RLG00000009956

Sieve element occlusion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000511
Physical Location & Seq
Reverse (-)
61049533 .. 61052900
3368 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009956

Sequence Viewer

Length: 1752 bp
ATGCTAGGCCTAGCGCGCAATGTTACTACCAAGGTAGCCTCAGTAGTCCACACTACTCAGAAAACCATTGCAGGGGAGGTTAGCCTGTTTGCCATGTCTGACAAGAAGATCTTAGAGGAGATTTACACGACTCATGTCCATGTTGATGAATCCTTTGATGACGATTCTCTCTTCGTCATTGTTGAGAACATCCTCAAGCGTGCAACCCAAAATGTTGATAAAATAGTGCAGGGCACTCAAGTGCATGTGGACAACATACAGGAGAAAACCCCCAAAGCCAGTTTCAGCGTGCCATTGTGCACGCTAAAAGGAATCTCCTGCAAGATGCAATGCAAGCCTCCTAGTGACGAAATCGCCCACAACACAACAGTGGCAATACTCAACAAGCTGTCAGAGTATTCATGGGAAGCAAAGGCATCACTGACCCTAGCAGCTTTTGCTATGGAATATGGTGAATTCTGGCTCCTGGCGCAGCTTCGCGAATCAGATCCCCTCGCCAAATCAATTGCAATCCTCAAACGAGTCCCTGTTCTCCTCAAGCCGTCAGAGCTGCACAAGCGCAGGCAATCAATTCTTGAGCTTAACAATCTGATCAAGGCCATACTGCAAGTGATCGCATGCATCGACCAGTTCAATAAGTATTCCACTTATGACCCAAAAGATGTCCCCTATTTGTCTATAGCATTGGATCATATTCCGGTTAAGATCGACATCCTAAGGAGAAAGAATGTGTTATGGTTCATTACCAGCCTAGACGTCTCCGACGATGACATTTCGATTCTGAAACCGATCCATGAGTTCACAAAGAGAGACAATCAGTATAAGATTGTCTGGATTCCAATTGTGGAGCAATGGACTGATGACCTAAGAAAAAAGTTTGATATCCTGAAGAACAGGATGCCGTGGCTTACGGTGCAGTACTCTGGACCTATTGCAGGCATCAAGTTCATCAAGGAGGAGTGGAATTTCAAGGGTAAGCCAACAGTGGTGGTGATGAACCCACAAGGAAAGGTCGAACACCCTAACGCTCTCCACATGATTCGGGTATGGCGAGACAAGGCCTTCCCTTTCACAAAGACAAAAGAAGAAGAACTGTCACATTCTCATGCAAAAAAATGGGTTGGCTCCGTTGTTGAAGGAATTCACCCATCTGTGCCCACTTGGATCAAAGAGGATAAGTACATCTTCTTCTATGGTGGTAAAGACAACGAATGGATTCAGCAATTCACAAAGAAAGCAATTGCCCTTGCAAATGATCCAATCTTCAAGGAAGCAAAGATTCACCTAGAGTTGGTCTGCGTTGGAAAAGGAAGCAAAGGAGAAGATGACCATGGCGGTCTAAGCCGCTTCTGGACCAGTGTTGAGAGCCTGTTCTTCACCAAAGACCACAAGCAAGTCGACTCGGTCAGTCAAGAAATCCAGAAGCTTCTCTCTTACAAAAACGAGAGTGGATGGGCCGTGCTTAGCAAAGGGTCGACTGTGTTGGTCACAGGTCATGGTGTCTCAGTGTTGAAGGTGCTAGAGGACTTTGAGAAATGGAAGGACCATGTCAAGGAGAAAGGGTTTGAGTTTTGTTTCAAGGCCTACTATGGGAAGATTAGTCAGGCTAGTCGACCTTGCTGCCGTCTGGACATTCCGGGGTCTAACGGAAAGGTTCCAGAGGAGATGAAGTGCCCTGATTGCCACCGTAGTATGGAGACTTTTATCAGTTACAAGTGTTGCCACATTGATGGTCCTACTGCACATCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SEO_C SEO_N

Protein Analysis

584

Amino Acids

66.47

Weight (kDa)

8.49

Isoelectric Point (pI)

34.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SEO_N PF14576 33 - 235 1.2e-63 Sieve element occlusion N-terminus
