080, 1541, 1612, 1617, 1639, 2046
Alw44I	GTGCAC	1 cut(s)	71
AlwI	GGATC	4 cut(s)	419, 497, 662, 1292
AoxI	GGCC	5 cut(s)	248, 728, 1147, 1528, 1707
ApaLI	GTGCAC	1 cut(s)	71
ApeKI	GCWGC	4 cut(s)	464, 1013, 2141, 2243
ApoI	RAATTY	3 cut(s)	1000, 1230, 1812
ArsI	GACNNNNNNTTYG	2 cut(s)	134, 166
Asp700I	GAANNNNTTC	3 cut(s)	321, 1761, 1816
Asp718I	GGTACC	2 cut(s)	25, 1170
AspA2I	CCTAGG	1 cut(s)	1531
AspS9I	GGNCC	4 cut(s)	185, 230, 729, 1707
AsuHPI	GGTGA	5 cut(s)	38, 2018, 2113, 2152, 2214
AsuII	TTCGAA	1 cut(s)	697
AsuNHI	GCTAGC	1 cut(s)	164
AvaII	GGWCC	2 cut(s)	185, 230
AvrII	CCTAGG	1 cut(s)	1531
BaeGI	GKGCMC	1 cut(s)	75
BalI	TGGCCA	1 cut(s)	1149
BanI	GGYRCC	3 cut(s)	25, 1170, 2025
BarI	GAAGNNNNNNTAC	4 cut(s)	915, 947, 1287, 1319
BauI	CACGAG	1 cut(s)	1417
BbrPI	CACGTG	1 cut(s)	2195
BbsI	GAAGAC	2 cut(s)	1764, 1864
Bbv12I	GWGCWC	1 cut(s)	75
BbvI	GCAGC	4 cut(s)	451, 1000, 2128, 2255
BccI	CCATC	7 cut(s)	870, 1349, 1791, 1819, 1844, 1961, 2092
BciT130I	CCWGG	5 cut(s)	285, 585, 1039, 1662, 2073
BcoDI	GTCTC	7 cut(s)	80, 1080, 1541, 1612, 1617, 1639, 2046
BfaI	CTAG	3 cut(s)	165, 831, 1532
BfmI	CTRYAG	5 cut(s)	309, 1014, 1375, 1580, 2142
BfuAI	ACCTGC	1 cut(s)	316
BglII	AGATCT	1 cut(s)	398
BisI	GCNGC	5 cut(s)	465, 1014, 1710, 2142, 2244
BlnI	CCTAGG	1 cut(s)	1531
BlpI	GCTNAGC	1 cut(s)	2087
BlsI	GCNGC	5 cut(s)	466, 1015, 1711, 2143, 2245
BmcAI	AGTACT	1 cut(s)	1462
Bme1390I	CCNGG	5 cut(s)	285, 585, 1039, 1662, 2073
Bme18I	GGWCC	2 cut(s)	185, 230
BmgT120I	GGNCC	4 cut(s)	185, 230, 729, 1707
BmiI	GGNNCC	6 cut(s)	27, 187, 822, 1172, 2027, 2206
BmrFI	CCNGG	5 cut(s)	285, 585, 1039, 1662, 2073
BmsI	GCATC	4 cut(s)	122, 523, 774, 2096
BmtI	GCTAGC	1 cut(s)	168
BpiI	GAAGAC	2 cut(s)	1764, 1864
BpmI	CTGGAG	4 cut(s)	606, 1002, 2158, 2251
Bpu1102I	GCTNAGC	1 cut(s)	2087
Bpu14I	TTCGAA	1 cut(s)	697
BpuEI	CTTGAG	4 cut(s)	211, 258, 443, 2051
BsaAI	YACGTR	3 cut(s)	1010, 1307, 2195
BsaBI	GATNNNNATC	2 cut(s)	1877, 2218
BsaHI	GRCGYC	2 cut(s)	1621, 1780
BsaI	GGTCTC	1 cut(s)	1541
BsaJI	CCNNGG	5 cut(s)	284, 1037, 1531, 1661, 1903
BsaXI	ACNNNNNCTCC	2 cut(s)	193, 223
