RchiOBHm_Chr2g0161941

cyclic nucleotide-gated ion channel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000678
Physical Location & Seq
Forward (+)
77775804 .. 77781573
5770 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53026

Sequence Viewer

Length: 2106 bp
ATGGAATCCAGTGGAACTGGAATTGGCCGTGTAGACCATACAGGTTCCTTACAGATTGATAGCAAAAATCCTTTCACACCTGCATGTGTTCCATTCCAGCAGTTTACAGATTGCAATGATCCTCACTGCACATTTTGCAAACCACGTCATAGTTTGAAATCAGTTCAACACAAAAACTACATAGCTTCAAGTTTGTTTGATCATAAGCTCCATAATATTCTGTATGGTGATGCTAAAGGATGGTTTAAAAGAACCTGTTCTTTTCTGTATCCATATGTTCTCGGAGTTGTGAACCCTGATGCTAAAGCTGTACGAGGATGGAACAAGTTCTTTGTCATATCTTGCATGGTGGCAGTTTTTGTAGACCCGCTATTTTTCTTCTTGTTATCTGCACGAGAGGATTATAAGTGCATAACTATTAACTGGGCCATGACCATAATATTAGTGTTTTTCCGGACACTGACGGACTTCATTTACCTATTGCACATGCTTCTTCAGTATAGGTTGGCTTATGTGGCTCCTGGGTCTAGAGTGGTTGGTACGGGAGAGATAGTAGACCAACCATATAAAATTGCTCTCAATTATCTCCATGGAAACTTTTTAGTAGACTTAATTATTGTTTTGCCGCTTCCTCAGATCATAATGTTGTCGGTTGTTCCTTTGGGATCATTTCGAGCAAATCAAACAAAGAATCTTCTCCGCCTGGCAGTATTTTTTCAATACTTTCCCAGGTTGTATAGGGTTCTGCCCCTGCTTGCTGGTCAATCTCCAAATGGATTCTTCGTATTCGAGTCAGCTTGGACAAATTTTTTTATAAACACTCTCACTTTCTTGTTGGTTGGCCATGTTATTGGGTCATGCTGGTACCTTCTTGGCTTACAGAGGGTTAACCAATGTCTTCGAGATGCCTGCCATAACTCTAATCTGCAGTCATGCGGGAATTTAATAGATTGTTGCAATGCTCAATCTATTCCAGAGTCAACTAGATGGAGAGAAAATGAGAAGGCTGCTGGTTGTTTTAATCCGGAAGGAGATTTCTCCTATGGAATATATACTCCAGTTGTCAATCTCACTACAAGAGATAGCATGACTAAATATTTATACTCATTGTTTTGGGGATTCCAGCAAATCAGCACTTTGGCAGGAAATCAAACTCCAAGCTATTTTAATGGGGAAATTGTTTTTACCATGGTAATTATTGGACTGGGACTCTTCTTCTTTGCTCTTCTAATTGGAAATATGCAGAATTTTCTTCAGTCTCTTGGACGGAGGAGGTTTGATATGTTATTGCGGAGTCGTGATGTTGAGCAGTGGATGAGTTATAGGAACTTACCAGAAGAGCTTAGAAGGCAAGTAAGAAATGCTGAACGGTATAATTGGTCAGCCACACAAGGTGTAAATGAAGAACTGATTCTGGAAAATTTGCCCGAACACCTTCAAAGAAATATAAGACGCCATCTCTTCGAATTTGTGAAGAAAGTTCGGATTTTTGCTCTGATGGACGATCCTATCTTAGATGCAATATGTGAGAAACTAAAACAAAAAACATACATTGAAGGAAATGAAATTTTGTATCCTGGAGGTATGGTTGAGAATATGGTTTTTATTGTGCGTGGAAAGATGGAGAGCATTGGGGCGGATGGGACTGTTGATGACACATTAAAGGAAGGTGATGTTTGTGGTGAGGAACTTCTCAGATGGTGTCTTGAGGCTTCTGTAAACACTGATGGGAAAAATGTCAGGATCACTGGTCGGAGATTGCTCAGCAACAGATTGGTAAGGTGCTTAACTAACGTGGAAGCATTTCAACTCCGAGCTGCAGACCTCGAACAGTTCACTGGACGTTTTGCAAGATACTTGCGGAATCCACGTGTACAAGGAGCCATAAGGTATGAATCTCCGTACTGGAGAGGGCTTGCAGCAAAGCGAATTCAAGTAGCTTGGAGGTACAGGCAAAAGCGTCTAAATCGCACAAGCCCACAGAGTTGCCCCCGAAACCCTTACTCCGATCAAAGTCCAGCGGACTTCTTGAGATCAACTTATCGCCCACATAGTTGGGGACTTGGAAATGATGCTCGGGAGCGGGAACACTGGGGCCTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
