Prupe.1G028400_v2.0.a1

Sieve element occlusion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000511
Physical Location & Seq
Forward (+)
1984229 .. 1987431
3203 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G028400.1

Sequence Viewer

Length: 2058 bp
ATGGCAGGCAATGGCATAACACACAATGTGGCTACCAAGGTGGCCTCAGTAGTTACTACAGCTCAGAACCACATTGCTGGTCATGAGCTTAGCCTGTTTGCCATGTCTGACCAGAAAATCTTAGAGCAAATTTATGGGACTCATGTTCATGCTGATGAATCCTTTGACGATGATTCTCTTTTTGTCATCGTTGAGAACATCCTCAAGCGTGCAACCCAAATTGTTGACAAAATCGTGCAGGGTACCCAAGTGCATGTTGAAAACATAGAAGAGAAGACCCCCAAACCAGGCTTCAGTACACCATTGTGCACACTTAAGTCAATAGCCTCCGAGATGCAATGCAAGCCTCCAGGTGAGGAAGTTGCGCACAGCACAACCCTGGCAATACTGAACAAGCTATCAAGCTATTCATGGGAAGCAAAGGCAGTGCTGACTCTAGCAGCTTTTGCTATGGAATATGGGGAGTTCTGGCTCCTTGCCCAGCTTCGCGAATCGGACCGACTTGCCAAATCAATTGCAATCCTGAAGCGAGTCCCTGTCCTCCTCAAGCACTCAAACCAGCACAAAAGAAGACAAGCAGTGCTTGAGCTTAACAATCTGATCAAGGCTACATTGCAAGTGATTGAGTGCATCGATCAGTTCGATAAGCTTTCTAGCTACGACCCGAAAGATGTGCCGGGATTAGCAATTGCAATGGACCATATTCCAGTGGATGTGTATTGGGCTATTATGACTGTTGTTGCTTGTGCAACTAAGGTCACTATTCTCACCAGTGATGAGGTCAAGGACCATGATCTAGCCCCGTTTGCTCAAAAAATCCACTATGTCCTAAACAAGCTTAAGATCCAGCTAATAGTTTGCAGAAAACAAATTGAGGAGGCAGAGGCTTACCGGAGGATAAGGAAAACCTTCCAAACTCCTACTGAGATTATGGAGGTTTTCAAGGCCCTCATCTTTACCAAGGACAATGTCCAGCCACTCATTGATGGTTCTACTAAACAAATGGTCAAAATCGATATATTAAGGAGGAAGAATGTGCTGTTGTTCATTTCAAGCCTGGACATCTCCGATGATGACATTTCTATCCTCAAACCCATCTATGAGTTCACCAAGAAAGAGAACCAGCATAAGATTGTCTGGGTTCCAGTTGTCGAGCACTGGACCGATGACCTGCGAAAGAAGTTTGAGACCCTGAGGCTGAAAATGCCATGGTACACAGTGCAGAACCCTGCACCCATAGCCGGAATCAGGTTTATCAAGGAGGAGTGGAACTTCAAGGGTAAGCCTGCACTGGTGGTGATGAACCCACAAGGAAAGGTTGAGCATTCCAACGCTCTCCACATGATTCGGATATGGGGAGTTAAGGCCTTCCCTTTCACAAAGGCAACTGAAGAAGAACTCTCACATTCTCACAGAGATAGATGGGTGGGCAATGTAGTCCACGACATTCACCCATCTCTTCCCAATTGGATCAAAGAGGAAAAATACATCTTCTTCTATGGAGGCAAAGACAACGACTGGATTCAGCAATTCACAAAGAAAGCAAGTGCCCTCGCAAACGACCCTGTTTTCAAGGAAGCAAAGATTCACATCGAGTTGTTTTGTGTGGGGAAGGGAAGCAAAGGAGAAGATGACCATGGCATTCTAGGACACTTCTGGTCCGGCATAGAAAGCCTCTTCTTCACCAAGGGCCACAAGCAAGTCGACCCAGTCACTCAAGAAATCCAGAAGCTGCTTTCTTACAAAAACGAAAGTGGATGGGCTGTGCTCAGCAAAGGGTCTTCTGTGTTGCTGACTGGCCATGGAGTCTCAATCTTAAGGGTCATAGAGGACTTTGACAAATGGAAGGACCATGTGAAAGAGAAAGGCTTTGAGTTTTGTTTCAAAGCATACCATGAGAAGGTTCGTCTTGCAACTCGACCTTGCTGCCGCCTAGATATTCCAGGCTCTACCGGGAAGGTCCCAGACACAATGAAATGCCCAGATTGCCACCGTAGCATGGAGACTTTTATCAGTTACAAGTGCTGCCACATTGATGGCCCTAATGCACATCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SEO_C SEO_N

