RLG00000008288

Sieve element occlusion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000511
Physical Location & Seq
Reverse (-)
28336807 .. 28339565
2759 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008288

Sequence Viewer

Length: 1470 bp
ATGCAATGCAAGCCTCCTGGTGACAAAATCGCCCACAACACAACAGTGGCAATACTTAACAAGCTCTCAAAGTATTCATGGGAAGCAAAGGCATCACTGACCCTAGCTGCTTTTGCTGTGGAATATGGTGAATTCTGGCTCCTTGCGCAACTTCGGGAATCAAACCACCTTGCCAAATCAATTGCAATCCTCAAACGAGTCCCTGTTCTCCTCAAGCCATCGGAGCTGCAAAAGCGCAGGCAATCAATTCTTGAGCTTAACAATCTGATCAAGGCCACACTACAAGTGATCGAATGCATCAACCAGTTCAATAAGTATTCCCATTATCTCCCAAAAGAATTCCCCGGTTTGTCGATAGCATCGGAACATATTCCGGTTGATGTCTATTGGGCTATCATCACTATTGCTGCTTGTGCCACTAAGATCACTATACTCACTTGTGATGAGAGGAAGAATGTGCTATTGTTCATTTCCAGCCTAGACATTACGGATGACGACATCTCGATTCTAAAACCGATCCACGAGTTCACAATGAAAGACAATCAGTATGAGATTGTCTGGATACCAATCATGGAGCAATGGACTGATGACCTGAGAAAGAAGTTCGATATCCTGAAGAACAAGATGCCGTGGTTTACGGTGCAGTACCCTGGACCTATAGCAGGCATCAATTATATCAAGAAGGACTGGAACTTCAAGGGTAAGCCTACGATGGTGGTGATGAACCCACAAGGAAAGGTCGAACACCTTAACGCTGTCCACATGGTTCGGGTATGGGGAGTAAAGGCCTTCCCTTTCACACAGACAAGAGAAGCAGAACTGTCACATTCTGATGGAGAAAAATGGGTTTCCTCCGTTGTTAACGGAATTCACCCATCTCTGCCCACTTGGATCAAAGAAAATAAGTACATCTTCTTCTATGGCGGTAAAGACAACGTATGGATTCAGAATTTTAAAAATAAAGCAACTGCCCTTGCAAAAGATCCAATCTTCAAGGAAGCAAAGATAGAGTTGGTTTGCGTTGGAAAAGACAGCAAAGGAGAAGATGACCATGGCGTTCTAGGCCGCTTCTGGACCGGTGGAGAAAGCCTGTTCTTCATCACAGGCCAATGGCAGGTCGACTCGGTCAGTGAAGAAATCCAGAAGCTTCTCTCTTACAAAAACGAAAGTGGATGGGCAGTGCTTTGCAAAGGGTCGACTGTGTTGGTCACGGCTCATGGTGTCTCGGTGTTGAAGGTGGTAGAGGACTTTGAGAAATGGAAGGACCCTGTGAACGGGTTTGAGTTTTGTTTCACAACCTACAATGGGACGATTATTCAAGGTAGCCGTCAACCTTGCTGCCGTGTGGACATTCCGGGGTCTAACGGAAAGGTTCCAGATTCAATGAAGCGCCCTGATTGCCACCGTAGTATGGAGACTATTATCAGTTACAAGTGCTGCCACACTGATGGTCCTATTGCACATCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SEO_C SEO_N

Protein Analysis

490

Amino Acids

55.57

Weight (kDa)

8.43

Isoelectric Point (pI)

