RLG00000009954

Sieve element occlusion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000511
Physical Location & Seq
Reverse (-)
60973739 .. 60976381
2643 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009954

Sequence Viewer

Length: 1515 bp
ATGCAATGCAAGCCTCCTGGAGACGAAATCGCCCACAACACAACAGTGGCAATACTCAACAAGCTGTCAAAGTATTCATGGGAAGCAAAGGCATCACTGACCCTAGCAGCTTTTGCTATGGAATATGGTGAATTCTGGCTCCTGGCGCAGCTTCGCGAATCAGACCACCTTGCCAAATCAATTGCAATCCTCAAACGAGTCCCTGTTCTCCTCCAGCCGTCAGAGCTGCACAAGCGCAGGCAATCAATTCTTGAGCTTAACAACCTGATCAAGGCCATACTGCAAGTGATCGAATGCATCGACCAGTTCAATAAGTATTCCACTTATGACCCAAAAGATGTCCCCGATTTGTCGATAGCCTTGGATCATATTCCGGTTGATGTCTATTGGGTTATCATCACTGTTGTTGCTTGTGCCACTAAGATCACTATACTCACTAGTGATGATATATCAGCTACTATAGTTAAGATCGACATCCTAAGGAGAAAGAATGTGTTATTGTTCATTTCCACCCTAGACGTCTCTGACGATGACATTTCGATTTTGAAACCGATCCACGAGTTCACAAAGAGAGACAATCAGTATAAGATTGTCTGGATTCCAATTGTGGAGCAATGGACTGATGACCTGAGAAAAAAATTTGATATCCTGAAGAACAAAATGCCTTGGTTTACGGTGCAGTACTCGGGACCTATTGCAGGCATCAAGTTCATCAAGGAGGAGTGGAATTTCAAGGGTAAGCCTACGGTGGTGGTGATGAACCCACAAGGAAAGGTTGAACACTCCAACGCTCTCCACATGATTCGGGTATGGGGAGCCAAGGCCTTCCCTTTCACAAAGACAACAGAAGAAGAACTGTCACATTCTCATGCAGGAAAATGGGTTGGCTCCGTTGTTGAAGGAACTCACCCATCTGTGCACACCTGGATCAAAGAGGATAAGTATATCTTCTTCTATGGCGGTAAAGACAACGAATGGATTCAGCAATTCACAAAGAAAGCGACTGCCCTTGCAAATGATCCAATCTTCAAGCAAGCAAAGATTCACCTAGAGTTGGTCTGCGTCGGAAAAGGTAGCAAAGGAGAAGATGACCATGGCGTTCTAGGCCGTTTCTGGACCAGTGTAGAGAGCCTGTTCTTCACCAAAGGCCACAAGCAGGTGGACTCTGTCAATCAAGAAATCCAGAAGCTTCTCTCTTACAAAAACGAAAGTGGATGGGCGGTGCTTAGCAAAGGGTCGACTGTGTTGGTCACAGGTCATGGTGTCTCGGTGTTGAAGGTGGTTGAGGACTTTGAGATATGGAAGGACCATGTCAAGGAGAAAGGGTTTGAGTTTTGTTTCAAGGCCTATCATGAGAAGATTAGTCAGGCTAGTCGACCTTGCTGCCGTCTGGACATTCCGGGGTCTAACGGAAAGGTTCCGGAGTCGATGAGGTGCCCTGATTGCCACCGTAATATGGAGACTTTTATCAGTTACAAGTGCTGCCACATTGATGGTCCTACTACACATCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SEO_C SEO_N

Protein Analysis

505

Amino Acids

57.43

Weight (kDa)

8.15

Isoelectric Point (pI)

33.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SEO_N PF14576 1 - 154 2.1e-54 Sieve element occlusion N-terminus
SEO_C PF14577 298 - 362 1.5e-14 Sieve element occlusion C-terminus
SEO_C PF14577 371 - 496 1.3e-34 Sieve element occlusion C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000511)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02370 FvH4_4g02370 FvH4_4g02370 FvH4_4g02430 FvH4_4g02430 FvH4_4g02460 FvH4_4g02460 FvH4_4g02460 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_6g05920