Bsc4I	CCNNNNNNNGG	2 cut(s)	227, 543
Bse1I	ACTGG	4 cut(s)	187, 1301, 2163, 2234
Bse3DI	GCAATG	1 cut(s)	427
Bse8I	GATNNNNATC	2 cut(s)	1877, 2218
BseBI	CCWGG	5 cut(s)	285, 585, 1039, 1662, 2073
BseDI	CCNNGG	5 cut(s)	284, 1037, 1531, 1661, 1903
BseGI	GGATG	7 cut(s)	420, 538, 862, 1647, 1834, 2002, 2103
BseJI	GATNNNNATC	2 cut(s)	1877, 2218
BseLI	CCNNNNNNNGG	2 cut(s)	227, 543
BseMI	GCAATG	1 cut(s)	427
BseMII	CTCAG	4 cut(s)	386, 816, 950, 1607
BseNI	ACTGG	4 cut(s)	187, 1301, 2163, 2234
BseRI	GAGGAG	2 cut(s)	208, 565
BseSI	GKGCMC	1 cut(s)	75
BseXI	GCAGC	4 cut(s)	451, 1000, 2128, 2255
BseYI	CCCAGC	1 cut(s)	543
BsgI	GTGCAG	1 cut(s)	418
BshFI	GGCC	5 cut(s)	250, 730, 1149, 1530, 1709
BshNI	GGYRCC	3 cut(s)	25, 1170, 2025
BsiHKAI	GWGCWC	1 cut(s)	75
BsiSI	CCGG	1 cut(s)	265
BslFI	GGGAC	2 cut(s)	171, 370
BslI	CCNNNNNNNGG	2 cut(s)	227, 543
BsmAI	GTCTC	7 cut(s)	80, 1080, 1541, 1612, 1617, 1639, 2046
BsmBI	CGTCTC	2 cut(s)	1612, 2046
BsmFI	GGGAC	2 cut(s)	171, 370
BsmI	GAATGC	4 cut(s)	1032, 1336, 2035, 2253
BsnI	GGCC	5 cut(s)	250, 730, 1149, 1530, 1709
Bso31I	GGTCTC	1 cut(s)	1541
Bsp119I	TTCGAA	1 cut(s)	697
Bsp1286I	GDGCHC	1 cut(s)	75
Bsp143I	GATC	7 cut(s)	398, 424, 502, 667, 939, 1297, 2061
Bsp1720I	GCTNAGC	1 cut(s)	2087
Bsp19I	CCATGG	1 cut(s)	1903
BspACI	CCGC	4 cut(s)	244, 929, 1101, 1710
BspANI	GGCC	5 cut(s)	250, 730, 1149, 1530, 1709
BspCNI	CTCAG	4 cut(s)	387, 817, 949, 1608
BspHI	TCATGA	1 cut(s)	1219
BspLI	GGNNCC	6 cut(s)	27, 187, 822, 1172, 2027, 2206
BspMAI	CTGCAG	4 cut(s)	313, 1018, 1584, 2146
BspMI	ACCTGC	1 cut(s)	316
BspOI	GCTAGC	1 cut(s)	168
BspPI	GGATC	4 cut(s)	419, 497, 662, 1292
BspQI	GCTCTTC	1 cut(s)	1557
BspT104I	TTCGAA	1 cut(s)	697
BspT107I	GGYRCC	3 cut(s)	25, 1170, 2025
BspTNI	GGTCTC	1 cut(s)	1541
BsrDI	GCAATG	1 cut(s)	427
BsrI	ACTGG	4 cut(s)	187, 1301, 2163, 2234
BssECI	CCNNGG	5 cut(s)	284, 1037, 1531, 1661, 1903
BssMI	GATC	7 cut(s)	398, 424, 502, 667, 939, 1297, 2061
BssNAI	GTATAC	1 cut(s)	1429
BssNI	GRCGYC	2 cut(s)	1621, 1780
BssSI	CACGAG	1 cut(s)	1417
BssT1I	CCWWGG	2 cut(s)	1531, 1903
Bst1107I	GTATAC	1 cut(s)	1429