Protein Analysis

686

Amino Acids

77.94

Weight (kDa)

8.08

Isoelectric Point (pI)

37.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000511)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02370 FvH4_4g02370 FvH4_4g02370 FvH4_4g02430 FvH4_4g02430 FvH4_4g02460 FvH4_4g02460 FvH4_4g02460 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_6g05920
malus_domestica MD00G1111000.v1.1 MD08G1225800.v1.1 MD13G1205700.v1.1 MD13G1205800.v1.1 MD13G1205900.v1.1 MD13G1206000.v1.1 MD16G1207500.v1.1 MD16G1207600.v1.1
prunus_persica Prupe.1G028400_v2.0.a1 Prupe.1G028500_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028900_v2.0.a1 Prupe.1G029000_v2.0.a1 Prupe.1G029100_v2.0.a1
pyrus_communis pycom08g19680 pycom08g19730 pycom16g17460 pycom16g17500
rosa_chinensis RchiOBHm_Chr4g0389751 RchiOBHm_Chr4g0389771 RchiOBHm_Chr4g0389791 RchiOBHm_Chr4g0389861 RchiOBHm_Chr4g0389881 RchiOBHm_Chr4g0389901 RchiOBHm_Chr4g0412411
rosa_laevigata RLG00000008288 RLG00000009901 RLG00000009945 RLG00000009954 RLG00000009956 RLG00000009957 RLG00000009958 RLG00000019246
rosa_multiflora Rmu_co8275125.1_g000001 Rmu_sc0002083.1_g000003 Rmu_sc0002083.1_g000025 Rmu_sc0002604.1_g000016 Rmu_sc0004336.1_g000031 Rmu_sc0010423.1_g000003
rosa_roxburghii Rroxscaffold_5G00335790 Rroxscaffold_5G00335850 Rroxscaffold_5G00335970 Rroxscaffold_5G00335990
rosa_rugosa Rorug03G0325100 Rorug03G0325300 Rorug03G0325500.1 Rorug03G0326800 Rorug03G0327000 Rorug04G0104400
rosa_samantha Rh4AG029900 Rh4AG030000 Rh4AG030100 Rh4AG030200 Rh4AG030600 Rh4AG172900 Rh4BG023200 Rh4BG023900 Rh4BG024000 Rh4BG024100 Rh4BG172200 Rh4DG023300 Rh4DG023800 Rh4DG023900 Rh4DG024000 Rh4DG151600
rosa_wichuraiana Rw1G002330 Rw1G002340 Rw4G002260 Rw4G002270 Rw4G002280 Rw4G002300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 366
Acc36I ACCTGC 1 cut(s) 1179
Acc65I GGTACC 1 cut(s) 242
