Rorug03G0325300

Sieve element occlusion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000511
Physical Location & Seq
Reverse (-)
35739564 .. 35742461
2898 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0325300.1

Sequence Viewer

Length: 1509 bp
ATGAGCAGAACAAAGCGACACCGTGATCACCCACCTCCTTCCTCTCCTTGTCGAAACCCTAGTCAACCCAAACCCGAACCCGAACCCGAACCGGCGAAGAAACACCACCAATCCGACCCTACCTTTCCCTCATACCTGGACACTCCCAATCCCTTACCCCCCAAAATCAAACTGCTGTGTGCAATTGTGGCCGAAATCCACTGTCTCTCCGTCGAAGAAACGTTGAACGACACTGGTATTCGAGTGACCCAGCAAGACGTTGAAGAGGTCCTCAAGCTCTCCTACGCCTTCCCGAGCCCTGCCCTCAAGTTCTTTCGGTGGTCCGGTCGTCAGCTCAATGAAGACCACAGCCCATATTCGTGGAATCTGGTTGTTGATCTGTTGGGCAAGAATTGCTTCTTTGATGCCATGTGGGACGCCATCAAGTCAATGAAGCAGGAAAGGTTACTCTCTTTGGCCACTTTTGCTTCTGTTTTTAGTAGTTATGTAGTTGCCCATCGCACTCCCGAGGCTCTTATGACATTTGAGGTTATGGACCAATATGGTGTTCCTACAGATATTGTAGCATTGAATTCTCTTTTGAGTGCAATTTGTAGAGATGGCAAGACGGCCGACGCCCTTGATTTTTACTACATTGCTAAGGACAAGATCAGGCCGGACCCCGATACTTACGCCATCTTGTTGGAGGGGTGGGAGAGCGAAGGCAATGTAGCCTCGGCTACCAAGGTTTTGGATGAGATGGTGAGTCAGATTGGTTGGGATCCAACCAATGTGCCCGCCTACGATTCATATCTGAACACTTTGCTTAACGGGCCTAATGGGATTCGCCAGGCGCTGGACTTCTTTGAGACCTTGAAAGCGAAGAGGTGTTATCCAGGGGTCAAGTTTTTCAGGCTTGCACTTGATGAGTGTGTCAAGAAAGGCGATGCTAGGGGAGCTGAGGCTCTTTGGGAGCCAATGGTAGGCAGACTTGGTTTGCAACCTGATACCAATATGTATAATTTGATGATTTCTTTGCATTGCCATGGAAACAATATTAATGTAGCAAAAAGGATGCTGGATGAGATGGTCTACAATGGGGCATTTCCAAATTCGCAAACATATAACATGTTGTTTAAGATGCTCATTAAGAATAGGAAGTTACAGGAGGCTGGGGTTTTGTTTACTGAGATGATTAAAAATGAGTGTGTTCTGGACCAGGATAATTGTATTGCTGCAGTCAGGATATACTTGGATTTGGGGGACCCTTATTTTGCTATAAAAGTCTGGAAGTTTATGATAGAAAATTACCATTCTGGCTTGGAGGACACTGGGAATTTGTTGGTTCTAGGACTTCGCAATCTGAACAGAGTCCCAGAAGCAGTCAAGTATGCAGAGGATATGATGCTAAGAGGAATCAAGTTGAGTTCTTCTTCAATGTCAAAACTCAAAGACAGCCTTGTCCAAGCAAAGAAGCAATACATGTATGATGAACTTTTGAGAAAGTCGAAAGCTCAGCAGCTAGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SEO_C SEO_N

Protein Analysis

502

Amino Acids

56.89

Weight (kDa)

6.25

Isoelectric Point (pI)

44.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 323 - 376 8.1e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 328 - 376 1.5e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000511)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g02370 FvH4_4g02370 FvH4_4g02370 FvH4_4g02430 FvH4_4g02430 FvH4_4g02460 FvH4_4g02460 FvH4_4g02460 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_4g02480 FvH4_6g05920
