Prupe.1G028500_v2.0.a1

Sieve element occlusion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000511
Physical Location & Seq
Forward (+)
2003346 .. 2006552
3207 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G028500.1

Sequence Viewer

Length: 2037 bp
ATGCTAGGCTTAGCAAACAATGTGGTTAGCAAGGTGGCCTCAGTCGTCACTGGTCACCATGAGCTTAGCCTGTTTTCCATGTCTGACAAGAAAATCTTGGACGAAATTTATGCAACTCATCATGTCAATGTTGATACTTCCTTTGATGACGATTCTCTTTTTGGCATTGTTGAAAACATCCTCAAGCATGCAACCCAAACTGTTGACAAAATTGTGCAGGGTACCCAAGTGCACGTGGAAAACATAGAGGAGCACACTCCCAAAGCCAGCTTCAGTACACCACTGTGCACACTTAAGTCAATAGCCAGCGAGATGCAATGCAAACCTCCTAGTGAGGAAGTCGCCCACAAAACTACCCTGGCAATACTGAACAAGCTGTCAAGCTATTCATGGGAAGCAAAGGCAGTGTTGACTCTGGCAGCTTTTGCTATGGAATATGGGGAGTTCTGGCTCCTTGCCCAGCTTCAGGAATCGCACCGACTTGCCAAATCAATTTCAATCCTGAAGAGAGTCCCTTTCCTCCTCAAGCCATCAAACCTGCAAAAAAGAAGGCAAGCAGTGCTTGAGCTTAACAACTTGATCAAGACTACATTGCAAGTTATCGAGATCTTCGATCAGTTCGATAAGCTTTCTAGTTATGACCCAAAAGATGTGCCGGAGTTGGCATCAGCAATGGACCATATTCCAGTGGATGTGTATTGGGCTACTGTGACTGTTGTTGCTTGTGCAACTAAGGTCACTATTCTTACCAGTGATGTGGAGAAGGAACATGACCTAGCCCCATATGCTCAAAAAATCCACTTCGTCCTGAACAAGCTTAAGATTCAGCTGAAAATTTGCAGAACACAGATTGAGGAGGCGGAGACTTACCGGAAGCTCAAGAAAACCTTTCGAACCCCTACTGAAGTAAAGGAGGTTTTCAAGGCCCTGATCTTTACCAAGGACAATGTTCAGCCACTGATTGATGGTTCCACTAAACAAACGGTTGAGATCGACATCCTGAGGAAGAAGAATATACTACTGTTCATTTCAAGCCTCGAAATCTCCGATGATGATATTTCTATCCTCAAACCGATTTACGAGTCCACTAAGAAAGACAATCAGCATAAGATTGTGTGGGTTCCAATTGTCGAGCAGTGGACCGATGACCTGAGAAAGAAGTTTGAGACCCTGAGGCTGAAGATGCCATGGTACACAGTGCAGAACCCTGCAACCATTGCCGGCATCAGGTTCATCAAGGAGGAGTGGAACTTCAAGGGTAAGCCTACATTGGTGGTGATGAACCCACAAGGAAAGGTCGAACATTCCAACGCATTCCACATGATTCGGGTTTGGGGAACTCAGGCCTTCCCTTTCACAGAAACAACCGAAAAAGAACTCTCAAATTCTCATGGACATAAATGGGTTGGCAATGTAGTCAAAGAGATTCACCCGACTCTACCCAACATGATGAAGGACGATAAGTACGTTTTCTTCTATGGAGGCAAAGACAATGAGTGGATTAACCAATTCACAAAGAAAGCAACTGCCTTTGTAAACGACCCCATCTTCAAGGAAGCAAAGATTCACATTGAGCTGTTTTGCGTGGGGAAAGGCAGCAAGGGAGAAGATGACCACGGCATCCTCGGGCGCTTCTGGACTGGCATAGAAAGCTTGTTTCACACCAAGATTCACAAGGAGCCCGACTCAGTCTCACAAGAAATCCAGAAGCTGCTTTCTTACAAGAACGAAAGTGGATGGGCGGTGCTCAGCAAAGGGCATTCTTTGGTTGTCACTGGTCATGGTGTCTCAATCTTGAAGGTCATAGAGGACTTTGACAAATGGAAGGACCATGTGAAAGAGAAGGGCTTTGAGTTTTGCTTCACAACATACCATGAGAAGATTCGTGTTGCAAATCGTCCTTGCTGCCGCCTTGACATTCCAGGCTCTACCGGGAAGGTCCCGGAAACAATGAAATGTCCCGATTGCCACCGTAGTATGGAGACTTTTATCAGTTACAAGTGCTGCCACATTGATGGTCCTAATGCACACCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SEO_C SEO_N

