Prupe.1G124900_v2.0.a1

Protein NRT1 PTR FAMILY

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000950
Physical Location & Seq
Reverse (-)
9856265 .. 9858773
2509 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G124900.1

Sequence Viewer

Length: 1587 bp
ATGGGTTTGGGAGCACTCATTCACTTTGTGAGAGAGTGCATCCATAAGTACCTCTACTTTTCCAAGGCTACAATATGCATCCAGGGGTTGGTTTTGAGCCATAGCTTCGTCAACCATGCGATAATGTCTATCTTGATAGTGTACCTCCAAAACAATTGGTCTCATCCACATTTTCAAATAGCTGCCGTAGTTACCAATGTGCAAGAAGGGATAGCAGACATATTGGTGATTTTCCTAGCTCATTTCTCACACACATTCAATGGTGGTCTCAAAATAATTGCCACCACAAATGCTGCCTATATTCTTGGGCTATCTCTGTTATGGCTTCCTAATGAATATAAAAGCGAGGACTACGCAGCAATGGCCAGGATATTCTATGGAGCAGTGGTACTATTAACATTAGGTGAATCTGGGCGATCCGCTGCTTTGAAAGAATTTCTTAACAAGCAATGTTTAAGCCAACATAAAGAAACAGGACGCACTGATGGCAAACGACCGGAAGGATGGGAAGAAGCTAGCGAACAGAAAGAAATAACAGCAGAAAAGTATACAGAAGCTGGTGGTGATCAACAGGTGACGAAAGAAATGGCAGAAAGGGATAAAAAGGACTTCTGGGGTGTTCCATGGTTTTTAGGTGCAGTGGTACCTCTTTTCCTTTTAAAAACAACTTGGACTCAGATCTTCATGATTTCAACAATTGCAATGGCAGTTTCTTATTTATTGTTCTGGTTTGGCTACAACGATTATTTGAAAAACAATAAAGAAGCACAAGCAGGGGAGCATCACCAAGTCACAGAAAGAGAGAACCTTTGGACATTGAACAAAAAGGTGAGGAAGAAAAAACGTTTGCGCAAAGAAATTGTAGCTTCATGGTTAGCCTTCTTTGTATACAGTATGGTAAAGGCAGCAGGGAGCACCTTCTTTTTCGAACAAATGAGTAACTTGAAAAATCCCATCCACAATTATGACCCTGCAGTTTATTTCAATGTGCTTAGCTCCTTTTCGAAGTACATAATCTCATTTCTCTTCCCCAAACTAATTCCAAAGCGAACGCGGGCTAGAATTGGCTGTGGAATGGCTTCTACTGTGTTATGTTGCGTTGCTGCTTGGGTGGTTGAGATCCAGAGGATGAGGAAAGTTACGAGGGCAGGGCTTGAAGATGACACTTCAGAAACTATTTCTATGAGCATGTTTTGGTTGGTTCCACAGTTCTTCCTGTTAGGACTTATGGAAGGGTTAGCCGTAGATGGATTGATTGATCTTTTGGCTGATAGAGTGGACGAGAAGGATAAAGAAATGGCTAAGCATTATGGATCCCACACCAGCGACTTAGTCGTGGGGACTGGAAAGTTATTAACCGCTCTTATTATCTTGGCATTTAGGCATAGATGGTTCAATGACAGCATAAATCTGAGTCGTCTTGACAAGTATTACAGACTGCTAACGTTTCTAAGTCTCGGTAGCTTCATCTACTACTTGTGTGTTGGCTTTTATTTTTATAGCAATGATGACGCACAAAATTCTGCCATTGAAGAACATGAACAAGGCCATAATGGAAGTGGAAATATGGAAATGGCGACTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

529

Amino Acids

60.12

Weight (kDa)

8.02

Isoelectric Point (pI)

