RchiOBHm_Chr4g0389751

Sieve element occlusion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000511
Physical Location & Seq
Forward (+)
4739760 .. 4743526
3767 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36287

Sequence Viewer

Length: 2049 bp
ATGCTAGGCCTAGCGCACAATGTTGCTACCAAGGTAGCCACAGTAGTCCACACTACTCAGAAAACCATTGCAGGGGAGCTTAGTCTGTTTGCCATGTCTGACAAGAAGATCTTGGAGGAGATTTACACGACTCATGTCCATGCTGATGAATCCTTCGATGACGATTCTCTATTCGTCATTGTTGAGAACATCCTCAAGCGTGCAACCCAAAATGTTGATAAAATAGTGCAGGGTACTCAAGTGCATGTGGACAACATACAGGAGAAAACCCCCAAAGCCAGTTTCAGCGTGCCATTGTGCACACTAAAGGGAATCTCTTGCGAGATGCAATGCAAGCCTCCTGGTGATGAAATCGCCCACAACACAACAGTGGCAATACTCAACAAGCTGTCGGAGTATTCATGGGAAGCAAAGGCATCACTGACCCTAGCAGCTTTTGCTATGGAATATGGTGAATTCTGGCTCCTGGCGCAGCTTCGCGAATCAGACCACCTTGCCAAATCAATTGCAATCCTCAAACGAGTCCCTGTTCTCCTCAAGCAGTCAGAACTGCACAAGCGCAGGCAATCAATTCTTGAGCTTAACAATCTGATCAAGGCCATACTGCAAGTGATCGAATGCATTGACCAGTTCAATAAGTATTCCACTTATGACCCAAAAGATGTCCCCAATTTGTCTATAGCATTGGATCATATTCCGGTTAATGTCTATTGGGTTATCATCACTGTTGTTGCTTGTGCCACTAAGATCACTATACTCACTAGTGATGAGGACAAGGAGTATGATCTGGCCCCTTATTCTCAAAAAATCCACTATGTCCTTAACAAGCTAACGATTCAGCTAAGAGTTTGCAGGAAACAAATTGAGGAGGCAGAGACTTACAGAAGGATCCTGAAATTGTTCCGAACCCCTACTGAAATTATGGAGGTTTTCAAGGGATTAATATTTACAAAGGATAATGTCCTGCCACTCATCGATGGTTCAGCTAAGCAAACGGTTAAGATCGACATCCTAAGGAGAAAGAATGTGTTATTGTTCATTACCAGCCTAGACATCTCCGACAATGACATTTCGATTCTGAAACCGATCCACGAGTTCACAAAGAGAGACAATCAGTATAAGATTGTCTGGATTCCAATTGTGGAGCAATGGACTGATGACCTGAGAAAAAAGTTTGATATCCTGAAGAACAAGATGCCGTGGCTTACGGTGCAGTACTCTGGACCTATTGCAGGCATCAAGTTCATCAAGGAGGAGTGGAATTTCAAGGGTAAGCCTACAGTGGTGGTGATGAACCCACAAGGAAAGGTCGAACACCCTAACGCTCTCCACATGATTCGGTTATGGGGAGCCAAGGCCTTCCCTTTCACAGAGACAACAGAAGAAGAACTGTCACATTCTCATGCAGAAAAATGGGTTGGCTCCGTTGTTAAAGGAACTCACCCATATGTGCACACTTGGATCAAAGAGGATAAGTACATCTTCTTCTATGGCGGTAAAGACAACGAATGGATTCAGCAATTCACAAAGAAAGCGACTACCCTTGCAAATGATCCAATCTTCAAGGAAGCAAAGATTCACCTAGAGTTGGTATGCGTTGGAAAAGGCAGCAAAGGAGAAGATGACCATAGCGGTCTAGGCCGCTTCTGGACCAGTGTAGAGAGCCTATTCTTCACCAAAGACCACAAGCAGGTCGACTCGGTCAGTCAAGAAATCCAGAAGCTTCTCTCTTACAAAAACGAGAATGGATGGGCCGTGCTTAGCAAAGGGTCGACAGTGTTGGTCATAGGTCATGGTGTCTCGGTGTTGAAGGTGGTAGAGGACTTTGAGAAATGGAAGGACCATGTCAAGGAGAAAGGGTTTGAGTTTTGTTTCAAGGCCTATTATGGGCAGATTAGTCAGGCTAGTCGACCGTGCTGCCGTCTGGACATTCCAAGGTCTAACGGAAAGGTTCCAGAGAAGATGAAGTGCCCTGATTGCCAGCGTAGTATGGAGACTTTTATCAGTTACAAGTGTTGCCACGTTGATAGTCCTACTGCACATCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SEO_C SEO_N