Protein Analysis

679

Amino Acids

77.37

Weight (kDa)

7.64

Isoelectric Point (pI)

34.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000511)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02370 FvH4_4g02370 FvH4_4g02370 FvH4_4g02430 FvH4_4g02430 FvH4_4g02460 FvH4_4g02460 FvH4_4g02460 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_6g05920
malus_domestica MD00G1111000.v1.1 MD08G1225800.v1.1 MD13G1205700.v1.1 MD13G1205800.v1.1 MD13G1205900.v1.1 MD13G1206000.v1.1 MD16G1207500.v1.1 MD16G1207600.v1.1
prunus_persica Prupe.1G028400_v2.0.a1 Prupe.1G028500_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028900_v2.0.a1 Prupe.1G029000_v2.0.a1 Prupe.1G029100_v2.0.a1
pyrus_communis pycom08g19680 pycom08g19730 pycom16g17460 pycom16g17500
rosa_chinensis RchiOBHm_Chr4g0389751 RchiOBHm_Chr4g0389771 RchiOBHm_Chr4g0389791 RchiOBHm_Chr4g0389861 RchiOBHm_Chr4g0389881 RchiOBHm_Chr4g0389901 RchiOBHm_Chr4g0412411
rosa_laevigata RLG00000008288 RLG00000009901 RLG00000009945 RLG00000009954 RLG00000009956 RLG00000009957 RLG00000009958 RLG00000019246
rosa_multiflora Rmu_co8275125.1_g000001 Rmu_sc0002083.1_g000003 Rmu_sc0002083.1_g000025 Rmu_sc0002604.1_g000016 Rmu_sc0004336.1_g000031 Rmu_sc0010423.1_g000003
rosa_roxburghii Rroxscaffold_5G00335790 Rroxscaffold_5G00335850 Rroxscaffold_5G00335970 Rroxscaffold_5G00335990
rosa_rugosa Rorug03G0325100 Rorug03G0325300 Rorug03G0325500.1 Rorug03G0326800 Rorug03G0327000 Rorug04G0104400
rosa_samantha Rh4AG029900 Rh4AG030000 Rh4AG030100 Rh4AG030200 Rh4AG030600 Rh4AG172900 Rh4BG023200 Rh4BG023900 Rh4BG024000 Rh4BG024100 Rh4BG172200 Rh4DG023300 Rh4DG023800 Rh4DG023900 Rh4DG024000 Rh4DG151600
rosa_wichuraiana Rw1G002330 Rw1G002340 Rw4G002260 Rw4G002270 Rw4G002280 Rw4G002300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 546
