Rroxscaffold_5G00335970

Sieve element occlusion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000511
Physical Location & Seq
Forward (+)
3688354 .. 3691341
2988 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00335970.1

Sequence Viewer

Length: 1779 bp
ATGCTAGGCCTAGCGAACAATGTGGTTACCAAGGTGGCCTCAGTAATCCACACTACTCAGGAAACCATTGCTGGAGAGCTTAGCTTGTTTGCCATGTCTGACAAGAAGATCTTGGAAGAAATTTACACTACTCATGTCCATGCTGATGACTCTTTTGATGACGATTCTCTTTTTATCGTTGTTGAGAACATCCTTAAGCGTGCAATCCAAATTGTTGACAAAATTGTGCTGGGTACCCAAGTGCATGTGGAAAACATAGAGGAGAAGACCCCCAAAGCCAGCTTCAGTGTACCATTATGTACACTTAAGGGAATCTCTTGCGAGATGCAATGCAAGCCTCCTGGTGAGGAAATCGCACACAAGACAACACTGGCAATACTGAACAAGCTCTCAAAGTATTCATGGGAAGCAAAGGCATCACTGACCCTAGCAGCTTTTGCTATGGAATATGGTGAATTCTGGCTCCTTGCACAGCTTCGCGAATCAGACTACCTTGCCAAATCAATTGCAATTCTCAATCGAGTCCCTGTTCTCCTCAAGCCTTTGGAACTGCCCAAGCGCAGGCAATCAATACTTGAGCTTAACAATCTGATCAAGGCCACATTACAAGTGATTGAATGCATCGACCAGTTCAACAAGCTTTCCATTTATGACCCAAAAGATGTCCCCGGTCTGTCGATAGCATTGGATCATATTCCAGTGGATGTCTATTGGACTATCATGACTGTTAACATCGACATCCTAAAGAGAAAGAATGTGCTATTGTTCATTTCCAGCCTAGACATTACGGATGACAACATTTCGATTCTAAAACCGATCCATGAGTTCACAAAGAAAGACAATCAGTATAAGATTGTCTGGATTCCAATTGTGGAGCACTGGACTGATGACCTGAGAAAGAAGTTTGATATCCTGAAGAACAAGATGCCGTGGTTTACAGTGCAGTACTCTGGACCTATAGCAGGCATCAAGTTCATCAAGGAGGAGTGGAACTTCAAGGGTAAGCCTGCATTGGTGGTGATGAACCCACAAGGAAAGGTCGAACACCCTAACGCTCTCCACATGATTCGGGTATGGGGAGTCAAGGCCTTCCCTTTCACAGAGACAACAGAAAAAGAACTGTCACATTCTCATGGAAATAAATGGGTTACCTCTGTAGTTGATGGAATTCACCCATCTGTGCCAGCTTGGATCAAAGAAGATAAGTACATCTTCTTCTATGGTGGTAAAGACAACGAATGGATTCAGCAATTTACAAAGAAAGCCACTGCCCTTGCAAATGATCCAATCTTCAAGGAAGCAAAGATTCACATGGAGTTGGTTTGTGTCGGAAAAGGCAGCAAAGGAGAAGATGACCATGGCATTCTGGGCCGCTTCTGGACCGCTGTAGAAAGCCTGTTCTTCACCAAAGTCCACAATCAGGTCGACCCGGTCAGTCAAGAAATCCAGAAGCTTCTCTCTTACAAAAACGAAAGTGGATGGGCGGTGCTTAGCAAAGGGTCGACTGTCTTGGTCACAGGTCATGGTGTCTCGGTGTTGAAGGCGGTAGAGGACTTTGAGAAATGGAAGGACCATGTCAAGGAGAGAGGGTTTGAGTTTTGTTTCAAGGCCTATTATGGGAAGATTATTCAGGCTAGTCGACCTTGCTGCCGTCTGGACATTCCGGGGTCTAACGGAAAGGTCCCGGAGACGATGAAGTGTCCAGATTGCCACAGGAGTATGGAGACTTTTATCAGTTACAAGTGCTGCCACATTGATGGTCCTAACGCACATCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SEO_C SEO_N

Protein Analysis

592

Amino Acids

67.17

Weight (kDa)

7.07

Isoelectric Point (pI)