Protein Analysis

682

Amino Acids

77.97

Weight (kDa)

8.19

Isoelectric Point (pI)

37.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SEO_N PF14576 33 - 304 3.7e-86 Sieve element occlusion N-terminus
SEO_C PF14577 475 - 540 5.6e-14 Sieve element occlusion C-terminus
SEO_C PF14577 548 - 674 7.3e-35 Sieve element occlusion C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000511)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02370 FvH4_4g02370 FvH4_4g02370 FvH4_4g02430 FvH4_4g02430 FvH4_4g02460 FvH4_4g02460 FvH4_4g02460 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_6g05920
malus_domestica MD00G1111000.v1.1 MD08G1225800.v1.1 MD13G1205700.v1.1 MD13G1205800.v1.1 MD13G1205900.v1.1 MD13G1206000.v1.1 MD16G1207500.v1.1 MD16G1207600.v1.1
prunus_persica Prupe.1G028400_v2.0.a1 Prupe.1G028500_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028900_v2.0.a1 Prupe.1G029000_v2.0.a1 Prupe.1G029100_v2.0.a1
pyrus_communis pycom08g19680 pycom08g19730 pycom16g17460 pycom16g17500
rosa_chinensis RchiOBHm_Chr4g0389751 RchiOBHm_Chr4g0389771 RchiOBHm_Chr4g0389791 RchiOBHm_Chr4g0389861 RchiOBHm_Chr4g0389881 RchiOBHm_Chr4g0389901 RchiOBHm_Chr4g0412411
rosa_laevigata RLG00000008288 RLG00000009901 RLG00000009945 RLG00000009954 RLG00000009956 RLG00000009957 RLG00000009958 RLG00000019246
rosa_multiflora Rmu_co8275125.1_g000001 Rmu_sc0002083.1_g000003 Rmu_sc0002083.1_g000025 Rmu_sc0002604.1_g000016 Rmu_sc0004336.1_g000031 Rmu_sc0010423.1_g000003
rosa_roxburghii Rroxscaffold_5G00335790 Rroxscaffold_5G00335850 Rroxscaffold_5G00335970 Rroxscaffold_5G00335990
rosa_rugosa Rorug03G0325100 Rorug03G0325300 Rorug03G0325500.1 Rorug03G0326800 Rorug03G0327000 Rorug04G0104400
rosa_samantha Rh4AG029900 Rh4AG030000 Rh4AG030100 Rh4AG030200 Rh4AG030600 Rh4AG172900 Rh4BG023200 Rh4BG023900 Rh4BG024000 Rh4BG024100 Rh4BG172200 Rh4DG023300 Rh4DG023800 Rh4DG023900 Rh4DG024000 Rh4DG151600
rosa_wichuraiana Rw1G002330 Rw1G002340 Rw4G002260 Rw4G002270 Rw4G002280 Rw4G002300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1681
AccI GTMKAC 3 cut(s) 1695, 1772, 1909
AccII CGCG 1 cut(s) 480
AciI CCGC 3 cut(s) 1494, 1632, 1642
AclWI GGATC 6 cut(s) 696, 883, 896, 1081, 1469, 1547
AcsI RAATTY 2 cut(s) 455, 1261