Ion_trans

Protein Analysis

701

Amino Acids

80.84

Weight (kDa)

9.08

Isoelectric Point (pI)

43.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 109 - 424 1.3e-18 Ion transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000678)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17700 AT3G17700
fragaria_vesca FvH4_5g18080 FvH4_5g18080 FvH4_5g18080 FvH4_6g44780
malus_domestica MD06G1236300.v1.1 MD09G1093300.v1.1 MD14G1243200.v1.1
prunus_persica Prupe.1G183800_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.3G231900_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1 Prupe.5G240800_v2.0.a1
pyrus_communis pycom06g21110 pycom06g21140 pycom06g21190 pycom14g20450
rosa_chinensis RchiOBHm_Chr2g0161941 RchiOBHm_Chr4g0441651 RchiOBHm_Chr5g0083381 RchiOBHm_Chr6g0281101 RchiOBHm_Chr7g0177531
rosa_laevigata RLG00000005528 RLG00000015203 RLG00000015445 RLG00000021309 RLG00000023742 RLG00000034422 RLG00000036136
rosa_multiflora Rmu_co8432259.1_g000001 Rmu_co8481019.1_g000001 Rmu_sc0003410.1_g000009 Rmu_sc0004618.1_g000030 Rmu_sc0005144.1_g000007 Rmu_sc0008565.1_g000001 Rmu_sc0018381.1_g000003 Rmu_ssc0000330.1_g000004
rosa_roxburghii Rroxscaffold_1G00051700 Rroxscaffold_2G00088450 Rroxscaffold_2G00116130 Rroxscaffold_2G00126580 Rroxscaffold_3G00275780 Rroxscaffold_5G00338690 Rroxscaffold_5G00375080
rosa_rugosa Rorug02G0493400 Rorug04G0058900 Rorug04G0059000 Rorug06G0407100
rosa_samantha Rh2AG220400 Rh2AG282700 Rh2AG329100 Rh2AG559300 Rh2BG572700 Rh2CG542900 Rh2DG582500 Rh4AG135300 Rh4BG096100 Rh4DG026800 Rh4DG329100 Rh5CG271500 Rh6DG096900 Rh7AG006400 Rh7BG006300 Rh7CG006800 Rh7DG006400 Rh7DG278200
rosa_wichuraiana Rw0G014790 Rw1G017310 Rw7G000530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 405, 815
AarI CACCTGC 1 cut(s) 88
Acc36I ACCTGC 1 cut(s) 88
Acc65I GGTACC 1 cut(s) 864
AccB1I GGYRCC 1 cut(s) 864
AccBSI CCGCTC 1 cut(s) 2083
AccI GTMKAC 4 cut(s) 33, 363, 555, 606
AccIII TCCGGA 2 cut(s) 453, 1024
AciI CCGC 9 cut(s) 368, 626, 700, 936, 1291, 1637, 1861, 2021, 2083