32.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SEO_N PF14576 33 - 243 2e-69 Sieve element occlusion N-terminus
SEO_C PF14577 385 - 451 3.2e-15 Sieve element occlusion C-terminus
SEO_C PF14577 459 - 584 1e-34 Sieve element occlusion C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000511)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02370 FvH4_4g02370 FvH4_4g02370 FvH4_4g02430 FvH4_4g02430 FvH4_4g02460 FvH4_4g02460 FvH4_4g02460 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_6g05920
malus_domestica MD00G1111000.v1.1 MD08G1225800.v1.1 MD13G1205700.v1.1 MD13G1205800.v1.1 MD13G1205900.v1.1 MD13G1206000.v1.1 MD16G1207500.v1.1 MD16G1207600.v1.1
prunus_persica Prupe.1G028400_v2.0.a1 Prupe.1G028500_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028900_v2.0.a1 Prupe.1G029000_v2.0.a1 Prupe.1G029100_v2.0.a1
pyrus_communis pycom08g19680 pycom08g19730 pycom16g17460 pycom16g17500
rosa_chinensis RchiOBHm_Chr4g0389751 RchiOBHm_Chr4g0389771 RchiOBHm_Chr4g0389791 RchiOBHm_Chr4g0389861 RchiOBHm_Chr4g0389881 RchiOBHm_Chr4g0389901 RchiOBHm_Chr4g0412411
rosa_laevigata RLG00000008288 RLG00000009901 RLG00000009945 RLG00000009954 RLG00000009956 RLG00000009957 RLG00000009958 RLG00000019246
rosa_multiflora Rmu_co8275125.1_g000001 Rmu_sc0002083.1_g000003 Rmu_sc0002083.1_g000025 Rmu_sc0002604.1_g000016 Rmu_sc0004336.1_g000031 Rmu_sc0010423.1_g000003
rosa_roxburghii Rroxscaffold_5G00335790 Rroxscaffold_5G00335850 Rroxscaffold_5G00335970 Rroxscaffold_5G00335990
rosa_rugosa Rorug03G0325100 Rorug03G0325300 Rorug03G0325500.1 Rorug03G0326800 Rorug03G0327000 Rorug04G0104400
rosa_samantha Rh4AG029900 Rh4AG030000 Rh4AG030100 Rh4AG030200 Rh4AG030600 Rh4AG172900 Rh4BG023200 Rh4BG023900 Rh4BG024000 Rh4BG024100 Rh4BG172200 Rh4DG023300 Rh4DG023800 Rh4DG023900 Rh4DG024000 Rh4DG151600
rosa_wichuraiana Rw1G002330 Rw1G002340 Rw4G002260 Rw4G002270 Rw4G002280 Rw4G002300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 233
AccB1I GGYRCC 1 cut(s) 233
AccI GTMKAC 3 cut(s) 1425, 1502, 1639
AccII CGCG 1 cut(s) 480
AciI CCGC 4 cut(s) 1372, 1383, 1484, 1544
AclWI GGATC 4 cut(s) 696, 811, 1199, 1277
AcsI RAATTY 3 cut(s) 120, 455, 1167
AcuI CTGAAG 2 cut(s) 268, 935
AfaI GTAC 5 cut(s) 235, 291, 301, 947, 1208
AfiI CCNNNNNNNGG 5 cut(s) 561, 962, 1420, 1579, 1617
AflII CTTAAG 2 cut(s) 194, 305