AcuI CTGAAG 1 cut(s) 1205
AfaI GTAC 3 cut(s) 235, 1217, 1478
AfiI CCNNNNNNNGG 6 cut(s) 72, 1232, 1588, 1690, 1849, 1887
AgsI TTSAA 6 cut(s) 634, 934, 1267, 1564, 1810, 1876
AhlI ACTAGT 1 cut(s) 761
AjnI CCWGG 2 cut(s) 340, 465
AjuI GAANNNNNNNTTGG 4 cut(s) 266, 298, 1401, 1433
AleI CACNNNNGTG 1 cut(s) 368
AluBI AGCT 9 cut(s) 79, 388, 434, 475, 580, 829, 841, 986, 1723
AluI AGCT 9 cut(s) 79, 388, 434, 475, 580, 829, 841, 986, 1723
Alw21I GWGCWC 2 cut(s) 302, 1455
Alw26I GTCTC 5 cut(s) 869, 1101, 1367, 1804, 1988
Alw44I GTGCAC 2 cut(s) 298, 1451
AlwI GGATC 6 cut(s) 696, 883, 896, 1081, 1469, 1547
AoxI GGCC 7 cut(s) 7, 597, 789, 1356, 1639, 1752, 1878
ApaLI GTGCAC 2 cut(s) 298, 1451
ApeKI GCWGC 4 cut(s) 431, 472, 1608, 1917
ApoI RAATTY 2 cut(s) 455, 1261
AseI ATTAAT 1 cut(s) 941
Asp700I GAANNNNTTC 2 cut(s) 899, 1512
AspLEI GCGC 3 cut(s) 16, 472, 561
AspS9I GGNCC 5 cut(s) 790, 1223, 1650, 1752, 1840
AsuHPI GGTGA 6 cut(s) 356, 464, 1300, 1433, 1571, 1666
AvaII GGWCC 3 cut(s) 1223, 1650, 1840
AxyI CCTNAGG 1 cut(s) 1013
BaeGI GKGCMC 3 cut(s) 302, 1455, 1973
BaeI ACNNNNGTAYC 2 cut(s) 225, 258
BamHI GGATCC 1 cut(s) 888
BarI GAAGNNNNNNTAC 2 cut(s) 1469, 1501
BauI CACGAG 1 cut(s) 1091
Bbv12I GWGCWC 2 cut(s) 302, 1455
BbvI GCAGC 4 cut(s) 443, 484, 1620, 1904
BccI CCATC 2 cut(s) 971, 1743
BceAI ACGGC 3 cut(s) 1183, 1739, 1905
BcgI CGANNNNNNTGC 2 cut(s) 1899, 1933
BciT130I CCWGG 2 cut(s) 342, 467
BclI TGATCA 1 cut(s) 591
BcoDI GTCTC 5 cut(s) 869, 1101, 1367, 1804, 1988
BcuI ACTAGT 1 cut(s) 761
BfaI CTAG 8 cut(s) 5, 11, 428, 762, 1049, 1583, 1637, 1905
BfmI CTRYAG 2 cut(s) 678, 1278
BfuAI ACCTGC 1 cut(s) 1681
BglII AGATCT 1 cut(s) 108
BisI GCNGC 5 cut(s) 432, 473, 1609, 1642, 1918
BlpI GCTNAGC 2 cut(s) 987, 1760
BlsI GCNGC 5 cut(s) 433, 474, 1610, 1643, 1919
BmcAI AGTACT 1 cut(s) 1217
Bme1390I CCNGG 2 cut(s) 342, 467
Bme18I GGWCC 3 cut(s) 1223, 1650, 1840
BmgT120I GGNCC 5 cut(s) 790, 1223, 1650, 1752, 1840
BmiI GGNNCC 6 cut(s) 464, 792, 890, 1351, 1423, 1953
BmrFI CCNGG 2 cut(s) 342, 467
BmsI GCATC 4 cut(s) 315, 425, 1185, 1245
BoxI GACNNNNGTC 1 cut(s) 134
Bpu1102I GCTNAGC 2 cut(s) 987, 1760
BpuEI CTTGAG 4 cut(s) 179, 222, 521, 596
Bsa29I ATCGAT 1 cut(s) 975
BsaBI GATNNNNATC 1 cut(s) 1007
BsaJI CCNNGG 4 cut(s) 30, 1199, 1353, 1934
BsaWI WCCGGW 1 cut(s) 697
