Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0000632

Physical Location & Seq

Genomic Coordinates Forward (+)

16741746 .. 16742943

Gene Structure 1198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G161200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 609 bp

ATGGCGAGCTATGAGAAGCAGTACGGGGCAACACCGACCGACGAGTACGGGAACCCGATCCGCCGCACCGACGAGTACGGGAACCCACTTGGTCATCACACTACTACGACCGGAACCACCGCGGCCACCACTGGCGCAGGAGGGTACGACCCTCATGACTTCGCCGCCACCACGGTAGCTGGCCAAGGCCAAGGGGTGCATGGTCACGACTATGACAGGAAAGGGCACCACGGCGTCACTGGCGCCGTGCTTCACCGCTCTGGTAGCTCAAGCTCTAGCTCTTCTGAGGATGACGGGCTAGGAGGGAGGAGGAAGAAGAAGGGGTTGAAGGAGAAGGTAAAGGAGAAGCTGCCAGGTGGAACCAAAACCGATACAACATACGGTGGAACTGGGACCACCGGGCAGCACCACCAGGAGAAGGGGACGATGGACAAGATCAAGGAGAAGCTGCCTGGGACTGGGGGGCATAGGGCAGATGACCCCTACCCATCTCAGACTCATACAACTGCCACCACCACACCTTATGGTGGAACCGCCTACACCGAAGAGCACCAAGAGAAGAAGGGGATCATGGACAAGATCAAGGAGAAACTTCCCGGACAACACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001786 GO:0003674 GO:0005488 GO:0005507 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0008150 GO:0008289 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009631 GO:0009719 GO:0009725 GO:0009737 GO:0009961 GO:0010033 GO:0010035 GO:0010243 GO:0012506 GO:0016020 GO:0016151 GO:0031090 GO:0031982 GO:0033993 GO:0035091 GO:0042221 GO:0043167 GO:0043168 GO:0043169 GO:0043200 GO:0043226 GO:0043227 GO:0044422 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896 GO:0070300 GO:0072341 GO:0097305 GO:1901611 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dehydrin

Protein Analysis

203

Amino Acids

21.45

Weight (kDa)

7.95

Isoelectric Point (pI)