AgsI TTSAA 6 cut(s) 617, 634, 997, 1294, 1540, 1606
AjnI CCWGG 1 cut(s) 340
AjuI GAANNNNNNNTTGG 2 cut(s) 266, 298
Alw21I GWGCWC 1 cut(s) 879
Alw26I GTCTC 4 cut(s) 1097, 1534, 1682, 1718
AlwI GGATC 4 cut(s) 696, 811, 1199, 1277
AoxI GGCC 6 cut(s) 7, 36, 597, 1086, 1369, 1608
ApeKI GCWGC 4 cut(s) 431, 1338, 1647, 1746
ApoI RAATTY 3 cut(s) 120, 455, 1167
Asp700I GAANNNNTTC 1 cut(s) 1242
Asp718I GGTACC 1 cut(s) 233
AspLEI GCGC 1 cut(s) 561
AspS9I GGNCC 6 cut(s) 953, 1369, 1380, 1570, 1681, 1760
AsuC2I CCSGG 4 cut(s) 669, 1430, 1665, 1685
AsuHPI GGTGA 5 cut(s) 356, 464, 1030, 1163, 1396
AvaII GGWCC 5 cut(s) 953, 1380, 1570, 1681, 1760
BaeI ACNNNNGTAYC 2 cut(s) 225, 258
BanI GGYRCC 1 cut(s) 233
BarI GAAGNNNNNNTAC 2 cut(s) 1199, 1231
BbsI GAAGAC 1 cut(s) 272
Bbv12I GWGCWC 1 cut(s) 879
BbvI GCAGC 4 cut(s) 443, 1350, 1634, 1733
BccI CCATC 4 cut(s) 1157, 1183, 1473, 1751
BceAI ACGGC 2 cut(s) 913, 1635
BcgI CGANNNNNNTGC 2 cut(s) 1629, 1663
BciT130I CCWGG 1 cut(s) 342
BclI TGATCA 1 cut(s) 591
BcnI CCSGG 4 cut(s) 669, 1430, 1665, 1685
BcoDI GTCTC 4 cut(s) 1097, 1534, 1682, 1718
BfaI CTAG 5 cut(s) 5, 11, 428, 779, 1635
BfmI CTRYAG 3 cut(s) 957, 1155, 1386
BfrI CTTAAG 2 cut(s) 194, 305
BglII AGATCT 1 cut(s) 108
BisI GCNGC 5 cut(s) 432, 1339, 1372, 1648, 1747
BlpI GCTNAGC 2 cut(s) 80, 1490
BlsI GCNGC 5 cut(s) 433, 1340, 1373, 1649, 1748
BmcAI AGTACT 1 cut(s) 947
Bme1390I CCNGG 5 cut(s) 342, 669, 1430, 1665, 1685
Bme18I GGWCC 5 cut(s) 953, 1380, 1570, 1681, 1760
BmgT120I GGNCC 6 cut(s) 953, 1369, 1380, 1570, 1681, 1760
BmiI GGNNCC 3 cut(s) 235, 464, 1683
BmrFI CCNGG 5 cut(s) 342, 669, 1430, 1665, 1685
BmsI GCATC 5 cut(s) 315, 425, 630, 915, 975
BpiI GAAGAC 1 cut(s) 272
BpmI CTGGAG 1 cut(s) 93
Bpu1102I GCTNAGC 2 cut(s) 80, 1490
BpuEI CTTGAG 2 cut(s) 521, 596
BpuMI CCSGG 4 cut(s) 669, 1430, 1665, 1685
BsaJI CCNNGG 5 cut(s) 30, 667, 929, 1357, 1664
BsaXI ACNNNNNCTCC 2 cut(s) 1574, 1604
Bsc4I CCNNNNNNNGG 5 cut(s) 561, 962, 1420, 1579, 1617
Bse1I ACTGG 4 cut(s) 375, 628, 698, 884
Bse3DI GCAATG 2 cut(s) 66, 335
BseBI CCWGG 1 cut(s) 342
BseDI CCNNGG 5 cut(s) 30, 667, 929, 1357, 1664
BseGI GGATG 5 cut(s) 189, 709, 738, 796, 1484
BseLI CCNNNNNNNGG 5 cut(s) 561, 962, 1420, 1579, 1617
BseMI GCAATG 2 cut(s) 66, 335