AclWI GGATC 4 cut(s) 113, 673, 1499, 1751
AcoI YGGCCR 2 cut(s) 25, 841
AcsI RAATTY 7 cut(s) 805, 940, 1246, 1420, 1466, 1566, 1929
AcuI CTGAAG 2 cut(s) 479, 1238
AcvI CACGTG 1 cut(s) 1871
AcyI GRCGYC 1 cut(s) 1453
AdeI CACNNNGTG 1 cut(s) 1394
AfaI GTAC 6 cut(s) 312, 541, 866, 1875, 1904, 1949
AflIII ACRYGT 1 cut(s) 1870
AgsI TTSAA 8 cut(s) 157, 167, 189, 719, 1439, 1556, 1808, 1934
AjiI CACGTC 1 cut(s) 146
AjnI CCWGG 4 cut(s) 520, 702, 728, 1576
AluBI AGCT 8 cut(s) 185, 208, 308, 797, 1161, 1342, 1817, 1940
AluI AGCT 8 cut(s) 185, 208, 308, 797, 1161, 1342, 1817, 1940
Alw26I GTCTC 1 cut(s) 1263
AlwI GGATC 4 cut(s) 113, 673, 1499, 1751
Ama87I CYCGRG 1 cut(s) 2076
Aor13HI TCCGGA 2 cut(s) 453, 1024
AoxI GGCC 4 cut(s) 25, 426, 841, 2095
ApeKI GCWGC 3 cut(s) 1007, 1817, 1919
ApoI RAATTY 7 cut(s) 805, 940, 1246, 1420, 1466, 1566, 1929
Asp700I GAANNNNTTC 5 cut(s) 256, 326, 1410, 1434, 1803
Asp718I GGTACC 1 cut(s) 864
AspS9I GGNCC 2 cut(s) 426, 2095
AsuHPI GGTGA 3 cut(s) 239, 1682, 1694
AsuII TTCGAA 1 cut(s) 1464
AvaI CYCGRG 1 cut(s) 2076
BalI TGGCCA 1 cut(s) 843
BanI GGYRCC 1 cut(s) 864
BauI CACGAG 1 cut(s) 393
BbrPI CACGTG 1 cut(s) 1871
BbsI GAAGAC 1 cut(s) 890
BbvI GCAGC 3 cut(s) 994, 1804, 1931
BccI CCATC 9 cut(s) 234, 312, 981, 1464, 1492, 1615, 1634, 1692, 1721
BceAI ACGGC 1 cut(s) 12
BcgI CGANNNNNNTGC 2 cut(s) 891, 925
BciT130I CCWGG 4 cut(s) 522, 704, 730, 1578
BciVI GTATCC 2 cut(s) 279, 1584
BclI TGATCA 1 cut(s) 199
BcoDI GTCTC 1 cut(s) 1263
BfaI CTAG 2 cut(s) 528, 984
BfmI CTRYAG 2 cut(s) 926, 1818
BfuAI ACCTGC 1 cut(s) 88
BfuI GTATCC 2 cut(s) 279, 1584
BisI GCNGC 4 cut(s) 626, 1008, 1818, 1920
BlpI GCTNAGC 1 cut(s) 1763
BlsI GCNGC 4 cut(s) 627, 1009, 1819, 1921
Bme1390I CCNGG 4 cut(s) 522, 704, 730, 1578
BmeT110I CYCGRG 1 cut(s) 2076
BmgBI CACGTC 1 cut(s) 146
BmgT120I GGNCC 2 cut(s) 426, 2095
BmiI GGNNCC 5 cut(s) 46, 519, 866, 1882, 2096
BmrFI CCNGG 4 cut(s) 522, 704, 730, 1578
BmrI ACTGGG 3 cut(s) 433, 1214, 2101
BmsI GCATC 5 cut(s) 220, 289, 895, 1507, 2062
BmuI ACTGGG 3 cut(s) 433, 1214, 2101
BpiI GAAGAC 1 cut(s) 890
BpmI CTGGAG 3 cut(s) 1041, 1599, 1927
Bpu1102I GCTNAGC 1 cut(s) 1763
Bpu14I TTCGAA 1 cut(s) 1464
BpuEI CTTGAG 2 cut(s) 1727, 2050
