Rmu_sc0002604.1_g000016

Sieve element occlusion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002604.1
OG0000511
Physical Location & Seq
Reverse (-)
55018 .. 59981
4964 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002604.1_g000016.1.cds

Sequence Viewer

Length: 2295 bp
atgctaggcctagcattcaacgtggctaacaagatagccgcagcagtccacgctcctcacaaaaccattgatggggagttcagcctgtttgccatgcctgacaaacagatcttgcaggagatttacacgcctcatgtccatgctgatgagaccttggatgatgattctcttttcatcattgttgagaatatcctcaagcatgcaacccaaaatgttgatgaaatagtgcagggtatccaagtgcatgtggacaacatagaggagaaaaaccccaaagccagcttcagcgtaccattgtgcacgctaaagggaatctcctacgagatgcaatgcaagcctcctggtgacgaaatcgcccacaacacaacagtggcaatactcaaaaagctctcaaagtattcatgggaagcaaaggcatcactgaccctagctgcttttgctatggaatatggtgaattctggctccttgcgcagcttcgcgaatcaaaccaccttgccaaatcaattgcaatcctcaaacgagtccctgttctcctcaagccaacggagttgcaaaagcgcaggcaatcaattcttcagcttaacaatctgatcaaggccacactacaagtgatcgaatgcattgaccagttcaataagtattcccgttatctcccaaaagaagtccctggtttgtcgatagcatcggaacatattccggttgatgtctattgggctatcatcactgttgttgcttgtgctactaagatcactatactaactagtgatgaggacaaggagtttgatctagccccctattctcaaaaaatccactatgtccttaacaagctaacgattcaactgagagattgcaaaacatatattgaggaggaagagacttacataaggatcaagaaattgttccgaacgcctactgaaattatggaggttttcaagggattattatttacaaaggataatgtccagccactcgtcgatggttcaactaagcaaacggttaacatcgacatcctatggaggaagaatgtgctattgtttatttccagtctagacattacggatgacgacatttcgattctaaaaccgatccacgagttcacaaagatagacaatcagtataacattgtctggataccaattgtggagcaatggactgatgatctgagaaagaagttcgatatcctaaagaacaagatgccgtggtttacggtgcagtaccctggacctatagcaggcatcaagtacatcaagaaggactggaacttcaagggtaagcctacgatggtggtgatgaactcgtatggaaaggtcgaacaccctaacgctgtccacatggttcgggtatggggagaaatggccttccctttcacagagacaagagaagcagaactgtcacattctgatggagaaaaatggttttcctccgttgttaacggaattcacccatctctgcccgctaggatcaaagaaaataagtacatcttcttctatggcggtaaagacaacctatggattcagaattttaaaaataaagcaactgcccttgcaaaagatccaatcttcaaggaagcaaagatagagttggtatgcgttggaaaagacagcaaaggagaagatgaccatggtgttctaggctgcttctggaccggtgtagaaagcctgttcttcaccataggccaatggcaggtcgactcggtcagtgaagaaatccagaagcttctctcttacaaaaacgaaagtggatgggcagtgctttgcaaagggtcgactgtgttggtcacggctcatggtgtcttgatgttgaaggtggtagaggactttcagaaatggaaggaccctgtcaaggagaaggggtttgagttttgtttcacaacctactatgggacgattattgatgatagccgtcaaccttgctgccgtgtggatatttcggggtctaacggaaaggttccagattcgatgaagtgccctgattgccaccgtagtatggagactattatcagttacaatggtcggcactggcaaggtcctgagtgcggcaaggctttttcttggtcgctcgaagaggtaggcacagagtgcagacgggttctgcgttggatttgtgttttccgggttgggatctggcacacatttgcttaccagagtgcgctaaaggttcagcgatctctgccggatttgatgttacagtggatcagccagccaccagaggggcagaatcgatggatggtggtagaagaaattgggccaatgcgggctagggctgttgccctccttgcttggggttgggcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SEO_C SEO_N