BseMII CTCAG 3 cut(s) 54, 71, 884
BseNI ACTGG 4 cut(s) 375, 628, 698, 884
BseRI GAGGAG 3 cut(s) 275, 524, 998
BseXI GCAGC 4 cut(s) 443, 1350, 1634, 1733
BseYI CCCAGC 1 cut(s) 229
BsgI GTGCAG 1 cut(s) 962
Bsh1236I CGCG 1 cut(s) 480
BshFI GGCC 6 cut(s) 9, 38, 599, 1088, 1371, 1610
BshNI GGYRCC 1 cut(s) 233
BsiHKAI GWGCWC 1 cut(s) 879
BsiSI CCGG 4 cut(s) 669, 1430, 1664, 1685
BslFI GGGAC 3 cut(s) 509, 650, 1667
BslI CCNNNNNNNGG 5 cut(s) 561, 962, 1420, 1579, 1617
BsmAI GTCTC 4 cut(s) 1097, 1534, 1682, 1718
BsmBI CGTCTC 1 cut(s) 1682
BsmFI GGGAC 3 cut(s) 509, 650, 1667
BsmI GAATGC 2 cut(s) 623, 1362
BsnI GGCC 6 cut(s) 9, 38, 599, 1088, 1371, 1610
Bsp1286I GDGCHC 1 cut(s) 879
Bsp1407I TGTACA 1 cut(s) 299
Bsp143I GATC 6 cut(s) 108, 591, 688, 816, 1191, 1282
Bsp1720I GCTNAGC 2 cut(s) 80, 1490
Bsp19I CCATGG 1 cut(s) 1357
Bsp68I TCGCGA 1 cut(s) 480
BspACI CCGC 4 cut(s) 1372, 1383, 1484, 1544
BspANI GGCC 6 cut(s) 9, 38, 599, 1088, 1371, 1610
BspCNI CTCAG 3 cut(s) 53, 70, 885
BspFNI CGCG 1 cut(s) 480
BspHI TCATGA 1 cut(s) 720
BspLI GGNNCC 3 cut(s) 235, 464, 1683
BspPI GGATC 4 cut(s) 696, 811, 1199, 1277
BspT107I GGYRCC 1 cut(s) 233
BspTI CTTAAG 2 cut(s) 194, 305
BsrDI GCAATG 2 cut(s) 66, 335
BsrGI TGTACA 1 cut(s) 299
BsrI ACTGG 4 cut(s) 375, 628, 698, 884
BssECI CCNNGG 5 cut(s) 30, 667, 929, 1357, 1664
BssMI GATC 6 cut(s) 108, 591, 688, 816, 1191, 1282
BssT1I CCWWGG 2 cut(s) 30, 1357
Bst2UI CCWGG 1 cut(s) 342
Bst4CI ACNGT 4 cut(s) 727, 940, 1122, 1507
BstAFI CTTAAG 2 cut(s) 194, 305
BstAPI GCANNNNNTGC 1 cut(s) 437
BstAUI TGTACA 1 cut(s) 299
BstC8I GCNNGC 7 cut(s) 201, 280, 335, 563, 964, 1008, 1185
BstDEI CTNAG 5 cut(s) 40, 57, 80, 893, 1490
BstDSI CCRYGG 2 cut(s) 929, 1357
BstEII GGTNACC 2 cut(s) 25, 1147
BstENI CCTNNNNNAGG 1 cut(s) 960
BstF5I GGATG 5 cut(s) 189, 709, 738, 796, 1484
BstFNI CGCG 1 cut(s) 480
BstHHI GCGC 1 cut(s) 561
BstKTI GATC 6 cut(s) 111, 594, 691, 819, 1194, 1285
BstMAI GTCTC 4 cut(s) 1097, 1534, 1682, 1718
BstMBI GATC 6 cut(s) 108, 591, 688, 816, 1191, 1282
BstMWI GCNNNNNNNGC 3 cut(s) 334, 437, 1368
BstNI CCWGG 1 cut(s) 342
BstNSI RCATGY 1 cut(s) 248
BstPI GGTNACC 2 cut(s) 25, 1147
BstSCI CCNGG 5 cut(s) 340, 667, 1428, 1663, 1683
BstSFI CTRYAG 3 cut(s) 957, 1155, 1386
BstUI CGCG 1 cut(s) 480