malus_domestica MD00G1111000.v1.1 MD08G1225800.v1.1 MD13G1205700.v1.1 MD13G1205800.v1.1 MD13G1205900.v1.1 MD13G1206000.v1.1 MD16G1207500.v1.1 MD16G1207600.v1.1
prunus_persica Prupe.1G028400_v2.0.a1 Prupe.1G028500_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028800_v2.0.a1 Prupe.1G028900_v2.0.a1 Prupe.1G029000_v2.0.a1 Prupe.1G029100_v2.0.a1
pyrus_communis pycom08g19680 pycom08g19730 pycom16g17460 pycom16g17500
rosa_chinensis RchiOBHm_Chr4g0389751 RchiOBHm_Chr4g0389771 RchiOBHm_Chr4g0389791 RchiOBHm_Chr4g0389861 RchiOBHm_Chr4g0389881 RchiOBHm_Chr4g0389901 RchiOBHm_Chr4g0412411
rosa_laevigata RLG00000008288 RLG00000009901 RLG00000009945 RLG00000009954 RLG00000009956 RLG00000009957 RLG00000009958 RLG00000019246
rosa_multiflora Rmu_co8275125.1_g000001 Rmu_sc0002083.1_g000003 Rmu_sc0002083.1_g000025 Rmu_sc0002604.1_g000016 Rmu_sc0004336.1_g000031 Rmu_sc0010423.1_g000003
rosa_roxburghii Rroxscaffold_5G00335790 Rroxscaffold_5G00335850 Rroxscaffold_5G00335970 Rroxscaffold_5G00335990
rosa_rugosa Rorug03G0325100 Rorug03G0325300 Rorug03G0325500.1 Rorug03G0326800 Rorug03G0327000 Rorug04G0104400
rosa_samantha Rh4AG029900 Rh4AG030000 Rh4AG030100 Rh4AG030200 Rh4AG030600 Rh4AG172900 Rh4BG023200 Rh4BG023900 Rh4BG024000 Rh4BG024100 Rh4BG172200 Rh4DG023300 Rh4DG023800 Rh4DG023900 Rh4DG024000 Rh4DG151600
rosa_wichuraiana Rw1G002330 Rw1G002340 Rw4G002260 Rw4G002270 Rw4G002280 Rw4G002300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1439
AccB7I CCANNNNNTGG 1 cut(s) 835
AccI GTMKAC 1 cut(s) 1071
AciI CCGC 1 cut(s) 777
AclI AACGTT 1 cut(s) 221
AclWI GGATC 2 cut(s) 755, 768
AcoI YGGCCR 3 cut(s) 189, 456, 609
AcsI RAATTY 3 cut(s) 571, 1090, 1315
AcyI GRCGYC 2 cut(s) 417, 615
AfiI CCNNNNNNNGG 2 cut(s) 835, 962
AflIII ACRYGT 2 cut(s) 1107, 1461
AgsI TTSAA 5 cut(s) 226, 263, 571, 856, 1416
AjnI CCWGG 4 cut(s) 135, 828, 874, 1197
AjuI GAANNNNNNNTTGG 2 cut(s) 531, 563
AluBI AGCT 5 cut(s) 277, 334, 938, 1493, 1501