Protein Analysis

764

Amino Acids

87.38

Weight (kDa)

6.6

Isoelectric Point (pI)

40.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000511)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02370 FvH4_4g02370 FvH4_4g02370 FvH4_4g02430 FvH4_4g02430 FvH4_4g02460 FvH4_4g02460 FvH4_4g02460 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_6g05920
malus_domestica MD00G1111000.v1.1 MD08G1225800.v1.1 MD13G1205700.v1.1 MD13G1205800.v1.1 MD13G1205900.v1.1 MD13G1206000.v1.1 MD16G1207500.v1.1 MD16G1207600.v1.1
prunus_persica Prupe.1G028400_v2.0.a1 Prupe.1G028500_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028900_v2.0.a1 Prupe.1G029000_v2.0.a1 Prupe.1G029100_v2.0.a1
pyrus_communis pycom08g19680 pycom08g19730 pycom16g17460 pycom16g17500
rosa_chinensis RchiOBHm_Chr4g0389751 RchiOBHm_Chr4g0389771 RchiOBHm_Chr4g0389791 RchiOBHm_Chr4g0389861 RchiOBHm_Chr4g0389881 RchiOBHm_Chr4g0389901 RchiOBHm_Chr4g0412411
rosa_laevigata RLG00000008288 RLG00000009901 RLG00000009945 RLG00000009954 RLG00000009956 RLG00000009957 RLG00000009958 RLG00000019246
rosa_multiflora Rmu_co8275125.1_g000001 Rmu_sc0002083.1_g000003 Rmu_sc0002083.1_g000025 Rmu_sc0002604.1_g000016 Rmu_sc0004336.1_g000031 Rmu_sc0010423.1_g000003
rosa_roxburghii Rroxscaffold_5G00335790 Rroxscaffold_5G00335850 Rroxscaffold_5G00335970 Rroxscaffold_5G00335990
rosa_rugosa Rorug03G0325100 Rorug03G0325300 Rorug03G0325500.1 Rorug03G0326800 Rorug03G0327000 Rorug04G0104400
rosa_samantha Rh4AG029900 Rh4AG030000 Rh4AG030100 Rh4AG030200 Rh4AG030600 Rh4AG172900 Rh4BG023200 Rh4BG023900 Rh4BG024000 Rh4BG024100 Rh4BG172200 Rh4DG023300 Rh4DG023800 Rh4DG023900 Rh4DG024000 Rh4DG151600
rosa_wichuraiana Rw1G002330 Rw1G002340 Rw4G002260 Rw4G002270 Rw4G002280 Rw4G002300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 471
Acc36I ACCTGC 1 cut(s) 1675
AccI GTMKAC 2 cut(s) 1689, 1766
AccII CGCG 1 cut(s) 480
AciI CCGC 5 cut(s) 39, 1455, 1494, 2037, 2254
AclWI GGATC 6 cut(s) 896, 1081, 1469, 1547, 2129, 2201
AcsI RAATTY 3 cut(s) 455, 1437, 1519
AcuI CTGAAG 2 cut(s) 268, 560
AdeI CACNNNGTG 1 cut(s) 2079
AfaI GTAC 4 cut(s) 291, 1217, 1244, 1478