AccB1I GGYRCC 1 cut(s) 242
AccI GTMKAC 1 cut(s) 1704
AccII CGCG 1 cut(s) 489
AciI CCGC 1 cut(s) 1930
AclWI GGATC 2 cut(s) 838, 1478
AcoI YGGCCR 1 cut(s) 1798
AcsI RAATTY 1 cut(s) 129
AcuI CTGAAG 3 cut(s) 277, 545, 1410
AdeI CACNNNGTG 1 cut(s) 28
AfaI GTAC 3 cut(s) 244, 298, 1214
AfiI CCNNNNNNNGG 5 cut(s) 287, 1241, 1248, 1900, 1999
AflII CTTAAG 3 cut(s) 314, 839, 1816
AgsI TTSAA 6 cut(s) 260, 943, 1053, 1276, 1573, 1885
AjnI CCWGG 5 cut(s) 286, 349, 378, 1056, 1942
AjuI GAANNNNNNNTTGG 2 cut(s) 275, 307
AleI CACNNNNGTG 1 cut(s) 304
Alw21I GWGCWC 3 cut(s) 311, 1158, 1770
Alw26I GTCTC 3 cut(s) 1181, 1813, 1997
Alw44I GTGCAC 1 cut(s) 307
AlwI GGATC 2 cut(s) 838, 1478
AlwNI CAGNNNCTG 1 cut(s) 1732
AoxI GGCC 6 cut(s) 42, 945, 1365, 1690, 1798, 2038
ApaLI GTGCAC 1 cut(s) 307
ApeKI GCWGC 4 cut(s) 440, 1732, 1926, 2025
ApoI RAATTY 1 cut(s) 129
Asp700I GAANNNNTTC 1 cut(s) 908
Asp718I GGTACC 1 cut(s) 242
AspLEI GCGC 1 cut(s) 367
AsuC2I CCSGG 2 cut(s) 678, 1954
AsuHPI GGTGA 6 cut(s) 365, 760, 1099, 1309, 1442, 1675
AvaII GGWCC 7 cut(s) 496, 697, 787, 1161, 1659, 1849, 1960
AxyI CCTNAGG 1 cut(s) 1193
BaeGI GKGCMC 2 cut(s) 311, 1552
BaeI ACNNNNGTAYC 2 cut(s) 234, 267
BalI TGGCCA 1 cut(s) 1800
BanI GGYRCC 1 cut(s) 242
BbsI GAAGAC 3 cut(s) 281, 577, 1773
Bbv12I GWGCWC 3 cut(s) 311, 1158, 1770
BbvI GCAGC 4 cut(s) 452, 1719, 1913, 2012
BccI CCATC 6 cut(s) 980, 1103, 1416, 1462, 1752, 2030
BcgI CGANNNNNNTGC 4 cut(s) 655, 689, 1908, 1942
BciT130I CCWGG 5 cut(s) 288, 351, 380, 1058, 1944
BclI TGATCA 1 cut(s) 600
BcnI CCSGG 2 cut(s) 678, 1954
BcoDI GTCTC 3 cut(s) 1181, 1813, 1997
BfaI CTAG 5 cut(s) 437, 654, 797, 1646, 1934
BfmI CTRYAG 1 cut(s) 57
BfrI CTTAAG 3 cut(s) 314, 839, 1816
BfuAI ACCTGC 1 cut(s) 1179
BisI GCNGC 5 cut(s) 441, 1733, 1927, 1930, 2026
BlpI GCTNAGC 2 cut(s) 89, 1769
BlsI GCNGC 5 cut(s) 442, 1734, 1928, 1931, 2027
Bme1390I CCNGG 7 cut(s) 288, 351, 380, 678, 1058, 1944, 1954
Bme18I GGWCC 7 cut(s) 496, 697, 787, 1161, 1659, 1849, 1960
BmiI GGNNCC 4 cut(s) 244, 473, 1143, 1962
BmrFI CCNGG 7 cut(s) 288, 351, 380, 678, 1058, 1944, 1954
BmrI ACTGGG 1 cut(s) 1703
BmsI GCATC 2 cut(s) 324, 639