Acc65I GGTACC 1 cut(s) 221
AccB1I GGYRCC 1 cut(s) 221
AciI CCGC 3 cut(s) 860, 1742, 1909
AcsI RAATTY 3 cut(s) 105, 834, 1384
AcuI CTGAAG 5 cut(s) 256, 449, 524, 924, 1199
AcvI CACGTG 1 cut(s) 235
AfaI GTAC 4 cut(s) 223, 277, 1193, 1466
AfiI CCNNNNNNNGG 3 cut(s) 466, 1227, 1978
AflII CTTAAG 2 cut(s) 293, 818
AgsI TTSAA 7 cut(s) 173, 498, 922, 1032, 1255, 1552, 1798
AjnI CCWGG 2 cut(s) 357, 1921
AjuI GAANNNNNNNTTGG 2 cut(s) 254, 286
AleI CACNNNNGTG 1 cut(s) 283
Alw21I GWGCWC 4 cut(s) 234, 255, 290, 1749
Alw26I GTCTC 5 cut(s) 857, 1160, 1696, 1792, 1976
Alw44I GTGCAC 2 cut(s) 230, 286
AlwNI CAGNNNCTG 2 cut(s) 958, 1711
Ama87I CYCGRG 1 cut(s) 1625
AoxI GGCC 3 cut(s) 36, 924, 1344
ApaLI GTGCAC 2 cut(s) 230, 286
ApeKI GCWGC 5 cut(s) 419, 1596, 1711, 1905, 2004
ApoI RAATTY 3 cut(s) 105, 834, 1384
Asp718I GGTACC 1 cut(s) 221
AspLEI GCGC 1 cut(s) 1632
AspS9I GGNCC 6 cut(s) 676, 925, 1140, 1828, 1939, 2018
AsuC2I CCSGG 2 cut(s) 1933, 1943
AsuHPI GGTGA 3 cut(s) 47, 1288, 1421
AsuII TTCGAA 1 cut(s) 892
AvaI CYCGRG 1 cut(s) 1625
AvaII GGWCC 5 cut(s) 676, 1140, 1828, 1939, 2018
AxyI CCTNAGG 2 cut(s) 1001, 1172
BaeGI GKGCMC 2 cut(s) 234, 290
BaeI ACNNNNGTAYC 2 cut(s) 213, 246
BanI GGYRCC 1 cut(s) 221
BanII GRGCYC 1 cut(s) 1683
BarI GAAGNNNNNNTAC 2 cut(s) 1457, 1489
BbrPI CACGTG 1 cut(s) 235
Bbv12I GWGCWC 4 cut(s) 234, 255, 290, 1749
BbvI GCAGC 5 cut(s) 431, 1608, 1698, 1892, 1991
BccI CCATC 5 cut(s) 538, 959, 1553, 1731, 2009
BceAI ACGGC 1 cut(s) 1633
BcgI CGANNNNNNTGC 2 cut(s) 92, 126
BciT130I CCWGG 2 cut(s) 359, 1923
BclI TGATCA 1 cut(s) 579
BcnI CCSGG 2 cut(s) 1933, 1943
BcoDI GTCTC 5 cut(s) 857, 1160, 1696, 1792, 1976
BfaI CTAG 4 cut(s) 5, 330, 633, 776
BfoI RGCGCY 1 cut(s) 1633
BfrI CTTAAG 2 cut(s) 293, 818
BfuAI ACCTGC 1 cut(s) 546
BglII AGATCT 1 cut(s) 606
BisI GCNGC 6 cut(s) 420, 1597, 1712, 1906, 1909, 2005
BlpI GCTNAGC 3 cut(s) 10, 65, 1748
BlsI GCNGC 6 cut(s) 421, 1598, 1713, 1907, 1910, 2006
Bme1390I CCNGG 4 cut(s) 359, 1923, 1933, 1943
Bme18I GGWCC 5 cut(s) 676, 1140, 1828, 1939, 2018
BmeT110I CYCGRG 1 cut(s) 1625
BmgT120I GGNCC 6 cut(s) 676, 925, 1140, 1828, 1939, 2018