Bst2BI	CACGAG	1 cut(s)	1417
Bst2UI	CCWGG	5 cut(s)	285, 585, 1039, 1662, 2073
Bst4CI	ACNGT	4 cut(s)	621, 1437, 1978, 2057
Bst6I	CTCTTC	3 cut(s)	1181, 1557, 1793
BstACI	GRCGYC	2 cut(s)	1621, 1780
BstAPI	GCANNNNNTGC	2 cut(s)	441, 992
BstBAI	YACGTR	3 cut(s)	1010, 1307, 2195
BstBI	TTCGAA	1 cut(s)	697
BstC8I	GCNNGC	7 cut(s)	166, 248, 847, 1065, 1584, 1658, 2241
BstDEI	CTNAG	9 cut(s)	395, 649, 825, 936, 1616, 1670, 1862, 2087, 2288
BstDSI	CCRYGG	1 cut(s)	1903
BstF5I	GGATG	7 cut(s)	420, 538, 862, 1647, 1834, 2002, 2103
BstKTI	GATC	7 cut(s)	401, 427, 505, 670, 942, 1300, 2064
BstMAI	GTCTC	7 cut(s)	80, 1080, 1541, 1612, 1617, 1639, 2046
BstMBI	GATC	7 cut(s)	398, 424, 502, 667, 939, 1297, 2061
BstMWI	GCNNNNNNNGC	4 cut(s)	174, 441, 818, 992
BstNI	CCWGG	5 cut(s)	285, 585, 1039, 1662, 2073
BstSCI	CCNGG	5 cut(s)	283, 583, 1037, 1660, 2071
BstSFI	CTRYAG	5 cut(s)	309, 1014, 1375, 1580, 2142
BstSLI	GKGCMC	1 cut(s)	75
BstV1I	GCAGC	4 cut(s)	451, 1000, 2128, 2255
BstV2I	GAAGAC	2 cut(s)	1764, 1864
BstX2I	RGATCY	3 cut(s)	398, 667, 1297
BstXI	CCANNNNNNTGG	2 cut(s)	130, 1157
BstYI	RGATCY	3 cut(s)	398, 667, 1297
BstZ17I	GTATAC	1 cut(s)	1429
BsuRI	GGCC	5 cut(s)	250, 730, 1149, 1530, 1709
BtgI	CCRYGG	1 cut(s)	1903
BtsCI	GGATG	7 cut(s)	420, 538, 862, 1647, 1834, 2002, 2103
BtsI	GCAGTG	1 cut(s)	1643
BtsIMutI	CAGTG	4 cut(s)	626, 1034, 1433, 1643
BveI	ACCTGC	1 cut(s)	316
Cac8I	GCNNGC	7 cut(s)	166, 248, 847, 1065, 1584, 1658, 2241
CciI	TCATGA	1 cut(s)	1219
Cfr13I	GGNCC	4 cut(s)	185, 230, 729, 1707
CseI	GACGC	4 cut(s)	560, 1662, 1788, 2259
Csp6I	GTAC	9 cut(s)	26, 281, 1171, 1304, 1461, 1682, 1699, 1808, 1900
CspCI	CAANNNNNGTGG	2 cut(s)	729, 764
CviQI	GTAC	9 cut(s)	26, 281, 1171, 1304, 1461, 1682, 1699, 1808, 1900
DdeI	CTNAG	9 cut(s)	395, 649, 825, 936, 1616, 1670, 1862, 2087, 2288
DpnI	GATC	7 cut(s)	400, 426, 504, 669, 941, 1299, 2063
DpnII	GATC	7 cut(s)	398, 424, 502, 667, 939, 1297, 2061
DraIII	CACNNNGTG	1 cut(s)	2025
DrdI	GACNNNNNNGTC	1 cut(s)	94
DseDI	GACNNNNNNGTC	1 cut(s)	94
EaeI	YGGCCR	1 cut(s)	1147
Eam1104I	CTCTTC	3 cut(s)	1181, 1557, 1793