AfiI CCNNNNNNNGG 9 cut(s) 72, 1232, 1684, 1843, 1881, 1987, 2036, 2210, 2281
AgeI ACCGGT 1 cut(s) 1646
AgsI TTSAA 8 cut(s) 19, 634, 839, 934, 984, 1267, 1564, 1804
AhlI ACTAGT 1 cut(s) 761
AjnI CCWGG 3 cut(s) 340, 667, 1219
AjuI GAANNNNNNNTTGG 2 cut(s) 266, 298
AleI CACNNNNGTG 1 cut(s) 368
AluBI AGCT 7 cut(s) 282, 388, 431, 475, 580, 829, 1717
AluI AGCT 7 cut(s) 282, 388, 431, 475, 580, 829, 1717
Alw21I GWGCWC 1 cut(s) 302
Alw26I GTCTC 4 cut(s) 143, 869, 1367, 1985
Alw44I GTGCAC 1 cut(s) 298
AlwI GGATC 6 cut(s) 896, 1081, 1469, 1547, 2129, 2201
AoxI GGCC 6 cut(s) 7, 597, 1356, 1675, 2246, 2289
ApaLI GTGCAC 1 cut(s) 298
ApeKI GCWGC 5 cut(s) 41, 431, 472, 1635, 1914
ApoI RAATTY 3 cut(s) 455, 1437, 1519
ArsI GACNNNNNNTTYG 2 cut(s) 764, 796
AsiGI ACCGGT 1 cut(s) 1646
Asp700I GAANNNNTTC 2 cut(s) 693, 899
AspLEI GCGC 3 cut(s) 472, 561, 2152
AspS9I GGNCC 6 cut(s) 1223, 1644, 1834, 2027, 2246, 2289
AsuC2I CCSGG 1 cut(s) 2114
AsuHPI GGTGA 5 cut(s) 356, 464, 1300, 1433, 1660
AvaII GGWCC 4 cut(s) 1223, 1644, 1834, 2027
BaeGI GKGCMC 2 cut(s) 302, 1970
BarI GAAGNNNNNNTAC 2 cut(s) 1469, 1501
BauI CACGAG 1 cut(s) 1091
Bbv12I GWGCWC 1 cut(s) 302
BbvI GCAGC 5 cut(s) 53, 418, 484, 1622, 1901
BccI CCATC 8 cut(s) 65, 971, 1276, 1397, 1453, 1737, 2217, 2221
BceAI ACGGC 4 cut(s) 1183, 1797, 1887, 1902
BciT130I CCWGG 3 cut(s) 342, 669, 1221
BciVI GTATCC 2 cut(s) 245, 1125
BclI TGATCA 1 cut(s) 591
BcnI CCSGG 1 cut(s) 2114
BcoDI GTCTC 4 cut(s) 143, 869, 1367, 1985
BcuI ACTAGT 1 cut(s) 761
BfmI CTRYAG 1 cut(s) 1227
BfuAI ACCTGC 1 cut(s) 1675
BfuI GTATCC 2 cut(s) 245, 1125
BglII AGATCT 1 cut(s) 108
BisI GCNGC 7 cut(s) 39, 42, 432, 473, 1636, 1915, 2038
BlsI GCNGC 7 cut(s) 40, 43, 433, 474, 1637, 1916, 2039
Bme1390I CCNGG 4 cut(s) 342, 669, 1221, 2114
Bme18I GGWCC 4 cut(s) 1223, 1644, 1834, 2027
BmgT120I GGNCC 6 cut(s) 1223, 1644, 1834, 2027, 2246, 2289
BmiI GGNNCC 3 cut(s) 464, 1836, 1950
BmrFI CCNGG 4 cut(s) 342, 669, 1221, 2114
BmsI GCATC 5 cut(s) 315, 425, 692, 1185, 1245
BpuEI CTTGAG 2 cut(s) 179, 521
BpuMI CCSGG 1 cut(s) 2114
Bsa29I ATCGAT 1 cut(s) 2221
BsaI GGTCTC 1 cut(s) 143
BsaJI CCNNGG 5 cut(s) 153, 667, 1199, 1219, 1621
BsaWI WCCGGW 2 cut(s) 697, 1646
BsaXI ACNNNNNCTCC 2 cut(s) 1838, 1868
Bsc4I CCNNNNNNNGG 9 cut(s) 72, 1232, 1684, 1843, 1881, 1987, 2036, 2210, 2281
Bse118I RCCGGY 1 cut(s) 1646
Bse1I ACTGG 4 cut(s) 628, 1044, 1262, 2024
Bse3DI GCAATG 2 cut(s) 335, 1154