AluI AGCT 5 cut(s) 277, 334, 938, 1493, 1501
Alw26I GTCTC 2 cut(s) 209, 842
AlwI GGATC 2 cut(s) 755, 768
AlwNI CAGNNNCTG 1 cut(s) 835
Ama87I CYCGRG 2 cut(s) 292, 506
AoxI GGCC 5 cut(s) 189, 456, 609, 653, 812
ApeKI GCWGC 2 cut(s) 1214, 1498
ApoI RAATTY 3 cut(s) 571, 1090, 1315
ArsI GACNNNNNNTTYG 4 cut(s) 46, 78, 1235, 1267
AseI ATTAAT 1 cut(s) 1038
Asp700I GAANNNNTTC 1 cut(s) 395
AspLEI GCGC 1 cut(s) 835
AspS9I GGNCC 7 cut(s) 268, 321, 535, 658, 812, 1195, 1243
AsuHPI GGTGA 2 cut(s) 20, 754
AvaI CYCGRG 2 cut(s) 292, 506
AvaII GGWCC 6 cut(s) 268, 321, 535, 658, 1195, 1243
BaeGI GKGCMC 1 cut(s) 777
BalI TGGCCA 1 cut(s) 458
BamHI GGATCC 1 cut(s) 760
BanII GRGCYC 1 cut(s) 299
BbsI GAAGAC 1 cut(s) 348
BbvCI CCTCAGC 1 cut(s) 939
BbvI GCAGC 1 cut(s) 1201
BccI CCATC 6 cut(s) 428, 504, 593, 683, 733, 1060
BceAI ACGGC 1 cut(s) 624
BciT130I CCWGG 4 cut(s) 137, 830, 876, 1199
BclI TGATCA 1 cut(s) 25
BcoDI GTCTC 2 cut(s) 209, 842
BfaI CTAG 4 cut(s) 60, 930, 1328, 1502
BfmI CTRYAG 2 cut(s) 552, 1215
BfoI RGCGCY 1 cut(s) 836
BisI GCNGC 2 cut(s) 1215, 1499
BlpI GCTNAGC 1 cut(s) 1494
BlsI GCNGC 2 cut(s) 1216, 1500
Bme1390I CCNGG 4 cut(s) 137, 830, 876, 1199
Bme18I GGWCC 6 cut(s) 268, 321, 535, 658, 1195, 1243
BmeT110I CYCGRG 2 cut(s) 292, 506
BmgT120I GGNCC 7 cut(s) 268, 321, 535, 658, 812, 1195, 1243
BmiI GGNNCC 5 cut(s) 660, 762, 954, 1244, 1245
BmrFI CCNGG 4 cut(s) 137, 830, 876, 1199
BmrI ACTGGG 1 cut(s) 1320
BmsI GCATC 5 cut(s) 394, 916, 1044, 1110, 1374
BmuI ACTGGG 1 cut(s) 1320
BpiI GAAGAC 1 cut(s) 348
Bpu10I CCTNAGC 2 cut(s) 639, 939
Bpu1102I GCTNAGC 1 cut(s) 1494
BpuEI CTTGAG 2 cut(s) 257, 290
BsaBI GATNNNNATC 1 cut(s) 789
BsaHI GRCGYC 2 cut(s) 417, 615
BsaI GGTCTC 1 cut(s) 842
BsaJI CCNNGG 5 cut(s) 507, 714, 723, 875, 1024
BsaWI WCCGGW 1 cut(s) 323
BsaXI ACNNNNNCTCC 2 cut(s) 191, 221
Bsc4I CCNNNNNNNGG 2 cut(s) 835, 962
Bse118I RCCGGY 1 cut(s) 91
Bse1I ACTGG 2 cut(s) 238, 1315
Bse3DI GCAATG 3 cut(s) 633, 712, 1018
Bse8I GATNNNNATC 1 cut(s) 789
BseBI CCWGG 4 cut(s) 137, 830, 876, 1199
BseDI CCNNGG 5 cut(s) 507, 714, 723, 875, 1024
BseGI GGATG 3 cut(s) 739, 1059, 1066
BseJI GATNNNNATC 1 cut(s) 789
BseLI CCNNNNNNNGG 2 cut(s) 835, 962