BmuI ACTGGG 1 cut(s) 1703
BpiI GAAGAC 3 cut(s) 281, 577, 1773
BpmI CTGGAG 1 cut(s) 333
Bpu1102I GCTNAGC 2 cut(s) 89, 1769
BpuEI CTTGAG 4 cut(s) 188, 530, 605, 1701
BpuMI CCSGG 2 cut(s) 678, 1954
Bsa29I ATCGAT 2 cut(s) 633, 1014
BsaBI GATNNNNATC 1 cut(s) 1589
BsaI GGTCTC 1 cut(s) 1181
BsaJI CCNNGG 7 cut(s) 36, 378, 960, 1208, 1636, 1686, 1801
BsaWI WCCGGW 1 cut(s) 891
Bsc4I CCNNNNNNNGG 5 cut(s) 287, 1241, 1248, 1900, 1999
Bse1I ACTGG 8 cut(s) 707, 771, 1145, 1163, 1296, 1523, 1709, 1801
Bse21I CCTNAGG 1 cut(s) 1193
Bse3DI GCAATG 6 cut(s) 16, 72, 344, 611, 699, 1438
Bse8I GATNNNNATC 1 cut(s) 1589
BseBI CCWGG 5 cut(s) 288, 351, 380, 1058, 1944
BseCI ATCGAT 2 cut(s) 633, 1014
BseDI CCNNGG 7 cut(s) 36, 378, 960, 1208, 1636, 1686, 1801
BseGI GGATG 3 cut(s) 198, 718, 1763
BseJI GATNNNNATC 1 cut(s) 1589
BseLI CCNNNNNNNGG 5 cut(s) 287, 1241, 1248, 1900, 1999
BseMI GCAATG 6 cut(s) 16, 72, 344, 611, 699, 1438
BseMII CTCAG 5 cut(s) 60, 77, 915, 1184, 1783
BseNI ACTGG 8 cut(s) 707, 771, 1145, 1163, 1296, 1523, 1709, 1801
BseRI GAGGAG 3 cut(s) 533, 890, 1277
BseSI GKGCMC 2 cut(s) 311, 1552
BseXI GCAGC 4 cut(s) 452, 1719, 1913, 2012
BseYI CCCAGC 1 cut(s) 480
BsgI GTGCAG 4 cut(s) 257, 1215, 1241, 1272
Bsh1236I CGCG 1 cut(s) 489
BshFI GGCC 6 cut(s) 44, 947, 1367, 1692, 1800, 2040
BshNI GGYRCC 1 cut(s) 242
BshVI ATCGAT 2 cut(s) 633, 1014
BsiHKAI GWGCWC 3 cut(s) 311, 1158, 1770
BsiSI CCGG 5 cut(s) 677, 892, 1242, 1662, 1953
BslFI GGGAC 3 cut(s) 151, 518, 1946
BslI CCNNNNNNNGG 5 cut(s) 287, 1241, 1248, 1900, 1999
BsmAI GTCTC 3 cut(s) 1181, 1813, 1997
BsmFI GGGAC 3 cut(s) 151, 518, 1946
BsmI GAATGC 2 cut(s) 1324, 1641
BsnI GGCC 6 cut(s) 44, 947, 1367, 1692, 1800, 2040
Bso31I GGTCTC 1 cut(s) 1181
Bsp1286I GDGCHC 4 cut(s) 311, 1158, 1552, 1770
Bsp143I GATC 5 cut(s) 600, 634, 793, 843, 1470
Bsp1720I GCTNAGC 2 cut(s) 89, 1769
Bsp19I CCATGG 3 cut(s) 1208, 1636, 1801
Bsp68I TCGCGA 1 cut(s) 489
BspACI CCGC 1 cut(s) 1930
BspANI GGCC 6 cut(s) 44, 947, 1367, 1692, 1800, 2040
BspCNI CTCAG 5 cut(s) 59, 76, 916, 1185, 1782
BspDI ATCGAT 2 cut(s) 633, 1014
BspFNI CGCG 1 cut(s) 489
BspHI TCATGA 1 cut(s) 82