32.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 851
Acc65I GGTACC 1 cut(s) 643
AccB1I GGYRCC 1 cut(s) 643
AccB7I CCANNNNNTGG 1 cut(s) 88
AccBSI CCGCTC 1 cut(s) 1361
AccI GTMKAC 2 cut(s) 548, 888
AccII CGCG 1 cut(s) 1054
AciI CCGC 3 cut(s) 420, 1054, 1359
AclI AACGTT 2 cut(s) 844, 1445
AclWI GGATC 4 cut(s) 411, 1114, 1308, 1321
AcoI YGGCCR 1 cut(s) 363
AcsI RAATTY 2 cut(s) 434, 1519
AcuI CTGAAG 1 cut(s) 1152
AdeI CACNNNGTG 1 cut(s) 28
AfaI GTAC 5 cut(s) 50, 143, 390, 645, 1010
AfiI CCNNNNNNNGG 1 cut(s) 88
AjnI CCWGG 2 cut(s) 81, 365
AluBI AGCT 8 cut(s) 105, 182, 239, 515, 557, 866, 996, 1464
AluI AGCT 8 cut(s) 105, 182, 239, 515, 557, 866, 996, 1464
Alw21I GWGCWC 2 cut(s) 16, 917
Alw26I GTCTC 3 cut(s) 165, 272, 1460
AlwI GGATC 4 cut(s) 411, 1114, 1308, 1321
AlwNI CAGNNNCTG 1 cut(s) 557
AoxI GGCC 2 cut(s) 363, 1546
ApeKI GCWGC 6 cut(s) 182, 293, 356, 422, 905, 1103
ApoI RAATTY 2 cut(s) 434, 1519
Asp700I GAANNNNTTC 1 cut(s) 1078
Asp718I GGTACC 1 cut(s) 643
AspLEI GCGC 1 cut(s) 852
AsuHPI GGTGA 6 cut(s) 238, 416, 575, 586, 776, 841
AsuII TTCGAA 2 cut(s) 927, 1004
AsuNHI GCTAGC 1 cut(s) 515
BalI TGGCCA 1 cut(s) 365
BamHI GGATCC 1 cut(s) 1313
BanI GGYRCC 1 cut(s) 643
Bbv12I GWGCWC 2 cut(s) 16, 917
BbvI GCAGC 6 cut(s) 169, 280, 368, 409, 917, 1090
BccI CCATC 5 cut(s) 479, 498, 962, 1241, 1383
BceAI ACGGC 2 cut(s) 170, 1226
BciT130I CCWGG 2 cut(s) 83, 367
BclI TGATCA 1 cut(s) 565
BcoDI GTCTC 3 cut(s) 165, 272, 1460
BfaI CTAG 3 cut(s) 236, 516, 1059
BfmI CTRYAG 1 cut(s) 972
BglII AGATCT 1 cut(s) 678
BisI GCNGC 6 cut(s) 183, 294, 357, 423, 906, 1104
BlpI GCTNAGC 2 cut(s) 992, 1302
BlsI GCNGC 6 cut(s) 184, 295, 358, 424, 907, 1105
Bme1390I CCNGG 2 cut(s) 83, 367
BmiI GGNNCC 3 cut(s) 645, 1203, 1315
BmrFI CCNGG 2 cut(s) 83, 367
BmsI GCATC 3 cut(s) 48, 87, 790
BmtI GCTAGC 1 cut(s) 519
Bpu1102I GCTNAGC 2 cut(s) 992, 1302
Bpu14I TTCGAA 2 cut(s) 927, 1004
BsaI GGTCTC 2 cut(s) 165, 272
BsaJI CCNNGG 3 cut(s) 63, 82, 623
BsaWI WCCGGW 1 cut(s) 496
BsaXI ACNNNNNCTCC 2 cut(s) 372, 402
Bsc4I CCNNNNNNNGG 1 cut(s) 88
Bse1I ACTGG 1 cut(s) 1348
Bse3DI GCAATG 4 cut(s) 366, 455, 708, 1510