BstV1I GCAGC 4 cut(s) 443, 1350, 1634, 1733
BstV2I GAAGAC 1 cut(s) 272
BstX2I RGATCY 1 cut(s) 108
BstXI CCANNNNNNTGG 1 cut(s) 1757
BstYI RGATCY 1 cut(s) 108
BsuRI GGCC 6 cut(s) 9, 38, 599, 1088, 1371, 1610
BtgI CCRYGG 2 cut(s) 929, 1357
BtsCI GGATG 5 cut(s) 189, 709, 738, 796, 1484
BtsI GCAGTG 1 cut(s) 1266
BtsIMutI CAGTG 7 cut(s) 292, 368, 419, 705, 877, 945, 1266
BtuMI TCGCGA 1 cut(s) 480
Cac8I GCNNGC 7 cut(s) 201, 280, 335, 563, 964, 1008, 1185
CciI TCATGA 1 cut(s) 720
CfoI GCGC 1 cut(s) 561
Cfr13I GGNCC 6 cut(s) 953, 1369, 1380, 1570, 1681, 1760
Csp6I GTAC 5 cut(s) 234, 290, 300, 946, 1207
CspCI CAANNNNNGTGG 2 cut(s) 1255, 1290
CviQI GTAC 5 cut(s) 234, 290, 300, 946, 1207
DdeI CTNAG 5 cut(s) 40, 57, 80, 893, 1490
DpnI GATC 6 cut(s) 110, 593, 690, 818, 1193, 1284
DpnII GATC 6 cut(s) 108, 591, 688, 816, 1191, 1282
Eco130I CCWWGG 2 cut(s) 30, 1357
Eco147I AGGCCT 3 cut(s) 9, 1088, 1610
Eco32I GATATC 1 cut(s) 910
Eco47I GGWCC 5 cut(s) 953, 1380, 1570, 1681, 1760
Eco57I CTGAAG 2 cut(s) 268, 935
Eco91I GGTNACC 2 cut(s) 25, 1147
EcoNI CCTNNNNNAGG 1 cut(s) 960
EcoO109I RGGNCCY 1 cut(s) 1681
EcoO65I GGTNACC 2 cut(s) 25, 1147
EcoRI GAATTC 2 cut(s) 455, 1167
EcoRII CCWGG 1 cut(s) 340
EcoRV GATATC 1 cut(s) 910
EcoT14I CCWWGG 2 cut(s) 30, 1357
EcoT22I ATGCAT 1 cut(s) 623
ErhI CCWWGG 2 cut(s) 30, 1357
Esp3I CGTCTC 1 cut(s) 1682
FalI AAGNNNNNCTT 4 cut(s) 95, 127, 1196, 1228
FaqI GGGAC 3 cut(s) 509, 650, 1667
FbaI TGATCA 1 cut(s) 591
FblI GTMKAC 3 cut(s) 1425, 1502, 1639
Fnu4HI GCNGC 5 cut(s) 432, 1339, 1372, 1648, 1747
FokI GGATG 5 cut(s) 176, 716, 725, 803, 1491
Fsp4HI GCNGC 5 cut(s) 432, 1339, 1372, 1648, 1747
FspBI CTAG 5 cut(s) 5, 11, 428, 779, 1635
GlaI GCGC 1 cut(s) 560
GluI GCNGC 5 cut(s) 432, 1339, 1372, 1648, 1747
GsaI CCCAGC 1 cut(s) 233
GsuI CTGGAG 1 cut(s) 93
HaeIII GGCC 6 cut(s) 9, 38, 599, 1088, 1371, 1610
HapII CCGG 4 cut(s) 669, 1430, 1664, 1685
HhaI GCGC 1 cut(s) 561
Hin6I GCGC 1 cut(s) 559
HinP1I GCGC 1 cut(s) 559
HincII GTYRAC 5 cut(s) 217, 730, 1426, 1503, 1640
HindII GTYRAC 5 cut(s) 217, 730, 1426, 1503, 1640
HindIII AAGCTT 2 cut(s) 638, 1451
HpaI GTTAAC 1 cut(s) 730
HpaII CCGG 4 cut(s) 669, 1430, 1664, 1685
HphI GGTGA 5 cut(s) 356, 464, 1030, 1163, 1396
Hpy188I TCNGA 4 cut(s) 100, 487, 591, 1331