SEO_C PF14577 374 - 441 7.6e-15 Sieve element occlusion C-terminus
SEO_C PF14577 449 - 575 1.2e-35 Sieve element occlusion C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000511)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02370 FvH4_4g02370 FvH4_4g02370 FvH4_4g02430 FvH4_4g02430 FvH4_4g02460 FvH4_4g02460 FvH4_4g02460 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_6g05920
malus_domestica MD00G1111000.v1.1 MD08G1225800.v1.1 MD13G1205700.v1.1 MD13G1205800.v1.1 MD13G1205900.v1.1 MD13G1206000.v1.1 MD16G1207500.v1.1 MD16G1207600.v1.1
prunus_persica Prupe.1G028400_v2.0.a1 Prupe.1G028500_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028900_v2.0.a1 Prupe.1G029000_v2.0.a1 Prupe.1G029100_v2.0.a1
pyrus_communis pycom08g19680 pycom08g19730 pycom16g17460 pycom16g17500
rosa_chinensis RchiOBHm_Chr4g0389751 RchiOBHm_Chr4g0389771 RchiOBHm_Chr4g0389791 RchiOBHm_Chr4g0389861 RchiOBHm_Chr4g0389881 RchiOBHm_Chr4g0389901 RchiOBHm_Chr4g0412411
rosa_laevigata RLG00000008288 RLG00000009901 RLG00000009945 RLG00000009954 RLG00000009956 RLG00000009957 RLG00000009958 RLG00000019246
rosa_multiflora Rmu_co8275125.1_g000001 Rmu_sc0002083.1_g000003 Rmu_sc0002083.1_g000025 Rmu_sc0002604.1_g000016 Rmu_sc0004336.1_g000031 Rmu_sc0010423.1_g000003
rosa_roxburghii Rroxscaffold_5G00335790 Rroxscaffold_5G00335850 Rroxscaffold_5G00335970 Rroxscaffold_5G00335990
rosa_rugosa Rorug03G0325100 Rorug03G0325300 Rorug03G0325500.1 Rorug03G0326800 Rorug03G0327000 Rorug04G0104400
rosa_samantha Rh4AG029900 Rh4AG030000 Rh4AG030100 Rh4AG030200 Rh4AG030600 Rh4AG172900 Rh4BG023200 Rh4BG023900 Rh4BG024000 Rh4BG024100 Rh4BG172200 Rh4DG023300 Rh4DG023800 Rh4DG023900 Rh4DG024000 Rh4DG151600
rosa_wichuraiana Rw1G002330 Rw1G002340 Rw4G002260 Rw4G002270 Rw4G002280 Rw4G002300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 759
AccI GTMKAC 3 cut(s) 1398, 1475, 1612
AccII CGCG 2 cut(s) 16, 480
AciI CCGC 2 cut(s) 1335, 1345
AclWI GGATC 5 cut(s) 482, 696, 784, 1172, 1250
AcsI RAATTY 3 cut(s) 455, 964, 1140
AcuI CTGAAG 1 cut(s) 908
AcyI GRCGYC 1 cut(s) 756
AfaI GTAC 2 cut(s) 920, 1181
AfiI CCNNNNNNNGG 6 cut(s) 72, 935, 1291, 1552, 1590, 1693
AgsI TTSAA 6 cut(s) 634, 970, 1136, 1267, 1513, 1579
AjnI CCWGG 1 cut(s) 465
AjuI GAANNNNNNNTTGG 2 cut(s) 266, 298
AleI CACNNNNGTG 2 cut(s) 239, 368