EarI	CTCTTC	3 cut(s)	1181, 1557, 1793
Eco130I	CCWWGG	2 cut(s)	1531, 1903
Eco147I	AGGCCT	1 cut(s)	250
Eco31I	GGTCTC	1 cut(s)	1541
Eco47I	GGWCC	2 cut(s)	185, 230
Eco57I	CTGAAG	6 cut(s)	782, 1010, 1748, 1776, 2010, 2025
Eco72I	CACGTG	1 cut(s)	2195
EcoRI	GAATTC	1 cut(s)	1230
EcoRII	CCWGG	5 cut(s)	283, 583, 1037, 1660, 2071
EcoT14I	CCWWGG	2 cut(s)	1531, 1903
EcoT22I	ATGCAT	2 cut(s)	716, 2341
ErhI	CCWWGG	2 cut(s)	1531, 1903
Esp3I	CGTCTC	2 cut(s)	1612, 2046
FalI	AAGNNNNNCTT	2 cut(s)	1722, 1754
FaqI	GGGAC	2 cut(s)	171, 370
FblI	GTMKAC	2 cut(s)	1054, 1428
Fnu4HI	GCNGC	5 cut(s)	465, 1014, 1710, 2142, 2244
FokI	GGATG	7 cut(s)	427, 545, 849, 1654, 1841, 2009, 2110
Fsp4HI	GCNGC	5 cut(s)	465, 1014, 1710, 2142, 2244
FspBI	CTAG	3 cut(s)	165, 831, 1532
GluI	GCNGC	5 cut(s)	465, 1014, 1710, 2142, 2244
GsaI	CCCAGC	1 cut(s)	547
GsuI	CTGGAG	4 cut(s)	606, 1002, 2158, 2251
HaeIII	GGCC	5 cut(s)	250, 730, 1149, 1530, 1709
HapII	CCGG	1 cut(s)	265
HgaI	GACGC	4 cut(s)	560, 1662, 1788, 2259
Hin1I	GRCGYC	2 cut(s)	1621, 1780
HincII	GTYRAC	1 cut(s)	859
HindII	GTYRAC	1 cut(s)	859
HpaII	CCGG	1 cut(s)	265
HphI	GGTGA	5 cut(s)	38, 2018, 2113, 2152, 2214
Hpy166II	GTNNAC	4 cut(s)	73, 859, 1055, 1429
Hpy188I	TCNGA	9 cut(s)	40, 61, 882, 939, 1596, 1617, 1767, 1990, 2138
Hpy8I	GTNNAC	4 cut(s)	73, 859, 1055, 1429
Hpy99I	CGWCG	2 cut(s)	1626, 2123
HpyAV	CCTTC	9 cut(s)	336, 347, 806, 899, 1274, 1593, 1668, 1772, 1985
HpyCH4III	ACNGT	4 cut(s)	621, 1437, 1978, 2057
HpyCH4IV	ACGT	6 cut(s)	1009, 1306, 1621, 1629, 2118, 2194
HpyF10VI	GCNNNNNNNGC	4 cut(s)	174, 441, 818, 992
HpyF3I	CTNAG	9 cut(s)	395, 649, 825, 936, 1616, 1670, 1862, 2087, 2288
HpySE526I	ACGT	6 cut(s)	1009, 1306, 1621, 1629, 2118, 2194
Hsp92I	GRCGYC	2 cut(s)	1621, 1780
KpnI	GGTACC	2 cut(s)	29, 1174
Kzo9I	GATC	7 cut(s)	398, 424, 502, 667, 939, 1297, 2061
LguI	GCTCTTC	1 cut(s)	1557
LmnI	GCTCC	3 cut(s)	826, 983, 2204
Lsp1109I	GCAGC	4 cut(s)	451, 1000, 2128, 2255
LweI	GCATC	4 cut(s)	122, 523, 774, 2096
MaeI	CTAG	3 cut(s)	165, 831, 1532
MaeII	ACGT	6 cut(s)	1009, 1306, 1621, 1629, 2118, 2194