30.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SEO_N PF14576 1 - 146 5e-52 Sieve element occlusion N-terminus
SEO_C PF14577 284 - 349 4.5e-12 Sieve element occlusion C-terminus
SEO_C PF14577 357 - 481 3.7e-25 Sieve element occlusion C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000511)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02370 FvH4_4g02370 FvH4_4g02370 FvH4_4g02430 FvH4_4g02430 FvH4_4g02460 FvH4_4g02460 FvH4_4g02460 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_6g05920
malus_domestica MD00G1111000.v1.1 MD08G1225800.v1.1 MD13G1205700.v1.1 MD13G1205800.v1.1 MD13G1205900.v1.1 MD13G1206000.v1.1 MD16G1207500.v1.1 MD16G1207600.v1.1
prunus_persica Prupe.1G028400_v2.0.a1 Prupe.1G028500_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028900_v2.0.a1 Prupe.1G029000_v2.0.a1 Prupe.1G029100_v2.0.a1
pyrus_communis pycom08g19680 pycom08g19730 pycom16g17460 pycom16g17500
rosa_chinensis RchiOBHm_Chr4g0389751 RchiOBHm_Chr4g0389771 RchiOBHm_Chr4g0389791 RchiOBHm_Chr4g0389861 RchiOBHm_Chr4g0389881 RchiOBHm_Chr4g0389901 RchiOBHm_Chr4g0412411
rosa_laevigata RLG00000008288 RLG00000009901 RLG00000009945 RLG00000009954 RLG00000009956 RLG00000009957 RLG00000009958 RLG00000019246
rosa_multiflora Rmu_co8275125.1_g000001 Rmu_sc0002083.1_g000003 Rmu_sc0002083.1_g000025 Rmu_sc0002604.1_g000016 Rmu_sc0004336.1_g000031 Rmu_sc0010423.1_g000003
rosa_roxburghii Rroxscaffold_5G00335790 Rroxscaffold_5G00335850 Rroxscaffold_5G00335970 Rroxscaffold_5G00335990
rosa_rugosa Rorug03G0325100 Rorug03G0325300 Rorug03G0325500.1 Rorug03G0326800 Rorug03G0327000 Rorug04G0104400
rosa_samantha Rh4AG029900 Rh4AG030000 Rh4AG030100 Rh4AG030200 Rh4AG030600 Rh4AG172900 Rh4BG023200 Rh4BG023900 Rh4BG024000 Rh4BG024100 Rh4BG172200 Rh4DG023300 Rh4DG023800 Rh4DG023900 Rh4DG024000 Rh4DG151600
rosa_wichuraiana Rw1G002330 Rw1G002340 Rw4G002260 Rw4G002270 Rw4G002280 Rw4G002300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 147
Acc36I ACCTGC 1 cut(s) 1105
AccI GTMKAC 2 cut(s) 1119, 1196
AciI CCGC 2 cut(s) 924, 1066
AclWI GGATC 3 cut(s) 511, 899, 977
AcsI RAATTY 4 cut(s) 131, 338, 867, 949
AcuI CTGAAG 1 cut(s) 635
AfaI GTAC 2 cut(s) 647, 908
AfiI CCNNNNNNNGG 5 cut(s) 662, 1114, 1274, 1305, 1411
AgeI ACCGGT 1 cut(s) 1076
AgsI TTSAA 6 cut(s) 310, 697, 994, 1234, 1319, 1383
AjnI CCWGG 2 cut(s) 16, 649
AleI CACNNNNGTG 1 cut(s) 44
AluBI AGCT 5 cut(s) 64, 107, 226, 256, 1147
AluI AGCT 5 cut(s) 64, 107, 226, 256, 1147
Alw26I GTCTC 2 cut(s) 1228, 1409
AlwI GGATC 3 cut(s) 511, 899, 977