AluBI AGCT 6 cut(s) 388, 434, 475, 550, 580, 1426
AluI AGCT 6 cut(s) 388, 434, 475, 550, 580, 1426
Alw21I GWGCWC 1 cut(s) 302
Alw26I GTCTC 5 cut(s) 763, 804, 1047, 1507, 1691
Alw44I GTGCAC 1 cut(s) 298
AlwI GGATC 5 cut(s) 482, 696, 784, 1172, 1250
AoxI GGCC 5 cut(s) 7, 597, 1059, 1455, 1581
ApaLI GTGCAC 1 cut(s) 298
ApeKI GCWGC 4 cut(s) 431, 472, 550, 1620
ApoI RAATTY 3 cut(s) 455, 964, 1140
Asp700I GAANNNNTTC 2 cut(s) 1140, 1215
AspLEI GCGC 4 cut(s) 16, 18, 472, 561
AspS9I GGNCC 5 cut(s) 926, 1353, 1455, 1543, 1733
AsuC2I CCSGG 1 cut(s) 1638
AsuHPI GGTGA 5 cut(s) 464, 1003, 1136, 1274, 1369
AvaII GGWCC 4 cut(s) 926, 1353, 1543, 1733
AxyI CCTNAGG 1 cut(s) 716
BaeGI GKGCMC 4 cut(s) 236, 302, 1158, 1676
BarI GAAGNNNNNNTAC 2 cut(s) 1172, 1204
Bbv12I GWGCWC 1 cut(s) 302
BbvI GCAGC 4 cut(s) 443, 484, 537, 1607
BccI CCATC 3 cut(s) 1156, 1446, 1724
BceAI ACGGC 4 cut(s) 526, 886, 1442, 1608
BcgI CGANNNNNNTGC 2 cut(s) 1602, 1636
BciT130I CCWGG 1 cut(s) 467
BclI TGATCA 1 cut(s) 591
BcnI CCSGG 1 cut(s) 1638
BcoDI GTCTC 5 cut(s) 763, 804, 1047, 1507, 1691
BfaI CTAG 8 cut(s) 5, 11, 342, 428, 752, 1286, 1520, 1608
BfmI CTRYAG 1 cut(s) 678
BglII AGATCT 1 cut(s) 108
BisI GCNGC 5 cut(s) 432, 473, 551, 1345, 1621
BlpI GCTNAGC 1 cut(s) 1463
BlsI GCNGC 5 cut(s) 433, 474, 552, 1346, 1622
BmcAI AGTACT 1 cut(s) 920
Bme1390I CCNGG 2 cut(s) 467, 1638
Bme18I GGWCC 4 cut(s) 926, 1353, 1543, 1733
BmgT120I GGNCC 5 cut(s) 926, 1353, 1455, 1543, 1733
BmiI GGNNCC 3 cut(s) 464, 1126, 1656
BmrFI CCNGG 2 cut(s) 467, 1638
BmsI GCATC 5 cut(s) 315, 425, 630, 888, 948
BoxI GACNNNNGTC 1 cut(s) 134
Bpu1102I GCTNAGC 1 cut(s) 1463
BpuEI CTTGAG 4 cut(s) 179, 222, 521, 596
BpuMI CCSGG 1 cut(s) 1638
BsaBI GATNNNNATC 1 cut(s) 710
BsaHI GRCGYC 1 cut(s) 756
BsaJI CCNNGG 4 cut(s) 30, 902, 1330, 1637
BsaWI WCCGGW 1 cut(s) 697
BsaXI ACNNNNNCTCC 4 cut(s) 1547, 1577, 1655, 1685
Bsc4I CCNNNNNNNGG 6 cut(s) 72, 935, 1291, 1552, 1590, 1693
Bse1I ACTGG 3 cut(s) 279, 628, 1356
Bse21I CCTNAGG 1 cut(s) 716
Bse3DI GCAATG 4 cut(s) 25, 66, 335, 857
Bse8I GATNNNNATC 1 cut(s) 710
BseBI CCWGG 1 cut(s) 467
BseDI CCNNGG 4 cut(s) 30, 902, 1330, 1637
BseGI GGATG 4 cut(s) 189, 711, 903, 1457
BseJI GATNNNNATC 1 cut(s) 710
BseLI CCNNNNNNNGG 6 cut(s) 72, 935, 1291, 1552, 1590, 1693
BseMI GCAATG 4 cut(s) 25, 66, 335, 857
BseMII CTCAG 3 cut(s) 54, 71, 1518