MaeIII	GTNAC	6 cut(s)	96, 337, 1005, 1182, 1625, 2158
MalI	GATC	7 cut(s)	400, 426, 504, 669, 941, 1299, 2063
MboI	GATC	7 cut(s)	398, 424, 502, 667, 939, 1297, 2061
MfeI	CAATTG	2 cut(s)	407, 1702
MflI	RGATCY	3 cut(s)	398, 667, 1297
MhlI	GDGCHC	1 cut(s)	75
MlsI	TGGCCA	1 cut(s)	1149
MluNI	TGGCCA	1 cut(s)	1149
MlyI	GAGTC	6 cut(s)	128, 137, 205, 836, 1106, 1217
MmeI	TCCRAC	1 cut(s)	1574
Mox20I	TGGCCA	1 cut(s)	1149
Mph1103I	ATGCAT	2 cut(s)	716, 2341
MroXI	GAANNNNTTC	3 cut(s)	321, 1761, 1816
MscI	TGGCCA	1 cut(s)	1149
MseI	TTAA	3 cut(s)	1194, 1800, 2111
MslI	CAYNNNNRTG	4 cut(s)	128, 1136, 1269, 2334
Msp20I	TGGCCA	1 cut(s)	1149
MspI	CCGG	1 cut(s)	265
MspR9I	CCNGG	5 cut(s)	285, 585, 1039, 1662, 2073
MunI	CAATTG	2 cut(s)	407, 1702
Mva1269I	GAATGC	4 cut(s)	1032, 1336, 2035, 2253
MvaI	CCWGG	5 cut(s)	285, 585, 1039, 1662, 2073
MwoI	GCNNNNNNNGC	4 cut(s)	174, 441, 818, 992
NcoI	CCATGG	1 cut(s)	1903
NdeII	GATC	7 cut(s)	398, 424, 502, 667, 939, 1297, 2061
NheI	GCTAGC	1 cut(s)	164
NlaIV	GGNNCC	6 cut(s)	27, 187, 822, 1172, 2027, 2206
NmuCI	GTSAC	4 cut(s)	96, 337, 1625, 2158
NsiI	ATGCAT	2 cut(s)	716, 2341
NspV	TTCGAA	1 cut(s)	697
OliI	CACNNNNGTG	1 cut(s)	1136
PagI	TCATGA	1 cut(s)	1219
PceI	AGGCCT	1 cut(s)	250
PciSI	GCTCTTC	1 cut(s)	1557
PcsI	WCGNNNNNNNCGW	1 cut(s)	2290
PctI	GAATGC	4 cut(s)	1032, 1336, 2035, 2253
PdmI	GAANNNNTTC	3 cut(s)	321, 1761, 1816
PfeI	GAWTC	5 cut(s)	1371, 1446, 1844, 2068, 2219
PflMI	CCANNNNNTGG	1 cut(s)	543
PfoI	TCCNGGA	2 cut(s)	583, 2071
PkrI	GCNGC	5 cut(s)	466, 1015, 1711, 2143, 2245
PleI	GAGTC	6 cut(s)	128, 137, 204, 835, 1105, 1217
PmaCI	CACGTG	1 cut(s)	2195
PmlI	CACGTG	1 cut(s)	2195
PpsI	GAGTC	6 cut(s)	128, 137, 204, 835, 1105, 1217
Ppu21I	YACGTR	3 cut(s)	1010, 1307, 2195
PsiI	TTATAA	1 cut(s)	2344
Psp6I	CCWGG	5 cut(s)	283, 583, 1037, 1660, 2071
PspCI	CACGTG	1 cut(s)	2195
PspFI	CCCAGC	1 cut(s)	543
PspGI	CCWGG	5 cut(s)	283, 583, 1037, 1660, 2071
PspN4I	GGNNCC	6 cut(s)	27, 187, 822, 1172, 2027, 2206
PspPI	GGNCC	4 cut(s)	185, 230, 729, 1707
PstI	CTGCAG	4 cut(s)	313, 1018, 1584, 2146
PsuI	RGATCY	3 cut(s)	398, 667, 1297
