RchiOBHm_Chr4g0412411

Sieve element occlusion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000511
Physical Location & Seq
Forward (+)
36128767 .. 36131766
3000 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38308

Sequence Viewer

Length: 1923 bp
ATGCTAGGCCTAGCATTCAATGTGGCTACCAAGGTAGCCGCAGCAGTCCACCCTACTCACAAAACCATTGATGAGGAGTTTAGCCTGTTTGCCATGTCTGACAAGCAGATCTTGCAGGAGATTTACACGACTCATGTCCATGCTGATGAGACCTTGGATGATGATTCTCTCTTCATCATTGTTGAGAATATCCTCAAGCATGCAACCCAAAATGTTGATGAAATAGTGCAGGGTATCCAAGTGCATGTGGACAACATAGAGGAGAAAAACCCCAAAGCCAGCTTCAGCGTACCATTGTGCACGCTAAAGGGAATCTCCTGCGAGATGCAATGCAAGCCTCCTGGTGACGAAATCGCCCACAACACAACAGTGGCAATACTCAACAAGCTCTCAAAGTATTCATGGGAAGCAAAGGCATCACTGACCCTAGCTGCTTTTGCTATGGAATATGGTGAATTCTGGCTCCTTGCGCAGCTTCGCAAATCAGACCACCTTGCCAAATCAATTGCAATCCTCAAACGAGTCCCTGTTCTCCTCAAGCCAACGGAGCTGCAAAAGCGCAGGCAATCAATTCTTCAGCTTAACAATCTGATCAAGTCCACACTACAAGTGATCGAATGCATCGGCCAGTTCAATAAGTATTCCCGTTATCTCCCAAAAGAATTCCCCGGTTTGTCGATAGCATCGGAACATATTCCGGTTGATGTCTATTGGGCTATCATCACTGTTGTTGCTTGTGCCAAGGAGGAAGAGACTTACATAAGGATCAAGAAATTGTTCCAAACGCCTACTGAAATTATGGAGGTTTTCAAGGGATTAATATTTACAAAGGATAATGTCCAGCCACTCGTCGATGGTTCAACTAAGCAAACGGTTAACATCGACATCCTAAGGAGGAAGAATGTGCTATTGTTCATTTCCAGTCTAGACATTACGGATGACGACATTTCGATTCTAAAACCGATCCACGAGTTCACGAAGAAAGACAATCAGTATAACATTGTCTGGATACCAATTGTGGAGCAATGGACTGATGACCTGAGAAAGAAGTTCGATATCCTGAAGAACAAGATACCGTGGTTTACGGTGCAGTACCCTGGACCTATAGCAGGCATCAAGTACATCAAGAAGGACTGGAACTTCAAGGGTAAGCCTACGATGGTTGTGATGAACCCACATGGAAAGGTCGAACACCCTAACGCTGTCCACATGGTTCGGGTATGGGGAGTAAAGGCCTTCCCTTTCACAGAGACAAGAGAAGCAGAACTGTCACATTCTGATGGAGAACAATGGGTTTCCTCCGTTGTTAACGGAATTCACCCATCTCTGCCCACTTGGATCAAAGAAAATAAGTACATCTTCTTCTATGGCGGTAAAGACAACGTATGGATTCAGAATTTTAAAAATAAAGCAACTGCCCTTGCAAAAGATCCAATCTTCAAGGAAGCAAAGATAGAGTTGGTTTGCGTTGGAAAAGACAGCAAAGGAGAAGATGACCGTGGCGTTCTAGGCCGCTTCTGGACCGGTGTAGAAAGCCTGTTCTTAACCACAGGCCAATGGCAGGTCGACTCGGTCAGTGAAGAAATCCAGAAGCTTCTCTCTTACAAAAACGAAAGTGGATGGGCAGTGCTTTGCAAAGGGTCGACTGTGTTGGTCACGGCTCATGGTGTCTCCGTGTTGAAGGTGGTAGAGGACTTTGAGAAATGGAAGGACCCTGTCAAGGAGAACGGGTTTGAGTTTTGTTTCACAACCTACTATGGGACGATTATTCAAGGTAGCCGTCAACCTTGCTGCCGTGTGGACATTCCGGGGTCTAACGGAAAGGTTCCAGATTCGATGAAGTGCCCTGATTGCCACCGTAGTATGGAGACTATTATCAGTTACAAGTGCTGCCACACTGATGGTCCTATTGCACATCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SEO_C SEO_N