BseMI GCAATG 3 cut(s) 633, 712, 1018
BseMII CTCAG 3 cut(s) 930, 1158, 1508
BseNI ACTGG 2 cut(s) 238, 1315
BseSI GKGCMC 1 cut(s) 777
BseX3I CGGCCG 1 cut(s) 609
BseXI GCAGC 1 cut(s) 1201
BseYI CCCAGC 2 cut(s) 249, 1151
Bsh1285I CGRYCG 2 cut(s) 328, 612
BshFI GGCC 5 cut(s) 191, 458, 611, 655, 814
BsiEI CGRYCG 2 cut(s) 328, 612
BsiHKCI CYCGRG 2 cut(s) 292, 506
BsiSI CCGG 3 cut(s) 92, 324, 656
BslFI GGGAC 3 cut(s) 428, 1256, 1337
BslI CCNNNNNNNGG 2 cut(s) 835, 962
BsmAI GTCTC 2 cut(s) 209, 842
BsmFI GGGAC 3 cut(s) 428, 1256, 1337
BsnI GGCC 5 cut(s) 191, 458, 611, 655, 814
Bso31I GGTCTC 1 cut(s) 842
BsoBI CYCGRG 2 cut(s) 292, 506
Bsp1286I GDGCHC 2 cut(s) 299, 777
Bsp143I GATC 4 cut(s) 25, 376, 648, 760
Bsp1720I GCTNAGC 1 cut(s) 1494
Bsp19I CCATGG 1 cut(s) 1024
BspACI CCGC 1 cut(s) 777
BspANI GGCC 5 cut(s) 191, 458, 611, 655, 814
BspCNI CTCAG 3 cut(s) 931, 1159, 1507
BspLI GGNNCC 5 cut(s) 660, 762, 954, 1244, 1245
BspMAI CTGCAG 1 cut(s) 1219
BspPI GGATC 2 cut(s) 755, 768
BspTNI GGTCTC 1 cut(s) 842
BsrDI GCAATG 3 cut(s) 633, 712, 1018
BsrFI RCCGGY 1 cut(s) 91
BsrI ACTGG 2 cut(s) 238, 1315
BssAI RCCGGY 1 cut(s) 91
BssECI CCNNGG 5 cut(s) 507, 714, 723, 875, 1024
BssMI GATC 4 cut(s) 25, 376, 648, 760
BssNI GRCGYC 2 cut(s) 417, 615
BssT1I CCWWGG 2 cut(s) 723, 1024
Bst2UI CCWGG 4 cut(s) 137, 830, 876, 1199
Bst4CI ACNGT 2 cut(s) 23, 203
Bst6I CTCTTC 2 cut(s) 258, 857
BstACI GRCGYC 2 cut(s) 417, 615
BstAPI GCANNNNNTGC 1 cut(s) 393
BstC8I GCNNGC 2 cut(s) 777, 897
BstDEI CTNAG 5 cut(s) 639, 939, 1167, 1388, 1494
BstDSI CCRYGG 1 cut(s) 1024
BstF5I GGATG 3 cut(s) 739, 1059, 1066
BstH2I RGCGCY 1 cut(s) 836
BstHHI GCGC 1 cut(s) 835
BstKTI GATC 4 cut(s) 28, 379, 651, 763
BstMAI GTCTC 2 cut(s) 209, 842
BstMBI GATC 4 cut(s) 25, 376, 648, 760
BstMCI CGRYCG 2 cut(s) 328, 612
BstMWI GCNNNNNNNGC 5 cut(s) 188, 393, 464, 811, 935
BstNI CCWGG 4 cut(s) 137, 830, 876, 1199
BstNSI RCATGY 2 cut(s) 1111, 1465
BstSCI CCNGG 4 cut(s) 135, 828, 874, 1197
BstSFI CTRYAG 2 cut(s) 552, 1215
BstSLI GKGCMC 1 cut(s) 777
BstV1I GCAGC 1 cut(s) 1201
BstV2I GAAGAC 1 cut(s) 348
BstX2I RGATCY 1 cut(s) 760
BstXI CCANNNNNNTGG 3 cut(s) 360, 682, 730