malus_domestica MD00G1111000.v1.1 MD08G1225800.v1.1 MD13G1205700.v1.1 MD13G1205800.v1.1 MD13G1205900.v1.1 MD13G1206000.v1.1 MD16G1207500.v1.1 MD16G1207600.v1.1
prunus_persica Prupe.1G028400_v2.0.a1 Prupe.1G028500_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028900_v2.0.a1 Prupe.1G029000_v2.0.a1 Prupe.1G029100_v2.0.a1
pyrus_communis pycom08g19680 pycom08g19730 pycom16g17460 pycom16g17500
rosa_chinensis RchiOBHm_Chr4g0389751 RchiOBHm_Chr4g0389771 RchiOBHm_Chr4g0389791 RchiOBHm_Chr4g0389861 RchiOBHm_Chr4g0389881 RchiOBHm_Chr4g0389901 RchiOBHm_Chr4g0412411
rosa_laevigata RLG00000008288 RLG00000009901 RLG00000009945 RLG00000009954 RLG00000009956 RLG00000009957 RLG00000009958 RLG00000019246
rosa_multiflora Rmu_co8275125.1_g000001 Rmu_sc0002083.1_g000003 Rmu_sc0002083.1_g000025 Rmu_sc0002604.1_g000016 Rmu_sc0004336.1_g000031 Rmu_sc0010423.1_g000003
rosa_roxburghii Rroxscaffold_5G00335790 Rroxscaffold_5G00335850 Rroxscaffold_5G00335970 Rroxscaffold_5G00335990
rosa_rugosa Rorug03G0325100 Rorug03G0325300 Rorug03G0325500.1 Rorug03G0326800 Rorug03G0327000 Rorug04G0104400
rosa_samantha Rh4AG029900 Rh4AG030000 Rh4AG030100 Rh4AG030200 Rh4AG030600 Rh4AG172900 Rh4BG023200 Rh4BG023900 Rh4BG024000 Rh4BG024100 Rh4BG172200 Rh4DG023300 Rh4DG023800 Rh4DG023900 Rh4DG024000 Rh4DG151600
rosa_wichuraiana Rw1G002330 Rw1G002340 Rw4G002260 Rw4G002270 Rw4G002280 Rw4G002300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1147
AatII GACGTC 1 cut(s) 522
Acc36I ACCTGC 1 cut(s) 1147
AccB1I GGYRCC 1 cut(s) 1434
AccI GTMKAC 2 cut(s) 1238, 1375
AccII CGCG 1 cut(s) 156
AccIII TCCGGA 1 cut(s) 1420
AciI CCGC 2 cut(s) 960, 1220
AclWI GGATC 4 cut(s) 372, 547, 935, 1013
AcsI RAATTY 3 cut(s) 131, 638, 727
AcuI CTGAAG 1 cut(s) 671
AcyI GRCGYC 1 cut(s) 519
AfaI GTAC 1 cut(s) 683
AfiI CCNNNNNNNGG 6 cut(s) 271, 698, 1054, 1156, 1315, 1456
AgsI TTSAA 8 cut(s) 310, 547, 733, 779, 899, 1030, 1276, 1342
AhlI ACTAGT 1 cut(s) 437
AjnI CCWGG 3 cut(s) 16, 141, 923
AleI CACNNNNGTG 1 cut(s) 44
AluBI AGCT 7 cut(s) 64, 110, 151, 226, 256, 455, 1189
AluI AGCT 7 cut(s) 64, 110, 151, 226, 256, 455, 1189
Alw21I GWGCWC 1 cut(s) 921
Alw26I GTCTC 5 cut(s) 15, 526, 567, 1270, 1454
Alw44I GTGCAC 1 cut(s) 917