BsaXI ACNNNNNCTCC 2 cut(s) 1844, 1874
Bsc4I CCNNNNNNNGG 6 cut(s) 72, 1232, 1588, 1690, 1849, 1887
Bse1I ACTGG 3 cut(s) 279, 628, 1653
Bse21I CCTNAGG 1 cut(s) 1013
Bse3DI GCAATG 3 cut(s) 66, 335, 1154
Bse8I GATNNNNATC 1 cut(s) 1007
BseBI CCWGG 2 cut(s) 342, 467
BseCI ATCGAT 1 cut(s) 975
BseDI CCNNGG 4 cut(s) 30, 1199, 1353, 1934
BseGI GGATG 3 cut(s) 189, 1008, 1754
BseJI GATNNNNATC 1 cut(s) 1007
BseLI CCNNNNNNNGG 6 cut(s) 72, 1232, 1588, 1690, 1849, 1887
BseMI GCAATG 3 cut(s) 66, 335, 1154
BseMII CTCAG 2 cut(s) 71, 1154
BseNI ACTGG 3 cut(s) 279, 628, 1653
BseRI GAGGAG 4 cut(s) 131, 524, 881, 1268
BseSI GKGCMC 3 cut(s) 302, 1455, 1973
BseXI GCAGC 4 cut(s) 443, 484, 1620, 1904
BsgI GTGCAG 4 cut(s) 248, 536, 1232, 2022
Bsh1236I CGCG 1 cut(s) 480
Bsh1285I CGRYCG 1 cut(s) 1913
BshFI GGCC 7 cut(s) 9, 599, 791, 1358, 1641, 1754, 1880
BshVI ATCGAT 1 cut(s) 975
BsiEI CGRYCG 1 cut(s) 1913
BsiHKAI GWGCWC 2 cut(s) 302, 1455
BsiSI CCGG 1 cut(s) 698
BslFI GGGAC 2 cut(s) 509, 650
BslI CCNNNNNNNGG 6 cut(s) 72, 1232, 1588, 1690, 1849, 1887
BsmAI GTCTC 5 cut(s) 869, 1101, 1367, 1804, 1988
BsmFI GGGAC 2 cut(s) 509, 650
BsmI GAATGC 1 cut(s) 623
BsnI GGCC 7 cut(s) 9, 599, 791, 1358, 1641, 1754, 1880
Bsp1286I GDGCHC 3 cut(s) 302, 1455, 1973
Bsp1720I GCTNAGC 2 cut(s) 987, 1760
Bsp68I TCGCGA 1 cut(s) 480
BspACI CCGC 3 cut(s) 1494, 1632, 1642
BspANI GGCC 7 cut(s) 9, 599, 791, 1358, 1641, 1754, 1880
BspCNI CTCAG 2 cut(s) 70, 1155
BspDI ATCGAT 1 cut(s) 975
BspFNI CGCG 1 cut(s) 480
BspLI GGNNCC 6 cut(s) 464, 792, 890, 1351, 1423, 1953
BspMI ACCTGC 1 cut(s) 1681
BspPI GGATC 6 cut(s) 696, 883, 896, 1081, 1469, 1547
BsrDI GCAATG 3 cut(s) 66, 335, 1154
BsrI ACTGG 3 cut(s) 279, 628, 1653
BssECI CCNNGG 4 cut(s) 30, 1199, 1353, 1934
BssSI CACGAG 1 cut(s) 1091
BssT1I CCWWGG 3 cut(s) 30, 1353, 1934
Bst2BI CACGAG 1 cut(s) 1091
Bst2UI CCWGG 2 cut(s) 342, 467
Bst4CI ACNGT 9 cut(s) 43, 370, 727, 997, 1210, 1282, 1392, 1777, 1914
BstAPI GCANNNNNTGC 1 cut(s) 437
BstC8I GCNNGC 6 cut(s) 201, 290, 335, 563, 1234, 1982
BstDEI CTNAG 8 cut(s) 57, 80, 744, 842, 987, 1013, 1163, 1760
BstDSI CCRYGG 1 cut(s) 1199
BstENI CCTNNNNNAGG 1 cut(s) 1230
BstF5I GGATG 3 cut(s) 189, 1008, 1754
BstFNI CGCG 1 cut(s) 480
BstHHI GCGC 3 cut(s) 16, 472, 561
BstMAI GTCTC 5 cut(s) 869, 1101, 1367, 1804, 1988