BseNI ACTGG 3 cut(s) 279, 628, 1356
BsePI GCGCGC 1 cut(s) 14
BseRI GAGGAG 4 cut(s) 131, 524, 971, 1676
BseSI GKGCMC 4 cut(s) 236, 302, 1158, 1676
BseXI GCAGC 4 cut(s) 443, 484, 537, 1607
BsgI GTGCAG 4 cut(s) 248, 536, 935, 1725
Bsh1236I CGCG 2 cut(s) 16, 480
BshFI GGCC 5 cut(s) 9, 599, 1061, 1457, 1583
BsiHKAI GWGCWC 1 cut(s) 302
BsiSI CCGG 2 cut(s) 698, 1637
BslFI GGGAC 2 cut(s) 509, 650
BslI CCNNNNNNNGG 6 cut(s) 72, 935, 1291, 1552, 1590, 1693
BsmAI GTCTC 5 cut(s) 763, 804, 1047, 1507, 1691
BsmBI CGTCTC 1 cut(s) 763
BsmFI GGGAC 2 cut(s) 509, 650
BsnI GGCC 5 cut(s) 9, 599, 1061, 1457, 1583
Bsp1286I GDGCHC 4 cut(s) 236, 302, 1158, 1676
Bsp143I GATC 9 cut(s) 108, 487, 591, 612, 688, 705, 789, 1164, 1255
Bsp1720I GCTNAGC 1 cut(s) 1463
Bsp19I CCATGG 1 cut(s) 1330
Bsp68I TCGCGA 1 cut(s) 480
BspACI CCGC 2 cut(s) 1335, 1345
BspANI GGCC 5 cut(s) 9, 599, 1061, 1457, 1583
BspCNI CTCAG 3 cut(s) 53, 70, 1517
BspFNI CGCG 2 cut(s) 16, 480
BspLI GGNNCC 3 cut(s) 464, 1126, 1656
BspPI GGATC 5 cut(s) 482, 696, 784, 1172, 1250
BsrDI GCAATG 4 cut(s) 25, 66, 335, 857
BsrI ACTGG 3 cut(s) 279, 628, 1356
BssECI CCNNGG 4 cut(s) 30, 902, 1330, 1637
BssHII GCGCGC 1 cut(s) 14
BssMI GATC 9 cut(s) 108, 487, 591, 612, 688, 705, 789, 1164, 1255
BssNI GRCGYC 1 cut(s) 756
BssT1I CCWWGG 2 cut(s) 30, 1330
Bst2UI CCWGG 1 cut(s) 467
Bst4CI ACNGT 6 cut(s) 370, 913, 985, 1095, 1480, 1688
Bst6I CTCTTC 1 cut(s) 176
BstACI GRCGYC 1 cut(s) 756
BstAPI GCANNNNNTGC 1 cut(s) 437
BstC8I GCNNGC 8 cut(s) 16, 201, 290, 302, 335, 563, 619, 937
BstDEI CTNAG 8 cut(s) 40, 57, 112, 716, 866, 1340, 1463, 1504
BstDSI CCRYGG 2 cut(s) 902, 1330
BstENI CCTNNNNNAGG 1 cut(s) 933
BstF5I GGATG 4 cut(s) 189, 711, 903, 1457
BstFNI CGCG 2 cut(s) 16, 480
BstHHI GCGC 4 cut(s) 16, 18, 472, 561
BstKTI GATC 9 cut(s) 111, 490, 594, 615, 691, 708, 792, 1167, 1258
BstMAI GTCTC 5 cut(s) 763, 804, 1047, 1507, 1691
BstMBI GATC 9 cut(s) 108, 487, 591, 612, 688, 705, 789, 1164, 1255
BstMWI GCNNNNNNNGC 9 cut(s) 15, 334, 437, 469, 547, 556, 913, 1341, 1680
BstNI CCWGG 1 cut(s) 467
BstNSI RCATGY 2 cut(s) 248, 621
BstPAI GACNNNNGTC 1 cut(s) 134
BstSCI CCNGG 2 cut(s) 465, 1636
BstSFI CTRYAG 1 cut(s) 678
BstSLI GKGCMC 4 cut(s) 236, 302, 1158, 1676
BstUI CGCG 2 cut(s) 16, 480
BstV1I GCAGC 4 cut(s) 443, 484, 537, 1607