AoxI GGCC 4 cut(s) 273, 786, 1063, 1105
ApeKI GCWGC 5 cut(s) 107, 226, 407, 1338, 1437
ApoI RAATTY 4 cut(s) 131, 338, 867, 949
AsiGI ACCGGT 1 cut(s) 1076
Asp700I GAANNNNTTC 1 cut(s) 369
AspLEI GCGC 3 cut(s) 148, 237, 1392
AspS9I GGNCC 4 cut(s) 653, 1074, 1264, 1451
AsuC2I CCSGG 2 cut(s) 345, 1356
AsuHPI GGTGA 4 cut(s) 32, 140, 730, 863
AvaII GGWCC 4 cut(s) 653, 1074, 1264, 1451
BarI GAAGNNNNNNTAC 2 cut(s) 899, 931
BauI CACGAG 1 cut(s) 521
BbvI GCAGC 5 cut(s) 94, 213, 394, 1325, 1424
BccI CCATC 6 cut(s) 226, 706, 827, 883, 1167, 1442
BceAI ACGGC 4 cut(s) 613, 1227, 1311, 1326
BciT130I CCWGG 2 cut(s) 18, 651
BciVI GTATCC 1 cut(s) 555
BclI TGATCA 1 cut(s) 267
BcnI CCSGG 2 cut(s) 345, 1356
BcoDI GTCTC 2 cut(s) 1228, 1409
BfaI CTAG 3 cut(s) 104, 479, 1061
BfmI CTRYAG 1 cut(s) 657
BfoI RGCGCY 1 cut(s) 1393
BfuAI ACCTGC 1 cut(s) 1105
BfuI GTATCC 1 cut(s) 555
BisI GCNGC 6 cut(s) 108, 227, 408, 1066, 1339, 1438
BlsI GCNGC 6 cut(s) 109, 228, 409, 1067, 1340, 1439
Bme1390I CCNGG 4 cut(s) 18, 345, 651, 1356
Bme18I GGWCC 4 cut(s) 653, 1074, 1264, 1451
BmgT120I GGNCC 4 cut(s) 653, 1074, 1264, 1451
BmiI GGNNCC 3 cut(s) 140, 1266, 1374
BmrFI CCNGG 4 cut(s) 18, 345, 651, 1356
BmsI GCATC 5 cut(s) 101, 306, 368, 615, 675
BpuEI CTTGAG 2 cut(s) 197, 272
BpuMI CCSGG 2 cut(s) 345, 1356
BsaBI GATNNNNATC 1 cut(s) 566
BsaJI CCNNGG 5 cut(s) 343, 629, 649, 1051, 1355
BsaWI WCCGGW 2 cut(s) 373, 1076
Bsc4I CCNNNNNNNGG 5 cut(s) 662, 1114, 1274, 1305, 1411
Bse118I RCCGGY 1 cut(s) 1076
Bse1I ACTGG 2 cut(s) 304, 692
Bse3DI GCAATG 2 cut(s) 11, 584
Bse8I GATNNNNATC 1 cut(s) 566
BseBI CCWGG 2 cut(s) 18, 651
BseDI CCNNGG 5 cut(s) 343, 629, 649, 1051, 1355
BseGI GGATG 2 cut(s) 496, 1178
BseJI GATNNNNATC 1 cut(s) 566
BseLI CCNNNNNNNGG 5 cut(s) 662, 1114, 1274, 1305, 1411
BseMI GCAATG 2 cut(s) 11, 584
BseMII CTCAG 1 cut(s) 584
BseNI ACTGG 2 cut(s) 304, 692
BseRI GAGGAG 1 cut(s) 200
BseXI GCAGC 5 cut(s) 94, 213, 394, 1325, 1424
BsgI GTGCAG 1 cut(s) 662
BshFI GGCC 4 cut(s) 275, 788, 1065, 1107
BshTI ACCGGT 1 cut(s) 1076
BsiSI CCGG 4 cut(s) 345, 374, 1077, 1355
BslFI GGGAC 2 cut(s) 185, 1321
BslI CCNNNNNNNGG 5 cut(s) 662, 1114, 1274, 1305, 1411
BsmAI GTCTC 2 cut(s) 1228, 1409
BsmFI GGGAC 2 cut(s) 185, 1321
BsmI GAATGC 1 cut(s) 299
BsnI GGCC 4 cut(s) 275, 788, 1065, 1107
Bsp143I GATC 6 cut(s) 267, 288, 423, 516, 891, 982
Bsp19I CCATGG 1 cut(s) 1051
BspACI CCGC 2 cut(s) 924, 1066
BspANI GGCC 4 cut(s) 275, 788, 1065, 1107
BspCNI CTCAG 1 cut(s) 585
BspLI GGNNCC 3 cut(s) 140, 1266, 1374
BspMI ACCTGC 1 cut(s) 1105
BspPI GGATC 3 cut(s) 511, 899, 977