BstYI RGATCY 1 cut(s) 760
BstZI CGGCCG 1 cut(s) 609
BsuRI GGCC 5 cut(s) 191, 458, 611, 655, 814
BtgI CCRYGG 1 cut(s) 1024
BtgZI GCGATG 2 cut(s) 482, 939
BtsCI GGATG 3 cut(s) 739, 1059, 1066
BtsIMutI CAGTG 3 cut(s) 199, 231, 1308
Cac8I GCNNGC 2 cut(s) 777, 897
CaiI CAGNNNCTG 1 cut(s) 835
CfoI GCGC 1 cut(s) 835
Cfr10I RCCGGY 1 cut(s) 91
Cfr13I GGNCC 7 cut(s) 268, 321, 535, 658, 812, 1195, 1243
CseI GACGC 2 cut(s) 425, 623
CviAII CATG 4 cut(s) 409, 1025, 1108, 1462
DdeI CTNAG 5 cut(s) 639, 939, 1167, 1388, 1494
DpnI GATC 4 cut(s) 27, 378, 650, 762
DpnII GATC 4 cut(s) 25, 376, 648, 760
DrdI GACNNNNNNGTC 1 cut(s) 1439
DseDI GACNNNNNNGTC 1 cut(s) 1439
EaeI YGGCCR 3 cut(s) 189, 456, 609
EagI CGGCCG 1 cut(s) 609
Eam1104I CTCTTC 2 cut(s) 258, 857
EarI CTCTTC 2 cut(s) 258, 857
EclXI CGGCCG 1 cut(s) 609
Eco130I CCWWGG 2 cut(s) 723, 1024
Eco24I GRGCYC 1 cut(s) 299
Eco31I GGTCTC 1 cut(s) 842
Eco47I GGWCC 6 cut(s) 268, 321, 535, 658, 1195, 1243
Eco52I CGGCCG 1 cut(s) 609
Eco88I CYCGRG 2 cut(s) 292, 506
EcoO109I RGGNCCY 2 cut(s) 268, 1243
EcoRI GAATTC 1 cut(s) 571
EcoRII CCWGG 4 cut(s) 135, 828, 874, 1197
EcoT14I CCWWGG 2 cut(s) 723, 1024
EcoT38I GRGCYC 1 cut(s) 299
ErhI CCWWGG 2 cut(s) 723, 1024
FaeI CATG 4 cut(s) 412, 1028, 1111, 1465
FalI AAGNNNNNCTT 4 cut(s) 380, 412, 1422, 1454
FaqI GGGAC 3 cut(s) 428, 1256, 1337
FatI CATG 4 cut(s) 408, 1024, 1107, 1461
FauI CCCGC 1 cut(s) 784
FbaI TGATCA 1 cut(s) 25
FblI GTMKAC 1 cut(s) 1071
Fnu4HI GCNGC 2 cut(s) 1215, 1499
FokI GGATG 3 cut(s) 746, 1066, 1073
FriOI GRGCYC 1 cut(s) 299
Fsp4HI GCNGC 2 cut(s) 1215, 1499
FspBI CTAG 4 cut(s) 60, 930, 1328, 1502
GlaI GCGC 1 cut(s) 834
GluI GCNGC 2 cut(s) 1215, 1499
GsaI CCCAGC 2 cut(s) 253, 1155
HaeII RGCGCY 1 cut(s) 836
HaeIII GGCC 5 cut(s) 191, 458, 611, 655, 814
HapII CCGG 3 cut(s) 92, 324, 656
HgaI GACGC 2 cut(s) 425, 623
HhaI GCGC 1 cut(s) 835
Hin1I GRCGYC 2 cut(s) 417, 615
Hin1II CATG 4 cut(s) 412, 1028, 1111, 1465
Hin6I GCGC 1 cut(s) 833
HinP1I GCGC 1 cut(s) 833
HincII GTYRAC 1 cut(s) 65
HindII GTYRAC 1 cut(s) 65
HinfI GANTC 6 cut(s) 364, 745, 785, 823, 1350, 1395
HpaII CCGG 3 cut(s) 92, 324, 656
HphI GGTGA 2 cut(s) 20, 754