Protein Analysis

640

Amino Acids

72.6

Weight (kDa)

6.86

Isoelectric Point (pI)

33.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SEO_N PF14576 33 - 255 1e-71 Sieve element occlusion N-terminus
SEO_C PF14577 433 - 500 4.7e-12 Sieve element occlusion C-terminus
SEO_C PF14577 506 - 632 2.4e-30 Sieve element occlusion C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000511)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02370 FvH4_4g02370 FvH4_4g02370 FvH4_4g02430 FvH4_4g02430 FvH4_4g02460 FvH4_4g02460 FvH4_4g02460 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_6g05920
malus_domestica MD00G1111000.v1.1 MD08G1225800.v1.1 MD13G1205700.v1.1 MD13G1205800.v1.1 MD13G1205900.v1.1 MD13G1206000.v1.1 MD16G1207500.v1.1 MD16G1207600.v1.1
prunus_persica Prupe.1G028400_v2.0.a1 Prupe.1G028500_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028900_v2.0.a1 Prupe.1G029000_v2.0.a1 Prupe.1G029100_v2.0.a1
pyrus_communis pycom08g19680 pycom08g19730 pycom16g17460 pycom16g17500
rosa_chinensis RchiOBHm_Chr4g0389751 RchiOBHm_Chr4g0389771 RchiOBHm_Chr4g0389791 RchiOBHm_Chr4g0389861 RchiOBHm_Chr4g0389881 RchiOBHm_Chr4g0389901 RchiOBHm_Chr4g0412411
rosa_laevigata RLG00000008288 RLG00000009901 RLG00000009945 RLG00000009954 RLG00000009956 RLG00000009957 RLG00000009958 RLG00000019246
rosa_multiflora Rmu_co8275125.1_g000001 Rmu_sc0002083.1_g000003 Rmu_sc0002083.1_g000025 Rmu_sc0002604.1_g000016 Rmu_sc0004336.1_g000031 Rmu_sc0010423.1_g000003
rosa_roxburghii Rroxscaffold_5G00335790 Rroxscaffold_5G00335850 Rroxscaffold_5G00335970 Rroxscaffold_5G00335990
rosa_rugosa Rorug03G0325100 Rorug03G0325300 Rorug03G0325500.1 Rorug03G0326800 Rorug03G0327000 Rorug04G0104400
rosa_samantha Rh4AG029900 Rh4AG030000 Rh4AG030100 Rh4AG030200 Rh4AG030600 Rh4AG172900 Rh4BG023200 Rh4BG023900 Rh4BG024000 Rh4BG024100 Rh4BG172200 Rh4DG023300 Rh4DG023800 Rh4DG023900 Rh4DG024000 Rh4DG151600
rosa_wichuraiana Rw1G002330 Rw1G002340 Rw4G002260 Rw4G002270 Rw4G002280 Rw4G002300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 471