AlwI GGATC 4 cut(s) 372, 547, 935, 1013
Ama87I CYCGRG 1 cut(s) 685
Aor13HI TCCGGA 1 cut(s) 1420
AoxI GGCC 5 cut(s) 273, 822, 1105, 1147, 1344
ApaLI GTGCAC 1 cut(s) 917
ApeKI GCWGC 5 cut(s) 107, 148, 226, 1383, 1482
ApoI RAATTY 3 cut(s) 131, 638, 727
Asp700I GAANNNNTTC 1 cut(s) 978
AspLEI GCGC 2 cut(s) 148, 237
AspS9I GGNCC 4 cut(s) 689, 1116, 1306, 1496
AsuC2I CCSGG 1 cut(s) 1401
AsuHPI GGTGA 5 cut(s) 140, 766, 899, 1037, 1132
AvaI CYCGRG 1 cut(s) 685
AvaII GGWCC 4 cut(s) 689, 1116, 1306, 1496
AxyI CCTNAGG 1 cut(s) 479
BaeGI GKGCMC 2 cut(s) 921, 1439
BanI GGYRCC 1 cut(s) 1434
BarI GAAGNNNNNNTAC 2 cut(s) 935, 967
BauI CACGAG 1 cut(s) 557
Bbv12I GWGCWC 1 cut(s) 921
BbvI GCAGC 5 cut(s) 119, 160, 213, 1370, 1469
BccI CCATC 3 cut(s) 919, 1209, 1487
BceAI ACGGC 3 cut(s) 202, 1092, 1371
BcgI CGANNNNNNTGC 2 cut(s) 1365, 1399
BciT130I CCWGG 3 cut(s) 18, 143, 925
BclI TGATCA 1 cut(s) 267
BcnI CCSGG 1 cut(s) 1401
BcoDI GTCTC 5 cut(s) 15, 526, 567, 1270, 1454
BcuI ACTAGT 1 cut(s) 437
BfaI CTAG 6 cut(s) 104, 438, 515, 1049, 1103, 1371
BfmI CTRYAG 1 cut(s) 459
BfuAI ACCTGC 1 cut(s) 1147
BisI GCNGC 5 cut(s) 108, 149, 227, 1384, 1483
BlpI GCTNAGC 1 cut(s) 1226
BlsI GCNGC 5 cut(s) 109, 150, 228, 1385, 1484
BmcAI AGTACT 1 cut(s) 683
Bme1390I CCNGG 4 cut(s) 18, 143, 925, 1401
Bme18I GGWCC 4 cut(s) 689, 1116, 1306, 1496
BmeT110I CYCGRG 1 cut(s) 685
BmgT120I GGNCC 4 cut(s) 689, 1116, 1306, 1496
BmiI GGNNCC 6 cut(s) 140, 690, 817, 889, 1419, 1436
BmrFI CCNGG 4 cut(s) 18, 143, 925, 1401
BmsI GCATC 3 cut(s) 101, 306, 711
BpmI CTGGAG 2 cut(s) 39, 197
Bpu1102I GCTNAGC 1 cut(s) 1226
BpuEI CTTGAG 1 cut(s) 272
BpuMI CCSGG 1 cut(s) 1401
BsaBI GATNNNNATC 1 cut(s) 473
BsaHI GRCGYC 1 cut(s) 519
BsaJI CCNNGG 5 cut(s) 360, 665, 819, 1093, 1400
BsaWI WCCGGW 2 cut(s) 373, 1420
BsaXI ACNNNNNCTCC 2 cut(s) 1310, 1340
Bsc4I CCNNNNNNNGG 6 cut(s) 271, 698, 1054, 1156, 1315, 1456
Bse1I ACTGG 2 cut(s) 304, 1119
Bse21I CCTNAGG 1 cut(s) 479
Bse3DI GCAATG 2 cut(s) 11, 620
Bse8I GATNNNNATC 1 cut(s) 473
BseAI TCCGGA 1 cut(s) 1420
BseBI CCWGG 3 cut(s) 18, 143, 925
BseDI CCNNGG 5 cut(s) 360, 665, 819, 1093, 1400
BseGI GGATG 2 cut(s) 474, 1220
BseJI GATNNNNATC 1 cut(s) 473
BseLI CCNNNNNNNGG 6 cut(s) 271, 698, 1054, 1156, 1315, 1456
BseMI GCAATG 2 cut(s) 11, 620
BseMII CTCAG 1 cut(s) 620
BseNI ACTGG 2 cut(s) 304, 1119
BseRI GAGGAG 2 cut(s) 200, 734