BmiI GGNNCC 6 cut(s) 223, 452, 970, 1122, 1680, 1941
BmrFI CCNGG 4 cut(s) 359, 1923, 1933, 1943
BmsI GCATC 5 cut(s) 303, 674, 1173, 1233, 1629
BplI GAGNNNNNCTC 2 cut(s) 1670, 1702
Bpu1102I GCTNAGC 3 cut(s) 10, 65, 1748
Bpu14I TTCGAA 1 cut(s) 892
BpuEI CTTGAG 4 cut(s) 167, 509, 584, 863
BpuMI CCSGG 2 cut(s) 1933, 1943
BsaAI YACGTR 1 cut(s) 235
BsaBI GATNNNNATC 1 cut(s) 995
BsaI GGTCTC 1 cut(s) 1160
BsaJI CCNNGG 5 cut(s) 357, 939, 1187, 1615, 1624
BsaWI WCCGGW 1 cut(s) 870
Bsc4I CCNNNNNNNGG 3 cut(s) 466, 1227, 1978
Bse118I RCCGGY 1 cut(s) 1220
Bse1I ACTGG 5 cut(s) 55, 686, 750, 1645, 1780
Bse21I CCTNAGG 2 cut(s) 1001, 1172
Bse3DI GCAATG 5 cut(s) 323, 590, 678, 1215, 1417
Bse8I GATNNNNATC 1 cut(s) 995
BseBI CCWGG 2 cut(s) 359, 1923
BseDI CCNNGG 5 cut(s) 357, 939, 1187, 1615, 1624
BseGI GGATG 5 cut(s) 177, 697, 996, 1620, 1742
BseJI GATNNNNATC 1 cut(s) 995
BseLI CCNNNNNNNGG 3 cut(s) 466, 1227, 1978
BseMI GCAATG 5 cut(s) 323, 590, 678, 1215, 1417
BseMII CTCAG 7 cut(s) 54, 992, 1142, 1163, 1355, 1701, 1762
BseNI ACTGG 5 cut(s) 55, 686, 750, 1645, 1780
BseRI GAGGAG 4 cut(s) 263, 512, 869, 1256
BseSI GKGCMC 2 cut(s) 234, 290
BseXI GCAGC 5 cut(s) 431, 1608, 1698, 1892, 1991
BseYI CCCAGC 1 cut(s) 459
BsgI GTGCAG 2 cut(s) 236, 1220
BshFI GGCC 3 cut(s) 38, 926, 1346
BshNI GGYRCC 1 cut(s) 221
BsiHKAI GWGCWC 4 cut(s) 234, 255, 290, 1749
BsiHKCI CYCGRG 1 cut(s) 1625
BsiSI CCGG 5 cut(s) 656, 871, 1221, 1932, 1943
BslFI GGGAC 3 cut(s) 497, 1925, 1944
BslI CCNNNNNNNGG 3 cut(s) 466, 1227, 1978
BsmAI GTCTC 5 cut(s) 857, 1160, 1696, 1792, 1976
BsmFI GGGAC 3 cut(s) 497, 1925, 1944
BsmI GAATGC 2 cut(s) 1313, 1759
BsnI GGCC 3 cut(s) 38, 926, 1346
Bso31I GGTCTC 1 cut(s) 1160
BsoBI CYCGRG 1 cut(s) 1625
Bsp119I TTCGAA 1 cut(s) 892
Bsp1286I GDGCHC 5 cut(s) 234, 255, 290, 1683, 1749
Bsp143I GATC 5 cut(s) 579, 606, 613, 930, 990
Bsp1720I GCTNAGC 3 cut(s) 10, 65, 1748
Bsp19I CCATGG 1 cut(s) 1187
BspACI CCGC 3 cut(s) 860, 1742, 1909
BspANI GGCC 3 cut(s) 38, 926, 1346
BspCNI CTCAG 7 cut(s) 53, 993, 1143, 1164, 1354, 1700, 1761
BspLI GGNNCC 6 cut(s) 223, 452, 970, 1122, 1680, 1941