BseBI CCWGG 3 cut(s) 342, 669, 1221
BseCI ATCGAT 1 cut(s) 2221
BseDI CCNNGG 5 cut(s) 153, 667, 1199, 1219, 1621
BseGI GGATG 5 cut(s) 163, 1008, 1066, 1748, 2232
BseLI CCNNNNNNNGG 9 cut(s) 72, 1232, 1684, 1843, 1881, 1987, 2036, 2210, 2281
BseMI GCAATG 2 cut(s) 335, 1154
BseMII CTCAG 3 cut(s) 833, 1154, 2022
BseNI ACTGG 4 cut(s) 628, 1044, 1262, 2024
BseRI GAGGAG 4 cut(s) 45, 275, 524, 881
BseSI GKGCMC 2 cut(s) 302, 1970
BseXI GCAGC 5 cut(s) 53, 418, 484, 1622, 1901
BsgI GTGCAG 3 cut(s) 248, 1232, 2101
Bsh1236I CGCG 1 cut(s) 480
BshFI GGCC 6 cut(s) 9, 599, 1358, 1677, 2248, 2291
BshTI ACCGGT 1 cut(s) 1646
BshVI ATCGAT 1 cut(s) 2221
BsiHKAI GWGCWC 1 cut(s) 302
BsiSI CCGG 4 cut(s) 698, 1647, 2113, 2174
BslFI GGGAC 3 cut(s) 509, 650, 1897
BslI CCNNNNNNNGG 9 cut(s) 72, 1232, 1684, 1843, 1881, 1987, 2036, 2210, 2281
BsmAI GTCTC 4 cut(s) 143, 869, 1367, 1985
BsmFI GGGAC 3 cut(s) 509, 650, 1897
BsmI GAATGC 2 cut(s) 14, 623
BsnI GGCC 6 cut(s) 9, 599, 1358, 1677, 2248, 2291
Bso31I GGTCTC 1 cut(s) 143
Bsp1286I GDGCHC 2 cut(s) 302, 1970
Bsp19I CCATGG 1 cut(s) 1621
Bsp68I TCGCGA 1 cut(s) 480
BspACI CCGC 5 cut(s) 39, 1455, 1494, 2037, 2254
BspANI GGCC 6 cut(s) 9, 599, 1358, 1677, 2248, 2291
BspCNI CTCAG 3 cut(s) 834, 1155, 2023
BspDI ATCGAT 1 cut(s) 2221
BspFNI CGCG 1 cut(s) 480
BspLI GGNNCC 3 cut(s) 464, 1836, 1950
BspMI ACCTGC 1 cut(s) 1675
BspPI GGATC 6 cut(s) 896, 1081, 1469, 1547, 2129, 2201
BspTNI GGTCTC 1 cut(s) 143
BsrDI GCAATG 2 cut(s) 335, 1154
BsrFI RCCGGY 1 cut(s) 1646
BsrI ACTGG 4 cut(s) 628, 1044, 1262, 2024
BssAI RCCGGY 1 cut(s) 1646
BssECI CCNNGG 5 cut(s) 153, 667, 1199, 1219, 1621
BssSI CACGAG 1 cut(s) 1091
BssT1I CCWWGG 2 cut(s) 153, 1621
Bst2BI CACGAG 1 cut(s) 1091
Bst2UI CCWGG 3 cut(s) 342, 669, 1221
Bst4CI ACNGT 8 cut(s) 370, 727, 997, 1210, 1392, 1771, 1982, 2190
Bst6I CTCTTC 2 cut(s) 867, 2058
BstAPI GCANNNNNTGC 1 cut(s) 2079
BstC8I GCNNGC 9 cut(s) 201, 280, 302, 335, 563, 1234, 1455, 2201, 2256
BstDEI CTNAG 5 cut(s) 744, 842, 987, 1163, 2031
BstDSI CCRYGG 2 cut(s) 1199, 1621
BstENI CCTNNNNNAGG 1 cut(s) 1230
BstF5I GGATG 5 cut(s) 163, 1008, 1066, 1748, 2232
BstFNI CGCG 1 cut(s) 480
BstHHI GCGC 3 cut(s) 472, 561, 2152
BstMAI GTCTC 4 cut(s) 143, 869, 1367, 1985
BstMWI GCNNNNNNNGC 8 cut(s) 50, 334, 437, 469, 1974, 2079, 2170, 2276
BstNI CCWGG 3 cut(s) 342, 669, 1221
BstNSI RCATGY 2 cut(s) 203, 248
BstSCI CCNGG 4 cut(s) 340, 667, 1219, 2112
BstSFI CTRYAG 1 cut(s) 1227