20.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000632)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g12550 FvH4_1g12560 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582 FvH4_1g12582
malus_domestica	MD02G1139700.v1.1 MD02G1139800.v1.1 MD02G1139900.v1.1 MD02G1140000.v1.1 MD02G1140100.v1.1 MD15G1253900.v1.1
prunus_persica	Prupe.7G161000_v2.0.a1 Prupe.7G161100_v2.0.a1 Prupe.7G161200_v2.0.a1
pyrus_communis	pycom02g11040 pycom02g11050 pycom02g11060 pycom15g22290
rosa_chinensis	RchiOBHm_Chr2g0100511 RchiOBHm_Chr2g0100521 RchiOBHm_Chr2g0100551
rosa_laevigata	RLG00000016977 RLG00000016979 RLG00000016980 RLG00000016984
rosa_multiflora	Rmu_co8033534.1_g000001 Rmu_co8351081.1_g000001 Rmu_sc0000528.1_g000012 Rmu_sc0000528.1_g000015 Rmu_sc0000528.1_g000020 Rmu_sc0000528.1_g000022 Rmu_sc0005122.1_g000019 Rmu_sc0006445.1_g000015 Rmu_sc0022708.1_g000001 Rmu_sc0022708.1_g000004 Rmu_sc0023932.1_g000001 Rmu_sc0026349.1_g000001
rosa_roxburghii	Rroxscaffold_2G00142150 Rroxscaffold_2G00142160 Rroxscaffold_2G00142180
rosa_rugosa	Rorug02G0088800 Rorug02G0088900 Rorug02G0089000 Rorug02G0089200 Rorug02G0089400
rosa_samantha	Rh1BG215800 Rh1DG241900 Rh2AG138400 Rh2AG138500 Rh2BG141400 Rh2BG141600 Rh2BG141700 Rh2BG141900 Rh2CG143600 Rh2CG143800 Rh2CG144000 Rh2CG144200 Rh2DG143200 Rh2DG143300 Rh2DG143400 Rh2DG143600
rosa_wichuraiana	Rw2G010820 Rw2G010830 Rw2G010840 Rw2G010850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	225, 242
AccBSI	CCGCTC	1 cut(s)	258
AccII	CGCG	1 cut(s)	122
AciI	CCGC	7 cut(s)	61, 64, 120, 122, 165, 256, 534
AclWI	GGATC	2 cut(s)	52, 575
AcoI	YGGCCR	2 cut(s)	123, 181
AcyI	GRCGYC	2 cut(s)	234, 243
AfaI	GTAC	4 cut(s)	23, 47, 77, 146
AfiI	CCNNNNNNNGG	3 cut(s)	418, 458, 527
AgsI	TTSAA	1 cut(s)	328
AjnI	CCWGG	3 cut(s)	352, 411, 451
AluBI	AGCT	7 cut(s)	9, 179, 267, 273, 279, 349, 448
AluI	AGCT	7 cut(s)	9, 179, 267, 273, 279, 349, 448
Alw21I	GWGCWC	1 cut(s)	552
AlwI	GGATC	2 cut(s)	52, 575
AoxI	GGCC	3 cut(s)	123, 181, 187
ApeKI	GCWGC	3 cut(s)	349, 403, 448
AspLEI	GCGC	2 cut(s)	137, 245
AspS9I	GGNCC	1 cut(s)	393
AsuC2I	CCSGG	2 cut(s)	400, 597
AsuHPI	GGTGA	1 cut(s)	245
AvaII	GGWCC	1 cut(s)	393
BaeGI	GKGCMC	1 cut(s)	228
BalI	TGGCCA	1 cut(s)	183
BanI	GGYRCC	2 cut(s)	225, 242
Bbv12I	GWGCWC	1 cut(s)	552
BbvI	GCAGC	3 cut(s)	336, 415, 435
BccI	CCATC	2 cut(s)	421, 496
BceAI	ACGGC	2 cut(s)	230, 247
BciT130I	CCWGG	3 cut(s)	354, 413, 453