BspMI ACCTGC 1 cut(s) 546
BspT104I TTCGAA 1 cut(s) 892
BspT107I GGYRCC 1 cut(s) 221
BspTI CTTAAG 2 cut(s) 293, 818
BspTNI GGTCTC 1 cut(s) 1160
BsrDI GCAATG 5 cut(s) 323, 590, 678, 1215, 1417
BsrFI RCCGGY 1 cut(s) 1220
BsrI ACTGG 5 cut(s) 55, 686, 750, 1645, 1780
BssAI RCCGGY 1 cut(s) 1220
BssECI CCNNGG 5 cut(s) 357, 939, 1187, 1615, 1624
BssMI GATC 5 cut(s) 579, 606, 613, 930, 990
BssT1I CCWWGG 2 cut(s) 939, 1187
Bst2UI CCWGG 2 cut(s) 359, 1923
Bst4CI ACNGT 8 cut(s) 202, 285, 709, 715, 985, 1023, 1198, 1973
Bst6I CTCTTC 1 cut(s) 500
BstAFI CTTAAG 2 cut(s) 293, 818
BstAPI GCANNNNNTGC 3 cut(s) 425, 559, 1217
BstBAI YACGTR 1 cut(s) 235
BstBI TTCGAA 1 cut(s) 892
BstC8I GCNNGC 5 cut(s) 189, 268, 307, 555, 1222
BstDSI CCRYGG 2 cut(s) 1187, 1615
BstEII GGTNACC 1 cut(s) 53
BstF5I GGATG 5 cut(s) 177, 697, 996, 1620, 1742
BstH2I RGCGCY 1 cut(s) 1633
BstHHI GCGC 1 cut(s) 1632
BstKTI GATC 5 cut(s) 582, 609, 616, 933, 993
BstMAI GTCTC 5 cut(s) 857, 1160, 1696, 1792, 1976
BstMBI GATC 5 cut(s) 579, 606, 613, 930, 990
BstMWI GCNNNNNNNGC 6 cut(s) 425, 559, 785, 1183, 1217, 1650
BstNI CCWGG 2 cut(s) 359, 1923
BstNSI RCATGY 1 cut(s) 191
BstPI GGTNACC 1 cut(s) 53
BstSCI CCNGG 4 cut(s) 357, 1921, 1931, 1941
BstSLI GKGCMC 2 cut(s) 234, 290
BstV1I GCAGC 5 cut(s) 431, 1608, 1698, 1892, 1991
BstX2I RGATCY 1 cut(s) 606
BstXI CCANNNNNNTGG 2 cut(s) 757, 2015
BstYI RGATCY 1 cut(s) 606
Bsu36I CCTNAGG 2 cut(s) 1001, 1172
BsuRI GGCC 3 cut(s) 38, 926, 1346
BtgI CCRYGG 2 cut(s) 1187, 1615
BtsCI GGATG 5 cut(s) 177, 697, 996, 1620, 1742
BtsI GCAGTG 3 cut(s) 411, 564, 1142
BveI ACCTGC 1 cut(s) 546
Cac8I GCNNGC 5 cut(s) 189, 268, 307, 555, 1222
CaiI CAGNNNCTG 2 cut(s) 958, 1711
CfoI GCGC 1 cut(s) 1632
Cfr10I RCCGGY 1 cut(s) 1220
Cfr13I GGNCC 6 cut(s) 676, 925, 1140, 1828, 1939, 2018
Csp6I GTAC 4 cut(s) 222, 276, 1192, 1465
CspCI CAANNNNNGTGG 1 cut(s) 38
CviQI GTAC 4 cut(s) 222, 276, 1192, 1465
DpnI GATC 5 cut(s) 581, 608, 615, 932, 992
DpnII GATC 5 cut(s) 579, 606, 613, 930, 990
Eam1104I CTCTTC 1 cut(s) 500
EarI CTCTTC 1 cut(s) 500
EciI GGCGGA 1 cut(s) 875