Hpy166II GTNNAC 3 cut(s) 65, 1072, 1164
Hpy188I TCNGA 4 cut(s) 115, 750, 795, 1344
Hpy188III TCNNGA 6 cut(s) 292, 506, 916, 1193, 1222, 1267
Hpy8I GTNNAC 3 cut(s) 65, 1072, 1164
Hpy99I CGWCG 2 cut(s) 215, 617
HpyAV CCTTC 3 cut(s) 48, 298, 695
HpyCH4III ACNGT 2 cut(s) 23, 203
HpyCH4IV ACGT 2 cut(s) 221, 258
HpyCH4V TGCA 7 cut(s) 182, 587, 899, 979, 1018, 1217, 1373
HpyF10VI GCNNNNNNNGC 5 cut(s) 188, 393, 464, 811, 935
HpyF3I CTNAG 5 cut(s) 639, 939, 1167, 1388, 1494
HpySE526I ACGT 2 cut(s) 221, 258
Hsp92I GRCGYC 2 cut(s) 417, 615
Hsp92II CATG 4 cut(s) 412, 1028, 1111, 1465
HspAI GCGC 1 cut(s) 833
KflI GGGWCCC 1 cut(s) 1243
Ksp22I TGATCA 1 cut(s) 25
Kzo9I GATC 4 cut(s) 25, 376, 648, 760
LmnI GCTCC 2 cut(s) 935, 952
Lsp1109I GCAGC 1 cut(s) 1201
LweI GCATC 5 cut(s) 394, 916, 1044, 1110, 1374
MaeI CTAG 4 cut(s) 60, 930, 1328, 1502
MaeII ACGT 2 cut(s) 221, 258
MaeIII GTNAC 3 cut(s) 244, 444, 1140
MalI GATC 4 cut(s) 27, 378, 650, 762
MboI GATC 4 cut(s) 25, 376, 648, 760
MboII GAAGA 7 cut(s) 109, 227, 275, 353, 874, 1401, 1404
MfeI CAATTG 1 cut(s) 183
MflI RGATCY 1 cut(s) 760
MhlI GDGCHC 2 cut(s) 299, 777
MlsI TGGCCA 1 cut(s) 458
MluCI AATT 9 cut(s) 183, 391, 571, 588, 1000, 1090, 1204, 1285, 1315
MluNI TGGCCA 1 cut(s) 458
MlyI GAGTC 2 cut(s) 754, 1359
MmeI TCCRAC 3 cut(s) 138, 663, 788
Mox20I TGGCCA 1 cut(s) 458
MroXI GAANNNNTTC 1 cut(s) 395
MscI TGGCCA 1 cut(s) 458
MseI TTAA 6 cut(s) 807, 1038, 1116, 1128, 1176, 1507
MslI CAYNNNNRTG 2 cut(s) 358, 1023
Msp20I TGGCCA 1 cut(s) 458
MspI CCGG 3 cut(s) 92, 324, 656
MspR9I CCNGG 4 cut(s) 137, 830, 876, 1199
MunI CAATTG 1 cut(s) 183
MvaI CCWGG 4 cut(s) 137, 830, 876, 1199
MwoI GCNNNNNNNGC 5 cut(s) 188, 393, 464, 811, 935
NcoI CCATGG 1 cut(s) 1024
NdeII GATC 4 cut(s) 25, 376, 648, 760
NlaIII CATG 4 cut(s) 412, 1028, 1111, 1465
NlaIV GGNNCC 5 cut(s) 660, 762, 954, 1244, 1245
NmeAIII GCCGAG 1 cut(s) 695
NmuCI GTSAC 1 cut(s) 244
NspI RCATGY 2 cut(s) 1111, 1465
PciI ACATGT 2 cut(s) 1107, 1461
PdmI GAANNNNTTC 1 cut(s) 395
PfeI GAWTC 4 cut(s) 364, 785, 823, 1395
PflMI CCANNNNNTGG 1 cut(s) 835
PkrI GCNGC 2 cut(s) 1216, 1500
PleI GAGTC 2 cut(s) 753, 1358
PpsI GAGTC 2 cut(s) 753, 1358