HpyAV CCTTC 3 cut(s) 1099, 1534, 1561
HpyCH4III ACNGT 4 cut(s) 727, 940, 1122, 1507
HpyF10VI GCNNNNNNNGC 3 cut(s) 334, 437, 1368
HpyF3I CTNAG 5 cut(s) 40, 57, 80, 893, 1490
HspAI GCGC 1 cut(s) 559
KpnI GGTACC 1 cut(s) 237
Ksp22I TGATCA 1 cut(s) 591
KspAI GTTAAC 1 cut(s) 730
Kzo9I GATC 6 cut(s) 108, 591, 688, 816, 1191, 1282
LmnI GCTCC 2 cut(s) 468, 874
Lsp1109I GCAGC 4 cut(s) 443, 1350, 1634, 1733
LweI GCATC 5 cut(s) 315, 425, 630, 915, 975
MaeI CTAG 5 cut(s) 5, 11, 428, 779, 1635
MaeIII GTNAC 5 cut(s) 25, 1122, 1147, 1513, 1736
MalI GATC 6 cut(s) 110, 593, 690, 818, 1193, 1284
MboI GATC 6 cut(s) 108, 591, 688, 816, 1191, 1282
MfeI CAATTG 2 cut(s) 504, 867
MflI RGATCY 1 cut(s) 108
MhlI GDGCHC 1 cut(s) 879
MluCI AATT 9 cut(s) 120, 210, 222, 455, 504, 510, 867, 1167, 1250
MlyI GAGTC 3 cut(s) 143, 531, 1089
MmeI TCCRAC 1 cut(s) 1309
MnlI CCTC 9 cut(s) 49, 253, 340, 348, 545, 976, 1162, 1543, 1580
Mph1103I ATGCAT 1 cut(s) 623
MroXI GAANNNNTTC 1 cut(s) 1242
MseI TTAA 4 cut(s) 195, 306, 582, 729
MslI CAYNNNNRTG 4 cut(s) 138, 144, 1131, 1755
MspA1I CMGCKG 1 cut(s) 1385
MspCI CTTAAG 2 cut(s) 194, 305
MspI CCGG 4 cut(s) 669, 1430, 1664, 1685
MspR9I CCNGG 5 cut(s) 342, 669, 1430, 1665, 1685
MunI CAATTG 2 cut(s) 504, 867
Mva1269I GAATGC 2 cut(s) 623, 1362
MvaI CCWGG 1 cut(s) 342
MvnI CGCG 1 cut(s) 480
MwoI GCNNNNNNNGC 3 cut(s) 334, 437, 1368
NciI CCSGG 4 cut(s) 669, 1430, 1665, 1685
NcoI CCATGG 1 cut(s) 1357
NdeII GATC 6 cut(s) 108, 591, 688, 816, 1191, 1282
NlaIV GGNNCC 3 cut(s) 235, 464, 1683
NmuCI GTSAC 2 cut(s) 1122, 1513
NruI TCGCGA 1 cut(s) 480
NsiI ATGCAT 1 cut(s) 623
NspI RCATGY 1 cut(s) 248
PagI TCATGA 1 cut(s) 720
PceI AGGCCT 3 cut(s) 9, 1088, 1610
PctI GAATGC 2 cut(s) 623, 1362
PdmI GAANNNNTTC 1 cut(s) 1242
PfeI GAWTC 8 cut(s) 164, 312, 482, 805, 862, 1066, 1243, 1306
PflFI GACNNNGTC 2 cut(s) 1430, 1574
PfoI TCCNGGA 1 cut(s) 1683
PkrI GCNGC 5 cut(s) 433, 1340, 1373, 1649, 1748
PleI GAGTC 3 cut(s) 143, 530, 1088
PpsI GAGTC 3 cut(s) 143, 530, 1088
PpuMI RGGWCCY 1 cut(s) 1681
Psp5II RGGWCCY 1 cut(s) 1681
Psp6I CCWGG 1 cut(s) 340
PspEI GGTNACC 2 cut(s) 25, 1147
PspFI CCCAGC 1 cut(s) 229
PspGI CCWGG 1 cut(s) 340
PspN4I GGNNCC 3 cut(s) 235, 464, 1683
PspPI GGNCC 6 cut(s) 953, 1369, 1380, 1570, 1681, 1760
PspPPI RGGWCCY 1 cut(s) 1681