BstSLI GKGCMC 2 cut(s) 302, 1970
BstUI CGCG 1 cut(s) 480
BstV1I GCAGC 5 cut(s) 53, 418, 484, 1622, 1901
BstX2I RGATCY 3 cut(s) 108, 1552, 2121
BstYI RGATCY 3 cut(s) 108, 1552, 2121
Bsu15I ATCGAT 1 cut(s) 2221
BsuI GTATCC 2 cut(s) 245, 1125
BsuRI GGCC 6 cut(s) 9, 599, 1358, 1677, 2248, 2291
BsuTUI ATCGAT 1 cut(s) 2221
BtgI CCRYGG 2 cut(s) 1199, 1621
BtsCI GGATG 5 cut(s) 163, 1008, 1066, 1748, 2232
BtsI GCAGTG 1 cut(s) 1755
BtsIMutI CAGTG 7 cut(s) 375, 419, 723, 1705, 1755, 2017, 2195
BtuMI TCGCGA 1 cut(s) 480
BveI ACCTGC 1 cut(s) 1675
Cac8I GCNNGC 9 cut(s) 201, 280, 302, 335, 563, 1234, 1455, 2201, 2256
CfoI GCGC 3 cut(s) 472, 561, 2152
Cfr10I RCCGGY 1 cut(s) 1646
Cfr13I GGNCC 6 cut(s) 1223, 1644, 1834, 2027, 2246, 2289
ClaI ATCGAT 1 cut(s) 2221
Csp6I GTAC 4 cut(s) 290, 1216, 1243, 1477
CspAI ACCGGT 1 cut(s) 1646
CviAII CATG 9 cut(s) 94, 134, 140, 200, 245, 402, 1333, 1622, 1787
CviQI GTAC 4 cut(s) 290, 1216, 1243, 1477
DdeI CTNAG 5 cut(s) 744, 842, 987, 1163, 2031
DraI TTTAAA 1 cut(s) 1525
DraIII CACNNNGTG 1 cut(s) 2079
Eam1104I CTCTTC 2 cut(s) 867, 2058
EarI CTCTTC 2 cut(s) 867, 2058
Eco130I CCWWGG 2 cut(s) 153, 1621
Eco147I AGGCCT 1 cut(s) 9
Eco31I GGTCTC 1 cut(s) 143
Eco32I GATATC 1 cut(s) 1180
Eco47I GGWCC 4 cut(s) 1223, 1644, 1834, 2027
Eco57I CTGAAG 2 cut(s) 268, 560
EcoNI CCTNNNNNAGG 1 cut(s) 1230
EcoO109I RGGNCCY 2 cut(s) 1834, 2027
EcoRI GAATTC 2 cut(s) 455, 1437
EcoRII CCWGG 3 cut(s) 340, 667, 1219
EcoRV GATATC 1 cut(s) 1180
EcoT14I CCWWGG 2 cut(s) 153, 1621
EcoT22I ATGCAT 1 cut(s) 623
ErhI CCWWGG 2 cut(s) 153, 1621
FaeI CATG 9 cut(s) 97, 137, 143, 203, 248, 405, 1336, 1625, 1790
FalI AAGNNNNNCTT 2 cut(s) 1466, 1498
FaqI GGGAC 3 cut(s) 509, 650, 1897
FatI CATG 9 cut(s) 93, 133, 139, 199, 244, 401, 1332, 1621, 1786
FauI CCCGC 2 cut(s) 1462, 2247
FbaI TGATCA 1 cut(s) 591
FblI GTMKAC 2 cut(s) 1689, 1766
Fnu4HI GCNGC 7 cut(s) 39, 42, 432, 473, 1636, 1915, 2038
FokI GGATG 5 cut(s) 170, 995, 1073, 1755, 2239
Fsp4HI GCNGC 7 cut(s) 39, 42, 432, 473, 1636, 1915, 2038
FspI TGCGCA 1 cut(s) 471
GlaI GCGC 3 cut(s) 471, 560, 2151
GluI GCNGC 7 cut(s) 39, 42, 432, 473, 1636, 1915, 2038
HaeIII GGCC 6 cut(s) 9, 599, 1358, 1677, 2248, 2291
HapII CCGG 4 cut(s) 698, 1647, 2113, 2174
HhaI GCGC 3 cut(s) 472, 561, 2152
Hin1II CATG 9 cut(s) 97, 137, 143, 203, 248, 405, 1336, 1625, 1790
Hin6I GCGC 3 cut(s) 470, 559, 2150
HinP1I GCGC 3 cut(s) 470, 559, 2150