BsaAI YACGTR 1 cut(s) 1871
BsaHI GRCGYC 1 cut(s) 1453
BsaJI CCNNGG 4 cut(s) 521, 589, 728, 1188
BsaWI WCCGGW 2 cut(s) 453, 1024
BsaXI ACNNNNNCTCC 6 cut(s) 537, 567, 1572, 1602, 1988, 2018
Bse1I ACTGG 9 cut(s) 9, 22, 428, 1058, 1209, 1753, 1843, 1910, 2096
Bse3DI GCAATG 2 cut(s) 121, 964
BseAI TCCGGA 2 cut(s) 453, 1024
BseBI CCWGG 4 cut(s) 522, 704, 730, 1578
BseDI CCNNGG 4 cut(s) 521, 589, 728, 1188
BseGI GGATG 4 cut(s) 245, 323, 1320, 1645
BseMI GCAATG 2 cut(s) 121, 964
BseMII CTCAG 3 cut(s) 647, 1708, 1777
BseNI ACTGG 9 cut(s) 9, 22, 428, 1058, 1209, 1753, 1843, 1910, 2096
BseRI GAGGAG 1 cut(s) 1285
BseXI GCAGC 3 cut(s) 994, 1804, 1931
BsgI GTGCAG 2 cut(s) 112, 375
BshFI GGCC 4 cut(s) 27, 428, 843, 2097
BshNI GGYRCC 1 cut(s) 864
BsiHKCI CYCGRG 1 cut(s) 2076
BsiSI CCGG 2 cut(s) 454, 1025
BslFI GGGAC 3 cut(s) 1221, 1657, 2073
BsmAI GTCTC 1 cut(s) 1263
BsmFI GGGAC 3 cut(s) 1221, 1657, 2073
BsnI GGCC 4 cut(s) 27, 428, 843, 2097
BsoBI CYCGRG 1 cut(s) 2076
Bsp119I TTCGAA 1 cut(s) 1464
Bsp13I TCCGGA 2 cut(s) 453, 1024
Bsp1407I TGTACA 1 cut(s) 1873
Bsp143I GATC 8 cut(s) 118, 199, 636, 665, 1504, 1743, 2008, 2033
Bsp1720I GCTNAGC 1 cut(s) 1763
Bsp19I CCATGG 2 cut(s) 589, 1188
BspACI CCGC 9 cut(s) 368, 626, 700, 936, 1291, 1637, 1861, 2021, 2083
BspANI GGCC 4 cut(s) 27, 428, 843, 2097
BspCNI CTCAG 3 cut(s) 646, 1707, 1776
BspEI TCCGGA 2 cut(s) 453, 1024
BspLI GGNNCC 5 cut(s) 46, 519, 866, 1882, 2096
BspMAI CTGCAG 2 cut(s) 930, 1822
BspMI ACCTGC 1 cut(s) 88
BspPI GGATC 4 cut(s) 113, 673, 1499, 1751
BspQI GCTCTTC 2 cut(s) 1230, 1332
BspT104I TTCGAA 1 cut(s) 1464
BspT107I GGYRCC 1 cut(s) 864
BsrBI CCGCTC 1 cut(s) 2083
BsrDI GCAATG 2 cut(s) 121, 964
BsrGI TGTACA 1 cut(s) 1873
BsrI ACTGG 9 cut(s) 9, 22, 428, 1058, 1209, 1753, 1843, 1910, 2096
BssECI CCNNGG 4 cut(s) 521, 589, 728, 1188
BssMI GATC 8 cut(s) 118, 199, 636, 665, 1504, 1743, 2008, 2033
BssNI GRCGYC 1 cut(s) 1453
BssSI CACGAG 1 cut(s) 393
BssT1I CCWWGG 2 cut(s) 589, 1188
Bst2BI CACGAG 1 cut(s) 393
Bst2UI CCWGG 4 cut(s) 522, 704, 730, 1578
Bst4CI ACNGT 3 cut(s) 1371, 1648, 1833
Bst6I CTCTTC 4 cut(s) 1217, 1230, 1332, 1466
BstACI GRCGYC 1 cut(s) 1453
BstAPI GCANNNNNTGC 1 cut(s) 135
BstAUI TGTACA 1 cut(s) 1873