BstMCI CGRYCG 1 cut(s) 1913
BstMWI GCNNNNNNNGC 6 cut(s) 334, 437, 469, 1210, 1638, 1977
BstNI CCWGG 2 cut(s) 342, 467
BstNSI RCATGY 1 cut(s) 248
BstPAI GACNNNNGTC 1 cut(s) 134
BstSCI CCNGG 2 cut(s) 340, 465
BstSFI CTRYAG 2 cut(s) 678, 1278
BstSLI GKGCMC 3 cut(s) 302, 1455, 1973
BstUI CGCG 1 cut(s) 480
BstV1I GCAGC 4 cut(s) 443, 484, 1620, 1904
BstX2I RGATCY 2 cut(s) 108, 888
BstYI RGATCY 2 cut(s) 108, 888
Bsu15I ATCGAT 1 cut(s) 975
Bsu36I CCTNAGG 1 cut(s) 1013
BsuRI GGCC 7 cut(s) 9, 599, 791, 1358, 1641, 1754, 1880
BsuTUI ATCGAT 1 cut(s) 975
BtgI CCRYGG 1 cut(s) 1199
BtsCI GGATG 3 cut(s) 189, 1008, 1754
BtsIMutI CAGTG 6 cut(s) 375, 419, 723, 1287, 1660, 1782
BtuMI TCGCGA 1 cut(s) 480
BveI ACCTGC 1 cut(s) 1681
Cac8I GCNNGC 6 cut(s) 201, 290, 335, 563, 1234, 1982
CfoI GCGC 3 cut(s) 16, 472, 561
Cfr13I GGNCC 5 cut(s) 790, 1223, 1650, 1752, 1840
ClaI ATCGAT 1 cut(s) 975
Csp6I GTAC 3 cut(s) 234, 1216, 1477
CviAII CATG 9 cut(s) 94, 134, 140, 245, 402, 1333, 1403, 1793, 1844
CviQI GTAC 3 cut(s) 234, 1216, 1477
DdeI CTNAG 8 cut(s) 57, 80, 744, 842, 987, 1013, 1163, 1760
Eco130I CCWWGG 3 cut(s) 30, 1353, 1934
Eco147I AGGCCT 3 cut(s) 9, 1358, 1880
Eco32I GATATC 1 cut(s) 1180
Eco47I GGWCC 3 cut(s) 1223, 1650, 1840
Eco57I CTGAAG 1 cut(s) 1205
Eco81I CCTNAGG 1 cut(s) 1013
EcoNI CCTNNNNNAGG 1 cut(s) 1230
EcoRI GAATTC 1 cut(s) 455
EcoRII CCWGG 2 cut(s) 340, 465
EcoRV GATATC 1 cut(s) 1180
EcoT14I CCWWGG 3 cut(s) 30, 1353, 1934
EcoT22I ATGCAT 1 cut(s) 623
ErhI CCWWGG 3 cut(s) 30, 1353, 1934
FaeI CATG 9 cut(s) 97, 137, 143, 248, 405, 1336, 1406, 1796, 1847
FalI AAGNNNNNCTT 4 cut(s) 95, 127, 1466, 1498
FaqI GGGAC 2 cut(s) 509, 650
FatI CATG 9 cut(s) 93, 133, 139, 244, 401, 1332, 1402, 1792, 1843
FauNDI CATATG 1 cut(s) 1447
FbaI TGATCA 1 cut(s) 591
FblI GTMKAC 3 cut(s) 1695, 1772, 1909
Fnu4HI GCNGC 5 cut(s) 432, 473, 1609, 1642, 1918
FokI GGATG 3 cut(s) 176, 995, 1761
Fsp4HI GCNGC 5 cut(s) 432, 473, 1609, 1642, 1918
FspBI CTAG 8 cut(s) 5, 11, 428, 762, 1049, 1583, 1637, 1905
GlaI GCGC 3 cut(s) 15, 471, 560
GluI GCNGC 5 cut(s) 432, 473, 1609, 1642, 1918
HaeIII GGCC 7 cut(s) 9, 599, 791, 1358, 1641, 1754, 1880
HapII CCGG 1 cut(s) 698
HhaI GCGC 3 cut(s) 16, 472, 561
Hin1II CATG 9 cut(s) 97, 137, 143, 248, 405, 1336, 1406, 1796, 1847
Hin6I GCGC 3 cut(s) 14, 470, 559