HincII GTYRAC 5 cut(s) 1000, 1432, 1690, 1767, 1907
HindII GTYRAC 5 cut(s) 1000, 1432, 1690, 1767, 1907
HindIII AAGCTT 1 cut(s) 1715
HpaI GTTAAC 2 cut(s) 1000, 1432
HpaII CCGG 4 cut(s) 698, 1647, 2113, 2174
HphI GGTGA 5 cut(s) 356, 464, 1300, 1433, 1660
Hpy188I TCNGA 7 cut(s) 591, 688, 905, 1164, 1402, 1518, 1824
Hpy99I CGWCG 1 cut(s) 977
HpyAV CCTTC 5 cut(s) 1246, 1369, 1798, 1825, 1843
HpyCH4III ACNGT 8 cut(s) 370, 727, 997, 1210, 1392, 1771, 1982, 2190
HpyCH4IV ACGT 1 cut(s) 21
HpyF10VI GCNNNNNNNGC 8 cut(s) 50, 334, 437, 469, 1974, 2079, 2170, 2276
HpyF3I CTNAG 5 cut(s) 744, 842, 987, 1163, 2031
HpySE526I ACGT 1 cut(s) 21
Hsp92II CATG 9 cut(s) 97, 137, 143, 203, 248, 405, 1336, 1625, 1790
HspAI GCGC 3 cut(s) 470, 559, 2150
Ksp22I TGATCA 1 cut(s) 591
KspAI GTTAAC 2 cut(s) 1000, 1432
LmnI GCTCC 3 cut(s) 58, 468, 1144
Lsp1109I GCAGC 5 cut(s) 53, 418, 484, 1622, 1901
LweI GCATC 5 cut(s) 315, 425, 692, 1185, 1245
MaeII ACGT 1 cut(s) 21
MaeIII GTNAC 5 cut(s) 344, 1392, 1777, 2003, 2184
MfeI CAATTG 2 cut(s) 504, 1137
MflI RGATCY 3 cut(s) 108, 1552, 2121
MhlI GDGCHC 2 cut(s) 302, 1970
MluCI AATT 9 cut(s) 455, 504, 570, 896, 918, 1137, 1437, 1519, 2241
MlyI GAGTC 2 cut(s) 531, 1685
MmeI TCCRAC 2 cut(s) 1573, 2078
Mph1103I ATGCAT 1 cut(s) 623
MroXI GAANNNNTTC 2 cut(s) 693, 899
MseI TTAA 5 cut(s) 582, 822, 999, 1431, 1524
MslI CAYNNNNRTG 4 cut(s) 138, 144, 368, 1401
MspI CCGG 4 cut(s) 698, 1647, 2113, 2174
MspR9I CCNGG 4 cut(s) 342, 669, 1221, 2114
MunI CAATTG 2 cut(s) 504, 1137
Mva1269I GAATGC 2 cut(s) 14, 623
MvaI CCWGG 3 cut(s) 342, 669, 1221
MvnI CGCG 1 cut(s) 480
MwoI GCNNNNNNNGC 8 cut(s) 50, 334, 437, 469, 1974, 2079, 2170, 2276
NciI CCSGG 1 cut(s) 2114
NcoI CCATGG 1 cut(s) 1621
NlaIII CATG 9 cut(s) 97, 137, 143, 203, 248, 405, 1336, 1625, 1790
NlaIV GGNNCC 3 cut(s) 464, 1836, 1950
NmuCI GTSAC 3 cut(s) 344, 1392, 1777
NruI TCGCGA 1 cut(s) 480
NsbI TGCGCA 1 cut(s) 471
NsiI ATGCAT 1 cut(s) 623
NspI RCATGY 2 cut(s) 203, 248
OliI CACNNNNGTG 1 cut(s) 368
PaeI GCATGC 1 cut(s) 203
PceI AGGCCT 1 cut(s) 9
PcsI WCGNNNNNNNCGW 1 cut(s) 2092
PctI GAATGC 2 cut(s) 14, 623
PdmI GAANNNNTTC 2 cut(s) 693, 899
PfeI GAWTC 8 cut(s) 164, 312, 482, 835, 1075, 1513, 1955, 2218
PflFI GACNNNGTC 2 cut(s) 1694, 1838
PinAI ACCGGT 1 cut(s) 1646
PkrI GCNGC 7 cut(s) 40, 43, 433, 474, 1637, 1916, 2039
PleI GAGTC 2 cut(s) 530, 1685
PpsI GAGTC 2 cut(s) 530, 1685
PpuMI RGGWCCY 2 cut(s) 1834, 2027