BstBAI YACGTR 1 cut(s) 1871
BstBI TTCGAA 1 cut(s) 1464
BstC8I GCNNGC 3 cut(s) 756, 910, 1917
BstDEI CTNAG 5 cut(s) 633, 1343, 1513, 1694, 1763
BstDSI CCRYGG 2 cut(s) 589, 1188
BstF5I GGATG 4 cut(s) 245, 323, 1320, 1645
BstKTI GATC 8 cut(s) 121, 202, 639, 668, 1507, 1746, 2011, 2036
BstMAI GTCTC 1 cut(s) 1263
BstMBI GATC 8 cut(s) 118, 199, 636, 665, 1504, 1743, 2008, 2033
BstMWI GCNNNNNNNGC 3 cut(s) 135, 515, 1348
BstNI CCWGG 4 cut(s) 522, 704, 730, 1578
BstNSI RCATGY 2 cut(s) 87, 490
BstSCI CCNGG 4 cut(s) 520, 702, 728, 1576
BstSFI CTRYAG 2 cut(s) 926, 1818
BstV1I GCAGC 3 cut(s) 994, 1804, 1931
BstV2I GAAGAC 1 cut(s) 890
BstXI CCANNNNNNTGG 2 cut(s) 851, 2055
BsuI GTATCC 2 cut(s) 279, 1584
BsuRI GGCC 4 cut(s) 27, 428, 843, 2097
BtgI CCRYGG 2 cut(s) 589, 1188
BtrI CACGTC 1 cut(s) 146
BtsCI GGATG 4 cut(s) 245, 323, 1320, 1645
BtsI GCAGTG 2 cut(s) 124, 1316
BtsIMutI CAGTG 8 cut(s) 16, 124, 458, 1316, 1722, 1746, 1836, 2089
BveI ACCTGC 1 cut(s) 88
Cac8I GCNNGC 3 cut(s) 756, 910, 1917
Cfr13I GGNCC 2 cut(s) 426, 2095
CseI GACGC 2 cut(s) 1461, 1949
Csp6I GTAC 6 cut(s) 311, 540, 865, 1874, 1903, 1948
CviQI GTAC 6 cut(s) 311, 540, 865, 1874, 1903, 1948
DdeI CTNAG 5 cut(s) 633, 1343, 1513, 1694, 1763
DpnI GATC 8 cut(s) 120, 201, 638, 667, 1506, 1745, 2010, 2035
DpnII GATC 8 cut(s) 118, 199, 636, 665, 1504, 1743, 2008, 2033
DraI TTTAAA 1 cut(s) 247
DraIII CACNNNGTG 1 cut(s) 1394
EaeI YGGCCR 2 cut(s) 25, 841
Eam1104I CTCTTC 4 cut(s) 1217, 1230, 1332, 1466
EarI CTCTTC 4 cut(s) 1217, 1230, 1332, 1466
EciI GGCGGA 2 cut(s) 689, 1652
Eco130I CCWWGG 2 cut(s) 589, 1188
Eco57I CTGAAG 2 cut(s) 479, 1238
Eco72I CACGTG 1 cut(s) 1871
Eco88I CYCGRG 1 cut(s) 2076
EcoO109I RGGNCCY 1 cut(s) 2095
EcoRI GAATTC 1 cut(s) 1929
EcoRII CCWGG 4 cut(s) 520, 702, 728, 1576
EcoT14I CCWWGG 2 cut(s) 589, 1188
ErhI CCWWGG 2 cut(s) 589, 1188
FaqI GGGAC 3 cut(s) 1221, 1657, 2073
FauI CCCGC 3 cut(s) 375, 929, 2076
FauNDI CATATG 1 cut(s) 274
FbaI TGATCA 1 cut(s) 199
FblI GTMKAC 4 cut(s) 33, 363, 555, 606
Fnu4HI GCNGC 4 cut(s) 626, 1008, 1818, 1920
FokI GGATG 4 cut(s) 252, 330, 1327, 1652
Fsp4HI GCNGC 4 cut(s) 626, 1008, 1818, 1920
FspBI CTAG 2 cut(s) 528, 984
GluI GCNGC 4 cut(s) 626, 1008, 1818, 1920
GsuI CTGGAG 3 cut(s) 1041, 1599, 1927