HinP1I GCGC 3 cut(s) 14, 470, 559
HincII GTYRAC 3 cut(s) 1696, 1773, 1910
HindII GTYRAC 3 cut(s) 1696, 1773, 1910
HindIII AAGCTT 1 cut(s) 1721
HpaII CCGG 1 cut(s) 698
HphI GGTGA 6 cut(s) 356, 464, 1300, 1433, 1571, 1666
Hpy166II GTNNAC 8 cut(s) 49, 250, 300, 1098, 1453, 1696, 1773, 1910
Hpy188I TCNGA 9 cut(s) 60, 100, 394, 487, 547, 591, 905, 1060, 1080
Hpy8I GTNNAC 8 cut(s) 49, 250, 300, 1098, 1453, 1696, 1773, 1910
HpyAV CCTTC 5 cut(s) 163, 879, 1369, 1804, 1831
HpyCH4III ACNGT 9 cut(s) 43, 370, 727, 997, 1210, 1282, 1392, 1777, 1914
HpyCH4IV ACGT 1 cut(s) 2022
HpyF10VI GCNNNNNNNGC 6 cut(s) 334, 437, 469, 1210, 1638, 1977
HpyF3I CTNAG 8 cut(s) 57, 80, 744, 842, 987, 1013, 1163, 1760
HpySE526I ACGT 1 cut(s) 2022
Hsp92II CATG 9 cut(s) 97, 137, 143, 248, 405, 1336, 1406, 1796, 1847
HspAI GCGC 3 cut(s) 14, 470, 559
Ksp22I TGATCA 1 cut(s) 591
LmnI GCTCC 5 cut(s) 76, 468, 1144, 1349, 1427
Lsp1109I GCAGC 4 cut(s) 443, 484, 1620, 1904
LweI GCATC 4 cut(s) 315, 425, 1185, 1245
MaeI CTAG 8 cut(s) 5, 11, 428, 762, 1049, 1583, 1637, 1905
MaeII ACGT 1 cut(s) 2022
MaeIII GTNAC 2 cut(s) 1392, 2006
MfeI CAATTG 2 cut(s) 504, 1137
MflI RGATCY 2 cut(s) 108, 888
MhlI GDGCHC 3 cut(s) 302, 1455, 1973
MlyI GAGTC 3 cut(s) 124, 531, 1691
MmeI TCCRAC 3 cut(s) 372, 1083, 1579
Mph1103I ATGCAT 1 cut(s) 623
MroXI GAANNNNTTC 2 cut(s) 899, 1512
MseI TTAA 7 cut(s) 582, 702, 822, 941, 999, 1431, 2047
MslI CAYNNNNRTG 5 cut(s) 138, 144, 368, 1401, 1446
MspI CCGG 1 cut(s) 698
MspR9I CCNGG 2 cut(s) 342, 467
MunI CAATTG 2 cut(s) 504, 1137
Mva1269I GAATGC 1 cut(s) 623
MvaI CCWGG 2 cut(s) 342, 467
MvnI CGCG 1 cut(s) 480
MwoI GCNNNNNNNGC 6 cut(s) 334, 437, 469, 1210, 1638, 1977
NdeI CATATG 1 cut(s) 1447
NlaIII CATG 9 cut(s) 97, 137, 143, 248, 405, 1336, 1406, 1796, 1847
NlaIV GGNNCC 6 cut(s) 464, 792, 890, 1351, 1423, 1953
NmuCI GTSAC 1 cut(s) 1392
NruI TCGCGA 1 cut(s) 480
NsiI ATGCAT 1 cut(s) 623
NspI RCATGY 1 cut(s) 248
OliI CACNNNNGTG 1 cut(s) 368
PceI AGGCCT 3 cut(s) 9, 1358, 1880
PctI GAATGC 1 cut(s) 623
PdmI GAANNNNTTC 2 cut(s) 899, 1512
PflFI GACNNNGTC 2 cut(s) 1700, 1844
PkrI GCNGC 5 cut(s) 433, 474, 1610, 1643, 1919
PleI GAGTC 3 cut(s) 124, 530, 1691
PpsI GAGTC 3 cut(s) 124, 530, 1691
PshAI GACNNNNGTC 1 cut(s) 134
PshBI ATTAAT 1 cut(s) 941
Psp6I CCWGG 2 cut(s) 340, 465