BseSI GKGCMC 2 cut(s) 921, 1439
BseXI GCAGC 5 cut(s) 119, 160, 213, 1370, 1469
BsgI GTGCAG 2 cut(s) 212, 698
Bsh1236I CGCG 1 cut(s) 156
BshFI GGCC 5 cut(s) 275, 824, 1107, 1149, 1346
BshNI GGYRCC 1 cut(s) 1434
BsiHKAI GWGCWC 1 cut(s) 921
BsiHKCI CYCGRG 1 cut(s) 685
BsiSI CCGG 3 cut(s) 374, 1400, 1421
BslFI GGGAC 3 cut(s) 185, 326, 702
BslI CCNNNNNNNGG 6 cut(s) 271, 698, 1054, 1156, 1315, 1456
BsmAI GTCTC 5 cut(s) 15, 526, 567, 1270, 1454
BsmBI CGTCTC 2 cut(s) 15, 526
BsmFI GGGAC 3 cut(s) 185, 326, 702
BsmI GAATGC 1 cut(s) 299
BsnI GGCC 5 cut(s) 275, 824, 1107, 1149, 1346
BsoBI CYCGRG 1 cut(s) 685
Bsp1286I GDGCHC 2 cut(s) 921, 1439
Bsp13I TCCGGA 1 cut(s) 1420
Bsp143I GATC 8 cut(s) 267, 288, 364, 423, 468, 552, 927, 1018
Bsp1720I GCTNAGC 1 cut(s) 1226
Bsp19I CCATGG 1 cut(s) 1093
Bsp68I TCGCGA 1 cut(s) 156
BspACI CCGC 2 cut(s) 960, 1220
BspANI GGCC 5 cut(s) 275, 824, 1107, 1149, 1346
BspCNI CTCAG 1 cut(s) 621
BspEI TCCGGA 1 cut(s) 1420
BspFNI CGCG 1 cut(s) 156
BspHI TCATGA 1 cut(s) 1351
BspLI GGNNCC 6 cut(s) 140, 690, 817, 889, 1419, 1436
BspMI ACCTGC 1 cut(s) 1147
BspPI GGATC 4 cut(s) 372, 547, 935, 1013
BspT107I GGYRCC 1 cut(s) 1434
BsrDI GCAATG 2 cut(s) 11, 620
BsrI ACTGG 2 cut(s) 304, 1119
BssECI CCNNGG 5 cut(s) 360, 665, 819, 1093, 1400
BssMI GATC 8 cut(s) 267, 288, 364, 423, 468, 552, 927, 1018
BssNI GRCGYC 1 cut(s) 519
BssSI CACGAG 1 cut(s) 557
BssT1I CCWWGG 4 cut(s) 360, 665, 819, 1093
Bst2BI CACGAG 1 cut(s) 557
Bst2UI CCWGG 3 cut(s) 18, 143, 925
Bst4CI ACNGT 7 cut(s) 46, 403, 676, 748, 858, 1243, 1451
BstACI GRCGYC 1 cut(s) 519
BstAPI GCANNNNNTGC 1 cut(s) 113
BstC8I GCNNGC 4 cut(s) 11, 239, 700, 1035
BstDEI CTNAG 4 cut(s) 420, 479, 629, 1226
BstDSI CCRYGG 1 cut(s) 1093
BstENI CCTNNNNNAGG 2 cut(s) 269, 696
BstF5I GGATG 2 cut(s) 474, 1220
BstFNI CGCG 1 cut(s) 156
BstHHI GCGC 2 cut(s) 148, 237
BstKTI GATC 8 cut(s) 270, 291, 367, 426, 471, 555, 930, 1021
BstMAI GTCTC 5 cut(s) 15, 526, 567, 1270, 1454
BstMBI GATC 8 cut(s) 267, 288, 364, 423, 468, 552, 927, 1018
BstMWI GCNNNNNNNGC 7 cut(s) 10, 113, 145, 223, 232, 1104, 1443
BstNI CCWGG 3 cut(s) 18, 143, 925
BstSCI CCNGG 4 cut(s) 16, 141, 923, 1399
BstSFI CTRYAG 1 cut(s) 459
BstSLI GKGCMC 2 cut(s) 921, 1439
BstUI CGCG 1 cut(s) 156
BstV1I GCAGC 5 cut(s) 119, 160, 213, 1370, 1469
BstXI CCANNNNNNTGG 1 cut(s) 1493