BsrDI GCAATG 2 cut(s) 11, 584
BsrFI RCCGGY 1 cut(s) 1076
BsrI ACTGG 2 cut(s) 304, 692
BssAI RCCGGY 1 cut(s) 1076
BssECI CCNNGG 5 cut(s) 343, 629, 649, 1051, 1355
BssMI GATC 6 cut(s) 267, 288, 423, 516, 891, 982
BssSI CACGAG 1 cut(s) 521
BssT1I CCWWGG 1 cut(s) 1051
Bst2BI CACGAG 1 cut(s) 521
Bst2UI CCWGG 2 cut(s) 18, 651
Bst4CI ACNGT 5 cut(s) 46, 640, 822, 1201, 1406
BstC8I GCNNGC 3 cut(s) 11, 239, 664
BstDEI CTNAG 2 cut(s) 420, 593
BstDSI CCRYGG 2 cut(s) 629, 1051
BstENI CCTNNNNNAGG 1 cut(s) 660
BstF5I GGATG 2 cut(s) 496, 1178
BstH2I RGCGCY 1 cut(s) 1393
BstHHI GCGC 3 cut(s) 148, 237, 1392
BstKTI GATC 6 cut(s) 270, 291, 426, 519, 894, 985
BstMAI GTCTC 2 cut(s) 1228, 1409
BstMBI GATC 6 cut(s) 267, 288, 423, 516, 891, 982
BstMWI GCNNNNNNNGC 8 cut(s) 10, 113, 145, 223, 232, 413, 1062, 1398
BstNI CCWGG 2 cut(s) 18, 651
BstSCI CCNGG 4 cut(s) 16, 343, 649, 1354
BstSFI CTRYAG 1 cut(s) 657
BstV1I GCAGC 5 cut(s) 94, 213, 394, 1325, 1424
BstX2I RGATCY 1 cut(s) 982
BstXI CCANNNNNNTGG 1 cut(s) 1448
BstYI RGATCY 1 cut(s) 982
BsuI GTATCC 1 cut(s) 555
BsuRI GGCC 4 cut(s) 275, 788, 1065, 1107
BtgI CCRYGG 2 cut(s) 629, 1051
BtsCI GGATG 2 cut(s) 496, 1178
BtsI GCAGTG 1 cut(s) 1185
BtsIMutI CAGTG 5 cut(s) 51, 95, 1135, 1185, 1443
BveI ACCTGC 1 cut(s) 1105
Cac8I GCNNGC 3 cut(s) 11, 239, 664
CfoI GCGC 3 cut(s) 148, 237, 1392
Cfr10I RCCGGY 1 cut(s) 1076
Cfr13I GGNCC 4 cut(s) 653, 1074, 1264, 1451
Csp6I GTAC 2 cut(s) 646, 907
CspAI ACCGGT 1 cut(s) 1076
CviAII CATG 5 cut(s) 78, 571, 763, 1052, 1217
CviQI GTAC 2 cut(s) 646, 907
DdeI CTNAG 2 cut(s) 420, 593
DpnI GATC 6 cut(s) 269, 290, 425, 518, 893, 984
DpnII GATC 6 cut(s) 267, 288, 423, 516, 891, 982
DraI TTTAAA 1 cut(s) 955
Eco130I CCWWGG 1 cut(s) 1051
Eco147I AGGCCT 1 cut(s) 788
Eco32I GATATC 1 cut(s) 610
Eco47I GGWCC 4 cut(s) 653, 1074, 1264, 1451
Eco57I CTGAAG 1 cut(s) 635
EcoNI CCTNNNNNAGG 1 cut(s) 660
EcoO109I RGGNCCY 1 cut(s) 1264
EcoRI GAATTC 3 cut(s) 131, 338, 867
EcoRII CCWGG 2 cut(s) 16, 649
EcoRV GATATC 1 cut(s) 610
EcoT14I CCWWGG 1 cut(s) 1051
EcoT22I ATGCAT 1 cut(s) 299
ErhI CCWWGG 1 cut(s) 1051
FaeI CATG 5 cut(s) 81, 574, 766, 1055, 1220
FalI AAGNNNNNCTT 2 cut(s) 896, 928
FaqI GGGAC 2 cut(s) 185, 1321
FatI CATG 5 cut(s) 77, 570, 762, 1051, 1216
FbaI TGATCA 1 cut(s) 267
FblI GTMKAC 2 cut(s) 1119, 1196
Fnu4HI GCNGC 6 cut(s) 108, 227, 408, 1066, 1339, 1438
FokI GGATG 2 cut(s) 503, 1185
Fsp4HI GCNGC 6 cut(s) 108, 227, 408, 1066, 1339, 1438
FspBI CTAG 3 cut(s) 104, 479, 1061
FspI TGCGCA 1 cut(s) 147
GlaI GCGC 3 cut(s) 147, 236, 1391