BcnI	CCSGG	2 cut(s)	400, 597
BfaI	CTAG	3 cut(s)	276, 299, 607
BfoI	RGCGCY	1 cut(s)	246
BisI	GCNGC	6 cut(s)	64, 123, 165, 350, 404, 449
BlsI	GCNGC	6 cut(s)	65, 124, 166, 351, 405, 450
Bme1390I	CCNGG	5 cut(s)	354, 400, 413, 453, 597
Bme18I	GGWCC	1 cut(s)	393
BmgT120I	GGNCC	1 cut(s)	393
BmiI	GGNNCC	8 cut(s)	53, 83, 115, 227, 244, 361, 394, 532
BmrFI	CCNGG	5 cut(s)	354, 400, 413, 453, 597
BmrI	ACTGGG	2 cut(s)	399, 468
BmuI	ACTGGG	2 cut(s)	399, 468
BpuEI	CTTGAG	1 cut(s)	253
BpuMI	CCSGG	2 cut(s)	400, 597
BsaHI	GRCGYC	2 cut(s)	234, 243
BsaJI	CCNNGG	6 cut(s)	120, 171, 184, 190, 229, 452
BsaWI	WCCGGW	1 cut(s)	110
Bsc4I	CCNNNNNNNGG	3 cut(s)	418, 458, 527
Bse1I	ACTGG	4 cut(s)	136, 244, 394, 463
BseBI	CCWGG	3 cut(s)	354, 413, 453
BseDI	CCNNGG	6 cut(s)	120, 171, 184, 190, 229, 452
BseGI	GGATG	1 cut(s)	295
BseLI	CCNNNNNNNGG	3 cut(s)	418, 458, 527
BseMII	CTCAG	2 cut(s)	276, 506
BseNI	ACTGG	4 cut(s)	136, 244, 394, 463
BseRI	GAGGAG	1 cut(s)	322
BseSI	GKGCMC	1 cut(s)	228
BseXI	GCAGC	3 cut(s)	336, 415, 435
Bsh1236I	CGCG	1 cut(s)	122
Bsh1285I	CGRYCG	2 cut(s)	39, 111
BshFI	GGCC	3 cut(s)	125, 183, 189
BshNI	GGYRCC	2 cut(s)	225, 242
BsiEI	CGRYCG	2 cut(s)	39, 111
BsiHKAI	GWGCWC	1 cut(s)	552
BsiSI	CCGG	3 cut(s)	111, 399, 597
BslFI	GGGAC	3 cut(s)	406, 436, 469
BslI	CCNNNNNNNGG	3 cut(s)	418, 458, 527
BsmFI	GGGAC	3 cut(s)	406, 436, 469
BsnI	GGCC	3 cut(s)	125, 183, 189
Bsp1286I	GDGCHC	2 cut(s)	228, 552
Bsp143I	GATC	4 cut(s)	57, 435, 567, 579
BspACI	CCGC	7 cut(s)	61, 64, 120, 122, 165, 256, 534
BspANI	GGCC	3 cut(s)	125, 183, 189
BspCNI	CTCAG	2 cut(s)	277, 505
BspFNI	CGCG	1 cut(s)	122
BspHI	TCATGA	1 cut(s)	154
BspLI	GGNNCC	8 cut(s)	53, 83, 115, 227, 244, 361, 394, 532
BspPI	GGATC	2 cut(s)	52, 575
BspQI	GCTCTTC	2 cut(s)	286, 540
BspT107I	GGYRCC	2 cut(s)	225, 242
BsrBI	CCGCTC	1 cut(s)	258
BsrI	ACTGG	4 cut(s)	136, 244, 394, 463
BssECI	CCNNGG	6 cut(s)	120, 171, 184, 190, 229, 452
BssMI	GATC	4 cut(s)	57, 435, 567, 579
BssNI	GRCGYC	2 cut(s)	234, 243
BssT1I	CCWWGG	2 cut(s)	184, 190
Bst2UI	CCWGG	3 cut(s)	354, 413, 453
Bst4CI	ACNGT	2 cut(s)	175, 383
Bst6I	CTCTTC	2 cut(s)	286, 540
BstACI	GRCGYC	2 cut(s)	234, 243
BstC8I	GCNNGC	2 cut(s)	7, 181
BstDEI	CTNAG	2 cut(s)	285, 492
BstDSI	CCRYGG	3 cut(s)	120, 171, 229
BstF5I	GGATG	1 cut(s)	295
BstFNI	CGCG	1 cut(s)	122
BstH2I	RGCGCY	1 cut(s)	246
BstHHI	GCGC	2 cut(s)	137, 245
BstKTI	GATC	4 cut(s)	60, 438, 570, 582
BstMBI	GATC	4 cut(s)	57, 435, 567, 579