HaeIII GGCC 4 cut(s) 27, 428, 843, 2097
HapII CCGG 2 cut(s) 454, 1025
HgaI GACGC 2 cut(s) 1461, 1949
Hin1I GRCGYC 1 cut(s) 1453
HincII GTYRAC 2 cut(s) 889, 981
HindII GTYRAC 2 cut(s) 889, 981
HpaI GTTAAC 1 cut(s) 889
HpaII CCGG 2 cut(s) 454, 1025
HphI GGTGA 3 cut(s) 239, 1682, 1694
Hpy188I TCNGA 9 cut(s) 284, 636, 1485, 1497, 1697, 1755, 1814, 2008, 2105
HpyAV CCTTC 7 cut(s) 878, 997, 1022, 1341, 1445, 1550, 1661
HpyCH4III ACNGT 3 cut(s) 1371, 1648, 1833
HpyCH4IV ACGT 4 cut(s) 145, 1794, 1843, 1870
HpyF10VI GCNNNNNNNGC 3 cut(s) 135, 515, 1348
HpyF3I CTNAG 5 cut(s) 633, 1343, 1513, 1694, 1763
HpySE526I ACGT 4 cut(s) 145, 1794, 1843, 1870
Hsp92I GRCGYC 1 cut(s) 1453
Kpn2I TCCGGA 2 cut(s) 453, 1024
KpnI GGTACC 1 cut(s) 868
Ksp22I TGATCA 1 cut(s) 199
KspAI GTTAAC 1 cut(s) 889
Kzo9I GATC 8 cut(s) 118, 199, 636, 665, 1504, 1743, 2008, 2033
LguI GCTCTTC 2 cut(s) 1230, 1332
LmnI GCTCC 4 cut(s) 213, 523, 1880, 2080
Lsp1109I GCAGC 3 cut(s) 994, 1804, 1931
LweI GCATC 5 cut(s) 220, 289, 895, 1507, 2062
MaeI CTAG 2 cut(s) 528, 984
MaeII ACGT 4 cut(s) 145, 1794, 1843, 1870
MalI GATC 8 cut(s) 120, 201, 638, 667, 1506, 1745, 2010, 2035
MbiI CCGCTC 1 cut(s) 2083
MboI GATC 8 cut(s) 118, 199, 636, 665, 1504, 1743, 2008, 2033
MlsI TGGCCA 1 cut(s) 843
MluNI TGGCCA 1 cut(s) 843
MlyI GAGTC 4 cut(s) 800, 986, 1203, 1303
MmeI TCCRAC 1 cut(s) 1733
Mox20I TGGCCA 1 cut(s) 843
MroI TCCGGA 2 cut(s) 453, 1024
MroXI GAANNNNTTC 5 cut(s) 256, 326, 1410, 1434, 1803
MscI TGGCCA 1 cut(s) 843
MseI TTAA 9 cut(s) 246, 420, 611, 888, 944, 1020, 1167, 1661, 1787
MslI CAYNNNNRTG 1 cut(s) 82
Msp20I TGGCCA 1 cut(s) 843
MspA1I CMGCKG 1 cut(s) 2021
MspI CCGG 2 cut(s) 454, 1025
MspR9I CCNGG 4 cut(s) 522, 704, 730, 1578
MvaI CCWGG 4 cut(s) 522, 704, 730, 1578
MwoI GCNNNNNNNGC 3 cut(s) 135, 515, 1348
NcoI CCATGG 2 cut(s) 589, 1188
NdeI CATATG 1 cut(s) 274
NdeII GATC 8 cut(s) 118, 199, 636, 665, 1504, 1743, 2008, 2033
NlaIV GGNNCC 5 cut(s) 46, 519, 866, 1882, 2096
NspI RCATGY 2 cut(s) 87, 490
NspV TTCGAA 1 cut(s) 1464
PaqCI CACCTGC 1 cut(s) 88
PciSI GCTCTTC 2 cut(s) 1230, 1332
PdmI GAANNNNTTC 5 cut(s) 256, 326, 1410, 1434, 1803
PfeI GAWTC 7 cut(s) 5, 691, 777, 1119, 1411, 1864, 1895
PfoI TCCNGGA 1 cut(s) 1576