Acc36I ACCTGC 1 cut(s) 1552
AccI GTMKAC 2 cut(s) 1566, 1643
AciI CCGC 3 cut(s) 39, 1371, 1513
AclWI GGATC 4 cut(s) 773, 958, 1346, 1424
AcoI YGGCCR 1 cut(s) 625
AcsI RAATTY 4 cut(s) 455, 662, 1314, 1396
AcuI CTGAAG 3 cut(s) 268, 560, 1082
AfaI GTAC 4 cut(s) 291, 1094, 1121, 1355
AfiI CCNNNNNNNGG 5 cut(s) 1109, 1561, 1720, 1758, 1864
AgeI ACCGGT 1 cut(s) 1523
AgsI TTSAA 8 cut(s) 19, 634, 811, 861, 1144, 1441, 1681, 1772
AjnI CCWGG 2 cut(s) 340, 1096
AjuI GAANNNNNNNTTGG 2 cut(s) 266, 298
AleI CACNNNNGTG 1 cut(s) 368
AluBI AGCT 7 cut(s) 282, 388, 431, 475, 550, 580, 1594
AluI AGCT 7 cut(s) 282, 388, 431, 475, 550, 580, 1594
Alw21I GWGCWC 1 cut(s) 302
Alw26I GTCTC 5 cut(s) 143, 746, 1244, 1675, 1862
Alw44I GTGCAC 1 cut(s) 298
AlwI GGATC 4 cut(s) 773, 958, 1346, 1424
AoxI GGCC 5 cut(s) 7, 625, 1233, 1510, 1552
ApaLI GTGCAC 1 cut(s) 298
ApeKI GCWGC 6 cut(s) 41, 431, 472, 550, 1791, 1890
ApoI RAATTY 4 cut(s) 455, 662, 1314, 1396
AseI ATTAAT 1 cut(s) 818
AsiGI ACCGGT 1 cut(s) 1523
Asp700I GAANNNNTTC 2 cut(s) 693, 776
AspLEI GCGC 2 cut(s) 472, 561
AspS9I GGNCC 4 cut(s) 1100, 1521, 1711, 1904
AsuC2I CCSGG 2 cut(s) 669, 1809
AsuHPI GGTGA 3 cut(s) 356, 464, 1310
AvaII GGWCC 4 cut(s) 1100, 1521, 1711, 1904
AxyI CCTNAGG 1 cut(s) 890
BaeGI GKGCMC 2 cut(s) 302, 1847
BaeI ACNNNNGTAYC 2 cut(s) 1064, 1097
BarI GAAGNNNNNNTAC 2 cut(s) 1346, 1378
BauI CACGAG 1 cut(s) 968
Bbv12I GWGCWC 1 cut(s) 302
BbvI GCAGC 6 cut(s) 53, 418, 484, 537, 1778, 1877
BccI CCATC 6 cut(s) 848, 1153, 1274, 1330, 1614, 1895
BceAI ACGGC 3 cut(s) 1674, 1764, 1779
BciT130I CCWGG 2 cut(s) 342, 1098
BciVI GTATCC 2 cut(s) 245, 1002
BclI TGATCA 1 cut(s) 591
BcnI CCSGG 2 cut(s) 669, 1809
BcoDI GTCTC 5 cut(s) 143, 746, 1244, 1675, 1862
BfaI CTAG 5 cut(s) 5, 11, 428, 926, 1508
BfmI CTRYAG 1 cut(s) 1104
BfuAI ACCTGC 1 cut(s) 1552
BfuI GTATCC 2 cut(s) 245, 1002
BglII AGATCT 1 cut(s) 108
BisI GCNGC 8 cut(s) 39, 42, 432, 473, 551, 1513, 1792, 1891
BlsI GCNGC 8 cut(s) 40, 43, 433, 474, 552, 1514, 1793, 1892
Bme1390I CCNGG 4 cut(s) 342, 669, 1098, 1809