PsuI RGATCY 1 cut(s) 108
PsyI GACNNNGTC 2 cut(s) 1430, 1574
RruI TCGCGA 1 cut(s) 480
RsaI GTAC 5 cut(s) 235, 291, 301, 947, 1208
RsaNI GTAC 5 cut(s) 234, 290, 300, 946, 1207
RseI CAYNNNNRTG 4 cut(s) 138, 144, 1131, 1755
SalI GTCGAC 3 cut(s) 1424, 1501, 1638
SaqAI TTAA 4 cut(s) 195, 306, 582, 729
SatI GCNGC 5 cut(s) 432, 1339, 1372, 1648, 1747
Sau3AI GATC 6 cut(s) 108, 591, 688, 816, 1191, 1282
Sau96I GGNCC 6 cut(s) 953, 1369, 1380, 1570, 1681, 1760
ScaI AGTACT 1 cut(s) 947
SchI GAGTC 3 cut(s) 143, 531, 1089
ScrFI CCNGG 5 cut(s) 342, 669, 1430, 1665, 1685
SduI GDGCHC 1 cut(s) 879
SfaNI GCATC 5 cut(s) 315, 425, 630, 915, 975
SfcI CTRYAG 3 cut(s) 957, 1155, 1386
SinI GGWCC 5 cut(s) 953, 1380, 1570, 1681, 1760
SmiMI CAYNNNNRTG 4 cut(s) 138, 144, 1131, 1755
SmlI CTYRAG 4 cut(s) 194, 305, 536, 575
SmoI CTYRAG 4 cut(s) 194, 305, 536, 575
Sse9I AATT 9 cut(s) 120, 210, 222, 455, 504, 510, 867, 1167, 1250
SseBI AGGCCT 3 cut(s) 9, 1088, 1610
SsiI CCGC 4 cut(s) 1372, 1383, 1484, 1544
SspMI CTAG 5 cut(s) 5, 11, 428, 779, 1635
StuI AGGCCT 3 cut(s) 9, 1088, 1610
StyD4I CCNGG 5 cut(s) 340, 667, 1428, 1663, 1683
StyI CCWWGG 2 cut(s) 30, 1357
TaaI ACNGT 4 cut(s) 727, 940, 1122, 1507
TaqI TCGA 9 cut(s) 520, 624, 677, 735, 803, 1041, 1425, 1502, 1639
TasI AATT 9 cut(s) 120, 210, 222, 455, 504, 510, 867, 1167, 1250
TatI WGTACW 3 cut(s) 299, 945, 1206
TauI GCSGC 1 cut(s) 1374
TfiI GAWTC 8 cut(s) 164, 312, 482, 805, 862, 1066, 1243, 1306
Tru1I TTAA 4 cut(s) 195, 306, 582, 729
Tru9I TTAA 4 cut(s) 195, 306, 582, 729
TscAI CASTG 7 cut(s) 292, 375, 426, 705, 884, 945, 1273
TseFI GTSAC 2 cut(s) 1122, 1513
TseI GCWGC 4 cut(s) 431, 1338, 1647, 1746
Tsp45I GTSAC 2 cut(s) 1122, 1513
TspDTI ATGAA 5 cut(s) 390, 757, 964, 1037, 1709
TspGWI ACGGA 2 cut(s) 803, 1689
TspRI CASTG 7 cut(s) 292, 375, 426, 705, 884, 945, 1273
Tth111I GACNNNGTC 2 cut(s) 1430, 1574
Vha464I CTTAAG 2 cut(s) 194, 305
VpaK11BI GGWCC 5 cut(s) 953, 1380, 1570, 1681, 1760
XagI CCTNNNNNAGG 1 cut(s) 960
XapI RAATTY 3 cut(s) 120, 455, 1167
XceI RCATGY 1 cut(s) 248
XmiI GTMKAC 3 cut(s) 1425, 1502, 1639
XmnI GAANNNNTTC 1 cut(s) 1242
XspI CTAG 5 cut(s) 5, 11, 428, 779, 1635
ZrmI AGTACT 1 cut(s) 947
Zsp2I ATGCAT 1 cut(s) 623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.