BstX2I RGATCY 2 cut(s) 108, 487
BstXI CCANNNNNNTGG 1 cut(s) 1730
BstYI RGATCY 2 cut(s) 108, 487
Bsu36I CCTNAGG 1 cut(s) 716
BsuRI GGCC 5 cut(s) 9, 599, 1061, 1457, 1583
BtgI CCRYGG 2 cut(s) 902, 1330
BtsCI GGATG 4 cut(s) 189, 711, 903, 1457
BtsIMutI CAGTG 5 cut(s) 375, 419, 990, 1363, 1512
BtuMI TCGCGA 1 cut(s) 480
Cac8I GCNNGC 8 cut(s) 16, 201, 290, 302, 335, 563, 619, 937
CfoI GCGC 4 cut(s) 16, 18, 472, 561
Cfr13I GGNCC 5 cut(s) 926, 1353, 1455, 1543, 1733
Csp6I GTAC 2 cut(s) 919, 1180
CspCI CAANNNNNGTGG 2 cut(s) 969, 1004
CviQI GTAC 2 cut(s) 919, 1180
DdeI CTNAG 8 cut(s) 40, 57, 112, 716, 866, 1340, 1463, 1504
DpnI GATC 9 cut(s) 110, 489, 593, 614, 690, 707, 791, 1166, 1257
DpnII GATC 9 cut(s) 108, 487, 591, 612, 688, 705, 789, 1164, 1255
Eam1104I CTCTTC 1 cut(s) 176
EarI CTCTTC 1 cut(s) 176
Eco130I CCWWGG 2 cut(s) 30, 1330
Eco147I AGGCCT 3 cut(s) 9, 1061, 1583
Eco32I GATATC 1 cut(s) 883
Eco47I GGWCC 4 cut(s) 926, 1353, 1543, 1733
Eco57I CTGAAG 1 cut(s) 908
Eco81I CCTNAGG 1 cut(s) 716
EcoNI CCTNNNNNAGG 1 cut(s) 933
EcoRI GAATTC 2 cut(s) 455, 1140
EcoRII CCWGG 1 cut(s) 465
EcoRV GATATC 1 cut(s) 883
EcoT14I CCWWGG 2 cut(s) 30, 1330
EcoT22I ATGCAT 1 cut(s) 623
ErhI CCWWGG 2 cut(s) 30, 1330
Esp3I CGTCTC 1 cut(s) 763
FalI AAGNNNNNCTT 4 cut(s) 95, 127, 1169, 1201
FaqI GGGAC 2 cut(s) 509, 650
FbaI TGATCA 1 cut(s) 591
FblI GTMKAC 3 cut(s) 1398, 1475, 1612
Fnu4HI GCNGC 5 cut(s) 432, 473, 551, 1345, 1621
FokI GGATG 4 cut(s) 176, 698, 910, 1464
Fsp4HI GCNGC 5 cut(s) 432, 473, 551, 1345, 1621
FspBI CTAG 8 cut(s) 5, 11, 342, 428, 752, 1286, 1520, 1608
GlaI GCGC 4 cut(s) 15, 17, 471, 560
GluI GCNGC 5 cut(s) 432, 473, 551, 1345, 1621
HaeIII GGCC 5 cut(s) 9, 599, 1061, 1457, 1583
HapII CCGG 2 cut(s) 698, 1637
HhaI GCGC 4 cut(s) 16, 18, 472, 561
Hin1I GRCGYC 1 cut(s) 756
Hin6I GCGC 4 cut(s) 14, 16, 470, 559
HinP1I GCGC 4 cut(s) 14, 16, 470, 559
HincII GTYRAC 3 cut(s) 1399, 1476, 1613
HindII GTYRAC 3 cut(s) 1399, 1476, 1613
HindIII AAGCTT 1 cut(s) 1424
HpaII CCGG 2 cut(s) 698, 1637
HphI GGTGA 5 cut(s) 464, 1003, 1136, 1274, 1369
Hpy166II GTNNAC 7 cut(s) 49, 250, 300, 801, 1399, 1476, 1613
Hpy188I TCNGA 8 cut(s) 60, 100, 394, 487, 547, 591, 763, 783
Hpy8I GTNNAC 7 cut(s) 49, 250, 300, 801, 1399, 1476, 1613
Hpy99I CGWCG 1 cut(s) 767
HpyAV CCTTC 4 cut(s) 1072, 1130, 1507, 1534