Bme18I GGWCC 4 cut(s) 1100, 1521, 1711, 1904
BmgT120I GGNCC 4 cut(s) 1100, 1521, 1711, 1904
BmiI GGNNCC 3 cut(s) 464, 1713, 1827
BmrFI CCNGG 4 cut(s) 342, 669, 1098, 1809
BmsI GCATC 5 cut(s) 315, 425, 630, 692, 1122
BoxI GACNNNNGTC 1 cut(s) 134
BpuEI CTTGAG 2 cut(s) 179, 521
BpuMI CCSGG 2 cut(s) 669, 1809
BsaI GGTCTC 1 cut(s) 143
BsaJI CCNNGG 8 cut(s) 30, 153, 667, 741, 1076, 1096, 1498, 1808
BsaWI WCCGGW 2 cut(s) 697, 1523
BsaXI ACNNNNNCTCC 2 cut(s) 1715, 1745
Bsc4I CCNNNNNNNGG 5 cut(s) 1109, 1561, 1720, 1758, 1864
Bse118I RCCGGY 1 cut(s) 1523
Bse1I ACTGG 3 cut(s) 628, 921, 1139
Bse21I CCTNAGG 1 cut(s) 890
Bse3DI GCAATG 2 cut(s) 335, 1031
BseBI CCWGG 2 cut(s) 342, 1098
BseDI CCNNGG 8 cut(s) 30, 153, 667, 741, 1076, 1096, 1498, 1808
BseGI GGATG 4 cut(s) 163, 885, 943, 1625
BseLI CCNNNNNNNGG 5 cut(s) 1109, 1561, 1720, 1758, 1864
BseMI GCAATG 2 cut(s) 335, 1031
BseMII CTCAG 1 cut(s) 1031
BseNI ACTGG 3 cut(s) 628, 921, 1139
BseRI GAGGAG 3 cut(s) 89, 275, 524
BseSI GKGCMC 2 cut(s) 302, 1847
BseXI GCAGC 6 cut(s) 53, 418, 484, 537, 1778, 1877
BsgI GTGCAG 2 cut(s) 248, 1109
BshFI GGCC 5 cut(s) 9, 627, 1235, 1512, 1554
BshTI ACCGGT 1 cut(s) 1523
BsiHKAI GWGCWC 1 cut(s) 302
BsiSI CCGG 4 cut(s) 669, 698, 1524, 1808
BslFI GGGAC 2 cut(s) 509, 1774
BslI CCNNNNNNNGG 5 cut(s) 1109, 1561, 1720, 1758, 1864
BsmAI GTCTC 5 cut(s) 143, 746, 1244, 1675, 1862
BsmFI GGGAC 2 cut(s) 509, 1774
BsmI GAATGC 2 cut(s) 14, 623
BsnI GGCC 5 cut(s) 9, 627, 1235, 1512, 1554
Bso31I GGTCTC 1 cut(s) 143
Bsp1286I GDGCHC 2 cut(s) 302, 1847
Bsp143I GATC 7 cut(s) 108, 591, 612, 765, 963, 1338, 1429
BspACI CCGC 3 cut(s) 39, 1371, 1513
BspANI GGCC 5 cut(s) 9, 627, 1235, 1512, 1554
BspCNI CTCAG 1 cut(s) 1032
BspLI GGNNCC 3 cut(s) 464, 1713, 1827
BspMI ACCTGC 1 cut(s) 1552
BspPI GGATC 4 cut(s) 773, 958, 1346, 1424
BspTNI GGTCTC 1 cut(s) 143
BsrDI GCAATG 2 cut(s) 335, 1031
BsrFI RCCGGY 1 cut(s) 1523
BsrI ACTGG 3 cut(s) 628, 921, 1139
BssAI RCCGGY 1 cut(s) 1523
BssECI CCNNGG 8 cut(s) 30, 153, 667, 741, 1076, 1096, 1498, 1808
BssMI GATC 7 cut(s) 108, 591, 612, 765, 963, 1338, 1429
BssSI CACGAG 1 cut(s) 968
BssT1I CCWWGG 3 cut(s) 30, 153, 741