Bsu36I CCTNAGG 1 cut(s) 479
BsuRI GGCC 5 cut(s) 275, 824, 1107, 1149, 1346
BtgI CCRYGG 1 cut(s) 1093
BtsCI GGATG 2 cut(s) 474, 1220
BtsIMutI CAGTG 4 cut(s) 51, 95, 399, 1126
BtuMI TCGCGA 1 cut(s) 156
BveI ACCTGC 1 cut(s) 1147
Cac8I GCNNGC 4 cut(s) 11, 239, 700, 1035
CciI TCATGA 1 cut(s) 1351
CfoI GCGC 2 cut(s) 148, 237
Cfr13I GGNCC 4 cut(s) 689, 1116, 1306, 1496
CseI GACGC 1 cut(s) 1051
Csp6I GTAC 1 cut(s) 682
CviAII CATG 7 cut(s) 78, 799, 869, 1094, 1259, 1310, 1352
CviQI GTAC 1 cut(s) 682
DdeI CTNAG 4 cut(s) 420, 479, 629, 1226
DpnI GATC 8 cut(s) 269, 290, 366, 425, 470, 554, 929, 1020
DpnII GATC 8 cut(s) 267, 288, 364, 423, 468, 552, 927, 1018
Eco130I CCWWGG 4 cut(s) 360, 665, 819, 1093
Eco147I AGGCCT 2 cut(s) 824, 1346
Eco32I GATATC 1 cut(s) 646
Eco47I GGWCC 4 cut(s) 689, 1116, 1306, 1496
Eco57I CTGAAG 1 cut(s) 671
Eco81I CCTNAGG 1 cut(s) 479
Eco88I CYCGRG 1 cut(s) 685
EcoNI CCTNNNNNAGG 2 cut(s) 269, 696
EcoO109I RGGNCCY 1 cut(s) 689
EcoRI GAATTC 1 cut(s) 131
EcoRII CCWGG 3 cut(s) 16, 141, 923
EcoRV GATATC 1 cut(s) 646
EcoT14I CCWWGG 4 cut(s) 360, 665, 819, 1093
EcoT22I ATGCAT 1 cut(s) 299
ErhI CCWWGG 4 cut(s) 360, 665, 819, 1093
Esp3I CGTCTC 2 cut(s) 15, 526
FaeI CATG 7 cut(s) 81, 802, 872, 1097, 1262, 1313, 1355
FalI AAGNNNNNCTT 2 cut(s) 932, 964
FaqI GGGAC 3 cut(s) 185, 326, 702
FatI CATG 7 cut(s) 77, 798, 868, 1093, 1258, 1309, 1351
FbaI TGATCA 1 cut(s) 267
FblI GTMKAC 2 cut(s) 1238, 1375
Fnu4HI GCNGC 5 cut(s) 108, 149, 227, 1384, 1483
FokI GGATG 2 cut(s) 461, 1227
Fsp4HI GCNGC 5 cut(s) 108, 149, 227, 1384, 1483
FspBI CTAG 6 cut(s) 104, 438, 515, 1049, 1103, 1371
GlaI GCGC 2 cut(s) 147, 236
GluI GCNGC 5 cut(s) 108, 149, 227, 1384, 1483
GsuI CTGGAG 2 cut(s) 39, 197
HaeIII GGCC 5 cut(s) 275, 824, 1107, 1149, 1346
HapII CCGG 3 cut(s) 374, 1400, 1421
HgaI GACGC 1 cut(s) 1051
HhaI GCGC 2 cut(s) 148, 237
Hin1I GRCGYC 1 cut(s) 519
Hin1II CATG 7 cut(s) 81, 802, 872, 1097, 1262, 1313, 1355
Hin6I GCGC 2 cut(s) 146, 235
HinP1I GCGC 2 cut(s) 146, 235
HincII GTYRAC 2 cut(s) 1239, 1376
HindII GTYRAC 2 cut(s) 1239, 1376
HindIII AAGCTT 1 cut(s) 1187
HinfI GANTC 8 cut(s) 158, 198, 598, 802, 979, 1042, 1163, 1424
HpaII CCGG 3 cut(s) 374, 1400, 1421
HphI GGTGA 5 cut(s) 140, 766, 899, 1037, 1132
Hpy166II GTNNAC 6 cut(s) 564, 672, 919, 1162, 1239, 1376
Hpy188I TCNGA 4 cut(s) 163, 223, 526, 1067