BseBI CCWGG 2 cut(s) 83, 367
BseDI CCNNGG 3 cut(s) 63, 82, 623
BseGI GGATG 6 cut(s) 39, 78, 163, 509, 954, 1134
BseLI CCNNNNNNNGG 1 cut(s) 88
BseMI GCAATG 4 cut(s) 366, 455, 708, 1510
BseMII CTCAG 2 cut(s) 689, 1403
BseNI ACTGG 1 cut(s) 1348
BseXI GCAGC 6 cut(s) 169, 280, 368, 409, 917, 1090
BsgI GTGCAG 1 cut(s) 657
Bsh1236I CGCG 1 cut(s) 1054
Bsh1285I CGRYCG 1 cut(s) 497
BshFI GGCC 2 cut(s) 365, 1548
BshNI GGYRCC 1 cut(s) 643
BsiEI CGRYCG 1 cut(s) 497
BsiHKAI GWGCWC 2 cut(s) 16, 917
BsiSI CCGG 1 cut(s) 497
BslFI GGGAC 1 cut(s) 1354
BslI CCNNNNNNNGG 1 cut(s) 88
BsmAI GTCTC 3 cut(s) 165, 272, 1460
BsmFI GGGAC 1 cut(s) 1354
BsnI GGCC 2 cut(s) 365, 1548
Bso31I GGTCTC 2 cut(s) 165, 272
Bsp119I TTCGAA 2 cut(s) 927, 1004
Bsp1286I GDGCHC 2 cut(s) 16, 917
Bsp143I GATC 6 cut(s) 416, 565, 678, 1119, 1258, 1313
Bsp1720I GCTNAGC 2 cut(s) 992, 1302
Bsp19I CCATGG 1 cut(s) 623
BspACI CCGC 3 cut(s) 420, 1054, 1359
BspANI GGCC 2 cut(s) 365, 1548
BspCNI CTCAG 2 cut(s) 688, 1404
BspFNI CGCG 1 cut(s) 1054
BspHI TCATGA 1 cut(s) 684
BspLI GGNNCC 3 cut(s) 645, 1203, 1315
BspMAI CTGCAG 1 cut(s) 976
BspOI GCTAGC 1 cut(s) 519
BspPI GGATC 4 cut(s) 411, 1114, 1308, 1321
BspT104I TTCGAA 2 cut(s) 927, 1004
BspT107I GGYRCC 1 cut(s) 643
BspTNI GGTCTC 2 cut(s) 165, 272
BsrBI CCGCTC 1 cut(s) 1361
BsrDI GCAATG 4 cut(s) 366, 455, 708, 1510
BsrI ACTGG 1 cut(s) 1348
BssECI CCNNGG 3 cut(s) 63, 82, 623
BssMI GATC 6 cut(s) 416, 565, 678, 1119, 1258, 1313
BssNAI GTATAC 2 cut(s) 549, 889
BssT1I CCWWGG 2 cut(s) 63, 623
Bst1107I GTATAC 2 cut(s) 549, 889
Bst2UI CCWGG 2 cut(s) 83, 367
Bst4CI ACNGT 3 cut(s) 893, 1087, 1209
Bst6I CTCTTC 1 cut(s) 1031
BstBI TTCGAA 2 cut(s) 927, 1004
BstC8I GCNNGC 2 cut(s) 517, 1056
BstDEI CTNAG 6 cut(s) 675, 992, 1302, 1330, 1412, 1451
BstDSI CCRYGG 1 cut(s) 623
BstF5I GGATG 6 cut(s) 39, 78, 163, 509, 954, 1134
BstFNI CGCG 1 cut(s) 1054
BstHHI GCGC 1 cut(s) 852
BstKTI GATC 6 cut(s) 419, 568, 681, 1122, 1261, 1316
BstMAI GTCTC 3 cut(s) 165, 272, 1460
BstMBI GATC 6 cut(s) 416, 565, 678, 1119, 1258, 1313
BstMCI CGRYCG 1 cut(s) 497
BstMWI GCNNNNNNNGC 2 cut(s) 362, 486