Bst2BI CACGAG 1 cut(s) 968
Bst2UI CCWGG 2 cut(s) 342, 1098
Bst4CI ACNGT 9 cut(s) 370, 727, 874, 1077, 1087, 1269, 1499, 1648, 1859
Bst6I CTCTTC 2 cut(s) 176, 744
BstAPI GCANNNNNTGC 1 cut(s) 112
BstC8I GCNNGC 6 cut(s) 201, 280, 302, 335, 563, 1111
BstDEI CTNAG 3 cut(s) 864, 890, 1040
BstDSI CCRYGG 2 cut(s) 1076, 1498
BstENI CCTNNNNNAGG 1 cut(s) 1107
BstF5I GGATG 4 cut(s) 163, 885, 943, 1625
BstHHI GCGC 2 cut(s) 472, 561
BstKTI GATC 7 cut(s) 111, 594, 615, 768, 966, 1341, 1432
BstMAI GTCTC 5 cut(s) 143, 746, 1244, 1675, 1862
BstMBI GATC 7 cut(s) 108, 591, 612, 765, 963, 1338, 1429
BstMWI GCNNNNNNNGC 8 cut(s) 112, 334, 437, 469, 547, 556, 1509, 1851
BstNI CCWGG 2 cut(s) 342, 1098
BstNSI RCATGY 2 cut(s) 203, 248
BstPAI GACNNNNGTC 1 cut(s) 134
BstSCI CCNGG 4 cut(s) 340, 667, 1096, 1807
BstSFI CTRYAG 1 cut(s) 1104
BstSLI GKGCMC 2 cut(s) 302, 1847
BstV1I GCAGC 6 cut(s) 53, 418, 484, 537, 1778, 1877
BstX2I RGATCY 2 cut(s) 108, 1429
BstXI CCANNNNNNTGG 1 cut(s) 1901
BstYI RGATCY 2 cut(s) 108, 1429
Bsu36I CCTNAGG 1 cut(s) 890
BsuI GTATCC 2 cut(s) 245, 1002
BsuRI GGCC 5 cut(s) 9, 627, 1235, 1512, 1554
BtgI CCRYGG 2 cut(s) 1076, 1498
BtsCI GGATG 4 cut(s) 163, 885, 943, 1625
BtsI GCAGTG 1 cut(s) 1632
BtsIMutI CAGTG 6 cut(s) 375, 419, 723, 1582, 1632, 1896
BveI ACCTGC 1 cut(s) 1552
Cac8I GCNNGC 6 cut(s) 201, 280, 302, 335, 563, 1111
CfoI GCGC 2 cut(s) 472, 561
Cfr10I RCCGGY 1 cut(s) 1523
Cfr13I GGNCC 4 cut(s) 1100, 1521, 1711, 1904
Csp6I GTAC 4 cut(s) 290, 1093, 1120, 1354
CspAI ACCGGT 1 cut(s) 1523
CviAII CATG 9 cut(s) 94, 134, 140, 200, 245, 402, 1178, 1210, 1664
CviQI GTAC 4 cut(s) 290, 1093, 1120, 1354
DdeI CTNAG 3 cut(s) 864, 890, 1040
DpnI GATC 7 cut(s) 110, 593, 614, 767, 965, 1340, 1431
DpnII GATC 7 cut(s) 108, 591, 612, 765, 963, 1338, 1429
DraI TTTAAA 1 cut(s) 1402
EaeI YGGCCR 1 cut(s) 625
Eam1104I CTCTTC 2 cut(s) 176, 744
EarI CTCTTC 2 cut(s) 176, 744
Eco130I CCWWGG 3 cut(s) 30, 153, 741
Eco147I AGGCCT 2 cut(s) 9, 1235
Eco31I GGTCTC 1 cut(s) 143
Eco32I GATATC 1 cut(s) 1057
Eco47I GGWCC 4 cut(s) 1100, 1521, 1711, 1904
Eco57I CTGAAG 3 cut(s) 268, 560, 1082
Eco81I CCTNAGG 1 cut(s) 890