RsaI	GTAC	9 cut(s)	27, 282, 1172, 1305, 1462, 1683, 1700, 1809, 1901
RsaNI	GTAC	9 cut(s)	26, 281, 1171, 1304, 1461, 1682, 1699, 1808, 1900
RseI	CAYNNNNRTG	4 cut(s)	128, 1136, 1269, 2334
SapI	GCTCTTC	1 cut(s)	1557
SaqAI	TTAA	3 cut(s)	1194, 1800, 2111
SatI	GCNGC	5 cut(s)	465, 1014, 1710, 2142, 2244
Sau3AI	GATC	7 cut(s)	398, 424, 502, 667, 939, 1297, 2061
Sau96I	GGNCC	4 cut(s)	185, 230, 729, 1707
SbfI	CCTGCAGG	1 cut(s)	313
ScaI	AGTACT	1 cut(s)	1462
SchI	GAGTC	6 cut(s)	128, 137, 205, 836, 1106, 1217
ScrFI	CCNGG	5 cut(s)	285, 585, 1039, 1662, 2073
SdaI	CCTGCAGG	1 cut(s)	313
SduI	GDGCHC	1 cut(s)	75
SfaNI	GCATC	4 cut(s)	122, 523, 774, 2096
SfcI	CTRYAG	5 cut(s)	309, 1014, 1375, 1580, 2142
SfuI	TTCGAA	1 cut(s)	697
SinI	GGWCC	2 cut(s)	185, 230
SmiMI	CAYNNNNRTG	4 cut(s)	128, 1136, 1269, 2334
SmlI	CTYRAG	4 cut(s)	190, 273, 458, 2030
SmoI	CTYRAG	4 cut(s)	190, 273, 458, 2030
Sse8387I	CCTGCAGG	1 cut(s)	313
SseBI	AGGCCT	1 cut(s)	250
SsiI	CCGC	4 cut(s)	244, 929, 1101, 1710
SspMI	CTAG	3 cut(s)	165, 831, 1532
StuI	AGGCCT	1 cut(s)	250
StyD4I	CCNGG	5 cut(s)	283, 583, 1037, 1660, 2071
StyI	CCWWGG	2 cut(s)	1531, 1903
TaaI	ACNGT	4 cut(s)	621, 1437, 1978, 2057
TaiI	ACGT	6 cut(s)	1012, 1309, 1624, 1632, 2121, 2197
TaqI	TCGA	5 cut(s)	199, 697, 1207, 2121, 2293
TatI	WGTACW	1 cut(s)	1460
TauI	GCSGC	1 cut(s)	1712
TfiI	GAWTC	5 cut(s)	1371, 1446, 1844, 2068, 2219
Tru1I	TTAA	3 cut(s)	1194, 1800, 2111
Tru9I	TTAA	3 cut(s)	1194, 1800, 2111
TscAI	CASTG	4 cut(s)	626, 1034, 1440, 1643
TseFI	GTSAC	4 cut(s)	96, 337, 1625, 2158
TseI	GCWGC	4 cut(s)	464, 1013, 2141, 2243
Tsp45I	GTSAC	4 cut(s)	96, 337, 1625, 2158
TspGWI	ACGGA	1 cut(s)	1383
TspRI	CASTG	4 cut(s)	626, 1034, 1440, 1643
Van91I	CCANNNNNTGG	1 cut(s)	543
VneI	GTGCAC	1 cut(s)	71
VpaK11BI	GGWCC	2 cut(s)	185, 230
XapI	RAATTY	3 cut(s)	1000, 1230, 1812
XmaJI	CCTAGG	1 cut(s)	1531
XmiI	GTMKAC	2 cut(s)	1054, 1428
XmnI	GAANNNNTTC	3 cut(s)	321, 1761, 1816
XspI	CTAG	3 cut(s)	165, 831, 1532
ZraI	GACGTC	1 cut(s)	1622
ZrmI	AGTACT	1 cut(s)	1462
Zsp2I	ATGCAT	2 cut(s)	716, 2341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.