BstMCI	CGRYCG	2 cut(s)	39, 111
BstMWI	GCNNNNNNNGC	2 cut(s)	240, 264
BstNI	CCWGG	3 cut(s)	354, 413, 453
BstSCI	CCNGG	5 cut(s)	352, 398, 411, 451, 595
BstSLI	GKGCMC	1 cut(s)	228
BstUI	CGCG	1 cut(s)	122
BstV1I	GCAGC	3 cut(s)	336, 415, 435
BsuRI	GGCC	3 cut(s)	125, 183, 189
BtgI	CCRYGG	3 cut(s)	120, 171, 229
BtsCI	GGATG	1 cut(s)	295
BtsIMutI	CAGTG	2 cut(s)	129, 237
Cac8I	GCNNGC	2 cut(s)	7, 181
CciI	TCATGA	1 cut(s)	154
CfoI	GCGC	2 cut(s)	137, 245
Cfr13I	GGNCC	1 cut(s)	393
Cfr42I	CCGCGG	1 cut(s)	123
CseI	GACGC	1 cut(s)	223
Csp6I	GTAC	4 cut(s)	22, 46, 76, 145
CviAII	CATG	3 cut(s)	155, 200, 571
CviQI	GTAC	4 cut(s)	22, 46, 76, 145
DdeI	CTNAG	2 cut(s)	285, 492
DinI	GGCGCC	1 cut(s)	244
DpnI	GATC	4 cut(s)	59, 437, 569, 581
DpnII	GATC	4 cut(s)	57, 435, 567, 579
EaeI	YGGCCR	2 cut(s)	123, 181
Eam1104I	CTCTTC	2 cut(s)	286, 540
EarI	CTCTTC	2 cut(s)	286, 540
EciI	GGCGGA	1 cut(s)	50
Eco130I	CCWWGG	2 cut(s)	184, 190
Eco47I	GGWCC	1 cut(s)	393
EcoRII	CCWGG	3 cut(s)	352, 411, 451
EcoT14I	CCWWGG	2 cut(s)	184, 190
EgeI	GGCGCC	1 cut(s)	244
EheI	GGCGCC	1 cut(s)	244
ErhI	CCWWGG	2 cut(s)	184, 190
FaeI	CATG	3 cut(s)	158, 203, 574
FaiI	YATR	9 cut(s)	12, 156, 201, 213, 379, 468, 501, 525, 572
FaqI	GGGAC	3 cut(s)	406, 436, 469
FatI	CATG	3 cut(s)	154, 199, 570
Fnu4HI	GCNGC	6 cut(s)	64, 123, 165, 350, 404, 449
FokI	GGATG	1 cut(s)	302
Fsp4HI	GCNGC	6 cut(s)	64, 123, 165, 350, 404, 449
FspBI	CTAG	3 cut(s)	276, 299, 607
GlaI	GCGC	2 cut(s)	136, 244
GluI	GCNGC	6 cut(s)	64, 123, 165, 350, 404, 449
HaeII	RGCGCY	1 cut(s)	246
HaeIII	GGCC	3 cut(s)	125, 183, 189
HapII	CCGG	3 cut(s)	111, 399, 597
HgaI	GACGC	1 cut(s)	223
HhaI	GCGC	2 cut(s)	137, 245
Hin1I	GRCGYC	2 cut(s)	234, 243
Hin1II	CATG	3 cut(s)	158, 203, 574
Hin6I	GCGC	2 cut(s)	135, 243
HinP1I	GCGC	2 cut(s)	135, 243
HinfI	GANTC	1 cut(s)	496
HpaII	CCGG	3 cut(s)	111, 399, 597
HphI	GGTGA	1 cut(s)	245
Hpy188I	TCNGA	2 cut(s)	286, 495
Hpy188III	TCNNGA	2 cut(s)	155, 206
Hpy99I	CGWCG	2 cut(s)	44, 74
HpyAV	CCTTC	5 cut(s)	313, 322, 328, 412, 556
HpyCH4III	ACNGT	2 cut(s)	175, 383
HpyCH4V	TGCA	1 cut(s)	199
HpyF10VI	GCNNNNNNNGC	2 cut(s)	240, 264
HpyF3I	CTNAG	2 cut(s)	285, 492
Hsp92I	GRCGYC	2 cut(s)	234, 243
Hsp92II	CATG	3 cut(s)	158, 203, 574
HspAI	GCGC	2 cut(s)	135, 243
KasI	GGCGCC	1 cut(s)	242
KspI	CCGCGG	1 cut(s)	123
Kzo9I	GATC	4 cut(s)	57, 435, 567, 579
LguI	GCTCTTC	2 cut(s)	286, 540
Lsp1109I	GCAGC	3 cut(s)	336, 415, 435
MaeI	CTAG	3 cut(s)	276, 299, 607