GluI GCNGC 6 cut(s) 108, 227, 408, 1066, 1339, 1438
HaeII RGCGCY 1 cut(s) 1393
HaeIII GGCC 4 cut(s) 275, 788, 1065, 1107
HapII CCGG 4 cut(s) 345, 374, 1077, 1355
HhaI GCGC 3 cut(s) 148, 237, 1392
Hin1II CATG 5 cut(s) 81, 574, 766, 1055, 1220
Hin6I GCGC 3 cut(s) 146, 235, 1390
HinP1I GCGC 3 cut(s) 146, 235, 1390
HincII GTYRAC 4 cut(s) 862, 1120, 1197, 1331
HindII GTYRAC 4 cut(s) 862, 1120, 1197, 1331
HindIII AAGCTT 1 cut(s) 1145
HinfI GANTC 6 cut(s) 158, 198, 505, 943, 1121, 1379
HpaI GTTAAC 1 cut(s) 862
HpaII CCGG 4 cut(s) 345, 374, 1077, 1355
HphI GGTGA 4 cut(s) 32, 140, 730, 863
Hpy166II GTNNAC 9 cut(s) 528, 636, 760, 862, 1120, 1197, 1273, 1331, 1348
Hpy188I TCNGA 5 cut(s) 223, 267, 364, 832, 948
Hpy188III TCNNGA 9 cut(s) 155, 251, 502, 559, 613, 679, 1072, 1141, 1376
Hpy8I GTNNAC 9 cut(s) 528, 636, 760, 862, 1120, 1197, 1273, 1331, 1348
HpyAV CCTTC 4 cut(s) 676, 799, 1228, 1255
HpyCH4III ACNGT 5 cut(s) 46, 640, 822, 1201, 1406
HpyCH4IV ACGT 1 cut(s) 936
HpyCH4V TGCA 9 cut(s) 4, 9, 185, 229, 297, 643, 977, 1188, 1460
HpyF10VI GCNNNNNNNGC 8 cut(s) 10, 113, 145, 223, 232, 413, 1062, 1398
HpyF3I CTNAG 2 cut(s) 420, 593
HpySE526I ACGT 1 cut(s) 936
Hsp92II CATG 5 cut(s) 81, 574, 766, 1055, 1220
HspAI GCGC 3 cut(s) 146, 235, 1390
Ksp22I TGATCA 1 cut(s) 267
KspAI GTTAAC 1 cut(s) 862
Kzo9I GATC 6 cut(s) 267, 288, 423, 516, 891, 982
LmnI GCTCC 3 cut(s) 144, 223, 574
Lsp1109I GCAGC 5 cut(s) 94, 213, 394, 1325, 1424
LweI GCATC 5 cut(s) 101, 306, 368, 615, 675
MaeI CTAG 3 cut(s) 104, 479, 1061
MaeII ACGT 1 cut(s) 936
MaeIII GTNAC 4 cut(s) 20, 822, 1207, 1427
MalI GATC 6 cut(s) 269, 290, 425, 518, 893, 984
MboI GATC 6 cut(s) 267, 288, 423, 516, 891, 982
MboII GAAGA 8 cut(s) 463, 628, 904, 907, 982, 1055, 1087, 1145
MfeI CAATTG 1 cut(s) 180
MflI RGATCY 1 cut(s) 982
MluCI AATT 7 cut(s) 131, 180, 246, 338, 670, 867, 949
MlyI GAGTC 2 cut(s) 207, 1115
MmeI TCCRAC 1 cut(s) 1003
MnlI CCTC 6 cut(s) 24, 200, 221, 441, 862, 1237
Mph1103I ATGCAT 1 cut(s) 299
MroXI GAANNNNTTC 1 cut(s) 369
MseI TTAA 6 cut(s) 57, 258, 750, 861, 954, 1468
MslI CAYNNNNRTG 3 cut(s) 44, 831, 1446
MspI CCGG 4 cut(s) 345, 374, 1077, 1355
MspR9I CCNGG 4 cut(s) 18, 345, 651, 1356
MunI CAATTG 1 cut(s) 180
Mva1269I GAATGC 1 cut(s) 299
MvaI CCWGG 2 cut(s) 18, 651
MwoI GCNNNNNNNGC 8 cut(s) 10, 113, 145, 223, 232, 413, 1062, 1398
NciI CCSGG 2 cut(s) 345, 1356
NcoI CCATGG 1 cut(s) 1051
NdeII GATC 6 cut(s) 267, 288, 423, 516, 891, 982
NlaIII CATG 5 cut(s) 81, 574, 766, 1055, 1220
NlaIV GGNNCC 3 cut(s) 140, 1266, 1374