PkrI GCNGC 4 cut(s) 627, 1009, 1819, 1921
PleI GAGTC 4 cut(s) 799, 985, 1203, 1302
PmaCI CACGTG 1 cut(s) 1871
PmlI CACGTG 1 cut(s) 1871
PpsI GAGTC 4 cut(s) 799, 985, 1203, 1302
Ppu21I YACGTR 1 cut(s) 1871
PsiI TTATAA 2 cut(s) 405, 815
Psp6I CCWGG 4 cut(s) 520, 702, 728, 1576
PspCI CACGTG 1 cut(s) 1871
PspGI CCWGG 4 cut(s) 520, 702, 728, 1576
PspN4I GGNNCC 5 cut(s) 46, 519, 866, 1882, 2096
PspPI GGNCC 2 cut(s) 426, 2095
PstI CTGCAG 2 cut(s) 930, 1822
RsaI GTAC 6 cut(s) 312, 541, 866, 1875, 1904, 1949
RsaNI GTAC 6 cut(s) 311, 540, 865, 1874, 1903, 1948
RseI CAYNNNNRTG 1 cut(s) 82
SapI GCTCTTC 2 cut(s) 1230, 1332
SaqAI TTAA 9 cut(s) 246, 420, 611, 888, 944, 1020, 1167, 1661, 1787
SatI GCNGC 4 cut(s) 626, 1008, 1818, 1920
Sau3AI GATC 8 cut(s) 118, 199, 636, 665, 1504, 1743, 2008, 2033
Sau96I GGNCC 2 cut(s) 426, 2095
SchI GAGTC 4 cut(s) 800, 986, 1203, 1303
ScrFI CCNGG 4 cut(s) 522, 704, 730, 1578
SfaNI GCATC 5 cut(s) 220, 289, 895, 1507, 2062
SfcI CTRYAG 2 cut(s) 926, 1818
SfuI TTCGAA 1 cut(s) 1464
SmiMI CAYNNNNRTG 1 cut(s) 82
SmlI CTYRAG 2 cut(s) 1706, 2029
SmoI CTYRAG 2 cut(s) 1706, 2029
SsiI CCGC 9 cut(s) 368, 626, 700, 936, 1291, 1637, 1861, 2021, 2083
SspI AATATT 3 cut(s) 217, 441, 1097
SspMI CTAG 2 cut(s) 528, 984
StyD4I CCNGG 4 cut(s) 520, 702, 728, 1576
StyI CCWWGG 2 cut(s) 589, 1188
TaaI ACNGT 3 cut(s) 1371, 1648, 1833
TaiI ACGT 4 cut(s) 148, 1797, 1846, 1873
TaqI TCGA 5 cut(s) 673, 789, 901, 1464, 1827
TatI WGTACW 1 cut(s) 1873
TauI GCSGC 1 cut(s) 628
TfiI GAWTC 7 cut(s) 5, 691, 777, 1119, 1411, 1864, 1895
Tru1I TTAA 9 cut(s) 246, 420, 611, 888, 944, 1020, 1167, 1661, 1787
Tru9I TTAA 9 cut(s) 246, 420, 611, 888, 944, 1020, 1167, 1661, 1787
TscAI CASTG 8 cut(s) 16, 131, 465, 1316, 1729, 1753, 1843, 2096
TseI GCWGC 3 cut(s) 1007, 1817, 1919
TspDTI ATGAA 4 cut(s) 460, 1416, 1578, 1908
TspGWI ACGGA 3 cut(s) 479, 1282, 1890
TspRI CASTG 8 cut(s) 16, 131, 465, 1316, 1729, 1753, 1843, 2096
XapI RAATTY 7 cut(s) 805, 940, 1246, 1420, 1466, 1566, 1929
XbaI TCTAGA 1 cut(s) 527
XceI RCATGY 2 cut(s) 87, 490
XmiI GTMKAC 4 cut(s) 33, 363, 555, 606
XmnI GAANNNNTTC 5 cut(s) 256, 326, 1410, 1434, 1803
XspI CTAG 2 cut(s) 528, 984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.