EcoNI CCTNNNNNAGG 1 cut(s) 1107
EcoO109I RGGNCCY 1 cut(s) 1711
EcoRI GAATTC 3 cut(s) 455, 662, 1314
EcoRII CCWGG 2 cut(s) 340, 1096
EcoRV GATATC 1 cut(s) 1057
EcoT14I CCWWGG 3 cut(s) 30, 153, 741
EcoT22I ATGCAT 1 cut(s) 623
ErhI CCWWGG 3 cut(s) 30, 153, 741
FaeI CATG 9 cut(s) 97, 137, 143, 203, 248, 405, 1181, 1213, 1667
FalI AAGNNNNNCTT 4 cut(s) 95, 127, 1343, 1375
FaqI GGGAC 2 cut(s) 509, 1774
FatI CATG 9 cut(s) 93, 133, 139, 199, 244, 401, 1177, 1209, 1663
FbaI TGATCA 1 cut(s) 591
FblI GTMKAC 2 cut(s) 1566, 1643
Fnu4HI GCNGC 8 cut(s) 39, 42, 432, 473, 551, 1513, 1792, 1891
FokI GGATG 4 cut(s) 170, 872, 950, 1632
Fsp4HI GCNGC 8 cut(s) 39, 42, 432, 473, 551, 1513, 1792, 1891
FspBI CTAG 5 cut(s) 5, 11, 428, 926, 1508
FspI TGCGCA 1 cut(s) 471
GlaI GCGC 2 cut(s) 471, 560
GluI GCNGC 8 cut(s) 39, 42, 432, 473, 551, 1513, 1792, 1891
HaeIII GGCC 5 cut(s) 9, 627, 1235, 1512, 1554
HapII CCGG 4 cut(s) 669, 698, 1524, 1808
HhaI GCGC 2 cut(s) 472, 561
Hin1II CATG 9 cut(s) 97, 137, 143, 203, 248, 405, 1181, 1213, 1667
Hin6I GCGC 2 cut(s) 470, 559
HinP1I GCGC 2 cut(s) 470, 559
HincII GTYRAC 5 cut(s) 877, 1309, 1567, 1644, 1784
HindII GTYRAC 5 cut(s) 877, 1309, 1567, 1644, 1784
HindIII AAGCTT 1 cut(s) 1592
HinfI GANTC 8 cut(s) 130, 164, 312, 522, 952, 1390, 1568, 1832
HpaI GTTAAC 2 cut(s) 877, 1309
HpaII CCGG 4 cut(s) 669, 698, 1524, 1808
HphI GGTGA 3 cut(s) 356, 464, 1310
Hpy188I TCNGA 6 cut(s) 100, 487, 591, 688, 1279, 1395
Hpy188III TCNNGA 9 cut(s) 769, 926, 976, 1006, 1060, 1126, 1519, 1588, 1829
Hpy99I CGWCG 1 cut(s) 854
HpyAV CCTTC 4 cut(s) 1123, 1246, 1675, 1702
HpyCH4III ACNGT 9 cut(s) 370, 727, 874, 1077, 1087, 1269, 1499, 1648, 1859
HpyCH4IV ACGT 1 cut(s) 1383
HpyF10VI GCNNNNNNNGC 8 cut(s) 112, 334, 437, 469, 547, 556, 1509, 1851
HpyF3I CTNAG 3 cut(s) 864, 890, 1040
HpySE526I ACGT 1 cut(s) 1383
Hsp92II CATG 9 cut(s) 97, 137, 143, 203, 248, 405, 1181, 1213, 1667
HspAI GCGC 2 cut(s) 470, 559
Ksp22I TGATCA 1 cut(s) 591
KspAI GTTAAC 2 cut(s) 877, 1309
Kzo9I GATC 7 cut(s) 108, 591, 612, 765, 963, 1338, 1429
LmnI GCTCC 3 cut(s) 468, 547, 1021
Lsp1109I GCAGC 6 cut(s) 53, 418, 484, 537, 1778, 1877