Hpy8I GTNNAC 6 cut(s) 564, 672, 919, 1162, 1239, 1376
Hpy99I CGWCG 1 cut(s) 1067
HpyAV CCTTC 4 cut(s) 835, 893, 1270, 1297
HpyCH4III ACNGT 7 cut(s) 46, 403, 676, 748, 858, 1243, 1451
HpyCH4IV ACGT 1 cut(s) 519
HpyF10VI GCNNNNNNNGC 7 cut(s) 10, 113, 145, 223, 232, 1104, 1443
HpyF3I CTNAG 4 cut(s) 420, 479, 629, 1226
HpySE526I ACGT 1 cut(s) 519
Hsp92I GRCGYC 1 cut(s) 519
Hsp92II CATG 7 cut(s) 81, 802, 872, 1097, 1262, 1313, 1355
HspAI GCGC 2 cut(s) 146, 235
Kpn2I TCCGGA 1 cut(s) 1420
Ksp22I TGATCA 1 cut(s) 267
Kzo9I GATC 8 cut(s) 267, 288, 364, 423, 468, 552, 927, 1018
LmnI GCTCC 4 cut(s) 144, 610, 815, 893
Lsp1109I GCAGC 5 cut(s) 119, 160, 213, 1370, 1469
LweI GCATC 3 cut(s) 101, 306, 711
MaeI CTAG 6 cut(s) 104, 438, 515, 1049, 1103, 1371
MaeII ACGT 1 cut(s) 519
MaeIII GTNAC 3 cut(s) 858, 1249, 1472
MalI GATC 8 cut(s) 269, 290, 366, 425, 470, 554, 929, 1020
MboI GATC 8 cut(s) 267, 288, 364, 423, 468, 552, 927, 1018
MboII GAAGA 9 cut(s) 664, 860, 863, 940, 943, 1018, 1097, 1129, 1369
MfeI CAATTG 2 cut(s) 180, 603
MhlI GDGCHC 2 cut(s) 921, 1439
MluCI AATT 7 cut(s) 131, 180, 246, 603, 638, 727, 986
MlyI GAGTC 3 cut(s) 207, 1157, 1433
MmeI TCCRAC 2 cut(s) 810, 1045
MnlI CCTC 7 cut(s) 24, 200, 221, 712, 928, 1279, 1425
Mph1103I ATGCAT 1 cut(s) 299
MroI TCCGGA 1 cut(s) 1420
MroXI GAANNNNTTC 1 cut(s) 978
MseI TTAA 3 cut(s) 258, 465, 1513
MslI CAYNNNNRTG 3 cut(s) 44, 867, 1491
MspI CCGG 3 cut(s) 374, 1400, 1421
MspR9I CCNGG 4 cut(s) 18, 143, 925, 1401
MunI CAATTG 2 cut(s) 180, 603
Mva1269I GAATGC 1 cut(s) 299
MvaI CCWGG 3 cut(s) 18, 143, 925
MvnI CGCG 1 cut(s) 156
MwoI GCNNNNNNNGC 7 cut(s) 10, 113, 145, 223, 232, 1104, 1443
NciI CCSGG 1 cut(s) 1401
NcoI CCATGG 1 cut(s) 1093
NdeII GATC 8 cut(s) 267, 288, 364, 423, 468, 552, 927, 1018
NlaIII CATG 7 cut(s) 81, 802, 872, 1097, 1262, 1313, 1355
NlaIV GGNNCC 6 cut(s) 140, 690, 817, 889, 1419, 1436
NmuCI GTSAC 2 cut(s) 858, 1249
NruI TCGCGA 1 cut(s) 156
NsiI ATGCAT 1 cut(s) 299
OliI CACNNNNGTG 1 cut(s) 44
PagI TCATGA 1 cut(s) 1351
PaqCI CACCTGC 1 cut(s) 1147
PceI AGGCCT 2 cut(s) 824, 1346
PcsI WCGNNNNNNNCGW 2 cut(s) 297, 525
PctI GAATGC 1 cut(s) 299
PdmI GAANNNNTTC 1 cut(s) 978
PfeI GAWTC 5 cut(s) 158, 598, 802, 979, 1042
PflFI GACNNNGTC 2 cut(s) 1166, 1310
PfoI TCCNGGA 1 cut(s) 16
PkrI GCNGC 5 cut(s) 109, 150, 228, 1385, 1484