Eco130I CCWWGG 2 cut(s) 939, 1187
Eco147I AGGCCT 1 cut(s) 1346
Eco24I GRGCYC 1 cut(s) 1683
Eco31I GGTCTC 1 cut(s) 1160
Eco47I GGWCC 5 cut(s) 676, 1140, 1828, 1939, 2018
Eco57I CTGAAG 5 cut(s) 256, 449, 524, 924, 1199
Eco72I CACGTG 1 cut(s) 235
Eco81I CCTNAGG 2 cut(s) 1001, 1172
Eco88I CYCGRG 1 cut(s) 1625
Eco91I GGTNACC 1 cut(s) 53
EcoO109I RGGNCCY 2 cut(s) 925, 1939
EcoO65I GGTNACC 1 cut(s) 53
EcoRII CCWGG 2 cut(s) 357, 1921
EcoT14I CCWWGG 2 cut(s) 939, 1187
EcoT38I GRGCYC 1 cut(s) 1683
ErhI CCWWGG 2 cut(s) 939, 1187
FalI AAGNNNNNCTT 6 cut(s) 80, 112, 546, 578, 872, 904
FaqI GGGAC 3 cut(s) 497, 1925, 1944
FauNDI CATATG 1 cut(s) 784
FbaI TGATCA 1 cut(s) 579
Fnu4HI GCNGC 6 cut(s) 420, 1597, 1712, 1906, 1909, 2005
FokI GGATG 5 cut(s) 164, 704, 983, 1607, 1749
FriOI GRGCYC 1 cut(s) 1683
Fsp4HI GCNGC 6 cut(s) 420, 1597, 1712, 1906, 1909, 2005
FspBI CTAG 4 cut(s) 5, 330, 633, 776
GlaI GCGC 1 cut(s) 1631
GluI GCNGC 6 cut(s) 420, 1597, 1712, 1906, 1909, 2005
GsaI CCCAGC 1 cut(s) 463
HaeII RGCGCY 1 cut(s) 1633
HaeIII GGCC 3 cut(s) 38, 926, 1346
HapII CCGG 5 cut(s) 656, 871, 1221, 1932, 1943
HhaI GCGC 1 cut(s) 1632
Hin6I GCGC 1 cut(s) 1630
HinP1I GCGC 1 cut(s) 1630
HincII GTYRAC 2 cut(s) 205, 411
HindII GTYRAC 2 cut(s) 205, 411
HindIII AAGCTT 3 cut(s) 626, 815, 1651
HpaII CCGG 5 cut(s) 656, 871, 1221, 1932, 1943
HphI GGTGA 3 cut(s) 47, 1288, 1421
Hpy166II GTNNAC 9 cut(s) 205, 232, 278, 288, 411, 1086, 1140, 1194, 1537
Hpy188I TCNGA 2 cut(s) 85, 1048
Hpy8I GTNNAC 9 cut(s) 205, 232, 278, 288, 411, 1086, 1140, 1194, 1537
HpyAV CCTTC 8 cut(s) 543, 757, 1357, 1447, 1792, 1819, 1837, 1930
HpyCH4III ACNGT 8 cut(s) 202, 285, 709, 715, 985, 1023, 1198, 1973
HpyCH4IV ACGT 2 cut(s) 234, 1467
HpyF10VI GCNNNNNNNGC 6 cut(s) 425, 559, 785, 1183, 1217, 1650
HpySE526I ACGT 2 cut(s) 234, 1467
HspAI GCGC 1 cut(s) 1630
KpnI GGTACC 1 cut(s) 225
KroI GCCGGC 1 cut(s) 1220
KroNI GCCGGC 1 cut(s) 1222
Ksp22I TGATCA 1 cut(s) 579
Kzo9I GATC 5 cut(s) 579, 606, 613, 930, 990
LmnI GCTCC 3 cut(s) 250, 456, 1678
Lsp1109I GCAGC 5 cut(s) 431, 1608, 1698, 1892, 1991