LweI GCATC 5 cut(s) 315, 425, 630, 692, 1122
MaeI CTAG 5 cut(s) 5, 11, 428, 926, 1508
MaeII ACGT 1 cut(s) 1383
MaeIII GTNAC 4 cut(s) 344, 1269, 1654, 1880
MalI GATC 7 cut(s) 110, 593, 614, 767, 965, 1340, 1431
MboI GATC 7 cut(s) 108, 591, 612, 765, 963, 1338, 1429
MfeI CAATTG 2 cut(s) 504, 1014
MflI RGATCY 2 cut(s) 108, 1429
MhlI GDGCHC 2 cut(s) 302, 1847
MluCI AATT 9 cut(s) 455, 504, 570, 662, 773, 795, 1014, 1314, 1396
MlyI GAGTC 3 cut(s) 124, 531, 1562
MmeI TCCRAC 1 cut(s) 1450
Mph1103I ATGCAT 1 cut(s) 623
MroXI GAANNNNTTC 2 cut(s) 693, 776
MseI TTAA 7 cut(s) 582, 818, 876, 1308, 1401, 1544, 1921
MslI CAYNNNNRTG 5 cut(s) 138, 144, 368, 1278, 1899
MspI CCGG 4 cut(s) 669, 698, 1524, 1808
MspR9I CCNGG 4 cut(s) 342, 669, 1098, 1809
MunI CAATTG 2 cut(s) 504, 1014
Mva1269I GAATGC 2 cut(s) 14, 623
MvaI CCWGG 2 cut(s) 342, 1098
MwoI GCNNNNNNNGC 8 cut(s) 112, 334, 437, 469, 547, 556, 1509, 1851
NciI CCSGG 2 cut(s) 669, 1809
NdeII GATC 7 cut(s) 108, 591, 612, 765, 963, 1338, 1429
NlaIII CATG 9 cut(s) 97, 137, 143, 203, 248, 405, 1181, 1213, 1667
NlaIV GGNNCC 3 cut(s) 464, 1713, 1827
NmuCI GTSAC 3 cut(s) 344, 1269, 1654
NsbI TGCGCA 1 cut(s) 471
NsiI ATGCAT 1 cut(s) 623
NspI RCATGY 2 cut(s) 203, 248
OliI CACNNNNGTG 1 cut(s) 368
PaeI GCATGC 1 cut(s) 203
PceI AGGCCT 2 cut(s) 9, 1235
PctI GAATGC 2 cut(s) 14, 623
PdmI GAANNNNTTC 2 cut(s) 693, 776
PfeI GAWTC 5 cut(s) 164, 312, 952, 1390, 1832
PflFI GACNNNGTC 2 cut(s) 1571, 1715
PinAI ACCGGT 1 cut(s) 1523
PkrI GCNGC 8 cut(s) 40, 43, 433, 474, 552, 1514, 1793, 1892
PleI GAGTC 3 cut(s) 124, 530, 1562
PpsI GAGTC 3 cut(s) 124, 530, 1562
PpuMI RGGWCCY 1 cut(s) 1711
PshAI GACNNNNGTC 1 cut(s) 134
PshBI ATTAAT 1 cut(s) 818
Psp5II RGGWCCY 1 cut(s) 1711
Psp6I CCWGG 2 cut(s) 340, 1096
PspGI CCWGG 2 cut(s) 340, 1096
PspN4I GGNNCC 3 cut(s) 464, 1713, 1827
PspPI GGNCC 4 cut(s) 1100, 1521, 1711, 1904
PspPPI RGGWCCY 1 cut(s) 1711
PsuI RGATCY 2 cut(s) 108, 1429
PsyI GACNNNGTC 2 cut(s) 1571, 1715
RsaI GTAC 4 cut(s) 291, 1094, 1121, 1355
RsaNI GTAC 4 cut(s) 290, 1093, 1120, 1354
RseI CAYNNNNRTG 5 cut(s) 138, 144, 368, 1278, 1899