PspGI CCWGG 2 cut(s) 340, 465
PspN4I GGNNCC 6 cut(s) 464, 792, 890, 1351, 1423, 1953
PspPI GGNCC 5 cut(s) 790, 1223, 1650, 1752, 1840
PsuI RGATCY 2 cut(s) 108, 888
PsyI GACNNNGTC 2 cut(s) 1700, 1844
RruI TCGCGA 1 cut(s) 480
RsaI GTAC 3 cut(s) 235, 1217, 1478
RsaNI GTAC 3 cut(s) 234, 1216, 1477
RseI CAYNNNNRTG 5 cut(s) 138, 144, 368, 1401, 1446
SalI GTCGAC 3 cut(s) 1694, 1771, 1908
SaqAI TTAA 7 cut(s) 582, 702, 822, 941, 999, 1431, 2047
SatI GCNGC 5 cut(s) 432, 473, 1609, 1642, 1918
Sau96I GGNCC 5 cut(s) 790, 1223, 1650, 1752, 1840
ScaI AGTACT 1 cut(s) 1217
SchI GAGTC 3 cut(s) 124, 531, 1691
ScrFI CCNGG 2 cut(s) 342, 467
SduI GDGCHC 3 cut(s) 302, 1455, 1973
SfaNI GCATC 4 cut(s) 315, 425, 1185, 1245
SfcI CTRYAG 2 cut(s) 678, 1278
SinI GGWCC 3 cut(s) 1223, 1650, 1840
SmiMI CAYNNNNRTG 5 cut(s) 138, 144, 368, 1401, 1446
SmlI CTYRAG 4 cut(s) 194, 237, 536, 575
SmoI CTYRAG 4 cut(s) 194, 237, 536, 575
SpeI ACTAGT 1 cut(s) 761
SseBI AGGCCT 3 cut(s) 9, 1358, 1880
SsiI CCGC 3 cut(s) 1494, 1632, 1642
SspI AATATT 1 cut(s) 945
SspMI CTAG 8 cut(s) 5, 11, 428, 762, 1049, 1583, 1637, 1905
StuI AGGCCT 3 cut(s) 9, 1358, 1880
StyD4I CCNGG 2 cut(s) 340, 465
StyI CCWWGG 3 cut(s) 30, 1353, 1934
TaaI ACNGT 9 cut(s) 43, 370, 727, 997, 1210, 1282, 1392, 1777, 1914
TaiI ACGT 1 cut(s) 2025
TaqI TCGA 9 cut(s) 156, 615, 975, 1005, 1073, 1311, 1695, 1772, 1909
TaqII GACCGA 1 cut(s) 1690
TatI WGTACW 2 cut(s) 1215, 1476
TauI GCSGC 1 cut(s) 1644
Tru1I TTAA 7 cut(s) 582, 702, 822, 941, 999, 1431, 2047
Tru9I TTAA 7 cut(s) 582, 702, 822, 941, 999, 1431, 2047
TscAI CASTG 6 cut(s) 375, 426, 730, 1287, 1660, 1782
TseFI GTSAC 1 cut(s) 1392
TseI GCWGC 4 cut(s) 431, 472, 1608, 1917
Tsp45I GTSAC 1 cut(s) 1392
TspDTI ATGAA 7 cut(s) 162, 363, 390, 1027, 1234, 1307, 1979
TspGWI ACGGA 2 cut(s) 1414, 1959
TspRI CASTG 6 cut(s) 375, 426, 730, 1287, 1660, 1782
Tth111I GACNNNGTC 2 cut(s) 1700, 1844
VneI GTGCAC 2 cut(s) 298, 1451
VpaK11BI GGWCC 3 cut(s) 1223, 1650, 1840
VspI ATTAAT 1 cut(s) 941
XagI CCTNNNNNAGG 1 cut(s) 1230
XapI RAATTY 2 cut(s) 455, 1261
XceI RCATGY 1 cut(s) 248
XmiI GTMKAC 3 cut(s) 1695, 1772, 1909
XmnI GAANNNNTTC 2 cut(s) 899, 1512
XspI CTAG 8 cut(s) 5, 11, 428, 762, 1049, 1583, 1637, 1905
ZrmI AGTACT 1 cut(s) 1217
Zsp2I ATGCAT 1 cut(s) 623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.