LweI GCATC 5 cut(s) 303, 674, 1173, 1233, 1629
MaeI CTAG 4 cut(s) 5, 330, 633, 776
MaeII ACGT 2 cut(s) 234, 1467
MaeIII GTNAC 6 cut(s) 46, 53, 709, 736, 1771, 1994
MalI GATC 5 cut(s) 581, 608, 615, 932, 992
MboI GATC 5 cut(s) 579, 606, 613, 930, 990
MboII GAAGA 9 cut(s) 517, 601, 1018, 1021, 1192, 1465, 1540, 1619, 1891
MfeI CAATTG 1 cut(s) 1125
MflI RGATCY 1 cut(s) 606
MhlI GDGCHC 5 cut(s) 234, 255, 290, 1683, 1749
MluCI AATT 7 cut(s) 105, 210, 492, 834, 1125, 1384, 1508
MlyI GAGTC 5 cut(s) 406, 519, 1091, 1429, 1679
MmeI TCCRAC 1 cut(s) 1332
MroNI GCCGGC 1 cut(s) 1220
MseI TTAA 4 cut(s) 294, 570, 819, 1503
MslI CAYNNNNRTG 3 cut(s) 126, 283, 2013
MspA1I CMGCKG 1 cut(s) 829
MspCI CTTAAG 2 cut(s) 293, 818
MspI CCGG 5 cut(s) 656, 871, 1221, 1932, 1943
MspR9I CCNGG 4 cut(s) 359, 1923, 1933, 1943
MunI CAATTG 1 cut(s) 1125
Mva1269I GAATGC 2 cut(s) 1313, 1759
MvaI CCWGG 2 cut(s) 359, 1923
MwoI GCNNNNNNNGC 6 cut(s) 425, 559, 785, 1183, 1217, 1650
NaeI GCCGGC 1 cut(s) 1222
NciI CCSGG 2 cut(s) 1933, 1943
NcoI CCATGG 1 cut(s) 1187
NdeI CATATG 1 cut(s) 784
NdeII GATC 5 cut(s) 579, 606, 613, 930, 990
NgoMIV GCCGGC 1 cut(s) 1220
NlaIV GGNNCC 6 cut(s) 223, 452, 970, 1122, 1680, 1941
NmuCI GTSAC 5 cut(s) 46, 53, 709, 736, 1771
NspI RCATGY 1 cut(s) 191
NspV TTCGAA 1 cut(s) 892
OliI CACNNNNGTG 1 cut(s) 283
PaeI GCATGC 1 cut(s) 191
PceI AGGCCT 1 cut(s) 1346
PcsI WCGNNNNNNNCGW 4 cut(s) 609, 618, 1044, 1464
PctI GAATGC 2 cut(s) 1313, 1759
PdiI GCCGGC 1 cut(s) 1222
PfeI GAWTC 8 cut(s) 152, 470, 823, 1324, 1426, 1564, 1669, 1882
PflFI GACNNNGTC 1 cut(s) 1688
PfoI TCCNGGA 1 cut(s) 1941
PkrI GCNGC 6 cut(s) 421, 1598, 1713, 1907, 1910, 2006
PleI GAGTC 5 cut(s) 406, 518, 1090, 1429, 1679
PmaCI CACGTG 1 cut(s) 235
PmlI CACGTG 1 cut(s) 235
PpsI GAGTC 5 cut(s) 406, 518, 1090, 1429, 1679
Ppu21I YACGTR 1 cut(s) 235
PpuMI RGGWCCY 1 cut(s) 1939
Psp5II RGGWCCY 1 cut(s) 1939
Psp6I CCWGG 2 cut(s) 357, 1921
PspCI CACGTG 1 cut(s) 235
PspEI GGTNACC 1 cut(s) 53
PspFI CCCAGC 1 cut(s) 459
PspGI CCWGG 2 cut(s) 357, 1921
PspN4I GGNNCC 6 cut(s) 223, 452, 970, 1122, 1680, 1941
PspPI GGNCC 6 cut(s) 676, 925, 1140, 1828, 1939, 2018