SalI GTCGAC 2 cut(s) 1565, 1642
SaqAI TTAA 7 cut(s) 582, 818, 876, 1308, 1401, 1544, 1921
SatI GCNGC 8 cut(s) 39, 42, 432, 473, 551, 1513, 1792, 1891
Sau3AI GATC 7 cut(s) 108, 591, 612, 765, 963, 1338, 1429
Sau96I GGNCC 4 cut(s) 1100, 1521, 1711, 1904
SchI GAGTC 3 cut(s) 124, 531, 1562
ScrFI CCNGG 4 cut(s) 342, 669, 1098, 1809
SduI GDGCHC 2 cut(s) 302, 1847
SfaNI GCATC 5 cut(s) 315, 425, 630, 692, 1122
SfcI CTRYAG 1 cut(s) 1104
SinI GGWCC 4 cut(s) 1100, 1521, 1711, 1904
SmiMI CAYNNNNRTG 5 cut(s) 138, 144, 368, 1278, 1899
SmlI CTYRAG 2 cut(s) 194, 536
SmoI CTYRAG 2 cut(s) 194, 536
SphI GCATGC 1 cut(s) 203
Sse9I AATT 9 cut(s) 455, 504, 570, 662, 773, 795, 1014, 1314, 1396
SseBI AGGCCT 2 cut(s) 9, 1235
SsiI CCGC 3 cut(s) 39, 1371, 1513
SspI AATATT 1 cut(s) 822
SspMI CTAG 5 cut(s) 5, 11, 428, 926, 1508
StuI AGGCCT 2 cut(s) 9, 1235
StyD4I CCNGG 4 cut(s) 340, 667, 1096, 1807
StyI CCWWGG 3 cut(s) 30, 153, 741
TaaI ACNGT 9 cut(s) 370, 727, 874, 1077, 1087, 1269, 1499, 1648, 1859
TaiI ACGT 1 cut(s) 1386
TaqII GACCGA 1 cut(s) 1561
TasI AATT 9 cut(s) 455, 504, 570, 662, 773, 795, 1014, 1314, 1396
TatI WGTACW 2 cut(s) 1119, 1353
TauI GCSGC 2 cut(s) 41, 1515
TfiI GAWTC 5 cut(s) 164, 312, 952, 1390, 1832
Tru1I TTAA 7 cut(s) 582, 818, 876, 1308, 1401, 1544, 1921
Tru9I TTAA 7 cut(s) 582, 818, 876, 1308, 1401, 1544, 1921
TscAI CASTG 6 cut(s) 375, 426, 730, 1582, 1632, 1903
TseFI GTSAC 3 cut(s) 344, 1269, 1654
TseI GCWGC 6 cut(s) 41, 431, 472, 550, 1791, 1890
Tsp45I GTSAC 3 cut(s) 344, 1269, 1654
TspDTI ATGAA 6 cut(s) 163, 234, 390, 904, 1184, 1853
TspGWI ACGGA 6 cut(s) 560, 950, 1291, 1326, 1663, 1833
TspRI CASTG 6 cut(s) 375, 426, 730, 1582, 1632, 1903
Tth111I GACNNNGTC 2 cut(s) 1571, 1715
VneI GTGCAC 1 cut(s) 298
VpaK11BI GGWCC 4 cut(s) 1100, 1521, 1711, 1904
VspI ATTAAT 1 cut(s) 818
XagI CCTNNNNNAGG 1 cut(s) 1107
XapI RAATTY 4 cut(s) 455, 662, 1314, 1396
XbaI TCTAGA 1 cut(s) 925
XceI RCATGY 2 cut(s) 203, 248
XmiI GTMKAC 2 cut(s) 1566, 1643
XmnI GAANNNNTTC 2 cut(s) 693, 776
XspI CTAG 5 cut(s) 5, 11, 428, 926, 1508
Zsp2I ATGCAT 1 cut(s) 623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.