BspLI GGNNCC 4 cut(s) 244, 473, 1143, 1962
BspMI ACCTGC 1 cut(s) 1179
BspPI GGATC 2 cut(s) 838, 1478
BspT107I GGYRCC 1 cut(s) 242
BspTI CTTAAG 3 cut(s) 314, 839, 1816
BspTNI GGTCTC 1 cut(s) 1181
BsrDI GCAATG 6 cut(s) 16, 72, 344, 611, 699, 1438
BsrI ACTGG 8 cut(s) 707, 771, 1145, 1163, 1296, 1523, 1709, 1801
BssECI CCNNGG 7 cut(s) 36, 378, 960, 1208, 1636, 1686, 1801
BssMI GATC 5 cut(s) 600, 634, 793, 843, 1470
BssT1I CCWWGG 6 cut(s) 36, 960, 1208, 1636, 1686, 1801
Bst2UI CCWGG 5 cut(s) 288, 351, 380, 1058, 1944
Bst4CI ACNGT 3 cut(s) 736, 1219, 1994
Bst6I CTCTTC 3 cut(s) 264, 1464, 1682
BstAFI CTTAAG 3 cut(s) 314, 839, 1816
BstAPI GCANNNNNTGC 1 cut(s) 446
BstC8I GCNNGC 4 cut(s) 7, 210, 344, 1287
BstDEI CTNAG 8 cut(s) 46, 63, 89, 121, 753, 924, 1193, 1769
BstDSI CCRYGG 3 cut(s) 1208, 1636, 1801
BstF5I GGATG 3 cut(s) 198, 718, 1763
BstFNI CGCG 1 cut(s) 489
BstHHI GCGC 1 cut(s) 367
BstKTI GATC 5 cut(s) 603, 637, 796, 846, 1473
BstMAI GTCTC 3 cut(s) 1181, 1813, 1997
BstMBI GATC 5 cut(s) 600, 634, 793, 843, 1470
BstMWI GCNNNNNNNGC 8 cut(s) 343, 446, 806, 1204, 1238, 1671, 1986, 1995
BstNI CCWGG 5 cut(s) 288, 351, 380, 1058, 1944
BstNSI RCATGY 1 cut(s) 257
BstSCI CCNGG 7 cut(s) 286, 349, 378, 676, 1056, 1942, 1952
BstSFI CTRYAG 1 cut(s) 57
BstSLI GKGCMC 2 cut(s) 311, 1552
BstUI CGCG 1 cut(s) 489
BstV1I GCAGC 4 cut(s) 452, 1719, 1913, 2012
BstV2I GAAGAC 3 cut(s) 281, 577, 1773
BstX2I RGATCY 1 cut(s) 843
BstXI CCANNNNNNTGG 2 cut(s) 77, 2036
BstYI RGATCY 1 cut(s) 843
Bsu15I ATCGAT 2 cut(s) 633, 1014
Bsu36I CCTNAGG 1 cut(s) 1193
BsuRI GGCC 6 cut(s) 44, 947, 1367, 1692, 1800, 2040
BsuTUI ATCGAT 2 cut(s) 633, 1014
BtgI CCRYGG 3 cut(s) 1208, 1636, 1801
BtsCI GGATG 3 cut(s) 198, 718, 1763
BtsI GCAGTG 2 cut(s) 432, 585
BtsIMutI CAGTG 7 cut(s) 432, 585, 714, 778, 1156, 1224, 1289
BtuMI TCGCGA 1 cut(s) 489
BveI ACCTGC 1 cut(s) 1179
Cac8I GCNNGC 4 cut(s) 7, 210, 344, 1287
CaiI CAGNNNCTG 1 cut(s) 1732
CciI TCATGA 1 cut(s) 82
CfoI GCGC 1 cut(s) 367
ClaI ATCGAT 2 cut(s) 633, 1014
CpoI CGGWCCG 1 cut(s) 496
Csp6I GTAC 3 cut(s) 243, 297, 1213
CspI CGGWCCG 1 cut(s) 496
CviQI GTAC 3 cut(s) 243, 297, 1213