HpyCH4III ACNGT 6 cut(s) 370, 913, 985, 1095, 1480, 1688
HpyCH4IV ACGT 1 cut(s) 756
HpyF10VI GCNNNNNNNGC 9 cut(s) 15, 334, 437, 469, 547, 556, 913, 1341, 1680
HpyF3I CTNAG 8 cut(s) 40, 57, 112, 716, 866, 1340, 1463, 1504
HpySE526I ACGT 1 cut(s) 756
Hsp92I GRCGYC 1 cut(s) 756
HspAI GCGC 4 cut(s) 14, 16, 470, 559
Ksp22I TGATCA 1 cut(s) 591
Kzo9I GATC 9 cut(s) 108, 487, 591, 612, 688, 705, 789, 1164, 1255
LmnI GCTCC 3 cut(s) 468, 847, 1130
Lsp1109I GCAGC 4 cut(s) 443, 484, 537, 1607
LweI GCATC 5 cut(s) 315, 425, 630, 888, 948
MaeI CTAG 8 cut(s) 5, 11, 342, 428, 752, 1286, 1520, 1608
MaeII ACGT 1 cut(s) 756
MaeIII GTNAC 5 cut(s) 22, 344, 1095, 1486, 1709
MalI GATC 9 cut(s) 110, 489, 593, 614, 690, 707, 791, 1166, 1257
MboI GATC 9 cut(s) 108, 487, 591, 612, 688, 705, 789, 1164, 1255
MfeI CAATTG 3 cut(s) 504, 840, 1239
MflI RGATCY 2 cut(s) 108, 487
MhlI GDGCHC 4 cut(s) 236, 302, 1158, 1676
MluCI AATT 8 cut(s) 455, 504, 570, 840, 964, 1140, 1223, 1239
MlyI GAGTC 3 cut(s) 124, 531, 1394
MmeI TCCRAC 2 cut(s) 786, 1282
Mph1103I ATGCAT 1 cut(s) 623
MroXI GAANNNNTTC 2 cut(s) 1140, 1215
MseI TTAA 3 cut(s) 582, 702, 1750
MslI CAYNNNNRTG 6 cut(s) 138, 144, 239, 368, 1104, 1728
MspI CCGG 2 cut(s) 698, 1637
MspR9I CCNGG 2 cut(s) 467, 1638
MunI CAATTG 3 cut(s) 504, 840, 1239
MvaI CCWGG 1 cut(s) 467
MvnI CGCG 2 cut(s) 16, 480
MwoI GCNNNNNNNGC 9 cut(s) 15, 334, 437, 469, 547, 556, 913, 1341, 1680
NciI CCSGG 1 cut(s) 1638
NcoI CCATGG 1 cut(s) 1330
NdeII GATC 9 cut(s) 108, 487, 591, 612, 688, 705, 789, 1164, 1255
NlaIV GGNNCC 3 cut(s) 464, 1126, 1656
NmuCI GTSAC 3 cut(s) 344, 1095, 1486
NruI TCGCGA 1 cut(s) 480
NsiI ATGCAT 1 cut(s) 623
NspI RCATGY 2 cut(s) 248, 621
OliI CACNNNNGTG 2 cut(s) 239, 368
PaeI GCATGC 1 cut(s) 621
PauI GCGCGC 1 cut(s) 14
PceI AGGCCT 3 cut(s) 9, 1061, 1583
PcsI WCGNNNNNNNCGW 3 cut(s) 621, 762, 1048
PdmI GAANNNNTTC 2 cut(s) 1140, 1215
PfeI GAWTC 9 cut(s) 149, 164, 312, 482, 778, 835, 1039, 1216, 1279
PflFI GACNNNGTC 2 cut(s) 1403, 1547
PkrI GCNGC 5 cut(s) 433, 474, 552, 1346, 1622
PleI GAGTC 3 cut(s) 124, 530, 1394
PpsI GAGTC 3 cut(s) 124, 530, 1394
PshAI GACNNNNGTC 1 cut(s) 134
Psp6I CCWGG 1 cut(s) 465
PspGI CCWGG 1 cut(s) 465
PspN4I GGNNCC 3 cut(s) 464, 1126, 1656
PspPI GGNCC 5 cut(s) 926, 1353, 1455, 1543, 1733
PsuI RGATCY 2 cut(s) 108, 487