PpuMI RGGWCCY 2 cut(s) 268, 1243
PscI ACATGT 2 cut(s) 1107, 1461
PshBI ATTAAT 1 cut(s) 1038
Psp1406I AACGTT 1 cut(s) 221
Psp5II RGGWCCY 2 cut(s) 268, 1243
Psp6I CCWGG 4 cut(s) 135, 828, 874, 1197
PspFI CCCAGC 2 cut(s) 249, 1151
PspGI CCWGG 4 cut(s) 135, 828, 874, 1197
PspN4I GGNNCC 5 cut(s) 660, 762, 954, 1244, 1245
PspPI GGNCC 7 cut(s) 268, 321, 535, 658, 812, 1195, 1243
PspPPI RGGWCCY 2 cut(s) 268, 1243
PstI CTGCAG 1 cut(s) 1219
PstNI CAGNNNCTG 1 cut(s) 835
PsuI RGATCY 1 cut(s) 760
RseI CAYNNNNRTG 2 cut(s) 358, 1023
SaqAI TTAA 6 cut(s) 807, 1038, 1116, 1128, 1176, 1507
SatI GCNGC 2 cut(s) 1215, 1499
Sau3AI GATC 4 cut(s) 25, 376, 648, 760
Sau96I GGNCC 7 cut(s) 268, 321, 535, 658, 812, 1195, 1243
SchI GAGTC 2 cut(s) 754, 1359
ScrFI CCNGG 4 cut(s) 137, 830, 876, 1199
SduI GDGCHC 2 cut(s) 299, 777
SfaNI GCATC 5 cut(s) 394, 916, 1044, 1110, 1374
SfcI CTRYAG 2 cut(s) 552, 1215
SinI GGWCC 6 cut(s) 268, 321, 535, 658, 1195, 1243
SmiMI CAYNNNNRTG 2 cut(s) 358, 1023
SmlI CTYRAG 2 cut(s) 272, 305
SmoI CTYRAG 2 cut(s) 272, 305
Sse9I AATT 9 cut(s) 183, 391, 571, 588, 1000, 1090, 1204, 1285, 1315
SsiI CCGC 1 cut(s) 777
SspI AATATT 1 cut(s) 1036
SspMI CTAG 4 cut(s) 60, 930, 1328, 1502
StyD4I CCNGG 4 cut(s) 135, 828, 874, 1197
StyI CCWWGG 2 cut(s) 723, 1024
TaaI ACNGT 2 cut(s) 23, 203
TaiI ACGT 2 cut(s) 224, 261
TaqI TCGA 4 cut(s) 52, 213, 241, 1487
TasI AATT 9 cut(s) 183, 391, 571, 588, 1000, 1090, 1204, 1285, 1315
TfiI GAWTC 4 cut(s) 364, 785, 823, 1395
Tru1I TTAA 6 cut(s) 807, 1038, 1116, 1128, 1176, 1507
Tru9I TTAA 6 cut(s) 807, 1038, 1116, 1128, 1176, 1507
TscAI CASTG 3 cut(s) 206, 238, 1315
TseFI GTSAC 1 cut(s) 244
TseI GCWGC 2 cut(s) 1214, 1498
Tsp45I GTSAC 1 cut(s) 244
TspDTI ATGAA 4 cut(s) 354, 446, 777, 1485
TspGWI ACGGA 1 cut(s) 199
TspRI CASTG 3 cut(s) 206, 238, 1315
Van91I CCANNNNNTGG 1 cut(s) 835
VpaK11BI GGWCC 6 cut(s) 268, 321, 535, 658, 1195, 1243
VspI ATTAAT 1 cut(s) 1038
XapI RAATTY 3 cut(s) 571, 1090, 1315
XceI RCATGY 2 cut(s) 1111, 1465
XmiI GTMKAC 1 cut(s) 1071
XmnI GAANNNNTTC 1 cut(s) 395
XspI CTAG 4 cut(s) 60, 930, 1328, 1502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.