PleI GAGTC 3 cut(s) 206, 1157, 1432
PpsI GAGTC 3 cut(s) 206, 1157, 1432
PpuMI RGGWCCY 1 cut(s) 689
Psp5II RGGWCCY 1 cut(s) 689
Psp6I CCWGG 3 cut(s) 16, 141, 923
PspGI CCWGG 3 cut(s) 16, 141, 923
PspN4I GGNNCC 6 cut(s) 140, 690, 817, 889, 1419, 1436
PspPI GGNCC 4 cut(s) 689, 1116, 1306, 1496
PspPPI RGGWCCY 1 cut(s) 689
PsyI GACNNNGTC 2 cut(s) 1166, 1310
RruI TCGCGA 1 cut(s) 156
RsaI GTAC 1 cut(s) 683
RsaNI GTAC 1 cut(s) 682
RseI CAYNNNNRTG 3 cut(s) 44, 867, 1491
SalI GTCGAC 2 cut(s) 1237, 1374
SaqAI TTAA 3 cut(s) 258, 465, 1513
SatI GCNGC 5 cut(s) 108, 149, 227, 1384, 1483
Sau3AI GATC 8 cut(s) 267, 288, 364, 423, 468, 552, 927, 1018
Sau96I GGNCC 4 cut(s) 689, 1116, 1306, 1496
ScaI AGTACT 1 cut(s) 683
SchI GAGTC 3 cut(s) 207, 1157, 1433
ScrFI CCNGG 4 cut(s) 18, 143, 925, 1401
SduI GDGCHC 2 cut(s) 921, 1439
SfaNI GCATC 3 cut(s) 101, 306, 711
SfcI CTRYAG 1 cut(s) 459
SinI GGWCC 4 cut(s) 689, 1116, 1306, 1496
SmiMI CAYNNNNRTG 3 cut(s) 44, 867, 1491
SmlI CTYRAG 1 cut(s) 251
SmoI CTYRAG 1 cut(s) 251
SpeI ACTAGT 1 cut(s) 437
Sse9I AATT 7 cut(s) 131, 180, 246, 603, 638, 727, 986
SseBI AGGCCT 2 cut(s) 824, 1346
SsiI CCGC 2 cut(s) 960, 1220
SspMI CTAG 6 cut(s) 104, 438, 515, 1049, 1103, 1371
StuI AGGCCT 2 cut(s) 824, 1346
StyD4I CCNGG 4 cut(s) 16, 141, 923, 1399
StyI CCWWGG 4 cut(s) 360, 665, 819, 1093
TaaI ACNGT 7 cut(s) 46, 403, 676, 748, 858, 1243, 1451
TaiI ACGT 1 cut(s) 522
TaqI TCGA 8 cut(s) 291, 300, 353, 471, 539, 1238, 1375, 1427
TasI AATT 7 cut(s) 131, 180, 246, 603, 638, 727, 986
TatI WGTACW 1 cut(s) 681
TfiI GAWTC 5 cut(s) 158, 598, 802, 979, 1042
Tru1I TTAA 3 cut(s) 258, 465, 1513
Tru9I TTAA 3 cut(s) 258, 465, 1513
TscAI CASTG 4 cut(s) 51, 102, 406, 1126
TseFI GTSAC 2 cut(s) 858, 1249
TseI GCWGC 5 cut(s) 107, 148, 226, 1383, 1482
Tsp45I GTSAC 2 cut(s) 858, 1249
TspDTI ATGAA 4 cut(s) 66, 493, 700, 773
TspGWI ACGGA 2 cut(s) 880, 1425
TspRI CASTG 4 cut(s) 51, 102, 406, 1126
Tth111I GACNNNGTC 2 cut(s) 1166, 1310
VneI GTGCAC 1 cut(s) 917
VpaK11BI GGWCC 4 cut(s) 689, 1116, 1306, 1496
XagI CCTNNNNNAGG 2 cut(s) 269, 696
XapI RAATTY 3 cut(s) 131, 638, 727
XmiI GTMKAC 2 cut(s) 1238, 1375
XmnI GAANNNNTTC 1 cut(s) 978
XspI CTAG 6 cut(s) 104, 438, 515, 1049, 1103, 1371
ZraI GACGTC 1 cut(s) 520
ZrmI AGTACT 1 cut(s) 683
Zsp2I ATGCAT 1 cut(s) 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.