BstNI CCWGG 2 cut(s) 83, 367
BstNSI RCATGY 1 cut(s) 1192
BstSCI CCNGG 2 cut(s) 81, 365
BstSFI CTRYAG 1 cut(s) 972
BstUI CGCG 1 cut(s) 1054
BstV1I GCAGC 6 cut(s) 169, 280, 368, 409, 917, 1090
BstX2I RGATCY 3 cut(s) 678, 1119, 1313
BstYI RGATCY 3 cut(s) 678, 1119, 1313
BstZ17I GTATAC 2 cut(s) 549, 889
BsuRI GGCC 2 cut(s) 365, 1548
BtgI CCRYGG 1 cut(s) 623
BtsCI GGATG 6 cut(s) 39, 78, 163, 509, 954, 1134
BtsI GCAGTG 2 cut(s) 390, 645
BtsIMutI CAGTG 3 cut(s) 390, 480, 645
Cac8I GCNNGC 2 cut(s) 517, 1056
CaiI CAGNNNCTG 1 cut(s) 557
CciI TCATGA 1 cut(s) 684
CfoI GCGC 1 cut(s) 852
CseI GACGC 2 cut(s) 486, 1520
Csp6I GTAC 5 cut(s) 49, 142, 389, 644, 1009
CviAII CATG 6 cut(s) 116, 624, 685, 870, 1189, 1538
CviQI GTAC 5 cut(s) 49, 142, 389, 644, 1009
DdeI CTNAG 6 cut(s) 675, 992, 1302, 1330, 1412, 1451
DpnI GATC 6 cut(s) 418, 567, 680, 1121, 1260, 1315
DpnII GATC 6 cut(s) 416, 565, 678, 1119, 1258, 1313
DraI TTTAAA 1 cut(s) 660
DraIII CACNNNGTG 1 cut(s) 28
EaeI YGGCCR 1 cut(s) 363
Eam1104I CTCTTC 1 cut(s) 1031
EarI CTCTTC 1 cut(s) 1031
Eco130I CCWWGG 2 cut(s) 63, 623
Eco31I GGTCTC 2 cut(s) 165, 272
Eco57I CTGAAG 1 cut(s) 1152
EcoRII CCWGG 2 cut(s) 81, 365
EcoT14I CCWWGG 2 cut(s) 63, 623
EcoT22I ATGCAT 1 cut(s) 80
ErhI CCWWGG 2 cut(s) 63, 623
FaeI CATG 6 cut(s) 119, 627, 688, 873, 1192, 1541
FalI AAGNNNNNCTT 2 cut(s) 423, 455
FaqI GGGAC 1 cut(s) 1354
FatI CATG 6 cut(s) 115, 623, 684, 869, 1188, 1537
FauI CCCGC 1 cut(s) 1047
FbaI TGATCA 1 cut(s) 565
FblI GTMKAC 2 cut(s) 548, 888
Fnu4HI GCNGC 6 cut(s) 183, 294, 357, 423, 906, 1104
FokI GGATG 6 cut(s) 26, 65, 150, 516, 941, 1141
Fsp4HI GCNGC 6 cut(s) 183, 294, 357, 423, 906, 1104
FspBI CTAG 3 cut(s) 236, 516, 1059
FspI TGCGCA 1 cut(s) 851
GlaI GCGC 1 cut(s) 851
GluI GCNGC 6 cut(s) 183, 294, 357, 423, 906, 1104
HaeIII GGCC 2 cut(s) 365, 1548
HapII CCGG 1 cut(s) 497
HgaI GACGC 2 cut(s) 486, 1520
HhaI GCGC 1 cut(s) 852
Hin1II CATG 6 cut(s) 119, 627, 688, 873, 1192, 1541
Hin6I GCGC 1 cut(s) 850
HinP1I GCGC 1 cut(s) 850
HincII GTYRAC 1 cut(s) 112
HindII GTYRAC 1 cut(s) 112
HinfI GANTC 3 cut(s) 407, 673, 1414
HpaII CCGG 1 cut(s) 497