DdeI CTNAG 8 cut(s) 46, 63, 89, 121, 753, 924, 1193, 1769
DpnI GATC 5 cut(s) 602, 636, 795, 845, 1472
DpnII GATC 5 cut(s) 600, 634, 793, 843, 1470
DraIII CACNNNGTG 1 cut(s) 28
EaeI YGGCCR 1 cut(s) 1798
Eam1104I CTCTTC 3 cut(s) 264, 1464, 1682
EarI CTCTTC 3 cut(s) 264, 1464, 1682
Eco130I CCWWGG 6 cut(s) 36, 960, 1208, 1636, 1686, 1801
Eco147I AGGCCT 1 cut(s) 1367
Eco31I GGTCTC 1 cut(s) 1181
Eco47I GGWCC 7 cut(s) 496, 697, 787, 1161, 1659, 1849, 1960
Eco57I CTGAAG 3 cut(s) 277, 545, 1410
Eco81I CCTNAGG 1 cut(s) 1193
EcoO109I RGGNCCY 2 cut(s) 946, 1960
EcoRII CCWGG 5 cut(s) 286, 349, 378, 1056, 1942
EcoT14I CCWWGG 6 cut(s) 36, 960, 1208, 1636, 1686, 1801
ErhI CCWWGG 6 cut(s) 36, 960, 1208, 1636, 1686, 1801
FalI AAGNNNNNCTT 2 cut(s) 567, 599
FaqI GGGAC 3 cut(s) 151, 518, 1946
FbaI TGATCA 1 cut(s) 600
FblI GTMKAC 1 cut(s) 1704
Fnu4HI GCNGC 5 cut(s) 441, 1733, 1927, 1930, 2026
FokI GGATG 3 cut(s) 185, 725, 1770
Fsp4HI GCNGC 5 cut(s) 441, 1733, 1927, 1930, 2026
FspBI CTAG 5 cut(s) 437, 654, 797, 1646, 1934
FspI TGCGCA 1 cut(s) 366
GlaI GCGC 1 cut(s) 366
GluI GCNGC 5 cut(s) 441, 1733, 1927, 1930, 2026
GsaI CCCAGC 1 cut(s) 484
GsuI CTGGAG 1 cut(s) 333
HaeIII GGCC 6 cut(s) 44, 947, 1367, 1692, 1800, 2040
HapII CCGG 5 cut(s) 677, 892, 1242, 1662, 1953
HhaI GCGC 1 cut(s) 367
Hin6I GCGC 1 cut(s) 365
HinP1I GCGC 1 cut(s) 365
HincII GTYRAC 2 cut(s) 226, 1705
HindII GTYRAC 2 cut(s) 226, 1705
HindIII AAGCTT 2 cut(s) 647, 836
HpaII CCGG 5 cut(s) 677, 892, 1242, 1662, 1953
HphI GGTGA 6 cut(s) 365, 760, 1099, 1309, 1442, 1675
Hpy166II GTNNAC 7 cut(s) 226, 299, 309, 1107, 1215, 1441, 1705
Hpy188I TCNGA 7 cut(s) 66, 109, 331, 496, 600, 1069, 1350
Hpy188III TCNNGA 5 cut(s) 83, 488, 523, 1718, 1726
Hpy8I GTNNAC 7 cut(s) 226, 299, 309, 1107, 1215, 1441, 1705
HpyAV CCTTC 6 cut(s) 919, 1378, 1606, 1840, 1894, 1951
HpyCH4III ACNGT 3 cut(s) 736, 1219, 1994
HpyF10VI GCNNNNNNNGC 8 cut(s) 343, 446, 806, 1204, 1238, 1671, 1986, 1995
HpyF3I CTNAG 8 cut(s) 46, 63, 89, 121, 753, 924, 1193, 1769
HspAI GCGC 1 cut(s) 365
KpnI GGTACC 1 cut(s) 246
Ksp22I TGATCA 1 cut(s) 600
Kzo9I GATC 5 cut(s) 600, 634, 793, 843, 1470