PspPPI RGGWCCY 1 cut(s) 1939
PstNI CAGNNNCTG 2 cut(s) 958, 1711
PsuI RGATCY 1 cut(s) 606
PsyI GACNNNGTC 1 cut(s) 1688
PvuII CAGCTG 1 cut(s) 829
RsaI GTAC 4 cut(s) 223, 277, 1193, 1466
RsaNI GTAC 4 cut(s) 222, 276, 1192, 1465
RseI CAYNNNNRTG 3 cut(s) 126, 283, 2013
SaqAI TTAA 4 cut(s) 294, 570, 819, 1503
SatI GCNGC 6 cut(s) 420, 1597, 1712, 1906, 1909, 2005
Sau3AI GATC 5 cut(s) 579, 606, 613, 930, 990
Sau96I GGNCC 6 cut(s) 676, 925, 1140, 1828, 1939, 2018
SchI GAGTC 5 cut(s) 406, 519, 1091, 1429, 1679
ScrFI CCNGG 4 cut(s) 359, 1923, 1933, 1943
SduI GDGCHC 5 cut(s) 234, 255, 290, 1683, 1749
SfaNI GCATC 5 cut(s) 303, 674, 1173, 1233, 1629
SfuI TTCGAA 1 cut(s) 892
SinI GGWCC 5 cut(s) 676, 1140, 1828, 1939, 2018
SmiMI CAYNNNNRTG 3 cut(s) 126, 283, 2013
SmlI CTYRAG 6 cut(s) 182, 293, 524, 563, 818, 878
SmoI CTYRAG 6 cut(s) 182, 293, 524, 563, 818, 878
SphI GCATGC 1 cut(s) 191
Sse9I AATT 7 cut(s) 105, 210, 492, 834, 1125, 1384, 1508
SseBI AGGCCT 1 cut(s) 1346
SsiI CCGC 3 cut(s) 860, 1742, 1909
SspMI CTAG 4 cut(s) 5, 330, 633, 776
StuI AGGCCT 1 cut(s) 1346
StyD4I CCNGG 4 cut(s) 357, 1921, 1931, 1941
StyI CCWWGG 2 cut(s) 939, 1187
TaaI ACNGT 8 cut(s) 202, 285, 709, 715, 985, 1023, 1198, 1973
TaiI ACGT 2 cut(s) 237, 1470
TaqI TCGA 8 cut(s) 603, 612, 621, 892, 993, 1038, 1131, 1299
TaqII GACCGA 1 cut(s) 1157
TasI AATT 7 cut(s) 105, 210, 492, 834, 1125, 1384, 1508
TatI WGTACW 1 cut(s) 275
TauI GCSGC 1 cut(s) 1911
TfiI GAWTC 8 cut(s) 152, 470, 823, 1324, 1426, 1564, 1669, 1882
Tru1I TTAA 4 cut(s) 294, 570, 819, 1503
Tru9I TTAA 4 cut(s) 294, 570, 819, 1503
TseFI GTSAC 5 cut(s) 46, 53, 709, 736, 1771
TseI GCWGC 5 cut(s) 419, 1596, 1711, 1905, 2004
Tsp45I GTSAC 5 cut(s) 46, 53, 709, 736, 1771
TspDTI ATGAA 6 cut(s) 378, 1015, 1222, 1295, 1466, 1967
Tth111I GACNNNGTC 1 cut(s) 1688
Vha464I CTTAAG 2 cut(s) 293, 818
VneI GTGCAC 2 cut(s) 230, 286
VpaK11BI GGWCC 5 cut(s) 676, 1140, 1828, 1939, 2018
XapI RAATTY 3 cut(s) 105, 834, 1384
XceI RCATGY 1 cut(s) 191
XspI CTAG 4 cut(s) 5, 330, 633, 776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.