HphI GGTGA 6 cut(s) 238, 416, 575, 586, 776, 841
Hpy166II GTNNAC 5 cut(s) 112, 142, 549, 889, 1279
Hpy188I TCNGA 3 cut(s) 678, 1171, 1413
Hpy188III TCNNGA 4 cut(s) 133, 685, 1123, 1421
Hpy8I GTNNAC 5 cut(s) 112, 142, 549, 889, 1279
HpyAV CCTTC 6 cut(s) 200, 494, 889, 928, 1226, 1279
HpyCH4III ACNGT 3 cut(s) 893, 1087, 1209
HpyCH4IV ACGT 2 cut(s) 844, 1445
HpyCH4V TGCA 6 cut(s) 39, 78, 202, 638, 701, 974
HpyF10VI GCNNNNNNNGC 2 cut(s) 362, 486
HpyF3I CTNAG 6 cut(s) 675, 992, 1302, 1330, 1412, 1451
HpySE526I ACGT 2 cut(s) 844, 1445
Hsp92II CATG 6 cut(s) 119, 627, 688, 873, 1192, 1541
HspAI GCGC 1 cut(s) 850
KpnI GGTACC 1 cut(s) 647
Ksp22I TGATCA 1 cut(s) 565
Kzo9I GATC 6 cut(s) 416, 565, 678, 1119, 1258, 1313
LmnI GCTCC 5 cut(s) 11, 380, 778, 912, 1001
Lsp1109I GCAGC 6 cut(s) 169, 280, 368, 409, 917, 1090
LweI GCATC 3 cut(s) 48, 87, 790
MaeI CTAG 3 cut(s) 236, 516, 1059
MaeII ACGT 2 cut(s) 844, 1445
MaeIII GTNAC 5 cut(s) 190, 574, 790, 938, 1138
MalI GATC 6 cut(s) 418, 567, 680, 1121, 1260, 1315
MbiI CCGCTC 1 cut(s) 1361
MboI GATC 6 cut(s) 416, 565, 678, 1119, 1258, 1313
MboII GAAGA 7 cut(s) 521, 673, 847, 1018, 1169, 1204, 1544
MfeI CAATTG 2 cut(s) 154, 696
MflI RGATCY 3 cut(s) 678, 1119, 1313
MhlI GDGCHC 2 cut(s) 16, 917
MlsI TGGCCA 1 cut(s) 365
MluCI AATT 9 cut(s) 154, 276, 434, 696, 858, 961, 1038, 1062, 1519
MluNI TGGCCA 1 cut(s) 365
MlyI GAGTC 2 cut(s) 667, 1423
MnlI CCTC 8 cut(s) 62, 155, 340, 657, 825, 1119, 1125, 1137
Mox20I TGGCCA 1 cut(s) 365
Mph1103I ATGCAT 1 cut(s) 80
MroXI GAANNNNTTC 1 cut(s) 1078
MscI TGGCCA 1 cut(s) 365
MseI TTAA 5 cut(s) 395, 441, 455, 659, 1355
MslI CAYNNNNRTG 2 cut(s) 224, 963
Msp20I TGGCCA 1 cut(s) 365
MspA1I CMGCKG 1 cut(s) 422
MspI CCGG 1 cut(s) 497
MspR9I CCNGG 2 cut(s) 83, 367
MunI CAATTG 2 cut(s) 154, 696
MvaI CCWGG 2 cut(s) 83, 367
MvnI CGCG 1 cut(s) 1054
MwoI GCNNNNNNNGC 2 cut(s) 362, 486
NcoI CCATGG 1 cut(s) 623
NdeII GATC 6 cut(s) 416, 565, 678, 1119, 1258, 1313
NheI GCTAGC 1 cut(s) 515
NlaIII CATG 6 cut(s) 119, 627, 688, 873, 1192, 1541
NlaIV GGNNCC 3 cut(s) 645, 1203, 1315
NmuCI GTSAC 2 cut(s) 574, 790
NsbI TGCGCA 1 cut(s) 851