LmnI GCTCC 1 cut(s) 477
Lsp1109I GCAGC 4 cut(s) 452, 1719, 1913, 2012
LweI GCATC 2 cut(s) 324, 639
MaeI CTAG 5 cut(s) 437, 654, 797, 1646, 1934
MaeIII GTNAC 4 cut(s) 52, 757, 1711, 2015
MalI GATC 5 cut(s) 602, 636, 795, 845, 1472
MboI GATC 5 cut(s) 600, 634, 793, 843, 1470
MfeI CAATTG 3 cut(s) 513, 687, 1465
MflI RGATCY 1 cut(s) 843
MhlI GDGCHC 4 cut(s) 311, 1158, 1552, 1770
MlsI TGGCCA 1 cut(s) 1800
MluCI AATT 7 cut(s) 129, 219, 513, 687, 870, 1465, 1529
MluNI TGGCCA 1 cut(s) 1800
MlyI GAGTC 4 cut(s) 133, 427, 540, 1815
MmeI TCCRAC 1 cut(s) 1353
Mox20I TGGCCA 1 cut(s) 1800
MroXI GAANNNNTTC 1 cut(s) 908
MscI TGGCCA 1 cut(s) 1800
MseI TTAA 7 cut(s) 315, 591, 840, 1022, 1362, 1817, 2056
MslI CAYNNNNRTG 4 cut(s) 147, 153, 304, 2034
Msp20I TGGCCA 1 cut(s) 1800
MspCI CTTAAG 3 cut(s) 314, 839, 1816
MspI CCGG 5 cut(s) 677, 892, 1242, 1662, 1953
MspR9I CCNGG 7 cut(s) 288, 351, 380, 678, 1058, 1944, 1954
MunI CAATTG 3 cut(s) 513, 687, 1465
Mva1269I GAATGC 2 cut(s) 1324, 1641
MvaI CCWGG 5 cut(s) 288, 351, 380, 1058, 1944
MvnI CGCG 1 cut(s) 489
MwoI GCNNNNNNNGC 8 cut(s) 343, 446, 806, 1204, 1238, 1671, 1986, 1995
NciI CCSGG 2 cut(s) 678, 1954
NcoI CCATGG 3 cut(s) 1208, 1636, 1801
NdeII GATC 5 cut(s) 600, 634, 793, 843, 1470
NlaIV GGNNCC 4 cut(s) 244, 473, 1143, 1962
NmuCI GTSAC 2 cut(s) 757, 1711
NruI TCGCGA 1 cut(s) 489
NsbI TGCGCA 1 cut(s) 366
NspI RCATGY 1 cut(s) 257
OliI CACNNNNGTG 1 cut(s) 304
PagI TCATGA 1 cut(s) 82
PceI AGGCCT 1 cut(s) 1367
PcsI WCGNNNNNNNCGW 1 cut(s) 639
PctI GAATGC 2 cut(s) 1324, 1641
PdmI GAANNNNTTC 1 cut(s) 908
PfeI GAWTC 7 cut(s) 158, 173, 491, 1245, 1345, 1522, 1585
PflFI GACNNNGTC 2 cut(s) 968, 1709
PkrI GCNGC 5 cut(s) 442, 1734, 1928, 1931, 2027
PleI GAGTC 4 cut(s) 133, 427, 539, 1814
PpsI GAGTC 4 cut(s) 133, 427, 539, 1814
PpuMI RGGWCCY 1 cut(s) 1960
Psp5II RGGWCCY 1 cut(s) 1960
Psp6I CCWGG 5 cut(s) 286, 349, 378, 1056, 1942
PspFI CCCAGC 1 cut(s) 480
PspGI CCWGG 5 cut(s) 286, 349, 378, 1056, 1942
PspN4I GGNNCC 4 cut(s) 244, 473, 1143, 1962
PspPPI RGGWCCY 1 cut(s) 1960
PstNI CAGNNNCTG 1 cut(s) 1732
PsuI RGATCY 1 cut(s) 843
PsyI GACNNNGTC 2 cut(s) 968, 1709