PsyI GACNNNGTC 2 cut(s) 1403, 1547
PteI GCGCGC 1 cut(s) 14
RruI TCGCGA 1 cut(s) 480
RsaI GTAC 2 cut(s) 920, 1181
RsaNI GTAC 2 cut(s) 919, 1180
RseI CAYNNNNRTG 6 cut(s) 138, 144, 239, 368, 1104, 1728
SalI GTCGAC 3 cut(s) 1397, 1474, 1611
SaqAI TTAA 3 cut(s) 582, 702, 1750
SatI GCNGC 5 cut(s) 432, 473, 551, 1345, 1621
Sau3AI GATC 9 cut(s) 108, 487, 591, 612, 688, 705, 789, 1164, 1255
Sau96I GGNCC 5 cut(s) 926, 1353, 1455, 1543, 1733
ScaI AGTACT 1 cut(s) 920
SchI GAGTC 3 cut(s) 124, 531, 1394
ScrFI CCNGG 2 cut(s) 467, 1638
SduI GDGCHC 4 cut(s) 236, 302, 1158, 1676
SfaNI GCATC 5 cut(s) 315, 425, 630, 888, 948
SfcI CTRYAG 1 cut(s) 678
SinI GGWCC 4 cut(s) 926, 1353, 1543, 1733
SmiMI CAYNNNNRTG 6 cut(s) 138, 144, 239, 368, 1104, 1728
SmlI CTYRAG 4 cut(s) 194, 237, 536, 575
SmoI CTYRAG 4 cut(s) 194, 237, 536, 575
SphI GCATGC 1 cut(s) 621
Sse9I AATT 8 cut(s) 455, 504, 570, 840, 964, 1140, 1223, 1239
SseBI AGGCCT 3 cut(s) 9, 1061, 1583
SsiI CCGC 2 cut(s) 1335, 1345
SspMI CTAG 8 cut(s) 5, 11, 342, 428, 752, 1286, 1520, 1608
StuI AGGCCT 3 cut(s) 9, 1061, 1583
StyD4I CCNGG 2 cut(s) 465, 1636
StyI CCWWGG 2 cut(s) 30, 1330
TaaI ACNGT 6 cut(s) 370, 913, 985, 1095, 1480, 1688
TaiI ACGT 1 cut(s) 759
TaqI TCGA 7 cut(s) 624, 708, 776, 1014, 1398, 1475, 1612
TaqII GACCGA 1 cut(s) 1393
TasI AATT 8 cut(s) 455, 504, 570, 840, 964, 1140, 1223, 1239
TatI WGTACW 2 cut(s) 918, 1179
TauI GCSGC 1 cut(s) 1347
TfiI GAWTC 9 cut(s) 149, 164, 312, 482, 778, 835, 1039, 1216, 1279
Tru1I TTAA 3 cut(s) 582, 702, 1750
Tru9I TTAA 3 cut(s) 582, 702, 1750
TscAI CASTG 5 cut(s) 375, 426, 990, 1363, 1512
TseFI GTSAC 3 cut(s) 344, 1095, 1486
TseI GCWGC 4 cut(s) 431, 472, 550, 1620
Tsp45I GTSAC 3 cut(s) 344, 1095, 1486
TspDTI ATGAA 6 cut(s) 162, 390, 730, 937, 1010, 1682
TspGWI ACGGA 2 cut(s) 1117, 1662
TspRI CASTG 5 cut(s) 375, 426, 990, 1363, 1512
Tth111I GACNNNGTC 2 cut(s) 1403, 1547
VneI GTGCAC 1 cut(s) 298
VpaK11BI GGWCC 4 cut(s) 926, 1353, 1543, 1733
XagI CCTNNNNNAGG 1 cut(s) 933
XapI RAATTY 3 cut(s) 455, 964, 1140
XceI RCATGY 2 cut(s) 248, 621
XmiI GTMKAC 3 cut(s) 1398, 1475, 1612
XmnI GAANNNNTTC 2 cut(s) 1140, 1215
XspI CTAG 8 cut(s) 5, 11, 342, 428, 752, 1286, 1520, 1608
ZraI GACGTC 1 cut(s) 757
ZrmI AGTACT 1 cut(s) 920
Zsp2I ATGCAT 1 cut(s) 623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.