NmuCI GTSAC 3 cut(s) 20, 822, 1207
NsbI TGCGCA 1 cut(s) 147
NsiI ATGCAT 1 cut(s) 299
OliI CACNNNNGTG 1 cut(s) 44
PceI AGGCCT 1 cut(s) 788
PctI GAATGC 1 cut(s) 299
PdmI GAANNNNTTC 1 cut(s) 369
PfeI GAWTC 4 cut(s) 158, 505, 943, 1379
PflFI GACNNNGTC 1 cut(s) 1124
PinAI ACCGGT 1 cut(s) 1076
PkrI GCNGC 6 cut(s) 109, 228, 409, 1067, 1340, 1439
PleI GAGTC 2 cut(s) 206, 1115
PpsI GAGTC 2 cut(s) 206, 1115
PpuMI RGGWCCY 1 cut(s) 1264
Psp5II RGGWCCY 1 cut(s) 1264
Psp6I CCWGG 2 cut(s) 16, 649
PspGI CCWGG 2 cut(s) 16, 649
PspN4I GGNNCC 3 cut(s) 140, 1266, 1374
PspPI GGNCC 4 cut(s) 653, 1074, 1264, 1451
PspPPI RGGWCCY 1 cut(s) 1264
PsuI RGATCY 1 cut(s) 982
PsyI GACNNNGTC 1 cut(s) 1124
RsaI GTAC 2 cut(s) 647, 908
RsaNI GTAC 2 cut(s) 646, 907
RseI CAYNNNNRTG 3 cut(s) 44, 831, 1446
SalI GTCGAC 2 cut(s) 1118, 1195
SaqAI TTAA 6 cut(s) 57, 258, 750, 861, 954, 1468
SatI GCNGC 6 cut(s) 108, 227, 408, 1066, 1339, 1438
Sau3AI GATC 6 cut(s) 267, 288, 423, 516, 891, 982
Sau96I GGNCC 4 cut(s) 653, 1074, 1264, 1451
SchI GAGTC 2 cut(s) 207, 1115
ScrFI CCNGG 4 cut(s) 18, 345, 651, 1356
SfaNI GCATC 5 cut(s) 101, 306, 368, 615, 675
SfcI CTRYAG 1 cut(s) 657
SinI GGWCC 4 cut(s) 653, 1074, 1264, 1451
SmiMI CAYNNNNRTG 3 cut(s) 44, 831, 1446
SmlI CTYRAG 2 cut(s) 212, 251
SmoI CTYRAG 2 cut(s) 212, 251
Sse9I AATT 7 cut(s) 131, 180, 246, 338, 670, 867, 949
SseBI AGGCCT 1 cut(s) 788
SsiI CCGC 2 cut(s) 924, 1066
SspMI CTAG 3 cut(s) 104, 479, 1061
StuI AGGCCT 1 cut(s) 788
StyD4I CCNGG 4 cut(s) 16, 343, 649, 1354
StyI CCWWGG 1 cut(s) 1051
TaaI ACNGT 5 cut(s) 46, 640, 822, 1201, 1406
TaiI ACGT 1 cut(s) 939
TaqI TCGA 7 cut(s) 291, 353, 503, 606, 741, 1119, 1196
TaqII GACCGA 1 cut(s) 1114
TasI AATT 7 cut(s) 131, 180, 246, 338, 670, 867, 949
TatI WGTACW 1 cut(s) 906
TauI GCSGC 1 cut(s) 1068
TfiI GAWTC 4 cut(s) 158, 505, 943, 1379
Tru1I TTAA 6 cut(s) 57, 258, 750, 861, 954, 1468
Tru9I TTAA 6 cut(s) 57, 258, 750, 861, 954, 1468
TscAI CASTG 5 cut(s) 51, 102, 1135, 1185, 1450
TseFI GTSAC 3 cut(s) 20, 822, 1207
TseI GCWGC 5 cut(s) 107, 226, 407, 1338, 1437
Tsp45I GTSAC 3 cut(s) 20, 822, 1207
TspDTI ATGAA 6 cut(s) 66, 457, 548, 737, 1087, 1400
TspGWI ACGGA 4 cut(s) 503, 844, 879, 1380
TspRI CASTG 5 cut(s) 51, 102, 1135, 1185, 1450
Tth111I GACNNNGTC 1 cut(s) 1124
VpaK11BI GGWCC 4 cut(s) 653, 1074, 1264, 1451
XagI CCTNNNNNAGG 1 cut(s) 660
XapI RAATTY 4 cut(s) 131, 338, 867, 949
XmiI GTMKAC 2 cut(s) 1119, 1196
XmnI GAANNNNTTC 1 cut(s) 369
XspI CTAG 3 cut(s) 104, 479, 1061
Zsp2I ATGCAT 1 cut(s) 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.