RruI TCGCGA 1 cut(s) 489
RsaI GTAC 3 cut(s) 244, 298, 1214
RsaNI GTAC 3 cut(s) 243, 297, 1213
RseI CAYNNNNRTG 4 cut(s) 147, 153, 304, 2034
Rsr2I CGGWCCG 1 cut(s) 496
RsrII CGGWCCG 1 cut(s) 496
SalI GTCGAC 1 cut(s) 1703
SaqAI TTAA 7 cut(s) 315, 591, 840, 1022, 1362, 1817, 2056
SatI GCNGC 5 cut(s) 441, 1733, 1927, 1930, 2026
Sau3AI GATC 5 cut(s) 600, 634, 793, 843, 1470
SchI GAGTC 4 cut(s) 133, 427, 540, 1815
ScrFI CCNGG 7 cut(s) 288, 351, 380, 678, 1058, 1944, 1954
SduI GDGCHC 4 cut(s) 311, 1158, 1552, 1770
SfaNI GCATC 2 cut(s) 324, 639
SfcI CTRYAG 1 cut(s) 57
SinI GGWCC 7 cut(s) 496, 697, 787, 1161, 1659, 1849, 1960
SmiMI CAYNNNNRTG 4 cut(s) 147, 153, 304, 2034
SmlI CTYRAG 7 cut(s) 203, 314, 545, 584, 839, 1716, 1816
SmoI CTYRAG 7 cut(s) 203, 314, 545, 584, 839, 1716, 1816
Sse9I AATT 7 cut(s) 129, 219, 513, 687, 870, 1465, 1529
SseBI AGGCCT 1 cut(s) 1367
SsiI CCGC 1 cut(s) 1930
SspMI CTAG 5 cut(s) 437, 654, 797, 1646, 1934
StuI AGGCCT 1 cut(s) 1367
StyD4I CCNGG 7 cut(s) 286, 349, 378, 676, 1056, 1942, 1952
StyI CCWWGG 6 cut(s) 36, 960, 1208, 1636, 1686, 1801
TaaI ACNGT 3 cut(s) 736, 1219, 1994
TaqI TCGA 7 cut(s) 633, 642, 1014, 1152, 1593, 1704, 1918
TaqII GACCGA 2 cut(s) 513, 1178
TasI AATT 7 cut(s) 129, 219, 513, 687, 870, 1465, 1529
TatI WGTACW 1 cut(s) 296
TauI GCSGC 1 cut(s) 1932
TfiI GAWTC 7 cut(s) 158, 173, 491, 1245, 1345, 1522, 1585
Tru1I TTAA 7 cut(s) 315, 591, 840, 1022, 1362, 1817, 2056
Tru9I TTAA 7 cut(s) 315, 591, 840, 1022, 1362, 1817, 2056
TscAI CASTG 7 cut(s) 432, 585, 714, 778, 1163, 1224, 1296
TseFI GTSAC 2 cut(s) 757, 1711
TseI GCWGC 4 cut(s) 440, 1732, 1926, 2025
Tsp45I GTSAC 2 cut(s) 757, 1711
TspDTI ATGAA 6 cut(s) 137, 171, 399, 1036, 1316, 1988
TspRI CASTG 7 cut(s) 432, 585, 714, 778, 1163, 1224, 1296
Tth111I GACNNNGTC 2 cut(s) 968, 1709
Vha464I CTTAAG 3 cut(s) 314, 839, 1816
VneI GTGCAC 1 cut(s) 307
VpaK11BI GGWCC 7 cut(s) 496, 697, 787, 1161, 1659, 1849, 1960
XapI RAATTY 1 cut(s) 129
XceI RCATGY 1 cut(s) 257
XmiI GTMKAC 1 cut(s) 1704
XmnI GAANNNNTTC 1 cut(s) 908
XspI CTAG 5 cut(s) 437, 654, 797, 1646, 1934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.