MaeIII	GTNAC	2 cut(s)	203, 235
MalI	GATC	4 cut(s)	59, 437, 569, 581
MbiI	CCGCTC	1 cut(s)	258
MboI	GATC	4 cut(s)	57, 435, 567, 579
MboII	GAAGA	5 cut(s)	273, 325, 328, 557, 571
MhlI	GDGCHC	2 cut(s)	228, 552
MlsI	TGGCCA	1 cut(s)	183
MluNI	TGGCCA	1 cut(s)	183
Mly113I	GGCGCC	1 cut(s)	243
MlyI	GAGTC	1 cut(s)	490
MnlI	CCTC	6 cut(s)	134, 162, 280, 296, 300, 303
Mox20I	TGGCCA	1 cut(s)	183
MscI	TGGCCA	1 cut(s)	183
MslI	CAYNNNNRTG	1 cut(s)	210
Msp20I	TGGCCA	1 cut(s)	183
MspA1I	CMGCKG	1 cut(s)	122
MspI	CCGG	3 cut(s)	111, 399, 597
MspR9I	CCNGG	5 cut(s)	354, 400, 413, 453, 597
MvaI	CCWGG	3 cut(s)	354, 413, 453
MvnI	CGCG	1 cut(s)	122
MwoI	GCNNNNNNNGC	2 cut(s)	240, 264
NarI	GGCGCC	1 cut(s)	243
NciI	CCSGG	2 cut(s)	400, 597
NdeII	GATC	4 cut(s)	57, 435, 567, 579
NlaIII	CATG	3 cut(s)	158, 203, 574
NlaIV	GGNNCC	8 cut(s)	53, 83, 115, 227, 244, 361, 394, 532
NmuCI	GTSAC	2 cut(s)	203, 235
PagI	TCATGA	1 cut(s)	154
PciSI	GCTCTTC	2 cut(s)	286, 540
PfoI	TCCNGGA	1 cut(s)	595
PkrI	GCNGC	6 cut(s)	65, 124, 166, 351, 405, 450
PleI	GAGTC	1 cut(s)	490
PluTI	GGCGCC	1 cut(s)	246
PpsI	GAGTC	1 cut(s)	490
Psp6I	CCWGG	3 cut(s)	352, 411, 451
PspGI	CCWGG	3 cut(s)	352, 411, 451
PspN4I	GGNNCC	8 cut(s)	53, 83, 115, 227, 244, 361, 394, 532
PspPI	GGNCC	1 cut(s)	393
RsaI	GTAC	4 cut(s)	23, 47, 77, 146
RsaNI	GTAC	4 cut(s)	22, 46, 76, 145
RseI	CAYNNNNRTG	1 cut(s)	210
SacII	CCGCGG	1 cut(s)	123
SapI	GCTCTTC	2 cut(s)	286, 540
SatI	GCNGC	6 cut(s)	64, 123, 165, 350, 404, 449
Sau3AI	GATC	4 cut(s)	57, 435, 567, 579
Sau96I	GGNCC	1 cut(s)	393
SchI	GAGTC	1 cut(s)	490
ScrFI	CCNGG	5 cut(s)	354, 400, 413, 453, 597
SduI	GDGCHC	2 cut(s)	228, 552
SfoI	GGCGCC	1 cut(s)	244
Sfr303I	CCGCGG	1 cut(s)	123
SgrBI	CCGCGG	1 cut(s)	123
SinI	GGWCC	1 cut(s)	393
SmiMI	CAYNNNNRTG	1 cut(s)	210
SmlI	CTYRAG	1 cut(s)	268
SmoI	CTYRAG	1 cut(s)	268
SsiI	CCGC	7 cut(s)	61, 64, 120, 122, 165, 256, 534
SspDI	GGCGCC	1 cut(s)	242
SspMI	CTAG	3 cut(s)	276, 299, 607
StyD4I	CCNGG	5 cut(s)	352, 398, 411, 451, 595
StyI	CCWWGG	2 cut(s)	184, 190
TaaI	ACNGT	2 cut(s)	175, 383
TaqII	GACCGA	1 cut(s)	53
TauI	GCSGC	3 cut(s)	66, 125, 167
TscAI	CASTG	2 cut(s)	136, 244
TseFI	GTSAC	2 cut(s)	203, 235
TseI	GCWGC	3 cut(s)	349, 403, 448
Tsp45I	GTSAC	2 cut(s)	203, 235
TspRI	CASTG	2 cut(s)	136, 244
VpaK11BI	GGWCC	1 cut(s)	393
XcmI	CCANNNNNNNNNTGG	2 cut(s)	197, 236
XspI	CTAG	3 cut(s)	276, 299, 607

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.