NsiI ATGCAT 1 cut(s) 80
NspI RCATGY 1 cut(s) 1192
NspV TTCGAA 2 cut(s) 927, 1004
PagI TCATGA 1 cut(s) 684
PdmI GAANNNNTTC 1 cut(s) 1078
PfeI GAWTC 1 cut(s) 407
PflFI GACNNNGTC 1 cut(s) 1331
PflMI CCANNNNNTGG 1 cut(s) 88
PkrI GCNGC 6 cut(s) 184, 295, 358, 424, 907, 1105
PleI GAGTC 2 cut(s) 667, 1422
PpsI GAGTC 2 cut(s) 667, 1422
Psp1406I AACGTT 2 cut(s) 844, 1445
Psp6I CCWGG 2 cut(s) 81, 365
PspGI CCWGG 2 cut(s) 81, 365
PspN4I GGNNCC 3 cut(s) 645, 1203, 1315
PstI CTGCAG 1 cut(s) 976
PstNI CAGNNNCTG 1 cut(s) 557
PsuI RGATCY 3 cut(s) 678, 1119, 1313
PsyI GACNNNGTC 1 cut(s) 1331
RsaI GTAC 5 cut(s) 50, 143, 390, 645, 1010
RsaNI GTAC 5 cut(s) 49, 142, 389, 644, 1009
RseI CAYNNNNRTG 2 cut(s) 224, 963
SaqAI TTAA 5 cut(s) 395, 441, 455, 659, 1355
SatI GCNGC 6 cut(s) 183, 294, 357, 423, 906, 1104
Sau3AI GATC 6 cut(s) 416, 565, 678, 1119, 1258, 1313
SchI GAGTC 2 cut(s) 667, 1423
ScrFI CCNGG 2 cut(s) 83, 367
SduI GDGCHC 2 cut(s) 16, 917
SfaNI GCATC 3 cut(s) 48, 87, 790
SfcI CTRYAG 1 cut(s) 972
SfuI TTCGAA 2 cut(s) 927, 1004
SmiMI CAYNNNNRTG 2 cut(s) 224, 963
Sse9I AATT 9 cut(s) 154, 276, 434, 696, 858, 961, 1038, 1062, 1519
SsiI CCGC 3 cut(s) 420, 1054, 1359
SspMI CTAG 3 cut(s) 236, 516, 1059
StyD4I CCNGG 2 cut(s) 81, 365
StyI CCWWGG 2 cut(s) 63, 623
TaaI ACNGT 3 cut(s) 893, 1087, 1209
TaiI ACGT 2 cut(s) 847, 1448
TaqI TCGA 2 cut(s) 927, 1004
TasI AATT 9 cut(s) 154, 276, 434, 696, 858, 961, 1038, 1062, 1519
TatI WGTACW 1 cut(s) 1008
TfiI GAWTC 1 cut(s) 407
Tru1I TTAA 5 cut(s) 395, 441, 455, 659, 1355
Tru9I TTAA 5 cut(s) 395, 441, 455, 659, 1355
TscAI CASTG 3 cut(s) 390, 487, 645
TseFI GTSAC 2 cut(s) 574, 790
TseI GCWGC 6 cut(s) 182, 293, 356, 422, 905, 1103
Tsp45I GTSAC 2 cut(s) 574, 790
TspDTI ATGAA 5 cut(s) 348, 673, 858, 1456, 1554
TspRI CASTG 3 cut(s) 390, 487, 645
Tth111I GACNNNGTC 1 cut(s) 1331
Van91I CCANNNNNTGG 1 cut(s) 88
XapI RAATTY 2 cut(s) 434, 1519
XceI RCATGY 1 cut(s) 1192
XcmI CCANNNNNNNNNTGG 1 cut(s) 1556
XmiI GTMKAC 2 cut(s) 548, 888
XmnI GAANNNNTTC 1 cut(s) 1078
XspI CTAG 3 cut(s) 236, 516, 1059
Zsp2I ATGCAT 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.