Psp5II RGGWCCY 2 cut(s) 1834, 2027
Psp6I CCWGG 3 cut(s) 340, 667, 1219
PspGI CCWGG 3 cut(s) 340, 667, 1219
PspN4I GGNNCC 3 cut(s) 464, 1836, 1950
PspPI GGNCC 6 cut(s) 1223, 1644, 1834, 2027, 2246, 2289
PspPPI RGGWCCY 2 cut(s) 1834, 2027
PsuI RGATCY 3 cut(s) 108, 1552, 2121
PsyI GACNNNGTC 2 cut(s) 1694, 1838
RruI TCGCGA 1 cut(s) 480
RsaI GTAC 4 cut(s) 291, 1217, 1244, 1478
RsaNI GTAC 4 cut(s) 290, 1216, 1243, 1477
RseI CAYNNNNRTG 4 cut(s) 138, 144, 368, 1401
SalI GTCGAC 2 cut(s) 1688, 1765
SaqAI TTAA 5 cut(s) 582, 822, 999, 1431, 1524
SatI GCNGC 7 cut(s) 39, 42, 432, 473, 1636, 1915, 2038
Sau96I GGNCC 6 cut(s) 1223, 1644, 1834, 2027, 2246, 2289
SchI GAGTC 2 cut(s) 531, 1685
ScrFI CCNGG 4 cut(s) 342, 669, 1221, 2114
SduI GDGCHC 2 cut(s) 302, 1970
SfaNI GCATC 5 cut(s) 315, 425, 692, 1185, 1245
SfcI CTRYAG 1 cut(s) 1227
SinI GGWCC 4 cut(s) 1223, 1644, 1834, 2027
SmiMI CAYNNNNRTG 4 cut(s) 138, 144, 368, 1401
SmlI CTYRAG 2 cut(s) 194, 536
SmoI CTYRAG 2 cut(s) 194, 536
SpeI ACTAGT 1 cut(s) 761
SphI GCATGC 1 cut(s) 203
Sse9I AATT 9 cut(s) 455, 504, 570, 896, 918, 1137, 1437, 1519, 2241
SseBI AGGCCT 1 cut(s) 9
SsiI CCGC 5 cut(s) 39, 1455, 1494, 2037, 2254
StuI AGGCCT 1 cut(s) 9
StyD4I CCNGG 4 cut(s) 340, 667, 1219, 2112
StyI CCWWGG 2 cut(s) 153, 1621
TaaI ACNGT 8 cut(s) 370, 727, 997, 1210, 1392, 1771, 1982, 2190
TaiI ACGT 1 cut(s) 24
TaqII GACCGA 1 cut(s) 1684
TasI AATT 9 cut(s) 455, 504, 570, 896, 918, 1137, 1437, 1519, 2241
TatI WGTACW 2 cut(s) 1242, 1476
TauI GCSGC 2 cut(s) 41, 2040
TfiI GAWTC 8 cut(s) 164, 312, 482, 835, 1075, 1513, 1955, 2218
Tru1I TTAA 5 cut(s) 582, 822, 999, 1431, 1524
Tru9I TTAA 5 cut(s) 582, 822, 999, 1431, 1524
TscAI CASTG 7 cut(s) 375, 426, 730, 1705, 1755, 2024, 2195
TseFI GTSAC 3 cut(s) 344, 1392, 1777
TseI GCWGC 5 cut(s) 41, 431, 472, 1635, 1914
Tsp45I GTSAC 3 cut(s) 344, 1392, 1777
TspDTI ATGAA 5 cut(s) 163, 234, 390, 1307, 1976
TspGWI ACGGA 5 cut(s) 560, 1073, 1414, 1449, 1956
TspRI CASTG 7 cut(s) 375, 426, 730, 1705, 1755, 2024, 2195
Tth111I GACNNNGTC 2 cut(s) 1694, 1838
VneI GTGCAC 1 cut(s) 298
VpaK11BI GGWCC 4 cut(s) 1223, 1644, 1834, 2027
XagI CCTNNNNNAGG 1 cut(s) 1230
XapI RAATTY 3 cut(s) 455, 1437, 1519
XbaI TCTAGA 1 cut(s) 1048
XceI RCATGY 2 cut(s) 203, 248
XmiI GTMKAC 2 cut(s) 1689, 1766
XmnI GAANNNNTTC 2 cut(s) 693, 899
Zsp2I ATGCAT 1 cut(s) 623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.